Sed0023624 (gene) Chayote v1

Overview


Name	Sed0023624
Type	gene
Organism	Sechium edule (Chayote v1)
Description	sorcin-like
Location	LG01: 4569761 .. 4573202 (+)
RNA-Seq Expression	Sed0023624
Synteny	Sed0023624

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATTTTCAATCTTACCCTTACCAAAACTAAATTGATTTTTTAATTGGGGGATAAAACAAAATCCCTTCCGTGAAGAACAAATTCCCGTGATGGTGGAATTCACAATCGAAGAGTTTCACTGAAAATGGAGAACAGCGGAGTTGTGAAGGAGTGGTTCGATCTCGTCGATTCAGACAAATCTGGAAGCATCACAGCTCCTCAGCTTCAGGTTTGGTTGATCTTCTTCTTCTCCACATCTCTTATCAATTTCATCGCAAACTCCCAATCGTTGACGAATTTTCCGTTCCTCCATGATCAGAAAGCTCTGGCCGTCGGTAACCTAAACTTCTCCCTCTCCACCGTCCAGCAAATGATCAGGTTTTCGTCCTCTCCTCTTCCTATGATCTCTATCAAGAGTTTTCTGCTGATTTTTGTGTTCTTGTTTTTGTTTTTGTTAGAATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGGTGAGTGAAAATAACATGAATACGTTCGCCTTTTTGTTTTGGGTTTGAGAAGTTGTGAAGCTGTATTGATTTTCATGAGTTTTATTGTCTATGATGCCTAATCTCTGAAATCTTTTGATGATTTAATGCATTTTTTACTCAGAGTTTGTAGTTCTCAACAAGTTCCTCCTCAAGGTTTGTATTTTGGATACACTTTCTGCCTTATGAAAGTTTTGAAAAATTGTACAGTTTCTGAAAGTTACTTTTCAAGTACCGAATGACTCTATATAATGTATTTTTTATTACCTTTTTCAGCTTCAGCAAGCCTTCTCCGACTCTGAAAGGTGATTCATAATCTCTTCTTTGGATAATTTTGATGACTACTTGATTCATTTTAAAGAAACTATTAGCTGTAAATTTCTCCAAGTTTTGCTGAATTCAATCAGCATAAAGTATAGACTAATGATGTGATTGTTGTTGAACTCAAAAAAGATTCTCGAAGATTTATACATTTGGAACCATTATTCATACAGCAGAGGCTGCTCCCTTTAAGCCAGATTGGATTACCCTTTTTTTTTATTATTATAAGAAACAAACTATTTCATTGATTAATGAAAGTGATACATTGATAGGAGAGAAAAAAGGGATATAATATAACGAATGGGAAAGAGAGGAGCCAACTACATAGGCCAATACAAAAAAGTGGGTAAAAACAAAGATTTACAACCCTATACAAATGTCTCATTTAGAGGACCCAGTTACTAGAAAAGTGAGAGGTTCACCTTGTATCAGGACACGTGGAGAAAAAACGGGTGAGCAAATTGCCCCTCATCTTCGACACGGGAGGAGGAAGGCACGATCCAGAGTTTGGGAGAGAAGCTTATAGAGAGAATGACGATTGATTTACATCCCTATATCTTCTATTGGCTGAATAATTTATACCATAAAGAACAATTACTAATTAGTCAGAAATCCCTAGCGTTTAGCTTGTTTGTATCTTGATGGATCTAAGTATGCCTTCTCTTTGTTTGTTGTTACAGAGGTCGGGGTTATCTAGTCCCAGATGATGTATACGAGGTATGTACTCTGTTTAGCTAAGTATTACCATTATATATCTATTAGGATCAATTTGGAAAGAAAAATATTCACTCTTGTTTTTTTGCATTTCAAGTTGTTTATCTGCTGAAGTATCCTTTCAGGCATTGGTTAAAATTGGCTTCACACTGGACTCTCCGGCTTTTTATACTGTCTGCGAGGTAAACCATTTTGTCATTTCAATAATGAGATAATTAAACTTTTAGTCTTATAGTTGATTCTTACTTCTTACTCATTCACTCTATATGATTGCCAATGCCAACAATATCAGTGAAAATTGCTTACATGGCGAGTTTGAATTATAAGATGGATTGTTAACAAGCAATCCCCTTCCCCTACCACTTAAAGTAGTAATCAGCAGGAACCATTCTTCCATTGGATAGTTTTTTTCCATCTCTCTCCAGTTTGTCTTTTTGGTTCTGGTTTGCTTAAGAACTAAACCCCACCTTTCTATCTATGCAAGAGATATTGATAATGAGTCGGATGAATGGGTATCTATTCTCTGCAACTATTTGGAAATCTGAACTTCTATTATTTTTCTAAATATATTTGCAGAGCTTTGATCAAAAGAAGAACGGGAGATTTCGGCTCGACGACTTCATATCTCTCTGTATATTTGTTCAATCGGCTGGGTAGGTCCTTTTGCGAGCAAATTTGCGTTTATTTTTGGATAAGAAACAATTTCATTAGTGATACGGAATTACATAGTAGAGTAAATTTGCGCATTTATGAAAGGAAAAAAAAATATTTTTTCACTTCAGATGAAATACTCCTAATTGTTAACCATAATGGATTGACTTAGTGATCAAGAGGGTTTTGGAGAACCAAAATATTATGAGATAAATCTATGGTGACCGCCTTCTTAGGAATTAATTTCCTATGACTTACACTCCCTGAGTTACAAAAAAGTAAACTCTTTGTTATTTTGGTTGGTGGATGGAAGTGGCTTCTAATCCAATTCATCTTCTCCTAGCTCCTTGAGAAGACAGACATTAATTCTTAAATTTTAGCATGTGACCTGATTTGCATTAAACCCGCATTCTTAAATCTTTCTAGCACTACTAACATTGTTTTTTTCTTTATTACCTTGAAGTTTAATTTTTTTTAATCTTCTCTGATTGGTTGCAGGAATTTGTTCAATTCCTTTGATACCGCCAAACAAGGCAGAGTGACGCTAGATCTCAACCAATTTGTCTATTGCAGTGAGTATCTGAACTATTACGAGGCCATATACTTTCATCTTTTGCCAGCATGTGTTTTAATTCATTTTCCTCGAGATATAATTAGTAGTGCTGTTATTAATGGATTTTCCAAAATGATTTTGTGCTGTTTGTTTGAGGATTAAATTGTAAGCAAAAAGACGAAGCAAGCGTAATCTTGTATTTTTGTCATCATCTGATTCACTAATTGAGATGCACAGAAATTGGCTCGAACACCCACGATACATAAATGATCATCTGATACACTAATAACACATTTAGTTTCAAGCACCTGTGTCCCAACAACTGATTTGTTTCTTCTGACTTTTCCCTTCAGCTGCCAATTGTAGGATATGAAATTGTGTAAATATTTCGACTAAGAGGGACGAGCAGCGCTTACTGCCCCAAACTTTGATGCAACCTTGTGGATCAAGCATGGTGGTGTGTATGAACTGGAAACTTATTTTTCATCCTCTTTGTTTATCTATAGATTTTAATCCCTTGTCTTTGATGCTGGAAAAAGGCTTATATTATTGGAAGAAAGTAATTCTTTTCTGTTGGTCTTCTATTTTCAACAATATTTGGTGTGAGAAATTTAATTGAGATGTATGTACTCATTCAGTTGTACGATTAGTCATTTGTATATTATTTATTTTTTTAGCTTATTATTCTTAAATATAGCATTCTAT

mRNA sequence

TAAATTTTCAATCTTACCCTTACCAAAACTAAATTGATTTTTTAATTGGGGGATAAAACAAAATCCCTTCCGTGAAGAACAAATTCCCGTGATGGTGGAATTCACAATCGAAGAGTTTCACTGAAAATGGAGAACAGCGGAGTTGTGAAGGAGTGGTTCGATCTCGTCGATTCAGACAAATCTGGAAGCATCACAGCTCCTCAGCTTCAGAAAGCTCTGGCCGTCGGTAACCTAAACTTCTCCCTCTCCACCGTCCAGCAAATGATCAGAATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGAGTTTGTAGTTCTCAACAAGTTCCTCCTCAAGCTTCAGCAAGCCTTCTCCGACTCTGAAAGAGGTCGGGGTTATCTAGTCCCAGATGATGTATACGAGGCATTGGTTAAAATTGGCTTCACACTGGACTCTCCGGCTTTTTATACTGTCTGCGAGAGCTTTGATCAAAAGAAGAACGGGAGATTTCGGCTCGACGACTTCATATCTCTCTGTATATTTGTTCAATCGGCTGGGAATTTGTTCAATTCCTTTGATACCGCCAAACAAGGCAGAGTGACGCTAGATCTCAACCAATTTGTCTATTGCACTGCCAATTGTAGGATATGAAATTGTGTAAATATTTCGACTAAGAGGGACGAGCAGCGCTTACTGCCCCAAACTTTGATGCAACCTTGTGGATCAAGCATGGTGGTGTGTATGAACTGGAAACTTATTTTTCATCCTCTTTGTTTATCTATAGATTTTAATCCCTTGTCTTTGATGCTGGAAAAAGGCTTATATTATTGGAAGAAAGTAATTCTTTTCTGTTGGTCTTCTATTTTCAACAATATTTGGTGTGAGAAATTTAATTGAGATGTATGTACTCATTCAGTTGTACGATTAGTCATTTGTATATTATTTATTTTTTTAGCTTATTATTCTTAAATATAGCATTCTAT

Coding sequence (CDS)

ATGGAGAACAGCGGAGTTGTGAAGGAGTGGTTCGATCTCGTCGATTCAGACAAATCTGGAAGCATCACAGCTCCTCAGCTTCAGAAAGCTCTGGCCGTCGGTAACCTAAACTTCTCCCTCTCCACCGTCCAGCAAATGATCAGAATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGAGTTTGTAGTTCTCAACAAGTTCCTCCTCAAGCTTCAGCAAGCCTTCTCCGACTCTGAAAGAGGTCGGGGTTATCTAGTCCCAGATGATGTATACGAGGCATTGGTTAAAATTGGCTTCACACTGGACTCTCCGGCTTTTTATACTGTCTGCGAGAGCTTTGATCAAAAGAAGAACGGGAGATTTCGGCTCGACGACTTCATATCTCTCTGTATATTTGTTCAATCGGCTGGGAATTTGTTCAATTCCTTTGATACCGCCAAACAAGGCAGAGTGACGCTAGATCTCAACCAATTTGTCTATTGCACTGCCAATTGTAGGATATGA

Protein sequence

MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI

Homology

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BLAST of Sed0023624 vs. NCBI nr
Match: XP_022140739.1 (sorcin-like isoform X2 [Momordica charantia])

HSP 1 Score: 325.1 bits (832), Expect = 3.6e-85
Identity = 156/169 (92.31%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGS+TAPQLQKALAVGNLNF LS VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSVTAPQLQKALAVGNLNFPLSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFLLKLQQAFSD ERGRG+LVP+DVYEALVKIG+TLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLLKLQQAFSDLERGRGFLVPNDVYEALVKIGYTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 169

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BLAST of Sed0023624 vs. NCBI nr
Match: XP_004139969.1 (sorcin isoform X2 [Cucumis sativus] >KGN46663.1 hypothetical protein Csa_005521 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 4.7e-85
Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGSITAPQLQ ALAVGNLNF  S VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSITAPQLQNALAVGNLNFPHSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFLLKLQQAFSD ERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLLKLQQAFSDLERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSAGN+FNSFDTAKQGRVTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSAGNMFNSFDTAKQGRVTLDLNQFVYCTANCRI 169

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BLAST of Sed0023624 vs. NCBI nr
Match: XP_016900564.1 (PREDICTED: sorcin-like [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS  SGSITAPQLQ ALAVGNLNF  S VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSANSGSITAPQLQNALAVGNLNFPHSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFLLKLQQAFSD ERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLLKLQQAFSDLERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSAGNLFNSFDTAKQG+VTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGKVTLDLNQFVYCTANCRI 169

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BLAST of Sed0023624 vs. NCBI nr
Match: XP_022943751.1 (sorcin-like [Cucurbita moschata] >XP_022986228.1 sorcin-like [Cucurbita maxima] >KAG6570981.1 hypothetical protein SDJN03_29896, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.5 bits (820), Expect = 8.9e-84
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGSI APQLQ ALAVGNLNF LS VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFL+KLQQAFSD ERGRGYLVP+DVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLIKLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSA NLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 169

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BLAST of Sed0023624 vs. NCBI nr
Match: XP_011656916.1 (sorcin isoform X1 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 157/173 (90.75%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGSITAPQLQ ALAVGNLNF  S VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSITAPQLQNALAVGNLNFPHSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFLLKLQQAFSD ERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLLKLQQAFSDLERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYC----TANCRI 170
           GRFRLDDFISLCIFVQSAGN+FNSFDTAKQGRVTLDLNQFVYC    TANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSAGNMFNSFDTAKQGRVTLDLNQFVYCSEYLTANCRI 173

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BLAST of Sed0023624 vs. ExPASy Swiss-Prot
Match: Q94743 (Sorcin OS=Schistosoma japonicum OX=6182 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.8e-16
Identity = 52/153 (33.99%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 11  FDLVDSDKSGSITAPQLQKALAVG-NLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVLNKF 70
           F  VD+DKSGSI+A +LQ +L+ G     ++ TVQ M+ M+D D NGT++F EF+ L K+
Sbjct: 12  FSRVDADKSGSISANELQTSLSNGLGTPLNIRTVQLMVAMFDRDMNGTINFNEFLGLFKY 71

Query: 71  LLKLQQAFSDSER-GRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDF 130
           +   Q  F   +R   G +  ++   AL+  G+ L SP F  +      +  G    DDF
Sbjct: 72  VQDWQTCFRRYDRDNSGSIDLNEFSNALISFGYHL-SPQFVNLMMRRFDRNRGSIAFDDF 131

Query: 131 ISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFV 162
           I  C+ +Q+    F+ +D    G       QF+
Sbjct: 132 IYACVCLQTLTREFSRYDCRGIGHTVFSFEQFL 163

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BLAST of Sed0023624 vs. ExPASy Swiss-Prot
Match: P30626 (Sorcin OS=Homo sapiens OX=9606 GN=SRI PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.9e-14
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 18  KSGSITAPQLQKAL-----AVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVLNKFLLK 77
           + G I A +LQ+ L     A G   F+L T + M+ M D D +GTM F EF  L   L  
Sbjct: 45  QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104

Query: 78  LQQAFSDSERGR-GYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISL 137
            +Q F   +  R G + P ++ +AL  +GF L   A  ++ + +    NG+   DD+I+ 
Sbjct: 105 WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIAC 164

Query: 138 CIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYC 164
           C+ +++  + F   DTA+QG V    + F+ C
Sbjct: 165 CVKLRALTDSFRRRDTAQQGVVNFPYDDFIQC 194

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BLAST of Sed0023624 vs. ExPASy Swiss-Prot
Match: Q5R4U9 (Sorcin OS=Pongo abelii OX=9601 GN=SRI PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.9e-14
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 18  KSGSITAPQLQKAL-----AVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVLNKFLLK 77
           + G I A +LQ+ L     A G   F+L T + M+ M D D +GTM F EF  L   L  
Sbjct: 45  QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104

Query: 78  LQQAFSDSERGR-GYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISL 137
            +Q F   +  R G + P ++ +AL  +GF L   A  ++ + +    NG+   DD+I+ 
Sbjct: 105 WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIAC 164

Query: 138 CIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYC 164
           C+ +++  + F   DTA+QG V    + F+ C
Sbjct: 165 CVKLRALTDSFRRRDTAQQGVVNFPYDDFIQC 194

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BLAST of Sed0023624 vs. ExPASy Swiss-Prot
Match: Q95YL5 (Penta-EF hand domain-containing protein 1 OS=Dictyostelium discoideum OX=44689 GN=pefA PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-13
Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 10  WFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVLNKF 69
           WF  +D D+SGSI+A +LQ  L VG     + T  ++IR++D D++G + F E+  L++F
Sbjct: 41  WFRSIDKDRSGSISAMELQH-LHVGYGPLGIETATKLIRVFDVDKSGQIDFYEYAALHQF 100

Query: 70  LLKLQQAFSDSERGR-GYLVPDDVYEALVKIGFTLDSPAFYTVCESF--DQKKNGRFRLD 129
           +  L   F  ++R R G +   +++ AL   GF L    F TV   F     +    +  
Sbjct: 101 INILYANFLANDRNRSGTIDAQEIHRALGTSGFNL---PFNTVNLLFLKASPRGYGLKFS 160

Query: 130 DFISLCIFVQSAGNLFNSFDTAKQGRVTLDLN 159
           DF+ LC  +  A +LF + D  + G   L++N
Sbjct: 161 DFLGLCASIAIARSLFEAHDRMRTGVAHLNVN 188

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BLAST of Sed0023624 vs. ExPASy Swiss-Prot
Match: P05044 (Sorcin OS=Cricetulus griseus OX=10029 GN=SRI PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-13
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 18  KSGSITAPQLQKAL-----AVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVLNKFLLK 77
           + G I A +LQ+ L     A G   F+L T + M+ M D D +GTM F EF  L   L  
Sbjct: 45  QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104

Query: 78  LQQAF--SDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFIS 137
            +Q F   DS+R  G + P ++ +AL  +GF L+     ++ + +    +G+   DD+I+
Sbjct: 105 WRQHFISFDSDRS-GTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIA 164

Query: 138 LCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYC 164
            C+ +++  + F   D+A+QG V    + F+ C
Sbjct: 165 CCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQC 194

[Close]

BLAST of Sed0023624 vs. ExPASy TrEMBL
Match: A0A6J1CGJ0 (sorcin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011328 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 156/169 (92.31%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGS+TAPQLQKALAVGNLNF LS VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSVTAPQLQKALAVGNLNFPLSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFLLKLQQAFSD ERGRG+LVP+DVYEALVKIG+TLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLLKLQQAFSDLERGRGFLVPNDVYEALVKIGYTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Sed0023624 vs. ExPASy TrEMBL
Match: A0A0A0KAX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118890 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGSITAPQLQ ALAVGNLNF  S VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSITAPQLQNALAVGNLNFPHSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFLLKLQQAFSD ERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLLKLQQAFSDLERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSAGN+FNSFDTAKQGRVTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSAGNMFNSFDTAKQGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Sed0023624 vs. ExPASy TrEMBL
Match: A0A1S4DX56 (sorcin-like OS=Cucumis melo OX=3656 GN=LOC103490457 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS  SGSITAPQLQ ALAVGNLNF  S VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSANSGSITAPQLQNALAVGNLNFPHSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFLLKLQQAFSD ERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLLKLQQAFSDLERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSAGNLFNSFDTAKQG+VTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGKVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Sed0023624 vs. ExPASy TrEMBL
Match: A0A6J1JFX0 (sorcin-like OS=Cucurbita maxima OX=3661 GN=LOC111484048 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGSI APQLQ ALAVGNLNF LS VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFL+KLQQAFSD ERGRGYLVP+DVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLIKLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSA NLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Sed0023624 vs. ExPASy TrEMBL
Match: A0A6J1FSK3 (sorcin-like OS=Cucurbita moschata OX=3662 GN=LOC111448408 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MENSGVVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSF 60
           MEN+G++KEWFD VDS+KSGSI APQLQ ALAVGNLNF LS VQQMIRMYDFDRNGTMSF
Sbjct: 1   MENTGILKEWFDRVDSEKSGSIIAPQLQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSF 60

Query: 61  EEFVVLNKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120
           EEFV LNKFL+KLQQAFSD ERGRGYLVP+DVYEALVKIGFTLDSPAFYTVCESFDQKKN
Sbjct: 61  EEFVALNKFLIKLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKN 120

Query: 121 GRFRLDDFISLCIFVQSAGNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 170
           GRFRLDDFISLCIFVQSA NLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Sbjct: 121 GRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 169

[Close]

BLAST of Sed0023624 vs. TAIR 10
Match: AT5G04870.1 (calcium dependent protein kinase 1 )

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-12
Identity = 36/132 (27.27%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 7   VKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVL 66
           +KE F+++D+DKSG IT  +L+  L     N   S +  +++  D D +GT+ ++EF+  
Sbjct: 456 LKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAA 515

Query: 67  NKFLLKLQQ------AFSDSER-GRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKK 126
              L K+++      AF+  ++ G GY+ PD++ +A  + G  ++      +    DQ  
Sbjct: 516 TLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDN 575

Query: 127 NGRFRLDDFISL 132
           +GR   ++F+++
Sbjct: 576 DGRIDYNEFVAM 585

[Close]

BLAST of Sed0023624 vs. TAIR 10
Match: AT1G18890.1 (calcium-dependent protein kinase 1 )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 39/134 (29.10%), Postives = 62/134 (46.27%), Query Frame = 0


Query: 6   VVKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVV 65
           V+K  F L+D DK G IT P+L+  L           ++ ++ + D D NG + + EFV 
Sbjct: 368 VIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVA 427

Query: 66  L--------NKFLLKLQQAFSDSERGRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQ 125
           +        N  L KL   F D + G  Y+  D++ EAL       D+     +    D 
Sbjct: 428 VIIHLQKIENDELFKLAFMFFDKD-GSTYIELDELREALADELGEPDASVLSDIMREVDT 487

Query: 126 KKNGRFRLDDFISL 132
            K+GR   D+F+++
Sbjct: 488 DKDGRINYDEFVTM 500

[Close]

BLAST of Sed0023624 vs. TAIR 10
Match: AT3G10660.1 (calmodulin-domain protein kinase cdpk isoform 2 )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 34/132 (25.76%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 7   VKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVL 66
           +K+ F ++D+D SG IT  +L+  L     N   S +  +++  D D +GT+ ++EF+  
Sbjct: 492 LKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAA 551

Query: 67  NKFLLKLQQ------AFSDSERGR-GYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKK 126
              L K+++      AFS  ++   G++ PD++ +A  + G  ++      +    DQ K
Sbjct: 552 TLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACEEFG--VEDARIEEMMRDVDQDK 611

Query: 127 NGRFRLDDFISL 132
           +GR   ++F+++
Sbjct: 612 DGRIDYNEFVAM 621

[Close]

BLAST of Sed0023624 vs. TAIR 10
Match: AT5G12180.1 (calcium-dependent protein kinase 17 )

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-10
Identity = 37/132 (28.03%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 7   VKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVL 66
           +KE F  +D+D SG+IT  +L++ LA      S   VQQ++   D D NGT+ + EF+  
Sbjct: 379 LKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAA 438

Query: 67  NKFLLKLQQ------AFSDSER-GRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKK 126
              + +L +      AF   ++   GY+  +++ +AL + G   D      +    D   
Sbjct: 439 TMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMN-DGRDIKEIISEVDGDN 498

Query: 127 NGRFRLDDFISL 132
           +GR   D+F+++
Sbjct: 499 DGRINYDEFVAM 509

[Close]

BLAST of Sed0023624 vs. TAIR 10
Match: AT5G19360.1 (calcium-dependent protein kinase 34 )

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-10
Identity = 36/132 (27.27%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 7   VKEWFDLVDSDKSGSITAPQLQKALAVGNLNFSLSTVQQMIRMYDFDRNGTMSFEEFVVL 66
           +KE F  +D+D SG+IT  +L++ LA      S   VQQ++   D D NGT+ + EF+  
Sbjct: 374 LKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAA 433

Query: 67  NKFLLKLQQ------AFSDSER-GRGYLVPDDVYEALVKIGFTLDSPAFYTVCESFDQKK 126
              + +L +      AF   ++   GY+  +++ +AL + G   D      +    D   
Sbjct: 434 TMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMN-DGRDIKEIISEVDGDN 493

Query: 127 NGRFRLDDFISL 132
           +GR   ++F+++
Sbjct: 494 DGRINYEEFVAM 504

The following BLAST results are available for this feature:

BLAST of Sed0023624 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140739.1	3.6e-85	92.31	sorcin-like isoform X2 [Momordica charantia]	[more]
XP_004139969.1	4.7e-85	92.90	sorcin isoform X2 [Cucumis sativus] >KGN46663.1 hypothetical protein Csa_005521 ...	[more]
XP_016900564.1	6.8e-84	92.31	PREDICTED: sorcin-like [Cucumis melo]	[more]
XP_022943751.1	8.9e-84	91.72	sorcin-like [Cucurbita moschata] >XP_022986228.1 sorcin-like [Cucurbita maxima] ...	[more]
XP_011656916.1	2.6e-83	90.75	sorcin isoform X1 [Cucumis sativus]	[more]

BLAST of Sed0023624 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94743	2.8e-16	33.99	Sorcin OS=Schistosoma japonicum OX=6182 PE=2 SV=1	[more]
P30626	5.9e-14	32.24	Sorcin OS=Homo sapiens OX=9606 GN=SRI PE=1 SV=1	[more]
Q5R4U9	5.9e-14	32.24	Sorcin OS=Pongo abelii OX=9601 GN=SRI PE=2 SV=1	[more]
Q95YL5	2.2e-13	32.24	Penta-EF hand domain-containing protein 1 OS=Dictyostelium discoideum OX=44689 G...	[more]
P05044	5.0e-13	31.37	Sorcin OS=Cricetulus griseus OX=10029 GN=SRI PE=1 SV=1	[more]

BLAST of Sed0023624 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGJ0	1.7e-85	92.31	sorcin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011328 PE=4 SV=1	[more]
A0A0A0KAX1	2.3e-85	92.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118890 PE=4 SV=1	[more]
A0A1S4DX56	3.3e-84	92.31	sorcin-like OS=Cucumis melo OX=3656 GN=LOC103490457 PE=4 SV=1	[more]
A0A6J1JFX0	4.3e-84	91.72	sorcin-like OS=Cucurbita maxima OX=3661 GN=LOC111484048 PE=4 SV=1	[more]
A0A6J1FSK3	4.3e-84	91.72	sorcin-like OS=Cucurbita moschata OX=3662 GN=LOC111448408 PE=4 SV=1	[more]

BLAST of Sed0023624 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04870.1	7.4e-12	27.27	calcium dependent protein kinase 1	[more]
AT1G18890.1	1.4e-10	29.10	calcium-dependent protein kinase 1	[more]
AT3G10660.1	1.4e-10	25.76	calmodulin-domain protein kinase cdpk isoform 2	[more]
AT5G12180.1	4.1e-10	28.03	calcium-dependent protein kinase 17	[more]
AT5G19360.1	9.0e-10	27.27	calcium-dependent protein kinase 34	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 42..70 e-value: 0.013 score: 24.7 coord: 6..34 e-value: 1.7 score: 15.8
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 8..64 e-value: 3.0E-8 score: 34.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 2..37 score: 10.635944
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 38..73 score: 12.086506
None	No IPR available	GENE3D	1.10.238.10		coord: 1..167 e-value: 7.6E-36 score: 125.4
None	No IPR available	PANTHER	PTHR46212	PEFLIN	coord: 5..165
None	No IPR available	PANTHER	PTHR46212:SF3	PEFLIN	coord: 5..165
None	No IPR available	CDD	cd16185	EFh_PEF_ALG-2_like	coord: 8..167 e-value: 1.59291E-74 score: 218.623
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 51..63
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 7..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023624.1	Sed0023624.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding