Sed0023688 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAACGCAAAAAAAAAAAAAAAAATCCATTTCTCAGCGGTATATATATTTTGGTGGCCACAAGAACTCTTCAATTCCACTCCCGAAAAATCAAACTCCCTCACAAACCCTAATCATGGCCGTTTCAATACGACTCGCCCTTCTCTCCCTCGCCACGACAATCCTAATCCTCTGCTTCTTCTTCACCAGAACCGCCGCCGTCGCCTCCGCCGTCCCCGACGGCGACTCCAACGCCGTCGAAAACGCCTGCCACGGCGAGAGCTCCGACAAAGGCGACCAGTGCACGGAACAACCCTCCGGCGCTGACGACGACGAAGACGACGATTTCGATGACACCTACAAGTTCGTCGACAACGTCGCCGTGAAGCTGTCGGCGTCCGGCAGCATTTACCATTGGGTGGAGAAAGCGTGAGATTAACCGTCGTCGGAGGAAGAGCACGGCGGCGAAACCTGCCATGTTTTCTTTCTCCTTCTTCTTCGTTTGGTTAATTACTTTTATGCCCTTTTAGTTATTTCTTTCTATTTTAATTCCCTCATTTATTATCGTCTTTGGTTTTTTTTTTTTTTTTGCTTGCGGCATAAGACAATTGGTTGCTGGTGGATCTCATTGGTGT AAGAAACGCAAAAAAAAAAAAAAAAATCCATTTCTCAGCGGTATATATATTTTGGTGGCCACAAGAACTCTTCAATTCCACTCCCGAAAAATCAAACTCCCTCACAAACCCTAATCATGGCCGTTTCAATACGACTCGCCCTTCTCTCCCTCGCCACGACAATCCTAATCCTCTGCTTCTTCTTCACCAGAACCGCCGCCGTCGCCTCCGCCGTCCCCGACGGCGACTCCAACGCCGTCGAAAACGCCTGCCACGGCGAGAGCTCCGACAAAGGCGACCAGTGCACGGAACAACCCTCCGGCGCTGACGACGACGAAGACGACGATTTCGATGACACCTACAAGTTCGTCGACAACGTCGCCGTGAAGCTGTCGGCGTCCGGCAGCATTTACCATTGGGTGGAGAAAGCGTGAGATTAACCGTCGTCGGAGGAAGAGCACGGCGGCGAAACCTGCCATGTTTTCTTTCTCCTTCTTCTTCGTTTGGTTAATTACTTTTATGCCCTTTTAGTTATTTCTTTCTATTTTAATTCCCTCATTTATTATCGTCTTTGGTTTTTTTTTTTTTTTTGCTTGCGGCATAAGACAATTGGTTGCTGGTGGATCTCATTGGTGT ATGGCCGTTTCAATACGACTCGCCCTTCTCTCCCTCGCCACGACAATCCTAATCCTCTGCTTCTTCTTCACCAGAACCGCCGCCGTCGCCTCCGCCGTCCCCGACGGCGACTCCAACGCCGTCGAAAACGCCTGCCACGGCGAGAGCTCCGACAAAGGCGACCAGTGCACGGAACAACCCTCCGGCGCTGACGACGACGAAGACGACGATTTCGATGACACCTACAAGTTCGTCGACAACGTCGCCGTGAAGCTGTCGGCGTCCGGCAGCATTTACCATTGGGTGGAGAAAGCGTGA MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVENACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSIYHWVEKA Homology
BLAST of Sed0023688 vs. NCBI nr
Match: KAG6570557.1 (hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.9 bits (167), Expect = 2.7e-08 Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Sed0023688 vs. NCBI nr
Match: KAA0054503.1 (hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa] >TYK14536.1 hypothetical protein E5676_scaffold552G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 8.1e-05 Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 0
BLAST of Sed0023688 vs. NCBI nr
Match: KAG6604744.1 (hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 57.4 bits (137), Expect = 8.1e-05 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Sed0023688 vs. NCBI nr
Match: KAE8646929.1 (hypothetical protein Csa_021071 [Cucumis sativus]) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04 Identity = 46/96 (47.92%), Postives = 55/96 (57.29%), Query Frame = 0
BLAST of Sed0023688 vs. ExPASy TrEMBL
Match: A0A5D3CVV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00150 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.9e-05 Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 0
BLAST of Sed0023688 vs. ExPASy TrEMBL
Match: A0A0A0KGZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169270 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.7e-05 Identity = 46/96 (47.92%), Postives = 55/96 (57.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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