Sed0023576 (gene) Chayote v1

Overview


Name	Sed0023576
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Translationally-controlled tumor protein homolog
Location	LG12: 5193271 .. 5195753 (-)
RNA-Seq Expression	Sed0023576
Synteny	Sed0023576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTTTACAGCGATCTCCTCTCTGGTTAGATTCCTAATTCCCTTCGATTTTATGGAGTTTTTCGCCAATCTGTTGTTTTCGTTCAAGGGTTTTATGTTCTTGCTTTGGATCTATGATTTTTATGGATTTTTTTGGTTTGCTTTTGGATCTGGAATATGTTTTGCAGCAATCGATTTTTCTTTCCTGGGTTTCAATCTGTTTTGTGTTGGCCTTTTGATTGGATTTTGTTATTAGCGATTCTATACTTCGAATCTGTGTATTGTGAGATTTGTTTATTGTTGGAGTGGTGCATGGGCCAGATTAGGCTCGACTCAGGAACAATTTCCTTGCTTATTTCTTAGTTAAGAGTTTAGAGTTAAGATTTGCGTGGTGTTTATGGAAATATGGTTTCTGGTGTATATTTTTTGGATACGAACCGATTTCATTGATTCATGAAATTACCATATAGGGTATAGATTACTAGTGATCAATTAAGTGATCTCCACTAATTAAGTAAAGATTTTCACCCGGATATAACATAAGGATGATGGTGTAAAAAAAGCAGCTATATGAATCTTTGTCTGGAATAATCCTCTTGTTTTGCTCGATACAAATGTTCCAACAATAAGCCCTGATAAAGTGTTCCCATGATATCTTCTTCTCATTCTTGAATGGATGATCAAGCCTCAAGGAGAGCAAAATGGAAAGATAGAATGTGGGTCTCTATGAAGAATCAAGGGCCAGTTAAATGCAGTTCTAATAAAATTCCTAAACAATGTGGCATAGTTGCAACTGCTGAATAGGTGGAAAATAGATTTGGATTCATTCCGGAAAATAGATTCGGTTTCTGGTGGTGTATTGAAGATTGATTGCTTTTTTCTTTCCTCTTTCATTCTATGAATGAAGAAGTGGCTTTCTTGTGATTGATTGATTGATTGTGTTCTAGATGGTTTGTTGTTATTGTAGTAAAATTTATAAGTTTGATCTAGCTGTGTACTTCTTTCTCTTTATTGTTAGTGTGATAGTAATGTATGGATTCATTTTAATTTTGATATCAGGTGACGAGCTTCTCTCGGATTCGTTCCAATACAAGGAACTTGAGAATGGAATGATTTGGGAAGTTGAAGGAAAGGTTAGTAGTTTTCGTTTATTGCATTGCACTCTTTCACCTTCTTGTGTATGTGGGGACAATCTTTTACGGAAAGAAATTGTTGTATCTTAATGCTATCAAGTATCTAATTAATGAAACTAAGTGTTAACCAAACTGATGATTCAGCACTTTGCTTTACTTCTTGCATTGTTTTACTGCAGTGGGTTGTCAAAGGATCGGTTGATGTGAACATTGGTGCAAATCCTTCCGCTGAAGGTGGCGGTGAGGACGAAGGGGTTGACGACCAGGCTGTGAAGGTGGTTGACATTGTTGACACCTTTAGGCTTCAGGTAGGCATGCCTTCTGGTTAAGTGTTCAAAGATTATTTTTGAGTACTTAATTTATGGATGTGTTTGGTAGTGATCTTGAAATGTATAAAATTACTTTTGTCACAATCAAACTTCACTCCCAAACATTTCTTTAATCATTTACAATTGAATTTGATAATTATGAAAAACCAACCATTGAAATTATTATATGGAAATCGCTTTTAATATACCATATAAACAAAACAACCATTTCGAACATGACAAATCTATTTTCCTTTCCAATTTGGGGTTCCAGGAGCAACCTACCATGGACAAGAAGTCGTTCATCGCATACATCAAGAAGTATATCAAGTTGCTGACACCTAAGCTGGCAGGAGAGCAACAGGAGGCATTTAAGAAGAACATTGAGGGAGCAACTAAGTTTCTGATTCCAAGGCTCAAGGACTTCCAATTGTAAGTACATACAATTGTATGTTTATCAATTTATTTTGAACCAAAGATTTTACTTTTGCTGCAACCTTGATTTGGGCTCTCAGTTACTTGAATTACATCCTTAGAAGTAGGTCTTTTAATAATCCATTTGAAGCCAATCTGAACTGTATTCTTTAACATAGGGCACGAAATCTGACCAATTGTATGTGATCAGTTTGGTTCACTGTACATGTAGAACAATTTAACATTATAGCTTTGAGTGTTTTCCCTAAAGCTAGTTTTAGAATTTCATCATTTAAAAAAAAAAATCACCATTCTAAGCTCACCTTTACTGATACAAACACGAACAGAGTGAAGTTCATAATATGTAATAACAATTCACACATGTGAATCTGGCCTAGGGACGGGTGTGGTTACCCTTGTTTCAAAAAAAAATTAACACATGTTAATAATGTCTTAAGGGTAGAAGTTCTTTAAACTTCGGTTCTTTTTTGTTTGGACTGCTCCTAATATACTCGTGTTCTGTTGCAGCTTCGTCGGCGAGAGCATGAGTGACGATTCATCTGTGGTATTTGCATACTATAAGGAAGGAGCCACTCATCCAACATTTTTATACATTGCTCCAGGTTTGAAGGAAGTTAAATGCTGA

mRNA sequence

ATGTTGGTTTACAGCGATCTCCTCTCTGGTGACGAGCTTCTCTCGGATTCGTTCCAATACAAGGAACTTGAGAATGGAATGATTTGGGAAGTTGAAGGAAAGTGGGTTGTCAAAGGATCGGTTGATGTGAACATTGGTGCAAATCCTTCCGCTGAAGGTGGCGGTGAGGACGAAGGGGTTGACGACCAGGCTGTGAAGGTGGTTGACATTGTTGACACCTTTAGGCTTCAGGAGCAACCTACCATGGACAAGAAGTCGTTCATCGCATACATCAAGAAGTATATCAAGTTGCTGACACCTAAGCTGGCAGGAGAGCAACAGGAGGCATTTAAGAAGAACATTGAGGGAGCAACTAAGTTTCTGATTCCAAGGCTCAAGGACTTCCAATTCTTCGTCGGCGAGAGCATGAGTGACGATTCATCTGTGGTATTTGCATACTATAAGGAAGGAGCCACTCATCCAACATTTTTATACATTGCTCCAGGTTTGAAGGAAGTTAAATGCTGA

Coding sequence (CDS)

ATGTTGGTTTACAGCGATCTCCTCTCTGGTGACGAGCTTCTCTCGGATTCGTTCCAATACAAGGAACTTGAGAATGGAATGATTTGGGAAGTTGAAGGAAAGTGGGTTGTCAAAGGATCGGTTGATGTGAACATTGGTGCAAATCCTTCCGCTGAAGGTGGCGGTGAGGACGAAGGGGTTGACGACCAGGCTGTGAAGGTGGTTGACATTGTTGACACCTTTAGGCTTCAGGAGCAACCTACCATGGACAAGAAGTCGTTCATCGCATACATCAAGAAGTATATCAAGTTGCTGACACCTAAGCTGGCAGGAGAGCAACAGGAGGCATTTAAGAAGAACATTGAGGGAGCAACTAAGTTTCTGATTCCAAGGCTCAAGGACTTCCAATTCTTCGTCGGCGAGAGCATGAGTGACGATTCATCTGTGGTATTTGCATACTATAAGGAAGGAGCCACTCATCCAACATTTTTATACATTGCTCCAGGTTTGAAGGAAGTTAAATGCTGA

Protein sequence

MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKFLIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC

Homology

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BLAST of Sed0023576 vs. NCBI nr
Match: XP_022937958.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973732.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_022975167.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_023539947.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.7 bits (779), Expect = 5.0e-79
Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKELENGMIWEVEGKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPTMDKK FIAYIKK+IKLLTPKL GE+QEAFKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDFQFFVGESM DDS +VFAYY+EGAT PTFLY+AP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]

BLAST of Sed0023576 vs. NCBI nr
Match: Q2PS27.1 (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP [Cucurbita maxima] >ABC02401.1 translationally controlled tumor protein [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKELENGMIWEVEGKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPTMDKK FIAYIKK+IKLLTPKL GE+QEAFKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDF+FFVGESM DDS +VFAYY+EGAT PTFLY+AP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]

BLAST of Sed0023576 vs. NCBI nr
Match: XP_022956345.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526154.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo] >KAG6582209.1 Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018608.1 Translationally-controlled tumor protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77
Identity = 145/168 (86.31%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY+DLLSGDELLSDSF YKE+ENGMIWEV+GKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKKYIKL+TPKL GE+QEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+ +LKD QFFVGESM DDSS+VFAYYKEGAT PTFLY+APGLKEVKC
Sbjct: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]

BLAST of Sed0023576 vs. NCBI nr
Match: KAG6597527.1 (Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.7 bits (761), Expect = 6.1e-77
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLLSGDELLSDSF YKELENGMIWEVEGKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP MDKK FIAYIKK+IKLLTPKL  E+QEA KKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAMDKKQFIAYIKKFIKLLTPKLEEEKQEALKKNIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDFQFFVGESM+D+S +VFAYY+EGAT PTFLY+AP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMNDESCIVFAYYREGATDPTFLYLAPALKEVKC 168

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BLAST of Sed0023576 vs. NCBI nr
Match: XP_038878221.1 (translationally-controlled tumor protein homolog [Benincasa hispida])

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76
Identity = 141/168 (83.93%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY+DLLSGDELLSDSF YKE+ENGMIWEV+GKWVV+G++DV+IGANPSAEG G+DEGV
Sbjct: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP MDKK+ I YIKKYIK +TPKL GE+QEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPMDKKTLITYIKKYIKAVTPKLEGEKQEAFKKNIEGATKY 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+ +LKD QFFVGESM+DDSS+VFAYYKEGAT PTFLY+APGLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMADDSSIVFAYYKEGATDPTFLYLAPGLKEVKC 168

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BLAST of Sed0023576 vs. ExPASy Swiss-Prot
Match: Q2PS27 (Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=TCTP PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-81
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKELENGMIWEVEGKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPTMDKK FIAYIKK+IKLLTPKL GE+QEAFKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDF+FFVGESM DDS +VFAYY+EGAT PTFLY+AP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy Swiss-Prot
Match: Q9M5I8 (Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.6e-78
Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DL+SGDELLSDSF YKE+ENGMIWEVEGKWVVKG+VDV+IGANPSAEGGGEDEGV
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP+MDKK F++ IKKYIK LTP L GEQQEAFK  IEGA K+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKY 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P++KD QFFVGESM+DDS++VFAYYKEGAT PTFLYIAPGLKEVKC
Sbjct: 121 LLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 4.9e-77
Identity = 136/168 (80.95%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKE++NGM+WEV+GKWVV+G+VDVNIGANPSAEGGGEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+ YIK+YIK LTPKL GE QEAFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+ +LKDFQFFVGE M DDS++VFAYYK+G+  PTFLY+APGLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy Swiss-Prot
Match: Q944W6 (Translationally-controlled tumor protein homolog OS=Brassica oleracea OX=3712 GN=TCTP PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-76
Identity = 139/168 (82.74%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY+DLL+GDELLSDSF YKE+ENG++WEVEGKW  KG V+VNIGANPSAE GGEDEGV
Sbjct: 1   MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DD   KVVDIVDTFRLQEQPT DKK FIAYIKKYIKLLTPKL  EQQE FKK IEGATKF
Sbjct: 61  DDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDFQFFVGE M DDS++VFAYYKEGAT+PTFLY A GLKEVKC
Sbjct: 121 LLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy Swiss-Prot
Match: P31265 (Translationally-controlled tumor protein 1 OS=Arabidopsis thaliana OX=3702 GN=TCTP1 PE=1 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 6.0e-75
Identity = 137/168 (81.55%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKE+ENG++WEVEGKWV  G+VDVNIGANPSAE GGEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DD   KVVDIVDTFRLQEQPT DKK FIAYIKKYIKLLTPKL+ E Q  FKK IEGATKF
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+PRL DFQFFVGE M DDS++VFAYYKEG+T+PTFLY A GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy TrEMBL
Match: A0A6J1ICB3 (translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474201 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.4e-79
Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKELENGMIWEVEGKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPTMDKK FIAYIKK+IKLLTPKL GE+QEAFKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDFQFFVGESM DDS +VFAYY+EGAT PTFLY+AP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy TrEMBL
Match: A0A6J1FHH5 (translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111444190 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.4e-79
Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKELENGMIWEVEGKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQPTMDKK FIAYIKK+IKLLTPKL GE+QEAFKKNIEGATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDFQFFVGESM DDS +VFAYY+EGAT PTFLY+AP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy TrEMBL
Match: A0A6J1GXJ9 (translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111458073 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 145/168 (86.31%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY+DLLSGDELLSDSF YKE+ENGMIWEV+GKWVV+G+VDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKKYIKL+TPKL GE+QEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+ +LKD QFFVGESM DDSS+VFAYYKEGAT PTFLY+APGLKEVKC
Sbjct: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy TrEMBL
Match: Q3HVK2 (p23 tumor protein-like protein OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 139/168 (82.74%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKELENGM+WEV+GKWVV+G+VDVNIGANPSAEGGGEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+ YIK+YIK LTPKL GE Q+AFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQDAFKKNIESATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDFQFFVGESMSDDS++VFA+YK+G+  PTFLY+APGLKE+KC
Sbjct: 121 LLPKLKDFQFFVGESMSDDSALVFAFYKDGSADPTFLYLAPGLKEIKC 168

[Close]

BLAST of Sed0023576 vs. ExPASy TrEMBL
Match: A0A0V0HHH4 (Putative P23 tumor protein-like OS=Solanum chacoense OX=4108 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.3e-76
Identity = 139/168 (82.74%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKELENGM+WEV+GKWVV+G+VDVNIGANPSAEGGGEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+ +IK+YIK LTPKL GE Q+AFKKNIE ATKF
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTFIKRYIKNLTPKLEGEAQDAFKKNIESATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+P+LKDFQFFVGESMSDDS++VFAYYK G+  PTFLY+APGLKE+KC
Sbjct: 121 LLPKLKDFQFFVGESMSDDSALVFAYYKAGSADPTFLYLAPGLKEIKC 168

[Close]

BLAST of Sed0023576 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein )

HSP 1 Score: 281.6 bits (719), Expect = 4.2e-76
Identity = 137/168 (81.55%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY DLL+GDELLSDSF YKE+ENG++WEVEGKWV  G+VDVNIGANPSAE GGEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DD   KVVDIVDTFRLQEQPT DKK FIAYIKKYIKLLTPKL+ E Q  FKK IEGATKF
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LIPRLKDFQFFVGESMSDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+PRL DFQFFVGE M DDS++VFAYYKEG+T+PTFLY A GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]

BLAST of Sed0023576 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein )

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-69
Identity = 125/169 (73.96%), Postives = 148/169 (87.57%), Query Frame = 0


Query: 1   MLVYSDLLSGDELLSDSFQYKELENGMIWEVEGKWVVKGSVDVNIGANPSAEGGGEDEGV 60
           MLVY D+L+GDELLSDSF YKE+ENGM+WEVEGKWVVKG++D +IGANP  E GGEDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEE-GGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPTMDKKSFIAYIKKYIKLLTPKLAGEQQEAFKKNIEGATKF 120
           DDQAVKVVDI+DTFRLQEQP+ DKK F+ ++K+YIK L+PKL  E QE FKK+IE ATKF
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LIPRLKDFQFFVGESM-SDDSSVVFAYYKEGATHPTFLYIAPGLKEVKC 169
           L+ +LKDFQFFVGESM  ++ S+VFAYY+EGAT PTFLY+A GLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

The following BLAST results are available for this feature:

BLAST of Sed0023576 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937958.1	5.0e-79	88.10	translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973...	[more]
Q2PS27.1	1.5e-78	87.50	RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN...	[more]
XP_022956345.1	2.7e-77	86.31	translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526...	[more]
KAG6597527.1	6.1e-77	86.31	Translationally-controlled tumor protein-like protein, partial [Cucurbita argyro...	[more]
XP_038878221.1	3.0e-76	83.93	translationally-controlled tumor protein homolog [Benincasa hispida]	[more]

BLAST of Sed0023576 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2PS27	1.9e-81	87.50	Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=...	[more]
Q9M5I8	2.6e-78	84.52	Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP...	[more]
P43349	4.9e-77	80.95	Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN...	[more]
Q944W6	1.4e-76	82.74	Translationally-controlled tumor protein homolog OS=Brassica oleracea OX=3712 GN...	[more]
P31265	6.0e-75	81.55	Translationally-controlled tumor protein 1 OS=Arabidopsis thaliana OX=3702 GN=TC...	[more]

BLAST of Sed0023576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICB3	2.4e-79	88.10	translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FHH5	2.4e-79	88.10	translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1GXJ9	1.3e-77	86.31	translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 G...	[more]
Q3HVK2	3.3e-76	82.74	p23 tumor protein-like protein OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
A0A0V0HHH4	7.3e-76	82.74	Putative P23 tumor protein-like OS=Solanum chacoense OX=4108 PE=3 SV=1	[more]

BLAST of Sed0023576 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16640.1	4.2e-76	81.55	translationally controlled tumor protein	[more]
AT3G05540.1	2.9e-69	73.96	Methionine sulfoxide reductase (MSS4-like) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018105	Translationally controlled tumour protein	PRINTS	PR01653	TCTPROTEIN	coord: 1..21 score: 61.22 coord: 46..57 score: 69.35 coord: 60..79 score: 60.36
IPR018105	Translationally controlled tumour protein	PFAM	PF00838	TCTP	coord: 1..164 e-value: 1.1E-56 score: 191.7
IPR018105	Translationally controlled tumour protein	PANTHER	PTHR11991	TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED	coord: 1..168
IPR011323	Mss4/translationally controlled tumour-associated TCTP	GENE3D	2.170.150.10	Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A	coord: 1..168 e-value: 3.0E-56 score: 192.3
None	No IPR available	PANTHER	PTHR11991:SF17	TRANSLATIONALLY CONTROLLED TUMOR PROTEIN 2	coord: 1..168
IPR018103	Translationally controlled tumour protein, conserved site	PROSITE	PS01002	TCTP_1	coord: 45..55
IPR018103	Translationally controlled tumour protein, conserved site	PROSITE	PS01003	TCTP_2	coord: 125..147
IPR034737	Translationally controlled tumour protein (TCTP) domain	PROSITE	PS51797	TCTP_3	coord: 1..168 score: 56.026188
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023576.1	Sed0023576.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0001558	regulation of cell growth
biological_process	GO:0048768	root hair cell tip growth
biological_process	GO:0090333	regulation of stomatal closure
biological_process	GO:0040014	regulation of multicellular organism growth
biological_process	GO:0051301	cell division
biological_process	GO:0007346	regulation of mitotic cell cycle
biological_process	GO:0031117	positive regulation of microtubule depolymerization
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0048527	lateral root development
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009819	drought recovery
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0019904	protein domain specific binding