
Sed0023644 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCCTATAAATACCCATAGCCAATTGCGAAATTAGGGTTTCTTCTGTCGTAAAAAAGAGCTTACTGTAATCTCCAACGCCATGACTGCTCAGACTCAAGAAGAGCTTCTCGCCGCTCAGTTGGAGGAGCAAAAGATCAATGTAATCTCTATATTTCCATTTATTTCATGCATTTTCGTTTCTAGAACTGAAAGATTTGCTGATAAGAACTCACTTTGAAACTGTTTCTTTAACTCTAGTGTTGGTAGTGATTTTGTAGTAGTTTGAAATCAGCTAAAATGATGGATTTTCTTGTTTTTAACATATTTTATGGCTTGGGTCAATTTGTTCATCCATTGTTTGGTTTGCTGTTTTGAAATTCCAGTACTTAAAGTGTCCGAAAGGTGTTGCGCAGGGGTTGTAGACTTGGGCTTTGAACATTGTACTTTGTTTATGTATATTGTATGACTAATTTGATTATAACAAAAAAAAAAATATTTGCATATATTGATGAACCCGATGACTCTATTTATTGGGTTGGTCCAAAAATTGTTCGGAGACTGGCGGATCAAAGATCTGATTTTCCGGTTTCCAAAAAAAAAATCCCAGTAATTGAAGTAATTCTCAGTTTCAAGTCTTTTAGGGTTTAGTTCTCTTGGAGGAGATTTAATTTTGGTATCTGAATCTATTACATGTATACAAATATATTCTTGTTGTTGGATCTTGTAATTTGTTACAATCTTCAGTTTTCTATGTATAAATTCATCCCCACAGAAGAGATAAATGGTTGAGTCATTATTCTTTCAATTATTGACTTCAATAGAATCAGTTTTGTTTTTTTATTCTTCTGGTGTCTAAATTAGCTTTATGAAACCATTTGGTGTGCATCTGATTGGAATGACAGAATTTTAGGATCATATTGCTGCATTTAGTTACTTACTGAGGTTGAGGATTTGACATTGCAGCCGTGCAACTGTTTTAGTTGTTAACGTTCTATGTTGATTTTCCGAAATTGAAAGTGAAAGAGTTTGTCCATATTTTTAATTATTTTTTTACTTTACATATCTAATTGGAATGAGAATTTACTTGCTACCAACTTGTAAAATTATATTTTCATGCCATTAATATTGTAGTCGGATGAACCTGTAATTGAAGAGGAGGATGACGATGATGATGAAGATGATGACAAAGATGATGATGATGTTGAAGGTAAGTAAATATTTGAATTATTAACTATCCTTGTCATGGAGTTTCTTATTAAATCCTCAAGTTCTCCATTCTTTCCTGCATTGTGCACTTAGTTTTGCAATATTTTTTGAGACTTTTCCAAATCTGATATATTCATTTGGTTAACTTTTATACATTATGTAAAAACTTGGTTAATGTAAATGGTTGAGATATATGTATTCAACTTTTTAAGGGGGTGTTTGAGGCAAGGAGAATGAAAATTAGGAGAATATGAGAGAGAGAGAGAGAGAGATTGATTATCTGTGTTTATGATTATGGGAGCCATTACTTGTCTTTGCGTTGAAGCGTGTAAATATGGGGAGAATGAACAGTGGTTATTAGAAGAATATAAAGTGTTATGGGGAGAACAAAAAGTGGTTATGATGAAATGAGGTCATGGAGTAATGATTTTTTATGGTCCTAACATGAGTAAGAGGATCATTCTCCCCATAACCATTTATATTTTCCTTCCCCCTAACACTTTCTTGGTATATGGTAAATTTTGAATGAGCTTTAGTAGCTGAATTTTAGGTTCCTTCAAGTAATTCTTTACATCTGATGCTTTCTAAGTCAATAAATGACTGAACTTGTGGGATTGTTTTAGACTCCATGTTATTTTCCCATCCATTGTCCATGGGCAGCTGGTGCAGGCCTGGGCACATAAACTTGTTTACGGAAGCCATATTATTTTATACACAAACATACTTAAGTTTTTGACAGAAATGAGATTATAAATTATAGACTTAATTTTTTTAAAAAAAAACTTTTTTTAAAGTTTGCTCTTAGTTTTAAAAATACTCTTTATTTTTCAACAGTTGTATCATCCTTGACCTTTTACATACGTATCAAAATTACCATTCGGTTAGCAATCCATTAGAATGTTGGATGAAAAATGGAAGTGGCGTTGACCTAGAATGAGTAGTGATTAAGACATTTGCCTTGATCAAATTTTAAAAAGCAACAGCCACAGATAAACTTCTCATAAAACATTTTAATGTCTTTGCTACTCTAAGGGTGTTTTTGAAACCTTTATGAAGGGTTGAAGTGTAATATTAAAACTTTTGTAAGGAGGTGAATTTCTTAGTCTTTGAGTCTCATGTGACCATGTCCTTGTATTGCACATAGCTTACTTTATCTGTAATTTGGTATATGTTTTGAGTATGGAGTTTCTTGTGGTAGGCCTCGGAGAGGCCAGTGGCAGGTCTAAACAAAGCAGAAGCGAGAAAAAGAGTCGCAAAGCAATGCTGAAACTTGGAATGAAGCCAATCCCCGGTGTGAGCCGTGTTACAGTCAAGAAGACCAAGAATGTTCGTTTTTCGATATACCCGATCTGATTTTCTAAATTGATTCTCAACCTAGATAAACCTAAACCTAATATCCATGCCATTTTCTACGCAGATTCTTTTTGTCATTTCAAAACCAGATGTCTTCAAGAGTCCTGCTTCCGATACCTACATTATTTTTGGAGAAGCAAAGATTGAAGATTTGAGCTCTCAACTACAGACCCAGGCTGCAGAGCAGTTCAAGGCTCCTGATTTGAGTAACTTGACATCAAAACTTGAGCCAGTACCTGTTGCACAAGACGATGAAGAAGTCGATGAAACTGGTGTCGAACCCAAGGACATCGAGCTAGTGATGACTCAAGCTGGGGTATCAAGACCAAGGGCCGTGAAAGCACTCAAAGCATGCAATGGCGATATCGTGACTGCCATTATGGAACTTACAAATTAATGTGAGCTATATCAGGAAGTTGTTTTTATATGAATTGTTGGGATTATTTTCCCATATGTTTTACTTGCAGAATTTAATTTGAAGTTGAGAGATTTGAATGTTATGTAATCTCTGTTTGTGCTTATCATTAGCAGGAATATTGAGGTTCACCATATTGAGAATAGAATACTTCAGACTACATGAGCCTAATGATGTGCACAATTACTCAATACAAAAACCTTGAACACTA GCTCCTATAAATACCCATAGCCAATTGCGAAATTAGGGTTTCTTCTGTCGTAAAAAAGAGCTTACTGTAATCTCCAACGCCATGACTGCTCAGACTCAAGAAGAGCTTCTCGCCGCTCAGTTGGAGGAGCAAAAGATCAATTCGGATGAACCTGTAATTGAAGAGGAGGATGACGATGATGATGAAGATGATGACAAAGATGATGATGATGTTGAAGGCCTCGGAGAGGCCAGTGGCAGGTCTAAACAAAGCAGAAGCGAGAAAAAGAGTCGCAAAGCAATGCTGAAACTTGGAATGAAGCCAATCCCCGGTGTGAGCCGTGTTACAGTCAAGAAGACCAAGAATATTCTTTTTGTCATTTCAAAACCAGATGTCTTCAAGAGTCCTGCTTCCGATACCTACATTATTTTTGGAGAAGCAAAGATTGAAGATTTGAGCTCTCAACTACAGACCCAGGCTGCAGAGCAGTTCAAGGCTCCTGATTTGAGTAACTTGACATCAAAACTTGAGCCAGTACCTGTTGCACAAGACGATGAAGAAGTCGATGAAACTGGTGTCGAACCCAAGGACATCGAGCTAGTGATGACTCAAGCTGGGGTATCAAGACCAAGGGCCGTGAAAGCACTCAAAGCATGCAATGGCGATATCGTGACTGCCATTATGGAACTTACAAATTAATGTGAGCTATATCAGGAAGTTGTTTTTATATGAATTGTTGGGATTATTTTCCCATATGTTTTACTTGCAGAATTTAATTTGAAGTTGAGAGATTTGAATGTTATGTAATCTCTGTTTGTGCTTATCATTAGCAGGAATATTGAGGTTCACCATATTGAGAATAGAATACTTCAGACTACATGAGCCTAATGATGTGCACAATTACTCAATACAAAAACCTTGAACACTA ATGACTGCTCAGACTCAAGAAGAGCTTCTCGCCGCTCAGTTGGAGGAGCAAAAGATCAATTCGGATGAACCTGTAATTGAAGAGGAGGATGACGATGATGATGAAGATGATGACAAAGATGATGATGATGTTGAAGGCCTCGGAGAGGCCAGTGGCAGGTCTAAACAAAGCAGAAGCGAGAAAAAGAGTCGCAAAGCAATGCTGAAACTTGGAATGAAGCCAATCCCCGGTGTGAGCCGTGTTACAGTCAAGAAGACCAAGAATATTCTTTTTGTCATTTCAAAACCAGATGTCTTCAAGAGTCCTGCTTCCGATACCTACATTATTTTTGGAGAAGCAAAGATTGAAGATTTGAGCTCTCAACTACAGACCCAGGCTGCAGAGCAGTTCAAGGCTCCTGATTTGAGTAACTTGACATCAAAACTTGAGCCAGTACCTGTTGCACAAGACGATGAAGAAGTCGATGAAACTGGTGTCGAACCCAAGGACATCGAGCTAGTGATGACTCAAGCTGGGGTATCAAGACCAAGGGCCGTGAAAGCACTCAAAGCATGCAATGGCGATATCGTGACTGCCATTATGGAACTTACAAATTAA MTAQTQEELLAAQLEEQKINSDEPVIEEEDDDDDEDDDKDDDDVEGLGEASGRSKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKTKNILFVISKPDVFKSPASDTYIIFGEAKIEDLSSQLQTQAAEQFKAPDLSNLTSKLEPVPVAQDDEEVDETGVEPKDIELVMTQAGVSRPRAVKALKACNGDIVTAIMELTN Homology
BLAST of Sed0023644 vs. NCBI nr
Match: XP_022154479.1 (nascent polypeptide-associated complex subunit alpha-like protein 1 [Momordica charantia]) HSP 1 Score: 324.3 bits (830), Expect = 7.2e-85 Identity = 186/200 (93.00%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of Sed0023644 vs. NCBI nr
Match: XP_022154547.1 (nascent polypeptide-associated complex subunit alpha-like protein 1 [Momordica charantia]) HSP 1 Score: 321.2 bits (822), Expect = 6.1e-84 Identity = 183/200 (91.50%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of Sed0023644 vs. NCBI nr
Match: KAE8649660.1 (hypothetical protein Csa_012507 [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 3.9e-83 Identity = 182/200 (91.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Sed0023644 vs. NCBI nr
Match: XP_004144316.2 (nascent polypeptide-associated complex subunit alpha-like protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 318.2 bits (814), Expect = 5.2e-83 Identity = 181/200 (90.50%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Sed0023644 vs. NCBI nr
Match: XP_004144317.1 (nascent polypeptide-associated complex subunit alpha-like protein 1 isoform X1 [Cucumis sativus] >XP_031740104.1 nascent polypeptide-associated complex subunit alpha-like protein 1 isoform X3 [Cucumis sativus]) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82 Identity = 181/200 (90.50%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy Swiss-Prot
Match: Q9LHG9 (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 8.0e-71 Identity = 157/198 (79.29%), Postives = 177/198 (89.39%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy Swiss-Prot
Match: Q6ICZ8 (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g13850 PE=1 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.1e-67 Identity = 158/205 (77.07%), Postives = 176/205 (85.85%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy Swiss-Prot
Match: Q9M612 (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.8e-66 Identity = 144/194 (74.23%), Postives = 171/194 (88.14%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy Swiss-Prot
Match: Q94JX9 (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2) HSP 1 Score: 219.2 bits (557), Expect = 4.3e-56 Identity = 124/191 (64.92%), Postives = 160/191 (83.77%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy Swiss-Prot
Match: Q9SZY1 (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g10480 PE=1 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53 Identity = 128/201 (63.68%), Postives = 158/201 (78.61%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy TrEMBL
Match: A0A6J1DM87 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111021750 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85 Identity = 186/200 (93.00%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy TrEMBL
Match: A0A6J1DLY9 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111021792 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.9e-84 Identity = 183/200 (91.50%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy TrEMBL
Match: A0A5D3CHB5 (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00600 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 7.3e-83 Identity = 180/200 (90.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy TrEMBL
Match: A0A1S3C1K8 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495854 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 7.3e-83 Identity = 180/200 (90.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Sed0023644 vs. ExPASy TrEMBL
Match: A0A6J1GFD6 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453434 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 2.8e-82 Identity = 180/200 (90.00%), Postives = 188/200 (94.00%), Query Frame = 0
BLAST of Sed0023644 vs. TAIR 10
Match: AT3G12390.1 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein ) HSP 1 Score: 268.1 bits (684), Expect = 5.7e-72 Identity = 157/198 (79.29%), Postives = 177/198 (89.39%), Query Frame = 0
BLAST of Sed0023644 vs. TAIR 10
Match: AT5G13850.1 (nascent polypeptide-associated complex subunit alpha-like protein 3 ) HSP 1 Score: 257.7 bits (657), Expect = 7.7e-69 Identity = 158/205 (77.07%), Postives = 176/205 (85.85%), Query Frame = 0
BLAST of Sed0023644 vs. TAIR 10
Match: AT3G49470.1 (nascent polypeptide-associated complex subunit alpha-like protein 2 ) HSP 1 Score: 219.2 bits (557), Expect = 3.0e-57 Identity = 124/191 (64.92%), Postives = 160/191 (83.77%), Query Frame = 0
BLAST of Sed0023644 vs. TAIR 10
Match: AT4G10480.1 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein ) HSP 1 Score: 211.1 bits (536), Expect = 8.3e-55 Identity = 128/201 (63.68%), Postives = 158/201 (78.61%), Query Frame = 0
BLAST of Sed0023644 vs. TAIR 10
Match: AT4G10480.2 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein ) HSP 1 Score: 209.5 bits (532), Expect = 2.4e-54 Identity = 128/200 (64.00%), Postives = 158/200 (79.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|