Sed0023648 (gene) Chayote v1

Overview


Name	Sed0023648
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Vesicle transport V-snare
Location	LG04: 40365490 .. 40370385 (-)
RNA-Seq Expression	Sed0023648
Synteny	Sed0023648

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGAGGTTTTCGAAGGTTACGAGCGGCAGTATTGTGAACTCTCCGCCAATGTTTCTCGGAAGTGCAACTCCTTCTCCGCCTCCGATTCAGGTACTTTCCGAATGATTTCTTTGTTCGATTTCACTTTTGTTAGGGTTAACCTGAGCTTTTGCTGCTCGGATTATGTAGATTTCATGTCTGATTTGAAGGAAGAGAGATGGAGACCTGGAATTTGGAATTTAGAATTTAGAATTTGCGTTTTGTTTCTGTTGTTAGAATTTTGATGAGGATTCTTGGAATTGTGGCTGGAGATCTCGAGCTGCATGAGTAGATTTTGAAGTTTCTAATCGTAGGAATGTGTGTAGGGATGTAAAAATGGGATTAGGAGTTGGTAGCTGATCGGATTGGATTAAGCATATGGGGAATTTATGTTTCTTACCAATTCTTTAGAGCTTGGTTGCAAAATTACTTGCGAGTGCATGTCTCCCGGGGCATGGTTGCCCCTGGTATGATGGAGCGAAGCTTCGATTTTCCGGTTTCCAAAAGGAAAAATTACTTGCATGTGCAGAATTGGATTCTATTTAGGAAATGAACTGAATAGGAAGTTGAATTGTTCATCATTTGAATGAATGTTGAGGGGATATTCTTTTTGAGGTGAACGATTGGAATGGGTGCTAATTCTAGCTTGATGTTAATTGCAGAGCAGAAACACCAATGGCTTTCAGAAATCAAAGTTAGTTTGGATGAGGCTGATGTTTTGGTACGTTTGAATAGCCTTCTTTTGGCTGTAATCTAAATATCTAATGACTTTCTTTCTTTTCTTTCTGTTTTTTTTTTTGGTTGGTTAGATTCTTAATGATATGCATACTATGTTTTATCTTATCGATTTCTAGATCCGGAAAATGGACCTTGAGGCCAGAAGTTTGCAGCCAGGAGTTAAGGCTATGCTACTTGCTAAGCTACGGGAGTACAAAGCTGATCTAGGAAACCTGAAAAAGGAATTTAAGAGATTGGCATCACCGAATGCCGATCAGGCTGCTCGTGAAGAGCTGTTGGAGTCTGGAATGGCAGATACTCATCTGGTAGATCTTGATCATTCAATTCTTAATTACCTTCAAATTTAAGCATCACTAATACCTCCTTAATGATGCTCCAGGCATGAGTTGGGTTCTAAGTCTGAAATCAAATTGTGGAAACATACTAACGCAATTGAAATGACTTTCATTTTTACGATTTACCTTACCAAAAGCTTAGCGGGATCGATTTCTATCATGATATTAGTATCTAGAATTTGGTAACTTACAAGTTTTTCTTTACAACCTAATCTAGTAAGTTTAAGCAGTTGCTCTAGATTAGTTGAGAATAGAGATGGATATAAGTTGACCAAAACATTTTTGTGTTGATTGTTATTTTTTGTTACCCTGGTGTATTCTTTCAATTTTTTTTTTCTCAATGAACACTCTTTTTACTGAAGTGACGGTATTTTCTAAGTTCTGTAGACAGTTCTATCTATTCCCTTTCAATTTCCTGTGCAACTGTTGTTGGCTTTTACGTTTCAGTAACTTTTTTTTTACCTCATGTTTCAATATCTTAAACAACATATTGTTCGGCATTGTTAACTAGTGTTGATTCGTGGGCCATAGTCTGAATGAATCTCATTATCGAATACCTGCTCTAATTTTGATAATGAGAAGATGTTTGCCTTGCATAGGTTTAATTTACCATTTTTGTTATTTTTACTGTCATTCTAACAGGCTTCAGCTGATCAAAGAGACAGGATGGCAATGTCCATAGAGAGAATAAATCAGTCAGGGGAAAGAATCACCGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGTGAAACTCTCCTTCACTCCCATAAGAGAGTAAGTTTTTGTTAAGACACTAATAATCTTAACAAGCATAAGAGAACTAATATCGAAATGATGATAAACGGAACACATTGATAATAGATAGATATTACAATACCGTACCCTTAGCCTTTCGAGAGGGCTAAGTCTCTCCCAATAGCCTATTGAGAAGGCTTCACTCTCCCAACTTGTTGAACAAGACAACAAGACAACAAGACAACAATACCAAAATATTTTCCTCCCTTTCCAAATACTCTAAGGGGCTGTTTGTTTGACATATTTAGGTAGTTTTTAGGTTAAGGAGTTATATTAAGAAGTTATATTGAGGAGTTAAAAATTGAGAATTGTGTCAAAAACTCTTTTGAATGTAGTTTTTGTATAGAGGTGTTAAAAGTCAAAATCTTGTTTGGATGAAGATTTGAAAATGAGTAGTTATTTTTAGTAGTTAAAAAAGAAATGATTAAAAATGAATGGTTAAAAATGAGTTATTTTGATTGATTTGAAAGGAATGATTAAAAATAAGTTGTTAGAAATGATTAAGTAGTTATAAGTGAATGATTAAAAATGAATGGTTAGAAATGAGAGTTATTTTTAAAAGTTAAAATGAGGAAGAATTAATAAAAACTCGTTTGGATGTAGGTTTTTTAGGAGGAGTTAATAACTCCTACCTAAATATGTCAAACAAACAGCCCCTAAGACTCCTATTTATAATAAAACTCTTACATGCTAATTACTATTTTACCCTTACATATAATATATTCATCCTACCCTTAATACTCTATCATATCTTTCATCGTGAAATACACCTTGTCCTCAAGGTGTGGGTTGTACAACACATTACAAAAAAAAAAAAAAAAAATTATCCCATTGTACAACAAATTAAAATGCAGATTTTTTTTTTTTTTTTTTACAACTTACCCCAACAAAATAACAAATTATAATAATAATAACACTCCCTTTTTTTAAATGGCTTCCAAATCCACATCCTTCTTGCACAAAATAGACATCTTGTCCCATCCACAAAATGTCACATCACCATTTCTATCAAAAGGTCACACCTCAATTAATACTCCCCATTTCCTCCTTATTTCATTCCTTCCTTTACGTATCCATCTTTTTCTTCTTCTTTTTAATTTATTTTTTTTACAACCCTTCTTTTCCAAATTGTAGTACTTTTTTTTTTCCTCTCTTTTTTCCAGAACTTCATCCTCTTCCCCAAACCCTTCTTCTTCCTTCTCAAAATTTTCTTCTCCATTACTAACACATGAGACTTCTTCCTCGACCCTCTCAACCTACGTCGTCGAACACAATATCGAACACCACCCCTCGAATTTCCAAGTAGGTCTCCTCTCAGCCGCTTCTTTTTTGTTCGTGGTCTTGTCTTCCTCCCTTGACGTCTTCCACTCCTCTTGCCCGTTCTCTTCCGCTTCTTTTTCTTATCCTTTTGCTTTTTATTCTGTTTTTGGGCCATGTTGTTGCTGATTTTAGGTTCCTTCCGGTCATCATCTACCTCTTTTCTTGTGTTCGCTTCTCTTTTTGCCTTCCGTTGGTTATGAATCTCCCACTGTCTTTCTATTTTCTTCAAATCTTCTTGTAGTGCCTTGACAACTTGCTTCATTTCTTCCCACCTTTCAATTTGTTTGGTCATAGAGGCGTGTATCTTCCACAAGGCTTCCTCACGATCCATTGCTTATGGTTGCCCGAGGAAAGAACTTGCTCTGATACCAATTTGTTAAGACACTAATAATCTTAACAAGCATAAGAGAACTAATATCGAAATGATGATAAACGAAACACACGAGAACACTATATTGATAATAGATAGAGATTACAATACCGTACGCTTAGCCTTTCGAGAGGGCTACACTCTCCCAACTTGTTGAAGAAGACAACAAGACAACAATACCAAAATATTTTCCTCACTTTCCAAATACAACTCCTATTTGTAATAAAAACTTTTACATGCTAATTACTATTCTACCCTTACATATAATATACCCGTCCTACCCTTAGTACTCTATCAGTTTTTTTCCTTGATATTATTGTTCTTGCTTTTTTATAAAAAACGATTTCATTGATGTATGAAATTACAAAAGATTCGGGAAGAAGTATGATCAAAAGATCTGTTGGAGATACCCACCATGGGCAAGTCCTCTCAATACCAATTGGTTTTGAGGTGGAACCTCATGTTATTTAATATGGTATCAAAGCTTCTTGTGAGTTATTGGTCTCTCAAATTTCAATCCAATTCAAATGCTTAAAAATCTAAGTGGGTTTTGAACCCCACCCACGTGGGCATAAGCTTAAATGGGTATTTGATCTCCCAAAGCGGGTATTTCAATCCACAAATTCAAATTTGATTCAAGATGGTCTTCCCTATACAGCACCATAAGGGATATGTTGGAGATACTCATTTTGTCGTCATTGTCCCACATTGAAAAGGTGAGAAGTCTTCCACATCTTTATAAGAGATATAGGCTATTCTCCTTAGTTTTGAGATGGAACACCACCTTATCTTAAGGTGAGAATTACAAAAGGTCTCTCTAATTAGCTTGAAGCGTGGTGTGACTATAGTTATGAAACATGAGGAATGTTTAATTCGCCACCATTAAGCCAGTATCTTCGATAAAATTGTAAAAAGATGTAAGATCGATGATTCCACTCTTGCTAGATATTCCGAAAATTACTTCTTCTTAACTCCAAGAGAGTAGTTAGGAAGTTCATAGTCATTACCTCACCCATTACTCCCAAGTGAAGCTCTTTTTTTAAAGCCATTAACATCCTTCGATTCAACTCATTTTAATTTCTATCCTTTTCCATCCTTGGGATTTGTTAACAACATGGTTCATGTTGCAGCTTCATGGGGTGGATGATGCCATTGATAAGAGTAAAAAAGTTTTGACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATTGTTGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTCATAATATATCTTAAGCTCTAA

mRNA sequence

ATGAGCGAGGTTTTCGAAGGTTACGAGCGGCAGTATTGTGAACTCTCCGCCAATGTTTCTCGGAAGTGCAACTCCTTCTCCGCCTCCGATTCAGAGCAGAAACACCAATGGCTTTCAGAAATCAAAGTTAGTTTGGATGAGGCTGATGTTTTGATCCGGAAAATGGACCTTGAGGCCAGAAGTTTGCAGCCAGGAGTTAAGGCTATGCTACTTGCTAAGCTACGGGAGTACAAAGCTGATCTAGGAAACCTGAAAAAGGAATTTAAGAGATTGGCATCACCGAATGCCGATCAGGCTGCTCGTGAAGAGCTGTTGGAGTCTGGAATGGCAGATACTCATCTGGCTTCAGCTGATCAAAGAGACAGGATGGCAATGTCCATAGAGAGAATAAATCAGTCAGGGGAAAGAATCACCGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGTGAAACTCTCCTTCACTCCCATAAGAGACTTCATGGGGTGGATGATGCCATTGATAAGAGTAAAAAAGTTTTGACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATTGTTGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTCATAATATATCTTAAGCTCTAA

Coding sequence (CDS)

ATGAGCGAGGTTTTCGAAGGTTACGAGCGGCAGTATTGTGAACTCTCCGCCAATGTTTCTCGGAAGTGCAACTCCTTCTCCGCCTCCGATTCAGAGCAGAAACACCAATGGCTTTCAGAAATCAAAGTTAGTTTGGATGAGGCTGATGTTTTGATCCGGAAAATGGACCTTGAGGCCAGAAGTTTGCAGCCAGGAGTTAAGGCTATGCTACTTGCTAAGCTACGGGAGTACAAAGCTGATCTAGGAAACCTGAAAAAGGAATTTAAGAGATTGGCATCACCGAATGCCGATCAGGCTGCTCGTGAAGAGCTGTTGGAGTCTGGAATGGCAGATACTCATCTGGCTTCAGCTGATCAAAGAGACAGGATGGCAATGTCCATAGAGAGAATAAATCAGTCAGGGGAAAGAATCACCGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTCCAGGACTTGCATCAACAGCGTGAAACTCTCCTTCACTCCCATAAGAGACTTCATGGGGTGGATGATGCCATTGATAAGAGTAAAAAAGTTTTGACCACAATGTCTCGAAGAATCAGTCGAAATAAATGGATTGTTGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTCATAATATATCTTAAGCTCTAA

Protein sequence

MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEARSLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQRDRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL

Homology

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BLAST of Sed0023648 vs. NCBI nr
Match: XP_038889496.1 (vesicle transport v-SNARE 12-like [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102
Identity = 209/219 (95.43%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKAMLLAKLREYKADLG LKKEFKRL SPNADQAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +RM MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKRLHGVDDAID
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRLHGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVL TMSRRISRNKWIVGSVIGVLVLVIILI+YLKL
Sbjct: 181 KSKKVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 219

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BLAST of Sed0023648 vs. NCBI nr
Match: XP_022996461.1 (vesicle transport v-SNARE 12-like [Cucurbita maxima])

HSP 1 Score: 382.1 bits (980), Expect = 3.2e-102
Identity = 208/219 (94.98%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKAMLLAKLREYKADLG LKKEFKR  SPNA+QAAREELLESGMADTHLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +R+ MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRL+GVDDAID
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLYGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVL TMSRRISRNKWIVGSVIGVLVLVIILIIYLKL
Sbjct: 181 KSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Sed0023648 vs. NCBI nr
Match: XP_023528822.1 (vesicle transport v-SNARE 12-like [Cucurbita pepo subsp. pepo] >KAG7030705.1 Vesicle transport v-SNARE 12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 207/219 (94.52%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKAMLLAKLREYKADLG LKKE KR  SPNA+QAAREELLESGMADTHLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKELKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +R+ MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRL+GVDDAID
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLYGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVL TMSRRISRNKWIVGSVIGVLVLVIILIIYLKL
Sbjct: 181 KSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Sed0023648 vs. NCBI nr
Match: KAG6600036.1 (ARF guanine-nucleotide exchange factor GNOM, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 207/219 (94.52%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1    MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
            MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1572 MSEVFEGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 1631

Query: 61   SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
            SLQPGVKAMLLAKLREYKADLG LKKE KR  SPNA+QAAREELLESGMADTHLASADQR
Sbjct: 1632 SLQPGVKAMLLAKLREYKADLGKLKKELKRFTSPNANQAAREELLESGMADTHLASADQR 1691

Query: 121  DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
            +R+ MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRL+GVDDAID
Sbjct: 1692 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLYGVDDAID 1751

Query: 181  KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
            KSKKVL TMSRRISRNKWIVGSVIGVLVLVIILIIYLKL
Sbjct: 1752 KSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 1790

[Close]

BLAST of Sed0023648 vs. NCBI nr
Match: XP_008461698.1 (PREDICTED: vesicle transport v-SNARE 12-like [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 206/219 (94.06%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSF+ASDSEQK QWLSEIKVSLDEA+VLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKAMLLAKLREYK DLG LKKEFKRL SPNADQAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKTDLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +RM MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKRLHGVDDAID
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRLHGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILI+Y KL
Sbjct: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILILYFKL 219

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BLAST of Sed0023648 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 285.8 bits (730), Expect = 4.1e-76
Identity = 155/220 (70.45%), Postives = 186/220 (84.55%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSA-SDSEQKHQWLSEIKVSLDEADVLIRKMDLEA 60
           MS+VFEGYERQYCELS N+SRKC+S S  S+ E+K   ++EIK  +DEADVLIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQ 120
           RSLQP  KA+ L+KLREYK+DL  LKKEFKR++S +A  ++REEL+ESGMAD H  SADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RDRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAI 180
           R R+AMS+ER++QS +RI ESRR MLETEE+G+SI+QDL QQR+TLLH+H +LHGVDDAI
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 DKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           DKSKKVLT MSRR++RNKWI+ SVI  LVL IILII  KL
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

[Close]

BLAST of Sed0023648 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.4e-68
Identity = 138/219 (63.01%), Postives = 175/219 (79.91%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+ FE YERQYCE+SAN+S+KC S  A D EQK Q LSEIK  ++EA+ L++KMDLEAR
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           +L P VK+ LL KLREYK+DL N K E KR+ S N +  AR+ELLE+GMADT  ASADQR
Sbjct: 61  NLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
            R+ MS + + ++ +RI +SRRT+LETEELGVSILQDLH QR++LL +H+ LHGVDD + 
Sbjct: 121 SRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVG 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKK+LTTM+RR++RNKW +G++I VLVL II I+Y KL
Sbjct: 181 KSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 219

[Close]

BLAST of Sed0023648 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 3.5e-67
Identity = 134/219 (61.19%), Postives = 176/219 (80.37%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+VF+GYERQYCELSA++S+KC+S  + D EQK Q LSEIK  L+ A+VLIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           +L P +K+ LL KLRE+K+DL N K E KR+ S   + AAR+ELLE+GMADT  ASADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
            R+ MS ER+ ++ +R+ +SRRTM+ETEE+GVSILQDLH QR++LL +H+ LHGVDD I 
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKK+LT M+RR+++NKW +G++I  L+  I +I+Y KL
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of Sed0023648 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-22
Identity = 69/214 (32.24%), Postives = 123/214 (57.48%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS  FEGYE+ +  L+A ++ K         ++K Q ++ ++  L+EA  L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
            + P  + M   ++R YK ++G L+ +FKR     +D+  R ELL     D   +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDE-VRNELL----GDDGNSSENQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
             +  + ER+ +S  R+    +  +ETE++G  +L++L   RE +  + +RL   D  + 
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLG 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILI 215
           KS ++LT M RRI +N+ I+  ++G++V++ IL+
Sbjct: 181 KSSRILTGMLRRIIQNR-ILLVILGIIVVITILM 208

[Close]

BLAST of Sed0023648 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-22
Identity = 69/213 (32.39%), Postives = 121/213 (56.81%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS  FEGYE+ +  L+A ++ K         ++K Q ++ ++  L+EA  L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
            + P  + M   ++R YK ++G L+ +FKR     +D+  R ELL     D   +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDE-VRNELL----GDAGNSSENQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
             +  + ER+ +S  R+    +  +ETE++G  +L++L   RE +  +  RL   D  + 
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLG 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIIL 214
           KS ++LT M RRI +N+ I+  ++G++V++ IL
Sbjct: 181 KSSRILTGMLRRIIQNR-ILLVILGIIVVIAIL 207

[Close]

BLAST of Sed0023648 vs. ExPASy TrEMBL
Match: A0A6J1K4T5 (vesicle transport v-SNARE 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491702 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 208/219 (94.98%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKAMLLAKLREYKADLG LKKEFKR  SPNA+QAAREELLESGMADTHLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +R+ MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRL+GVDDAID
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLYGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVL TMSRRISRNKWIVGSVIGVLVLVIILIIYLKL
Sbjct: 181 KSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Sed0023648 vs. ExPASy TrEMBL
Match: A0A1S3CFT2 (vesicle transport v-SNARE 12-like OS=Cucumis melo OX=3656 GN=LOC103500237 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.7e-102
Identity = 206/219 (94.06%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSF+ASDSEQK QWLSEIKVSLDEA+VLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKAMLLAKLREYK DLG LKKEFKRL SPNADQAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKTDLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +RM MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKRLHGVDDAID
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRLHGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILI+Y KL
Sbjct: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILILYFKL 219

[Close]

BLAST of Sed0023648 vs. ExPASy TrEMBL
Match: A0A6J1FWM6 (vesicle transport v-SNARE 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448046 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 206/219 (94.06%), Postives = 211/219 (96.35%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVF+GYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKAMLLAKLREYKADLG LKKE KR  SPNA+QAAREELLESGMADTHLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKELKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +R+ MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRL+GVDDAID
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLYGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVL TMSRRISRNKWIVGSVIGVLVLVIILIIYLKL
Sbjct: 181 KSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Sed0023648 vs. ExPASy TrEMBL
Match: A0A0A0KLX2 (PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182770 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100
Identity = 203/219 (92.69%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS VFEGYERQYCELSANVSRK NSF+ASDSEQK QWLSEIKVSLDEA+VLIRKMDLEAR
Sbjct: 1   MSTVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQPGVKA LLAKLREYKADLG LKKEFKRL +PNADQAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKATLLAKLREYKADLGKLKKEFKRLTTPNADQAAREELLESGMADAHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +RM MSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKRLHGVDDAID
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRLHGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKKVLTTMSRRISRNKWIVGSVIGVLVLVII+I+Y KL
Sbjct: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIIIILYFKL 219

[Close]

BLAST of Sed0023648 vs. ExPASy TrEMBL
Match: A0A6J1CB35 (vesicle transport v-SNARE 12-like OS=Momordica charantia OX=3673 GN=LOC111009979 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-98
Identity = 199/219 (90.87%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+VFEGYERQYCELSANVSRKCNSFSASDSEQK Q +SEIK SLDEADVLIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANVSRKCNSFSASDSEQKQQRVSEIKASLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           SLQP VKAMLLAKLREYK+DLG LKKEFKRL SPNADQAAREELLESGMADTHLASADQR
Sbjct: 61  SLQPSVKAMLLAKLREYKSDLGKLKKEFKRLTSPNADQAAREELLESGMADTHLASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
           +RM MSIER+NQS ERI ESRRTMLETE+LGVSIL+DLHQQRETLLHSHKRLHGVDDAID
Sbjct: 121 ERMTMSIERMNQSSERIAESRRTMLETEDLGVSILEDLHQQRETLLHSHKRLHGVDDAID 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSK+VL +MSRRISRNKWIVGSVIGVLVLVIILI+YLKL
Sbjct: 181 KSKRVLNSMSRRISRNKWIVGSVIGVLVLVIILILYLKL 219

[Close]

BLAST of Sed0023648 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 285.8 bits (730), Expect = 2.9e-77
Identity = 155/220 (70.45%), Postives = 186/220 (84.55%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSA-SDSEQKHQWLSEIKVSLDEADVLIRKMDLEA 60
           MS+VFEGYERQYCELS N+SRKC+S S  S+ E+K   ++EIK  +DEADVLIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQ 120
           RSLQP  KA+ L+KLREYK+DL  LKKEFKR++S +A  ++REEL+ESGMAD H  SADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RDRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAI 180
           R R+AMS+ER++QS +RI ESRR MLETEE+G+SI+QDL QQR+TLLH+H +LHGVDDAI
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 DKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           DKSKKVLT MSRR++RNKWI+ SVI  LVL IILII  KL
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

[Close]

BLAST of Sed0023648 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 256.1 bits (653), Expect = 2.5e-68
Identity = 134/219 (61.19%), Postives = 176/219 (80.37%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+VF+GYERQYCELSA++S+KC+S  + D EQK Q LSEIK  L+ A+VLIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQR 120
           +L P +K+ LL KLRE+K+DL N K E KR+ S   + AAR+ELLE+GMADT  ASADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 DRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAID 180
            R+ MS ER+ ++ +R+ +SRRTM+ETEE+GVSILQDLH QR++LL +H+ LHGVDD I 
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 KSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           KSKK+LT M+RR+++NKW +G++I  L+  I +I+Y KL
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of Sed0023648 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 201.1 bits (510), Expect = 9.5e-52
Identity = 106/168 (63.10%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 52  IRKMDLEARSLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMAD 111
           ++KMDLEAR+L P VK+ LL KLREYK+DL N K E KR+ S N +  AR+ELLE+GMAD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 112 THLASADQRDRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKR 171
           T  ASADQR R+ MS + + ++ +RI +SRRT+LETEELGVSILQDLH QR++LL +H+ 
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

Query: 172 LHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           LHGVDD + KSKK+LTTM+RR++RNKW +G++I VLVL II I+Y KL
Sbjct: 146 LHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 193

[Close]

BLAST of Sed0023648 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-50
Identity = 105/165 (63.64%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 55  MDLEARSLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHL 114
           MDLEAR+L P VK+ LL KLREYK+DL N K E KR+ S N +  AR+ELLE+GMADT  
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 115 ASADQRDRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHG 174
           ASADQR R+ MS + + ++ +RI +SRRT+LETEELGVSILQDLH QR++LL +H+ LHG
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHG 120

Query: 175 VDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 220
           VDD + KSKK+LTTM+RR++RNKW +G++I VLVL II I+Y KL
Sbjct: 121 VDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 165

[Close]

BLAST of Sed0023648 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-32
Identity = 82/190 (43.16%), Postives = 124/190 (65.26%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKCN-SFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEA 60
           MS VF  Y++QY ELS N+S+KC+ +FS    E+K + LSEI   L+ A+ LI KMD  A
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEK-LSEITYDLENAEKLISKMDHAA 60

Query: 61  RSLQPGVKAMLLAKLREYKADLGNLKKEFKRLASPNADQAAREELLESGMADTHLASADQ 120
            +L P +K++LL KL+E K+ L  L+ E KR  S N     REE+LE+  AD     ADQ
Sbjct: 61  SNLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQ 120

Query: 121 RDRMAMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKRLHGVDDAI 180
           R R+  S E + ++ E I +S+R +LETE +G+SIL++L +Q+E+L +S   LH +DD +
Sbjct: 121 RSRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQAMLHEIDDTV 180

Query: 181 DKSKKVLTTM 190
            +S+ ++ ++
Sbjct: 181 KESRSIVRSI 185

The following BLAST results are available for this feature:

BLAST of Sed0023648 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889496.1	1.1e-102	95.43	vesicle transport v-SNARE 12-like [Benincasa hispida]	[more]
XP_022996461.1	3.2e-102	94.98	vesicle transport v-SNARE 12-like [Cucurbita maxima]	[more]
XP_023528822.1	1.6e-101	94.52	vesicle transport v-SNARE 12-like [Cucurbita pepo subsp. pepo] >KAG7030705.1 Ves...	[more]
KAG6600036.1	1.6e-101	94.52	ARF guanine-nucleotide exchange factor GNOM, partial [Cucurbita argyrosperma sub...	[more]
XP_008461698.1	1.6e-101	94.06	PREDICTED: vesicle transport v-SNARE 12-like [Cucumis melo]	[more]

BLAST of Sed0023648 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEL5	4.1e-76	70.45	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
Q9LVP9	2.4e-68	63.01	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	3.5e-67	61.19	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
Q96AJ9	3.4e-22	32.24	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]
O89116	3.4e-22	32.39	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]

BLAST of Sed0023648 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K4T5	1.6e-102	94.98	vesicle transport v-SNARE 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491702 PE...	[more]
A0A1S3CFT2	7.7e-102	94.06	vesicle transport v-SNARE 12-like OS=Cucumis melo OX=3656 GN=LOC103500237 PE=3 S...	[more]
A0A6J1FWM6	1.7e-101	94.06	vesicle transport v-SNARE 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448046 ...	[more]
A0A0A0KLX2	2.5e-100	92.69	PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182770 PE=3 SV=...	[more]
A0A6J1CB35	1.0e-98	90.87	vesicle transport v-SNARE 12-like OS=Momordica charantia OX=3673 GN=LOC111009979...	[more]

BLAST of Sed0023648 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26670.1	2.9e-77	70.45	Vesicle transport v-SNARE family protein	[more]
AT5G39510.1	2.5e-68	61.19	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	9.5e-52	63.10	vesicle transport V-snare 13	[more]
AT3G29100.2	1.4e-50	63.64	vesicle transport V-snare 13	[more]
AT5G39630.1	1.7e-32	43.16	Vesicle transport v-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 128..192 e-value: 2.7E-22 score: 78.8
None	No IPR available	GENE3D	1.20.5.110		coord: 117..197 e-value: 3.9E-24 score: 86.6
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 1..219
None	No IPR available	PANTHER	PTHR21230:SF66	VESICLE TRANSPORT V-SNARE 12	coord: 1..219
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 128..188 e-value: 2.62984E-20 score: 79.11
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 130..189
IPR027027	GOSR2/Membrin/Bos1	PIRSF	PIRSF028865	Membrin-2	coord: 2..218 e-value: 1.7E-14 score: 52.1
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 12..90 e-value: 3.2E-23 score: 81.9
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 1..99 e-value: 2.5E-29 score: 103.4
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 6..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023648.1	Sed0023648.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990019	protein storage vacuole organization
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding