Sed0023571 (gene) Chayote v1

Overview


Name	Sed0023571
Type	gene
Organism	Sechium edule (Chayote v1)
Description	HMA domain-containing protein
Location	LG08: 28333171 .. 28336336 (-)
RNA-Seq Expression	Sed0023571
Synteny	Sed0023571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAACTAAAAAATGAATCCAAAAAAGGAAGAAGTTATTATGGAGCAGGTGGAGTAGTGGATAAGCAGATTAGAAATCCACACATTCAACAAAAATGGCTTCCATCTCCATCTTCCCCACGCTTCACTCCATTTCACGCCCTCCAACTGCGCCTGCAAATCCAACCCTAATTCCCATTTTCAGACCTTCAATCTCCCTTCACACCTCCGCCGTCTCCGCCGCCTCCATCACCCAACGCGGCCTCAAAAAGCTCCGGGCAGTCGAAGACGAGCAAGCGCCGTTCGAGTCGCCGCCGGTCACCGTCCCCGTCTTGCCCTCTGACATTCTCACCATGTTCTTTCAGGTATATATACCCATTTTGCTGATAACGTTACCTCAAAAATGGGTTTCCAGTTTAGGTCAACAATGTGGTCGCATTTTGTGATTTCCTGGAACCAAAATTGCTTATGTTTTGCTCCTTTACCTGCTTACTTCTTATTAGCGAAAACTTCAATTTCTTGCCCTGTTTCTAGGTATTGACTTTAATTATAAATTTAAACCCTGAACATGAATATGTGTTTCTCTTGAATGGTGAATTTGAAAATTGCTCACGAACCAACCAATAAATTGTTATGAAAATGGAAACCAACAATCGTAAAACGAAGAATAAAGAAAATGGATAATGATAAACGTGAGAGAAGAAAAAGAACAACAAAGAAGTTTACGTGGGTCACTAACGTAGTGTTAGCTAGTCCACGGGCTGAGGAGGAGAGCAATTGTATTGAGAGAGACAAAAATTTACAGATGCAAAGATTTTGTCATTATACGGCTAGGGTTTAATTTGAATTTATATAGGCACTCTCCTTAAACCCTATTACATAATGCGTAAGCATTAAACAGAATGTGGTGCTAAAGACAGGATGCTCTGCGAGTGTGGTTAGCGGAATGCGGAATGCGCTTACTCATATAGATGCGTTCGCGCAACAGAATGCTAAACGCGCAAATGAGCTTTACGCAACGGGGTGTTGCCCCTGCACCCCCACTCGCTGACTGGGTAGCAAGACCCCCAATTGCTAATCGCAGGGCATTAATGCGTTCAAGTCATAACACAACATAAATCATACAGAATTTAACTGATAAAATACTCAATTCCCTTAACAAGAATAACCAATTTGTTAAGGGAATGGCAAAAACAATCAAAGAGAAAACTATAAAAGAATGTGAGAGAAAACACATAGAATGTAGGTGGTTCAAGTTAGCCACATCCACGGCAGAGGAGAGAAAAAAGAGAGTGCAAAAACATAATGTCAATCTAGGTTAGGATTTTAAGAGAGTTTATATAGTGCACCTTCATAAAACCCTATTACTGAATAGGTCTAGTTACATAAAAGCCCAAATACAGAAACAAAAACCTGATTACATATTTCGTTTAGGCATATCATCAACACAATTCTTGAAAAATAGTCTCATCCAATTTAAGAATGGCTATAGATTGTTGCAAATCTTTTTTAAGAAGTGGAAACTTAAATAATCGTGTGTATGAAAGGTACTACTTATTCAAGTATAGGGTTCTAATTAATGAAATCGAAAGTTGGTAAGATTTACTGTCTCGTCTTGAACTGTTCTCTAATTCTTTAAATTTTCAGTGGTTTATGAACTGTGCCCACTCTAGGATTTGCAGCATTATATCTTTGAATTGCTTGAGGCTTCTCTAATGTTGTACCTTCTTCGTTTCTGAAGGCAGAGGGGACACTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGGTACATTGTTCTTAATCCTTACTTATTCTTTCTATGTCTTGTTTCTTGTTATTTGTCAGACAAATGTCTTCAAGAAGTACTTTTTTAAAATAATTGATGAGCTGCTTTCTGTTGGTAAGATTCCACTTTTACAAGACCTGATTTTTCAATCTTGACCCGAGTGGAAAATCCTACTGAAGATTTTGAATAGGAACGCATTGATGATCTCAATTTTTCCTATTTTCTTAAAGTAAAGTATGGGATCTACTTTTGAGAGTAGTTCTTTTAGTTGAAGGACAGTTCCTGTAAGTACTAATTGAGTGTTTCCTCCCAAGATTTTAGAATTTTTTAAATTGCTTTCTAAAAGCACTTTCCACTGTTCTACAAGCAATACCAAACTCACTCTTAATCTTAATGAATTACTTTTGGCCTTTGGTAGCCTGATCACAACCCTTGAAGCTAGTCTGGTGGTTGTGGTCAAACGTTTTAAGTACAAATTAGATACTTTGTCTTTTATCTCTGCCAATTCAATCAGTACTAGTATGTCCAAGAATCAGAAGGTCATGAGTTTGTATCTCTCACTTTAATTGTTGTTGAACTGAAAAAAAAAGAGGCAATCAGTACATCGAGTTAGATATTGCTAGGCTGTGTGTACATCTGTGTGTGTTCACTTCTTCGGTGAGATATTAAAAGCACTGAAATGTAAGTAGTGTTGCTGAAATGAAAGGAAGTGCTAAATTAACAACTAAATTGCTAGTTCTTTTGAAATGATGTATGAGCTTCTTTTTTCTTTTCTTCCCCACTGTCTCGAGATTTGAGTTTAATTGTTGTTTGAAGTAAAAATTGAAGTCTAAAATTGCATATTCTTATATGTTCTTCTGTAGCAAACTGAGGGCATCACCGGGTTGAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGGTTTGTATGATCATTAGTTGTCAGAAACCGACTTCTGTGCGCTGTACAAAATCACCTAAACATTTTTCTTCTTCTTCTTCTCTTGTTCTAGCTTACGAAACAAACAACAATACAATCGACAGGAGTGGCCTCGAGCTTGATCGAAACCATTCAGGGTGCAGGTTTCAAGTTACAAACATTAAACCTGAGTTTCGAGGACAAGGAAGAGGTTTTTGTTTAGATTCTCTTGATTTTGAATTGTTAGAATTGAAGGAGAGGGAAAGAGCTTCATTGATTATGTCATAGAAGGTATGACTGTGGTGATGGTGAGATCCAACTCAAATGGCCACAGAAGTGTGCTTAAATGTATTATTTTGTTGCCATAGTTTGATTTTTTGTGCATGAAATATGGAGTTGAAGCTTCATACGATATAAAAATGGAAAGCATTGCTTTGAAATGTGCTTTAAATAATGAAAAACTACTTGAACA

mRNA sequence

GTTAAACTAAAAAATGAATCCAAAAAAGGAAGAAGTTATTATGGAGCAGGTGGAGTAGTGGATAAGCAGATTAGAAATCCACACATTCAACAAAAATGGCTTCCATCTCCATCTTCCCCACGCTTCACTCCATTTCACGCCCTCCAACTGCGCCTGCAAATCCAACCCTAATTCCCATTTTCAGACCTTCAATCTCCCTTCACACCTCCGCCGTCTCCGCCGCCTCCATCACCCAACGCGGCCTCAAAAAGCTCCGGGCAGTCGAAGACGAGCAAGCGCCGTTCGAGTCGCCGCCGGTCACCGTCCCCGTCTTGCCCTCTGACATTCTCACCATGTTCTTTCAGGCAGAGGGGACACTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACTGAGGGCATCACCGGGTTGAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTTACGAAACAAACAACAATACAATCGACAGGAGTGGCCTCGAGCTTGATCGAAACCATTCAGGGTGCAGGTTTCAAGTTACAAACATTAAACCTGAGTTTCGAGGACAAGGAAGAGGTTTTTGTTTAGATTCTCTTGATTTTGAATTGTTAGAATTGAAGGAGAGGGAAAGAGCTTCATTGATTATGTCATAGAAGGTATGACTGTGGTGATGGTGAGATCCAACTCAAATGGCCACAGAAGTGTGCTTAAATGTATTATTTTGTTGCCATAGTTTGATTTTTTGTGCATGAAATATGGAGTTGAAGCTTCATACGATATAAAAATGGAAAGCATTGCTTTGAAATGTGCTTTAAATAATGAAAAACTACTTGAACA

Coding sequence (CDS)

ATGGCTTCCATCTCCATCTTCCCCACGCTTCACTCCATTTCACGCCCTCCAACTGCGCCTGCAAATCCAACCCTAATTCCCATTTTCAGACCTTCAATCTCCCTTCACACCTCCGCCGTCTCCGCCGCCTCCATCACCCAACGCGGCCTCAAAAAGCTCCGGGCAGTCGAAGACGAGCAAGCGCCGTTCGAGTCGCCGCCGGTCACCGTCCCCGTCTTGCCCTCTGACATTCTCACCATGTTCTTTCAGGCAGAGGGGACACTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACTGAGGGCATCACCGGGTTGAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTTACGAAACAAACAACAATACAATCGACAGGAGTGGCCTCGAGCTTGATCGAAACCATTCAGGGTGCAGGTTTCAAGTTACAAACATTAAACCTGAGTTTCGAGGACAAGGAAGAGGTTTTTGTTTAG

Protein sequence

MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASITQRGLKKLRAVEDEQAPFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

Homology

[Close]

BLAST of Sed0023571 vs. NCBI nr
Match: KAG7015253.1 (hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.5 bits (545), Expect = 6.6e-52
Identity = 135/182 (74.18%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQR 60
           MASIS FP  HSISRP T  ANPT  PIFR SISLHTS   AVSAAS            R
Sbjct: 1   MASISTFPIFHSISRPAT--ANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSR 60

Query: 61  GLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVTEALE 120
           GLKK RAVE E +         E+P VTV V PSD+LTMFFQAEGTLNESAIPSVTEALE
Sbjct: 61  GLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALE 120

Query: 121 QTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEV 164
           QTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEV
Sbjct: 121 QTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 180

[Close]

BLAST of Sed0023571 vs. NCBI nr
Match: XP_022928515.1 (uncharacterized protein LOC111435303 [Cucurbita moschata])

HSP 1 Score: 214.2 bits (544), Expect = 8.6e-52
Identity = 134/182 (73.63%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQR 60
           MASIS FP  HS+SRP T  ANPT  PIFR SISLHTS   AVSAAS            R
Sbjct: 1   MASISTFPIFHSVSRPAT--ANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSR 60

Query: 61  GLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVTEALE 120
           GLKK RAVE E +         E+P VTV V PSD+LTMFFQAEGTLNESAIPSVTEALE
Sbjct: 61  GLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALE 120

Query: 121 QTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEV 164
           QTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEV
Sbjct: 121 QTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 180

[Close]

BLAST of Sed0023571 vs. NCBI nr
Match: KAG6588977.1 (hypothetical protein SDJN03_17542, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-51
Identity = 134/182 (73.63%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQR 60
           MASIS FP  HSISRP T  ANPT  PIFR SISLH+S   AVSAAS            R
Sbjct: 1   MASISTFPIFHSISRPAT--ANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSR 60

Query: 61  GLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVTEALE 120
           GLKK RAVE E +         E+P VTV V PSD+LTMFFQAEGTLNESAIPSVTEALE
Sbjct: 61  GLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALE 120

Query: 121 QTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEV 164
           QTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEV
Sbjct: 121 QTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 180

[Close]

BLAST of Sed0023571 vs. NCBI nr
Match: XP_023529800.1 (uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-50
Identity = 132/182 (72.53%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASITQ---------R 60
           MASIS FP  HSISRP T  ANPT  P+FR SISLHTS   A SAAS            R
Sbjct: 1   MASISTFPIFHSISRPAT--ANPTPFPVFRSSISLHTSTNFAASAASFRHSAVYGHRQPR 60

Query: 61  GLKKLRAVE------DEQAPFESPP-VTVPVLPSDILTMFFQAEGTLNESAIPSVTEALE 120
           GLK  RAVE      +++   E PP VTV V PSD+LTMFFQAEGTLNESAIPSVTEALE
Sbjct: 61  GLKNRRAVEGEASVPEQEVEGEEPPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALE 120

Query: 121 QTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEV 164
           QTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEV
Sbjct: 121 QTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 180

[Close]

BLAST of Sed0023571 vs. NCBI nr
Match: KAG6581006.1 (hypothetical protein SDJN03_21008, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017747.1 hypothetical protein SDJN02_19613 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-50
Identity = 130/189 (68.78%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------R 60
           MASIS+FP LHS+SRP  A ANP+  PI RPS +L +S+   VSAAS            R
Sbjct: 1   MASISLFPALHSVSRP--AIANPS--PISRPSFALPSSSSFTVSAASFRHSAVKGRSRLR 60

Query: 61  GLKKLRAVEDE--------------QAPFESPPVTVPVLPSDILTMFFQAEGTLNESAIP 120
           GLK++R VE++               +P E P VTVPV  SDILTMFFQAEGTLNESA+P
Sbjct: 61  GLKQVRVVEEDASIPEQGVEGEALSPSPSEQPAVTVPVSSSDILTMFFQAEGTLNESAVP 120

Query: 121 SVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLS 164
           SVTEALEQT+GITGLKVQ+VEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLS
Sbjct: 121 SVTEALEQTDGITGLKVQLVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLS 180

[Close]

BLAST of Sed0023571 vs. ExPASy TrEMBL
Match: A0A6J1ERV9 (uncharacterized protein LOC111435303 OS=Cucurbita moschata OX=3662 GN=LOC111435303 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.2e-52
Identity = 134/182 (73.63%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQR 60
           MASIS FP  HS+SRP T  ANPT  PIFR SISLHTS   AVSAAS            R
Sbjct: 1   MASISTFPIFHSVSRPAT--ANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSR 60

Query: 61  GLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVTEALE 120
           GLKK RAVE E +         E+P VTV V PSD+LTMFFQAEGTLNESAIPSVTEALE
Sbjct: 61  GLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALE 120

Query: 121 QTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEV 164
           QTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEV
Sbjct: 121 QTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 180

[Close]

BLAST of Sed0023571 vs. ExPASy TrEMBL
Match: A0A6J1J0J2 (uncharacterized protein LOC111482359 OS=Cucurbita maxima OX=3661 GN=LOC111482359 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50
Identity = 129/189 (68.25%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------R 60
           MASIS+FP LHS+SRP  A ANP+  PIFRPS +L +S+   VSAA+            R
Sbjct: 1   MASISLFPALHSVSRP--AIANPS--PIFRPSFALPSSSSFIVSAAAFRHSAGKGRSRPR 60

Query: 61  GLKKLRAVEDE--------------QAPFESPPVTVPVLPSDILTMFFQAEGTLNESAIP 120
           GLK++R VE++               +P E P VTVPV  SDILTMFFQAEGTLNESA+P
Sbjct: 61  GLKQVRVVEEDASIPEQGGEGEAPSPSPSEQPAVTVPVSSSDILTMFFQAEGTLNESAVP 120

Query: 121 SVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLS 164
           SVTEALEQT+GITGLKVQ+VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLS
Sbjct: 121 SVTEALEQTDGITGLKVQLVEGIASVELTKQTTIQSTGVASSLIEIIQGAGFKLQTLNLS 180

[Close]

BLAST of Sed0023571 vs. ExPASy TrEMBL
Match: A0A6J1F3X5 (uncharacterized protein LOC111441946 OS=Cucurbita moschata OX=3662 GN=LOC111441946 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50
Identity = 130/189 (68.78%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------R 60
           MASIS+FP LHS+SRP  A ANP+  PI RPS +L +S+   VSAAS            R
Sbjct: 1   MASISLFPALHSVSRP--AIANPS--PISRPSFALPSSSSFTVSAASFGHSAVKGRSRLR 60

Query: 61  GLKKLRAVEDE--------------QAPFESPPVTVPVLPSDILTMFFQAEGTLNESAIP 120
           GLK++R VE++               +P E P VTVPV  SDILTMFFQAEGTLNESA+P
Sbjct: 61  GLKQVRVVEEDASIPEQGVEGEALSPSPSEQPAVTVPVSSSDILTMFFQAEGTLNESAVP 120

Query: 121 SVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLS 164
           SVTEALEQT+GITGLKVQ+VEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLS
Sbjct: 121 SVTEALEQTDGITGLKVQLVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLS 180

[Close]

BLAST of Sed0023571 vs. ExPASy TrEMBL
Match: A0A6J1JF03 (uncharacterized protein LOC111486304 OS=Cucurbita maxima OX=3661 GN=LOC111486304 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.7e-50
Identity = 128/182 (70.33%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASIT------------QR 60
           MASIS FP  HSISRP T  ANPT  P+FR SISLHTS   AA+               R
Sbjct: 1   MASISTFPIFHSISRPAT--ANPTPFPVFRSSISLHTSTNFAAAAAAFRHSAVYGHRQPR 60

Query: 61  GLKKLRAVE------DEQAPFESPP-VTVPVLPSDILTMFFQAEGTLNESAIPSVTEALE 120
           GL+K  AVE      +++   E PP VTV V PSD+LTMFFQAEGTLNESAIPSVTEALE
Sbjct: 61  GLRKRMAVEGEASVPEQEVEGEEPPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALE 120

Query: 121 QTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEV 164
           QTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEV
Sbjct: 121 QTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEV 180

[Close]

BLAST of Sed0023571 vs. ExPASy TrEMBL
Match: A0A6J1D9Q3 (uncharacterized protein LOC111018338 OS=Momordica charantia OX=3673 GN=LOC111018338 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.8e-48
Identity = 127/185 (68.65%), Postives = 137/185 (74.05%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASIT-----------QRG 60
           MASIS F  LHSISRP   PANP LI    PSISL TS +S A+ +           +R 
Sbjct: 1   MASISTFSALHSISRP--RPANPALIS--TPSISLPTSNLSFAAASFRNSPVQGERRRRR 60

Query: 61  LKKLRAVEDEQA------------PFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVT 120
           LK+  AVE++ A            P E P VTVPV PSDILTMFFQAEGTLNE+AIPSVT
Sbjct: 61  LKRATAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMFFQAEGTLNETAIPSVT 120

Query: 121 EALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED 163
           EALEQTEGIT LKV+VVEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+D
Sbjct: 121 EALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKD 180

[Close]

BLAST of Sed0023571 vs. TAIR 10
Match: AT5G14910.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 92/180 (51.11%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 1   MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVS-------AASITQR--GLK 60
           MASI+   T HS  R  +   + T +     +++  T A+        A  I Q   GL+
Sbjct: 1   MASIAASSTFHSFCRTKSPNLSSTHLLPLSKNLNFRTRAIGNSRNCSFAGFIKQNRLGLR 60

Query: 61  KLRAVED--------EQAPFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVTEALEQT 120
           KL ++ +        E+ P E+  V+VPV PSD+LTMFFQA+GTLNE+AIP+VT AL+  
Sbjct: 61  KLSSIGEGGEGVAVAEEQPQET--VSVPVSPSDMLTMFFQADGTLNEAAIPNVTRALQDI 120

Query: 121 EGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV 164
           +G++ LKVQV EG+A VEL KQTT+Q+TGVAS+L+ETIQGAGFKLQTLNLSFED +EV V
Sbjct: 121 DGVSNLKVQVSEGVAVVELLKQTTVQATGVASNLVETIQGAGFKLQTLNLSFEDDDEVLV 178

The following BLAST results are available for this feature:

BLAST of Sed0023571 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015253.1	6.6e-52	74.18	hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022928515.1	8.6e-52	73.63	uncharacterized protein LOC111435303 [Cucurbita moschata]	[more]
KAG6588977.1	1.9e-51	73.63	hypothetical protein SDJN03_17542, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023529800.1	1.2e-50	72.53	uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo]	[more]
KAG6581006.1	2.1e-50	68.78	hypothetical protein SDJN03_21008, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0023571 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERV9	4.2e-52	73.63	uncharacterized protein LOC111435303 OS=Cucurbita moschata OX=3662 GN=LOC1114353...	[more]
A0A6J1J0J2	1.3e-50	68.25	uncharacterized protein LOC111482359 OS=Cucurbita maxima OX=3661 GN=LOC111482359...	[more]
A0A6J1F3X5	1.3e-50	68.78	uncharacterized protein LOC111441946 OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1JF03	8.7e-50	70.33	uncharacterized protein LOC111486304 OS=Cucurbita maxima OX=3661 GN=LOC111486304...	[more]
A0A6J1D9Q3	4.8e-48	68.65	uncharacterized protein LOC111018338 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Sed0023571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14910.1	1.2e-35	51.11	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 81..152 e-value: 4.6E-5 score: 25.8
None	No IPR available	PANTHER	PTHR35756	OS05G0337400 PROTEIN	coord: 1..161
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 79..150 score: 9.075594

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023571.1	Sed0023571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding