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Sed0023642 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGAAATGTAGAGAAGTTTGGTGAGAGAAAAGAAAAATGGAGTACGCAGAAGGCGAAGCACAGGATCCGGCCTCCCTGAGCTTCCCAGTTGGTTTGGTTCTTTTGTTGACATTTTTGTTTTGTATGTGTTGCTTTTTTTCTTGTTGCCTTCACTGGGAAAAGCTCCGATATCTGCTCGGCTGCTCCGATCATCCCGCCCACCGCAATTCTCCGCCGGTAACCGCCGCCTTCTCGCCGCCCCACAAAACTTTGCCACTCCATACGGTGTGTTTTCTTTTGTTATTTTTTATTAGAGATTTGTTTCAATCATGTGTCAAACTCGTTGTTTTATACATAAATCTCTTATATGTGTTAATTTTGTTGCCTCAACTTTTTCTTTTTGGCTATAATTTGATCTTTAAATTATTTCATAACAACATCGTGGTTTAAATTGCTCAAATTACAATTACCGATAATTTTTTTTTATATTATTGTCCAAATATTCATTATAAATTTTGAAATTTAACATTTAGGGGAGAATTTCGAATTCTAAGCGTTTTTTTTTTTCAATTTCTCAAGTTAAATGATCGATGTGAACAACGTAAACTAAATAACTTTTTTTCTTGCACTGCCTTTTTTCTTTTTTATTTATATGTTGTAAGGTGGTTTTTTATTTATTTATTTATTTATTATTATTTTTTTTAATAAGAAGATATGGAAGGAAAATCGGCCACAAAGTCTGTCAGTTTTGATGCCCGGCGACGAAGTTCCGAGGTTTATAGCAACCGCATGTCCACCGTGTGCGGCGGCGACGACGGCGGCGTTGGTGGAAGTTGTAATACAAAAACAGAGTATTCCGGACTCCTCTGGAGTTTTGTGATCTTTTCAATTAATCCCGTTTTTATGCGTAAATATATATATCTTTTTTTCTATTTATATTCAACTTAATTTTAATTCCATTTTTTTCTTTGGGATTTTCTAGCAATGTTCATGTTTTTGTCTCTATTTTGTCAGTTTAATTTTATTCTCTATAGATGACAAACAACAAGATTCC ACGAAATGTAGAGAAGTTTGGTGAGAGAAAAGAAAAATGGAGTACGCAGAAGGCGAAGCACAGGATCCGGCCTCCCTGAGCTTCCCAGTTGGTTTGGTTCTTTTGTTGACATTTTTGTTTTGTATGTGTTGCTTTTTTTCTTGTTGCCTTCACTGGGAAAAGCTCCGATATCTGCTCGGCTGCTCCGATCATCCCGCCCACCGCAATTCTCCGCCGGTAACCGCCGCCTTCTCGCCGCCCCACAAAACTTTGCCACTCCATACGATATGGAAGGAAAATCGGCCACAAAGTCTGTCAGTTTTGATGCCCGGCGACGAAGTTCCGAGGTTTATAGCAACCGCATGTCCACCGTGTGCGGCGGCGACGACGGCGGCGTTGGTGGAAGTTGTAATACAAAAACAGAGTATTCCGGACTCCTCTGGAGTTTTGTGATCTTTTCAATTAATCCCGTTTTTATGCGTAAATATATATATCTTTTTTTCTATTTATATTCAACTTAATTTTAATTCCATTTTTTTCTTTGGGATTTTCTAGCAATGTTCATGTTTTTGTCTCTATTTTGTCAGTTTAATTTTATTCTCTATAGATGACAAACAACAAGATTCC ATGGAGTACGCAGAAGGCGAAGCACAGGATCCGGCCTCCCTGAGCTTCCCAGTTGGTTTGGTTCTTTTGTTGACATTTTTGTTTTGTATGTGTTGCTTTTTTTCTTGTTGCCTTCACTGGGAAAAGCTCCGATATCTGCTCGGCTGCTCCGATCATCCCGCCCACCGCAATTCTCCGCCGGTAACCGCCGCCTTCTCGCCGCCCCACAAAACTTTGCCACTCCATACGATATGGAAGGAAAATCGGCCACAAAGTCTGTCAGTTTTGATGCCCGGCGACGAAGTTCCGAGGTTTATAGCAACCGCATGTCCACCGTGTGCGGCGGCGACGACGGCGGCGTTGGTGGAAGTTGTAATACAAAAACAGAGTATTCCGGACTCCTCTGGAGTTTTGTGA MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIATACPPCAAATTAALVEVVIQKQSIPDSSGVL Homology
BLAST of Sed0023642 vs. NCBI nr
Match: XP_038899315.1 (uncharacterized protein At5g65660-like [Benincasa hispida]) HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47 Identity = 104/133 (78.20%), Postives = 109/133 (81.95%), Query Frame = 0
BLAST of Sed0023642 vs. NCBI nr
Match: XP_008466113.1 (PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo] >KAA0038642.1 uncharacterized protein E6C27_scaffold92G001760 [Cucumis melo var. makuwa] >TYK31243.1 uncharacterized protein E5676_scaffold455G005320 [Cucumis melo var. makuwa]) HSP 1 Score: 194.5 bits (493), Expect = 5.7e-46 Identity = 101/135 (74.81%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of Sed0023642 vs. NCBI nr
Match: KAG6591711.1 (hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024594.1 hypothetical protein SDJN02_13412 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.1 bits (492), Expect = 7.4e-46 Identity = 96/125 (76.80%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of Sed0023642 vs. NCBI nr
Match: XP_022936981.1 (uncharacterized protein At5g65660-like [Cucurbita moschata]) HSP 1 Score: 194.1 bits (492), Expect = 7.4e-46 Identity = 96/125 (76.80%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of Sed0023642 vs. NCBI nr
Match: XP_023536259.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45 Identity = 96/125 (76.80%), Postives = 102/125 (81.60%), Query Frame = 0
BLAST of Sed0023642 vs. ExPASy Swiss-Prot
Match: Q9LSK9 (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.2e-10 Identity = 43/113 (38.05%), Postives = 54/113 (47.79%), Query Frame = 0
BLAST of Sed0023642 vs. ExPASy TrEMBL
Match: A0A5D3E545 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005320 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46 Identity = 101/135 (74.81%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of Sed0023642 vs. ExPASy TrEMBL
Match: A0A1S3CQS4 (uncharacterized protein At5g65660-like OS=Cucumis melo OX=3656 GN=LOC103503633 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46 Identity = 101/135 (74.81%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of Sed0023642 vs. ExPASy TrEMBL
Match: A0A6J1F906 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111443410 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.6e-46 Identity = 96/125 (76.80%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of Sed0023642 vs. ExPASy TrEMBL
Match: A0A6J1IEI5 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111476516 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45 Identity = 95/125 (76.00%), Postives = 102/125 (81.60%), Query Frame = 0
BLAST of Sed0023642 vs. ExPASy TrEMBL
Match: A0A6J1CGJ4 (uncharacterized protein At5g65660-like OS=Momordica charantia OX=3673 GN=LOC111011330 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.8e-41 Identity = 93/134 (69.40%), Postives = 101/134 (75.37%), Query Frame = 0
BLAST of Sed0023642 vs. TAIR 10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11 Identity = 43/113 (38.05%), Postives = 54/113 (47.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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