Sed0023592 (gene) Chayote v1

Overview


Name	Sed0023592
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Oxysterol-binding protein-related protein 4B-like
Location	LG08: 3178460 .. 3179301 (+)
RNA-Seq Expression	Sed0023592
Synteny	Sed0023592

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACCCCCGTCACGTCATATATCCAAATATATATACAAAATCCATTTTTGTAGATTTTGAATTCTTGGTTTCGAAATTATGAAAGACGAGAAAGATAACGGCGAATTTATTTTGCCGTTGAATAATCTTCCGTCAAGAAGCTCTTCCATGAGTTGTTCGTCTCGTTTGTATTACTATAGACGGACCGTTGAAGGGGTTCCGTTTCAGTGGGAGATGCAACCGGGAACCCCCAAATCGCCGCCGCTCACGGAGGCGATTCTGCCGCCGATCAGTCCTCCGCCGGCTGCCCTCAGCCTTGCCCTGCCCAAACCGACCCGGGTCAGTCTTAATAAACATTCGTTGTTTCTTTTGTTTAGGCCGTGGTGGAAGCGGCCCAAGCCCAAGTTTGGGAGGCGTTCTTGTCCGTTGGATCTGTTTGAGGATGGACGTTCCAGATTTGAGTTTATGGATTCGCCATGTCAGCCGGAATCTTCTTCTTTTTGGTCGTCGTCTTCGTCGTCTTTGTCGTCGGTGCCGGCGAATCTTCCGCCGGCGGCGGAATCTTCCGGTCACCAGCGGTTGGGGTGCGGTCCCTGGAGGATTAATCCTTGTAAAATTGCTATTGGAAGGCGGGTTTGAATTTCTTCTTATTTTTCTTAGTATATATATATTTTGTAAATAAATAAATATTTTTGCGTTCTCCTTTTTCCTTTTAAGTAAAAATATTTTTGTTTTGTGTGGTTTACTTGTTGAAAACTTGAAGTTATGGAGCTCGTAGTTATTTTTTGAATATCGGTATTTTATTTTCATAGTTCAATTATGTGTTGTTACCGGAAAATTAATTCCACGGTCACAAGTTCGAG

mRNA sequence

ACACCCCCGTCACGTCATATATCCAAATATATATACAAAATCCATTTTTGTAGATTTTGAATTCTTGGTTTCGAAATTATGAAAGACGAGAAAGATAACGGCGAATTTATTTTGCCGTTGAATAATCTTCCGTCAAGAAGCTCTTCCATGAGTTGTTCGTCTCGTTTGTATTACTATAGACGGACCGTTGAAGGGGTTCCGTTTCAGTGGGAGATGCAACCGGGAACCCCCAAATCGCCGCCGCTCACGGAGGCGATTCTGCCGCCGATCAGTCCTCCGCCGGCTGCCCTCAGCCTTGCCCTGCCCAAACCGACCCGGGTCAGTCTTAATAAACATTCGTTGTTTCTTTTGTTTAGGCCGTGGTGGAAGCGGCCCAAGCCCAAGTTTGGGAGGCGTTCTTGTCCGTTGGATCTGTTTGAGGATGGACGTTCCAGATTTGAGTTTATGGATTCGCCATGTCAGCCGGAATCTTCTTCTTTTTGGTCGTCGTCTTCGTCGTCTTTGTCGTCGGTGCCGGCGAATCTTCCGCCGGCGGCGGAATCTTCCGGTCACCAGCGGTTGGGGTGCGGTCCCTGGAGGATTAATCCTTGTAAAATTGCTATTGGAAGGCGGGTTTGAATTTCTTCTTATTTTTCTTAGTATATATATATTTTGTAAATAAATAAATATTTTTGCGTTCTCCTTTTTCCTTTTAAGTAAAAATATTTTTGTTTTGTGTGGTTTACTTGTTGAAAACTTGAAGTTATGGAGCTCGTAGTTATTTTTTGAATATCGGTATTTTATTTTCATAGTTCAATTATGTGTTGTTACCGGAAAATTAATTCCACGGTCACAAGTTCGAG

Coding sequence (CDS)

ATGAAAGACGAGAAAGATAACGGCGAATTTATTTTGCCGTTGAATAATCTTCCGTCAAGAAGCTCTTCCATGAGTTGTTCGTCTCGTTTGTATTACTATAGACGGACCGTTGAAGGGGTTCCGTTTCAGTGGGAGATGCAACCGGGAACCCCCAAATCGCCGCCGCTCACGGAGGCGATTCTGCCGCCGATCAGTCCTCCGCCGGCTGCCCTCAGCCTTGCCCTGCCCAAACCGACCCGGGTCAGTCTTAATAAACATTCGTTGTTTCTTTTGTTTAGGCCGTGGTGGAAGCGGCCCAAGCCCAAGTTTGGGAGGCGTTCTTGTCCGTTGGATCTGTTTGAGGATGGACGTTCCAGATTTGAGTTTATGGATTCGCCATGTCAGCCGGAATCTTCTTCTTTTTGGTCGTCGTCTTCGTCGTCTTTGTCGTCGGTGCCGGCGAATCTTCCGCCGGCGGCGGAATCTTCCGGTCACCAGCGGTTGGGGTGCGGTCCCTGGAGGATTAATCCTTGTAAAATTGCTATTGGAAGGCGGGTTTGA

Protein sequence

MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRFEFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

Homology

[Close]

BLAST of Sed0023592 vs. NCBI nr
Match: XP_023530969.1 (uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-55
Identity = 126/186 (67.74%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 60
           MKDEKD+ EF+LPL+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK  P TEA+
Sbjct: 1   MKDEKDDAEFVLPLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDQPYTEAV 60

Query: 61  LPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRF 120
              I+PPPAALSL  PKP R    K SLFLLFRPW K+ K K  + SC  D FEDGRSRF
Sbjct: 61  TLLITPPPAALSLRPPKPARTQ-GKQSLFLLFRPWRKQSKSK--KHSCLSDEFEDGRSRF 120

Query: 121 -------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKI 180
                  EF+ SPCQP+S    SSSSSS SS+     PAAESS H+RLGCGPWRINP +I
Sbjct: 121 GSCGSQCEFIQSPCQPKS----SSSSSSWSSL-----PAAESSAHRRLGCGPWRINPLRI 174

[Close]

BLAST of Sed0023592 vs. NCBI nr
Match: XP_023007086.1 (uncharacterized protein LOC111499680 [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-54
Identity = 123/186 (66.13%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 1   MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 60
           MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+
Sbjct: 1   MKDEKDDAEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDPPYTEAV 60

Query: 61  LPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRF 120
              I+PPPAALSL  PKP R    K SLFLLFRPW K+ K K  + SC  D FEDGR+RF
Sbjct: 61  TLLITPPPAALSLRPPKPARTH-GKQSLFLLFRPWRKQSKSK--KHSCLSDEFEDGRTRF 120

Query: 121 -------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKI 180
                  EF+ SPC+P+SSS  SS+ SSL        PAAESS H+RLGCGPWRINP +I
Sbjct: 121 GSCGSQCEFIQSPCEPKSSS--SSAWSSL--------PAAESSAHRRLGCGPWRINPLRI 173

[Close]

BLAST of Sed0023592 vs. NCBI nr
Match: KAG6587751.1 (hypothetical protein SDJN03_16316, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.2 bits (557), Expect = 2.9e-53
Identity = 122/186 (65.59%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 1   MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 60
           MKDEKD+GEF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+
Sbjct: 1   MKDEKDDGEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDPPYTEAV 60

Query: 61  LPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRF 120
              I+PPPAALSL  PKP R    K SLFLLFRPW K+ K +  + SC  D FEDGR+RF
Sbjct: 61  TLLITPPPAALSLRPPKPARTQ-GKQSLFLLFRPWRKQSKSQ--KHSCLSDEFEDGRTRF 120

Query: 121 -------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKI 180
                  EF+ S C+P+S    SSSSSS SS+     P AESS H+RLGCGPWRINP +I
Sbjct: 121 GSCGSQCEFIQSLCEPKS----SSSSSSWSSL-----PPAESSAHRRLGCGPWRINPLRI 174

[Close]

BLAST of Sed0023592 vs. NCBI nr
Match: XP_022930189.1 (uncharacterized protein LOC111436686 [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 5.0e-53
Identity = 122/186 (65.59%), Postives = 137/186 (73.66%), Query Frame = 0


Query: 1   MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 60
           MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+
Sbjct: 1   MKDEKDDAEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDPPYTEAV 60

Query: 61  LPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRF 120
              I+PPPAALSL  PKP R    K SLFLLFRPW K+ K +  + SC  D F DGR+RF
Sbjct: 61  TLLITPPPAALSLRPPKPARTH-GKQSLFLLFRPWRKQSKSQ--KHSCLSDEFGDGRTRF 120

Query: 121 -------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKI 180
                  EF+ SPC+P+SSS  SSS SSL        PAAESS H+RLGCGPWRINP +I
Sbjct: 121 GSCGSQCEFIQSPCEPKSSS--SSSWSSL--------PAAESSAHRRLGCGPWRINPLRI 173

[Close]

BLAST of Sed0023592 vs. NCBI nr
Match: KAG7021722.1 (Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.6 bits (553), Expect = 8.6e-53
Identity = 121/185 (65.41%), Postives = 137/185 (74.05%), Query Frame = 0


Query: 1   MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 60
           MKDEKD+GEF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+
Sbjct: 1   MKDEKDDGEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDPPYTEAV 60

Query: 61  LPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRF 120
              I+PPPAALSL  PKP R    K SLFLLFRPW K+ K +  + SC  D FEDGR+RF
Sbjct: 61  TLLITPPPAALSLRPPKPARTQ-GKQSLFLLFRPWRKQSKSQ--KHSCLSDEFEDGRTRF 120

Query: 121 -------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKI 179
                  EF+ S C+P+S    SSSSSS SS+     P AESS H+RLGCGPWRINP +I
Sbjct: 121 GSCGSQCEFIQSLCEPKS----SSSSSSWSSL-----PPAESSAHRRLGCGPWRINPLRI 173

[Close]

BLAST of Sed0023592 vs. ExPASy TrEMBL
Match: A0A6J1KZJ1 (uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.9e-54
Identity = 123/186 (66.13%), Postives = 138/186 (74.19%), Query Frame = 0


Query: 1   MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 60
           MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+
Sbjct: 1   MKDEKDDAEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDPPYTEAV 60

Query: 61  LPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRF 120
              I+PPPAALSL  PKP R    K SLFLLFRPW K+ K K  + SC  D FEDGR+RF
Sbjct: 61  TLLITPPPAALSLRPPKPARTH-GKQSLFLLFRPWRKQSKSK--KHSCLSDEFEDGRTRF 120

Query: 121 -------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKI 180
                  EF+ SPC+P+SSS  SS+ SSL        PAAESS H+RLGCGPWRINP +I
Sbjct: 121 GSCGSQCEFIQSPCEPKSSS--SSAWSSL--------PAAESSAHRRLGCGPWRINPLRI 173

[Close]

BLAST of Sed0023592 vs. ExPASy TrEMBL
Match: A0A6J1EQV3 (uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC111436686 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.4e-53
Identity = 122/186 (65.59%), Postives = 137/186 (73.66%), Query Frame = 0


Query: 1   MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 60
           MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+
Sbjct: 1   MKDEKDDAEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDPPYTEAV 60

Query: 61  LPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDLFEDGRSRF 120
              I+PPPAALSL  PKP R    K SLFLLFRPW K+ K +  + SC  D F DGR+RF
Sbjct: 61  TLLITPPPAALSLRPPKPARTH-GKQSLFLLFRPWRKQSKSQ--KHSCLSDEFGDGRTRF 120

Query: 121 -------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKI 180
                  EF+ SPC+P+SSS  SSS SSL        PAAESS H+RLGCGPWRINP +I
Sbjct: 121 GSCGSQCEFIQSPCEPKSSS--SSSWSSL--------PAAESSAHRRLGCGPWRINPLRI 173

[Close]

BLAST of Sed0023592 vs. ExPASy TrEMBL
Match: A0A0A0LUL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46
Identity = 110/182 (60.44%), Postives = 128/182 (70.33%), Query Frame = 0


Query: 1   MKDEKDNGE-FILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPK-SPPLTE 60
           MK+EK++ E F+LPL+N PSR+SSMS SSR +YYRRT EGVPFQWEMQPGTPK +PPLTE
Sbjct: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 60

Query: 61  AILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPLDL-FEDGR 120
            ILPPISPPPA LSL L KP R   NK  LF+LF PW K+PKPK  +  CPLDL  ++ R
Sbjct: 61  VILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNER 120

Query: 121 SRFEFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGR 180
            RF+   S C+  + S     S+          PA  SSGH RLGCGPWRINP KI +GR
Sbjct: 121 LRFDSCGSQCELMAESSCKGKSA----------PAGGSSGHWRLGCGPWRINPIKIGMGR 171

[Close]

BLAST of Sed0023592 vs. ExPASy TrEMBL
Match: A0A5D3CJV8 (Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00380 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 7.1e-37
Identity = 96/160 (60.00%), Postives = 106/160 (66.25%), Query Frame = 0


Query: 24  MSCSSRLYYYRRTVEGVPFQWEMQPGTPKS-PPLTEAILPPISPPPAALSLALPKPTRVS 83
           MS SSR +YYRRT EGVPFQWEMQPGTPKS PPLTE I PPISPPPA LSL   KP RV 
Sbjct: 1   MSRSSR-FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVV 60

Query: 84  LNKHSLFLLFRPWWK--RPKPKFGRRSCPLDLFEDG-RSRFEFMDSPCQPESSSFWSSSS 143
            NK SLF+LF PW K  +PKPK  +  CPLDL ++  R RF+   S C+  + S     S
Sbjct: 61  QNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRS 120

Query: 144 SSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV 180
           S          P  ESSG  RLGCGPWRINP KI +GRRV
Sbjct: 121 S----------PVGESSGQWRLGCGPWRINPIKIGMGRRV 149

[Close]

BLAST of Sed0023592 vs. ExPASy TrEMBL
Match: A0A5N5HD47 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_017589 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.2e-21
Identity = 84/182 (46.15%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 9   EFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPP 68
           EF+   N L + SSS+ CSSR+YY R T EGVPF WE+QPGTP++PP  EAI PPISPPP
Sbjct: 73  EFLFNRNLLRNSSSSLGCSSRVYYCRST-EGVPFNWELQPGTPRNPPKEEAI-PPISPPP 132

Query: 69  AALSLALPKP---TRVSLNKHSLFLLFRP--WWKRPKPKFGRRS--------CPLDLFED 128
           A LSL LPKP    ++  NK     L R   W K+ K K  R++        C  D  E 
Sbjct: 133 AVLSLGLPKPCIDQQLHTNKPPTSPLHRLKFWSKKNKGKQQRKNNLQHNGGLCKFDKVES 192

Query: 129 GRSRFEFMDSPCQPESSSFWSSSS--------SSLSSVPANLPPAAESSGHQRLGCGPWR 170
             S  EFM S   P +SS  SSSS        SSL S PA    +  SSGH    C PW+
Sbjct: 193 CSSDSEFMASSTSPRNSSSSSSSSFSFSKGQCSSLRSTPAR--DSFTSSGH--FSCSPWK 248

[Close]

BLAST of Sed0023592 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 22 SSMSCSSRL-YYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPT 80
          SS+S +S + YY  R  EGVPF+WEMQPGTP +    E ++PP+SPPPA LSL LPKP+
Sbjct: 10 SSISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQPRE-VVPPLSPPPAMLSLGLPKPS 67

[Close]

BLAST of Sed0023592 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 22 SSMSCSSRL-YYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPT 80
          SS+S +S + YY  R  EGVPF+WEMQPGTP +    E ++PP+SPPPA LSL LPKP+
Sbjct: 10 SSISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQPRE-VVPPLSPPPAMLSLGLPKPS 67

[Close]

BLAST of Sed0023592 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 2.0e-07
Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 4   EKDNGEFILPLNNLPSRSSSMSC---SSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAI 63
           ++D   F   L +   R SS+S    S R+YYY      VPF+WE  PGTPK P      
Sbjct: 36  KQDTATFSGKLPSTKQRFSSVSAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPT 95

Query: 64  LPPISPPPAALSLA 75
           LPP++PPP+  S +
Sbjct: 96  LPPLTPPPSHFSFS 109

The following BLAST results are available for this feature:

BLAST of Sed0023592 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530969.1	1.8e-55	67.74	uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]	[more]
XP_023007086.1	5.9e-54	66.13	uncharacterized protein LOC111499680 [Cucurbita maxima]	[more]
KAG6587751.1	2.9e-53	65.59	hypothetical protein SDJN03_16316, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930189.1	5.0e-53	65.59	uncharacterized protein LOC111436686 [Cucurbita moschata]	[more]
KAG7021722.1	8.6e-53	65.41	Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. a...	[more]

BLAST of Sed0023592 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023592 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZJ1	2.9e-54	66.13	uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680...	[more]
A0A6J1EQV3	2.4e-53	65.59	uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC1114366...	[more]
A0A0A0LUL8	1.3e-46	60.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1	[more]
A0A5D3CJV8	7.1e-37	60.00	Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX...	[more]
A0A5N5HD47	3.2e-21	46.15	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]

BLAST of Sed0023592 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	2.5e-10	59.32	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	2.5e-10	59.32	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT5G01790.1	2.0e-07	40.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 14..167
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 14..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023592.1	Sed0023592.1	mRNA