Sed0023539 (gene) Chayote v1

Overview


Name	Sed0023539
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane and coiled-coil domain-containing protein 4
Location	LG07: 14861974 .. 14876397 (+)
RNA-Seq Expression	Sed0023539
Synteny	Sed0023539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATACCTCATCCTTGTTGCCGCCCACTCATCGCTATGCCGCTGGAGGATTGTTTGCGATTGCCCTTCATCAGGCTCAGATCCATCAGACGCGTCCGCTAGGGCTTTTCCCCGTCGACGATCCTCACTCCGAGGAGCGAACCAGTAGTTGTAGCGCCAGCAGCAGCGATTCCGTCTCTGACGACCCCGAGCTTTGGGTTCATCAATCCTCCGGCCTGCTTCGTCCCGTTTTCAGGTTTGTTCTTACCTTTTCTTCATTTCGCCCTGACATTTACTCATCATGTTTAGACTTGACTTTCGCCTTGTTTGCTTTTATTTTTGCCTTCTGACGTTATGTTTAGGTTTGTTTACTGATCAATCATTTGTGGTTCTGGAATGTGTTATTGGTATATTTGATTGCTGAGAACAAGTAGAGCTTTATTTTTTAAACATTTAATTAGCTCCAGCCTCTAACAGTTTTTATCAATGTTATTTTTCATCTTTGATTCATTACTAACCCGTGTGTTTTGTTTGATAAAATTAAATTCAAGACCTACACAAGAGGAGCGTTGAGCATCAGAAAAGATTATTTTTTCCCTTATTGAAAAGTTACAATCGATCATGAAACTCGTGGCCACAAGAGGACATGTGAAATTAGAAATTGATTCAAAGGGAATATGAGCGTTCTTGTATGGACTTTCGTGTCTCACGGGAATTGACTTTGAAAGAGACAATAAAGATTAATCAAAATGAATTGTATGAAATGGAAATAATATTTCTGATTTAGTGATTATAGAAAATTATGTAGTTCCGAAGTTTGAAAAAGCAGTATTTTTATTAAGTGAAATTTAGAAAATAGCTCTTGGAATCTTGGAATGAGCTTTCATCTTGAAATTAGTATAGATTTTTCCTTTTAGTTTTCAACTTTCATTTGGAAGCACGGAAGTATGAAAGAAAAGAACCATAACAGGCCTAGAACTCAAAGATAACAGTAAAAGGGAAAGGAACTTGGTATTACAAAAATTAACATGTCTGAACCTTTCATAATATAACTATGTTTTTATTTTACAAAGAGTAAAGCTTAGGAACCTCGCATATTCTATTTTAAAATTTTCCTAGTTACTTATTTGACAAGGTTTTTACTTATTTGACAAGGCTGATCTTCGTGGGAATGTCTCAATGTTGATTTTTGTGCAATTAGGTTTTTACAGATTGACTCTCCAGCTTGGTCTGGACTTGAGGAAACTGCAGGATTCGGGACAGCTAAGCATCACATTGGAGCAGTATGTTATCCTATTTCTCTTGAAGCCCATAAACTAAGATACCATTCATTTCTTTCATCTTGCATATTTTTACTGTTTTGCAGTGATATAGCTTATTAGATTTATCTATTTCATATTACTCTATGTGATATACTATAGATATTATGTGCCTTATCACATATAATATATTGATATTGTACCTTAATTGTGACAAGGTCTGTCCCTTCATTTTACTCCATTGTGTAATTGTATCTGTGACATGTCTATGTGTATCTGTTGTCTCAGTTCTTACGGTTGCTATCAGAGGACTGTGAAAAATCTTCCGAGATGATAGATCAAGAAGTTGCTATATCAAAAGCTGTCGATGGTATAGCAGATAACATGGAGAATGATATAAGAACTTCTCAGTCTAAGGAAAATTATCGTGAATATGAATATGAATGTCGAGAGAAGTGCTTGTCTGCCGAGGCGAAATCAAATTTGGAAGAAGCTGACAGGCAAGCAGACAATACAGATGGTAATGCAGAGGTTATTAAACAGCTGGGTTTTGGGGCATGGACTGAGACTATTGAGCAACCTATTGATGAGGAAAAAATGCTTAGTTATCAGAGAAAAGTGGTTGTTCTCTATGAGCTTCTATCTGCTTGTTTGGCTGACACAAGTGAAAACGACAAGAAACAATCCCCTCGACAAAGAAAAGGTTATGATGCCCGTCATCGTGTGGCTTTAAGGTTATTATCAACGTGGATTGATATCAAGTGGATAAAAATGGTATGCTTGCACAACTTTTGTAATTTAGGCCCCGTTTGATAACTACTTTGTTTTTCATTTTTTGTTTATGAAATTTAAGCCTACAACAACTACCTTACTATACCTTTTTCCTTATTTGGATATCTACATCTTACCTATATTTTAATAAACAAAACCAAAATTTGAAAACAAAAAAATAGTAGTTTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCTACTTTCTTAAGGAAATATGGATACATGGTAGGACAAATTGAGCAAATGGTAAGAAATCTGAGTAGAAATAAGCTTAAATTTCATAAACCAAATGGTTATCAAACGGGGCCTTATTTATTTGTTATTCTTATTATTGCGGAGATCCCATCTCTTTGTAAATTACTCATCTCCCTTTGTGCTGCAGAGGAAAAAAAAACTCTCACGTTTCTAATAAAACCCCAGCAGTTCCTCACCAGCCATAACTCCCATTAGCCATGTCATAGTCATAATTATACTTGTCTGTAGAACCTTCGTCATCCCTATAAATGCATAGCCACATAGATGTCGTGTTCACATATATATATATAATTAAACTTAAATTCATAAGTTGGGGTAAATTTAATTATTTCAACCAACAAAATATATATATAGAGAGTGCTGAGAATTAAAAAAATCAAGGCTGCTAATTCAGTTCTTGCTTAACTGAATTATTTATATAGAGCTGAGAACTCGAAAATCAAGGCAGCTAAATTCTTGCCTCAACTAAGGCTAGCAGTTCTTGCTAAAAAGACAACGAAAAAAAGATGATTTACCCACTCTTCATGTATACATCAATGTTACCTGGTGTAGGATATCATTTTTTAATCTTCAGCTGTACTTGGCCCTTCATGCACGAAGTCCATAAGAATTTTGTAGTATTTTTCATCTCCAAATAACTAAGGCCAAGTTTTTCTCCAAGAAACTTTTTTCCACTTGTCATATTGAAGAAACAAGGCTAGAATATTATGGAGGAGTAGTACCAAAATTCTTCTTATTAACCTTTATTGACTTCTTTCTCTAGTACTTTCTTTCTTTTTTCAGAGTGGGTCTAAGGACTGATATTTATTTATTTATTATTATTGCTACAAAAATATAGGTGCTCGAACCGTAAATGACAATTATTAGATAGTGTTGTGTGGTAGGATTCGATTGACCACAAATCATAAATTATATTTTTAATTCTTAATGACGAGTGAACCCAGTTTATAACTTAGCATAGCTGATATCACAGTTGATTTATATATTGCATTCAGCTTTTTCTCTGCATCCCTTGCATGACGTGAGCGATTTCCATCAACTTCAGAATTATTATTGTTATTATTATTATTTTTTGAGATTACATCAATTGGAGATGGGGGATTTGAACTTATGACCTCTTAGTCATTGGGTGTACACTATTGCCATTGACAACTTTAGAATTATTATTATTATTTCAATATTTGATGATTTATTTTTCTTTTTTCATTCGGCTCCTTATGGGTGCATTTTCTGCTTTGCAGGAAGCGATTGAAACAATGATTGCTTGCTCGGCTATGGCTCTAGCTAAAAGTGTGTCTGAGATGGGAGAAGATAACCCTTCAAAGGAGAGTAAGTGGAATAAGTGGAAACGTGGTGGTATTATTGGTGCAGCTGCATTAACGGGAGGGACCTTGTTGGCAATTACAGGAGGTACTTGGTCCCTTGATTTGAGTACTCTATCGTAGGGGTGTACAAAAAAAAACCAACAACCTGATCAATCCTAACTACTCAACCCAAATCGTAAGGGTTGGGTTGGGTTGGGTTGGGTTATAGTTTTTTTGGGTTGTGTTGAGTTGTGTTATGATTTTGTAATTTTTGTTGGGTTGTGTCGGTTTTTGGGTTGACCAATTCTTGGCTGATGGCTCGTTCAACCAACTTGAATTAAGAATAATATTATATGTGTCTGTAAGATTAATCAATAAGATAAGTTATTAGTATATTAGTAACGAACATGCACGAGTAATATAGCCTAGGTTTACGTATAGTATCATGCAATTTTTTTTTACATATTTATGGGCTATTAGTTAAGTTTGGAAGAGGAAAAAGAAATTAATATAACCCGAAAACCTAGGCCAAGTCAACCCAAAAAACATGGATTGGGTTTCCCTAGGCCCTAATACATAGGGTTGGACGGATTGACGGATTGACCAACTCGAAAATCTCTACCGTGTCTATAGACTATAACCTACTCAAAATTCTAGGATAACATATTCTAGGTAAATAATTTCTATTATATAGTAATACATTTTATTTTTGTTTTCAGGATTAGCTGCTCCAGCAATTGCTGCAGGCTTTAGTGCTTTAGCTCCTACATTGGGTACCATCATCCCCGTCATTGGTGCAAGTGGATTTGCTGCAGCTGCCAGTGCTGCAGGAACTGTTGCTGGTTCCGTGGCTGTTGCTGCATCATTTGGTGGTAAAATAATACATAAAAAACTTGAAGTAATTACATCATATGGTGGAAGTGGGAGTTTAAATATACTTAAAAAAATTTCAGATCATTCAAGTTACCTTTTGACTGGGTTTTTCAGAATTGTGACTTTCTTTTTATGATAAGAAACAATTTGTTACGATTGAACCATCATAGGGTGGCTCAATTGGTCAAAGAGGGCCTTGGGGTGCATAAGGTGATGGATTCAATCCCCATGGTGGCCATCTACCTAGGAATTAATTTCCTACGGGTTTCCTTGGCATCCAAATGTTGTAGGGTCAGGCAGTATTCCCCGTGATAATAGTCGAGGTGCGTGCAAGCTGGCCCAGACAGTCACGGATATCAAAAAAAAAAAAGAAACAATTTGTTACAATTGGCCTTTAGAGGAATAATAGAGGAGTATATAGGCAAATAGTTAGGGAGTTGGTTAGAAGATTATGGTTATAAATACTAGGAGATTGATAATGATAGGGTATGAAAATATTGGGTAATTTCTTTGGGCTTAAGAGAGGATCCTCTAAAGAGAGAGGTTCTAGGTGCCTGCCTTAACGTAAGTTATCTTGGATTTCCTTTATGTTTTGCTATCAATAGAAGTTATGTTCTATCAATTTGGTATGGGTTTTGTTCTGACCATGGATTGTGAAGAGTTCCAACGATCGATGACATTGTTGGATCTGTTTCAAGCTACGATGAAGGAGAGTTTCAGGGAAGAAGAGAAATTATTACATAAAGTTGTAGAGAATTCACAGAGTGTTGCAAACAAATAGTAGAGAGATGCAAGAAAATAAGATAGGAAAGTGAAGAAATAGTGTTGGTTGATATAATTAAATTTACCCAACCCATCAGTTTAAGCTTTTGAGTTGATTGATGGTTTAACATAATTTAACACACCCTGCTCGTAGAGCTTCAATTTTGTCTGACATAATTCAATGCTTTCGAGGCGCCCTCCATGTGCATGATAGAGACCGATGAACAATCTCCACGATCGAACAACCCGAGTCGTGAGATTTTGTCCTCTAGGGTCTTGACCCTCATCATCAGTTCTTGGATGGGCATCTCATCAAGGTTGCCAACAATCACGTCAATCATATCGACTTTTTCACCGATCTCATCCAGGTGAGATTCTATAAATCGAATATTGTTAGGGAATTCTCTTAGATAGAGCATCAGCTATTCCATCTCAACCAACCGGTGAACGTGGGCCTTACCCAATGTTTTCTTCTCGGACATGCTTGCTTAGACTTTTGAACGGAGCTAACAAAGCTCTGATACCAATTGTCATGATCTAATTTTGTTGTCCTTGCGAAGCGATCGTGAGGCACCTGCTCTAACCTGACGAGTAAGTCAGCCAAACAAAAACGCAAAGTGGGTGGCACAACTGGGAGCAACCTCCTTGACAGTCTTATGGAGAAGGTTTTCGAAAGAGGGATAAAGAAGGTTTTGAAATATTTTGTCTTTGAAAGGTTATACAACACAACAATAAGAACCATATAAACTATATTGTATTATTATATAAATGGTAGGAAGGAAGTTTCAAGAAGTCATAACTCCTATTATACATTTTGGGTCATTTTTGATGTGGCAGGCTTGTACATCAAAATGGCAAGGAGACATGTTTGAAAAAATACAAGGAAATGACAACAACATGGAAAATAAATCATTTACAATAAAGCATGATAAAAAGGGGTCTAAAGGGATCTACGGTCATGTGCAACACGCACTTGACATGCATGACCGTGAAATATTAAATTTCCTTCAAAATAATCCAACAATGTGTGATTGAGTTTCTTAGAGCAAGGGAGAGAGTAAAACTGAGATCATTTGAGAGAGGAGTGTGCCAAGTGCATAAGGAGTCCTAAAGAGTTCTGGCACAGCTACAGTTAATCAATGTGTGATCGAGTTTCTTAAGACTTTTTGTGATTGAAGCTGTTTGGCGGAGATTCACTCCCCAATCTCCCATGCAAGACTTCAACCTTTCTCAATATAATTTAAATCCTCTCACAAGCCTACAACTTCTATTTATATAGTCAATCTTCTAAGAACACTTGACCAACTAGTTAATCATAACCAATGTAAGAGGGGTCTATCATTATCTGGCCCCAAAAGCGCACCTTATGTTCAAGGTGTTGTTACAAAAAAGACTTCAAAAACGGATAACAAAAGAAGAAAAAATTTGCCTCTTTTTTGTGGCGGAAGCATCCGAAAACAGTGGGCAGTGGTTAGGGATGATGGAAGGTGCTGACAGACGGATAAATTTCTTCTTCTCCACGCCACCGTCTTCTTCCTCCTTTATTTTCTATTTTTTTAACCTTGTATACGCATGTTCTTCTTTCCTATCAGATTTTGCCTCCACCAAGAATGAATTCGCTAAGTGATCCCATCCTGATTGTTGGTTGTTTTACCACCATGCTTGTTACTTCTAGTGGTCAATAATTTTTTAGTAGTTTTTGCCTTCTTTAACAACATCAAAACTATTTTTTTATACATTTTTCTCCTTTTCTGTTTTTGAACAACTTTATTGTGTGAAATTAAAGAGAGGAAATATTTTTCTGTGTTAATATTGATATTTTTCTGTTTTTCTGTTTTTCCACCATGCTTGCTACTTCTAGTGGTCAATATTTTTATGTAAAACCACCAATCAATCCAAAAGCCTAAGTTAATGGATTGGGTAAATTTAATTATATCAACAAACAATAGTCTATCTATCTTATAAATGTTGTGAGGTATCCTCACCTTTCTAATATGGGATCCTTAACATGCACCTTCAAAATGTACCTCTTTGGGTTCACCATTTTTTTTTTATTGGAACTCCATTTCTTTTTAGGGGACCGAATATCCTTTGGGTTTAATGTGCTCTGATACCGTATTACATAACATGACGTTTCATCTCGAAACCAATTGGCAATGAATGGAGTTGCCCATCTATTTTATAAATGTTGTGAGGTGTCCTCACTTTTCCAATGTAGGATCGTCAACTACTCTTAGCATCTATTTTCTTTGGGAGGAGGCACATGTATGTCTCATTTAAACTTCATAAAAATAACTTGGAACGCCTTCAATGCAATATGGTAGTGATGCCAATTATCCTTCCGGGCTCTTTCTTGTTGTTCTGCACCCTAGTTCTATGGTTTTTTTTAAGTAGGCCATTGAACTATTTAAAGGATTTTTAAGAAACCTTAAGATTTTGAAAATAATCCGTGGAGAACTCTGCTAACACCTCTGTGTAAATATTGTCCAACTCAGCTGCTGGAGCAGGACTTACAGGAAGCAAAATGGCTAGGAGAATTGGGAGCATTGATGAGTTCGAATTTAAACCAATTGGAAAAAATCATAACCAAGGGGTTAGTGTCTTGCTTGTTACTTGCAACTTCATATCTCTTGTTTTTCGAGATGGTAATTGATAGTATTCTGCTTATTTCAGAGATTAGCAGTTGAGATTACAGTGTCAGGCTTTGCATTTGATGAGAAGGATTTCGTTAGGACGTGGGAAGGACTACATGACAACTTGGAAAGGTATACCAAGGTTTTTAATCCTACTCAGTTTGGTTAATTGGAATCTGTGAGAATGTAGTTTAAGCATGATTTTGTTTTTACTATCACGCAACTGCTATTTTTCCATTTCTTCTTTACCCCGATCTCATAGTGGTATTTGACTAGAAACATATTTTTATCGTTTTCTGGATATCTTAGACCATAGGTTTTTAAACTGTTATGTGTTTATGTTCCCCCTATGTATTGGCCCTATGATTGTCCTAGGCCTTCCCCTTCTTTCTTCCCTTGTTTTTGAGATGGATTGTAACTTTCATTTATGAATGAAGTTTTTTTGTTTCCTAAAATAAAAATTAAATTCTGGGATGAACAAGTTAATTTTATCTCCTCTTCGAATGTTTAGGTATGCACTGCAGTGGGAGTCTAAAAATATAATTGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGTAGTTTTTCTTTTAATCCCTATGCTGTTATGATCATTAGTCATTATGTTCACAAATTACTCCTGCCGTAATGGTGATATTCTTTTCTTGACAATAGCACTTGCATTGGAATTGATGAAGCGAGGTGCAATGTTGACTGTTCTGAGCTCCCTTTTAGTAGCACTGGCTTGGCCGGCTACCTTACTTTATGCTACTGATTTCATAGACAGCAAGTGGACAATTGCCGTCGACAGGTTGTAATTCCTTTGATTGAAGGGGCTACCTTCAGGTTCAAAAACTATTTTGAGCGCCAGATTATTTTAGATAAAATTGTAGCCATGCAAGTTGTTCACCAATCTGGTTTCTGAAATATAAACGCTTCATGTTTTTGCTTGAGTACATATTTTTTTTTTGCTATAACTTATAAACCAATCCTGGAATTTCTAGTTAAGACAGGAAGCATGTTGTGTGATCGAGCTAGTTACTTGCAAGAAAGAGAAGTTTTCTTTCATGTGTGGTTCTTCATGTGATTGTTTTCATTGCGTTCCATAATTGCCGGGACTCCATACAATTTATAGCAATAAGAGGTTTGAGTGCAGCATTGCAATAATTGGAAGAGTGAGATTGAACCATTTAATCAAATGCTATTATAAAGAAGAAAAAAAAGAGAACAAAAATTGCAGAGCTTGCTTCTAAGTTGTATATATTACATAATCATGCAACTCTAGCGTGATTCACAGTCATGAGATATAAGCCTTGCCCAGGATGATTAAAGTGATAAAAGAATATGCTAGTCTTCTTTCCTTAATGTCATAGCTGCTAGGCTATTAATCAAAATAAGATACATGTCAGAAATCAGAATATCCTGTTCCTTTCAATGAATTTCTCTGTCTTCGTGCTATGGCCTAGCCTATTAAGAGGTCTTATAGTTTTTATAATCCTAAAAAATCTTAACAGGCCTTGTGTCAGATACATAGATATTTTCTTTTTCCTTGGCTTAATATTCTAGAATAAGCCACTCATATTACAGGGATATCAGCTTATAGGATCTCACTGTTCTGACATTTTATTCTCACTCTAATATCTAAATTACGTTTTCACAATTTCTGAGTTGCATTTTCAAAGAAATGTTTTGCCTTTGATTTTCTGTATAGATCAGATAAAGCTGGTAGAATCCTTGCAGATGTGTTGTTGAAAGGTTTACAAGGGAACAGGTGCAACATTCTTACCTTAAAGTTAGAAGTCAGTTCTATTTTTCAAAAATTGATGATAGCTTCTCCCACAATATTTCCAGGCCTGTGACACTTGTAGGGTACTCACTTGGTGCACGTGTCATATTCAAGTGTCTCCAATATTTGGCTGAGACTGAAAAAAATGGTAATCATCATTTCTCAATAATCTGCCTTTTTATGAATTATCTTACCATACTTAAATATGCTCAGCTGAGCTTGTGGAAAGAGTTGTTCTTCTCGGAGCACCCATATCAATTAAAGATCAGAACTGGGAAGCTGCTAGAAAGGTGACCAGAGCACTTACCTCAACTTTTATTTCTTCTTGTTTCTCTGTGCAAATACTCACTAATAACTACACATTGTCATGTCTTATAATTGTTGCTGCTCTACAGATGGTAGCCGGAAGGTTTGTGAATGTATACTCCACAAGTGATTGGATGCTTGGAATTGCTTTCCGTGCCAGGTACTGATAAAGATTTTGGAGCTTACTTGAATTCAAGTCAGTTGCTGTGACGCTGTCAACATAGATAGGAGCGATTCTCAATGGGGTTTGTTAGAAAAAGTGACGAGTTTCAAAATAATATAAATTTAGAGTGACAATTTAGGATAAATCTATAAATATTTTACCCCGTCTTGTGATAAATTTTCTTTTACCCCGTCTTCTATACTCGTATTTGCGTGAGAAAGGGAGAGTCATGTAATGAGCAGGGGAAGTGAAGCGTGGATTTCGTCGAGGAGAGGAGTATGTTATTGTTAACAATTGTAAGACTTTCAGCGTTGTGGGGAGAGTAAGTAAGCTCCTAAATCTCTCTGGGCTTGGCCATTCGGGCTCCGTGAAGAAATTGTCTTTATCAAATTTATCTTTAGAGTATATATTTCTTTTCGTACTCTGATCTTGAAATCATTTTTTAAAAAATGATCAACAATAACAAAAATCCTTGCATTCAGTTGGTATCTCACTCTTTTACCGTAAGTGGTCACAGTTAGCATGATTTAGTGCTACATACTTTGGCGACTCAGTCCTATGAATCATCCATAGGACTGTGTCCTTTTTGTTTTTGGCCCTATGATTGGCCTCTCACCCTCCCCTTTTCTGTTCTTTCTGTTTCTCTCCACCCTCTCTCTCAATTTTCGATGGGTTGTTTGTATCTTTCTGATAGAATCTACCACACTTTTCTATTAAAATAAGATAAATCTCCATAGAGGATCTCTCTAAGAGCCAGAGTACAAATACGATAATTCAATGGATGGTAATAAAGACCTAACCTCCTCCCCTATTTATAACCCTAAACCCTAATTTAACCTAATTTAATAAAAGACTAATAATAGGCCCAAGCCCAATACAGTTAAAATAGCAATTAACTTATAACTAATAAATACTAATACTAATATTCCTAAAACTCCAAGGGCCAGATCGTATCAATACTTTCCCCCCCAAGAGCCACCTTGTCCTCAAGGTGTTCTATCTCCGATGCCATCTTTTGCAGCTTAGTCTTCTGGCGAAAAGTCTGTCACATCAACACCCTGGTAATCGTGCGCATCCCGGACGACCCACACATCCAAGTTCTGGAGTTCTTGCTTCTGACAACGATGTCTTGGGACAAATCGTTCATCACAGCGGAAGCATAACCCTTTGTCCTTCCTTGTTCGAATTTCGGCTTCAGTGAGTTTTTTACAAGACGCCGGGTGAACGATTGTAGTCCTGTGAGAACAAGTCTCTGTGCTTCTAGTTCCCGATACAATCGTTCCTGCTTTAGCCTTGACCGTTGTACAAGTACTTTCCTCGTTTTGGGCAACCTGAAAAGAAAAATCATCCTCAATCACTTGGGCCATAAACATTTTCTCTTCTATGCCCACTGGTCGCAGTTTACGCATCGCGCTCTGTATCTCCTCTTTCAGTCCACTTTCCCACTTCCCCTCCAATGCACTCGCATTGATATCGCACATTCCCTTAGGAAAGCACTCAAAGCTCCGACGATATTCCTTCACCGTGCTTATTTGCTTCAAACTCATGAAGTTGGCATATTTATTCGCCTGAGCAGTCGGTTGAAAACGCTCCAACAACCTGTCTTTGAATTCGTTCCAGGAACGAAAAGGAGCACGATCTTCCTTATACTGCAGCCACTCCAATGCCTCCCCTTCTAAACATAACCCCGCTGCCTCAACCCCTTCATATTCAGTCAGCTTGTTTACTAGGAAATAACGCTCGACCCGGCTCAACCATCCCACCGGATCCTCATCAGCAAGATCCTTGAAAATCGGCATCTACAATTTTCTAAATCTCTTGTCACACCCCGGTCCCTCCCTTCCTGCTGCTCTCTGACCTCCCCGTTCAAATCTTTCTTCTCCTCCCCACCCGAAATCTCGTCCCCTATTTCAGACATTGTCACCCCACCAACGATCGTTCCAACCGTCATGTGCCAACGGCCTATCATAGCCCATGCGCAACCTCCTTTCCTCCAGAACCCCGTTTCCTCTCCCCACAACCCTTGGGTCTCCCCTTCGGAGGAAAACATGCCCCGCGGAATTTTCCCCTTCAAAGATCCCCTGAAACCCCTCGCTCTGGTCGTAACCGACTAACCCAGACAGTACCGGCCCAGTCAGCCTGCCCCAACTCGACCTACTCGCGCTCGGACCCTCGCCCAAGCCCCACCCCTCTCTGCCCACCCCAACTGCCCCGACCCCAGCCCGTGTCCTCCAACCCCACACCGGTGCGCCCCTCTGCGCCCCCAAGGCCCCCACAGTTGCCTTGTCCCCCGCAGCCCTGTCCCGCACCTGCCTGCCTGCCTCACTCCCCCACCCACGAGCCCCACGCCCTTGCTCGCAAGCCCGCCCGACCCTGCGCCTGACCTAGACCCACAACCTCACCCCACTGTGCCCCAGGCTTCGCACGCCCCAACGCCCTCAACGCCAGCCCCACCCGAGCCCCAGCTTGCGCATCCCCCTGCACCCGAGCCCCTCCGCTCGTCGAGTTCACCCACGCCACCCCCGCCCGTGCTCCAGCCAACGCGGCCCTCAGCGCCAACCCCTAGCACTACGCCCTCCTTCCGCACCGGCCCCTCGCCCACACCGTCAGACCCTGCCGGTGACGCCGCTGCGACATCCCCCGTCGTCAAGCCCACACCTATCCCTCCCGAATCGATCGACGCCCTTTTCCCCTTGTCCAAGCCGTTCAATTCGGAGATTGGTTGTTCCGGTGTTCGCTCTAGCAACTTCTGTATGTTCAGGTTTATCTGACCTATCTCTTGGTCCAATTGATTTCCCATTGCCGTCAACTGAGCCTCGAATTCTCGTTGTTTCTTCAACATCTCGGCCCCACTTTGCTCGCATTGTTGAACCCTCGTTTCCATCTTAGTAGCAACCATTCCCGGATCGACAAATGGCTCTGATACCAAAATGATAGAATCTACCACACTTTTCTATTAAAATAAGATAAATCTTTAGAGAGGATCTCTCTAAGAGCCAGAGTACAAATATGACAATTCAATGGATACCAAATAAAGACCTAACCTCCCCTATTTATAACCCTAAACCCTAATTTAATAAAAGACTAATAATAGGCCCAAGCCCAATACAGTTAAAATAACAATTAACTAATAACTAATAAATACTAATACTAATACTAATATTCCTAAAACTCCAAGGGCCAGATCGTATCTCTTTCGTTTATGAATGAAAGATGGTTTTAGTTTCGTATAAAAATAAATGTATGAAATATATTTTGGGAGTTTCTCTCTTGTGCTTGGGCAAACATTCCAATCTTACAGTTGTTTTCTCTACAGTCTACTTACTCAAGGGTTAGCTGGAATTCAACCTATCGACGTCCCTGGTATTGAGAATGTAATATTCTTATTCTAGTTCCTCATTGCACCTGTTTAGAATTTTCTGATATTAGTTTATAATTGTACTAGTTAGAAGTTGTTAATGCTTGCATCTTCGTTCAAGTTAAATAATTACCTTTTATTTGTAGTAAGTTATTACAATTAATTGGTACACAATGCTCCAAGTTTGGAATGTAATGATACAACTAAAAGTTTGGGTTCTAATATTTCTAACGGTATTTTGTCTATCCCTAATTATTTGCTGTAAACAAAAGAGAGTGCAGTAATTAGTAGGTGGGTACTTTATTTCTTTCCATGAAGATGGGGCTATTCTCGCAAGAGTATAAATGTTTTATATTTTGCTCTTTTCATTGTAGTCTTTATCATCATAGTTTGACTTCTAAAGTCCATAGAAGCCATGGCACGGTTCGATTAAAGGTCTACTTGTAAAATGTTTCTAGAGTGATTACTTGTTAGTTTCATTCTCTTGTTATTATTACTTTTATTATTGCTACGCCAGAATGACAATGTAGAATTCTCCTCATCTTTAATTTATAGTTTTTGAGCTTCAACTAAGGAGTTATAAATATAGGATTTATTTGAGAGGATTTTACTTGAGGATTATTGTTCAGATTAAAAGTTCAGCTATGATTCGTTGTACTCTTTTTAGCTTAGGGTAGTGTTTTTGCATCTCCTTATATATTTCCAGGTACAAAACTCAATGTTTTTTACTTTTTTTTTATTATTTTATTATTTTTTTTATTTTTCATCTTATTTTGGAGCCATAATAGTTAAGGTTATTCACTGGATTTGCAGGTTGATGTGACAAGTGTCATAGAGGGTCACTCCTCCTATCTCTGGGCTACTCGGCAAATCTTGGAGCAGCTTGAACTGGAAACCTATTATCCAGTTTTTAGAAGCAGTCCTGGAGAGCAATAG

mRNA sequence

ATGCATACCTCATCCTTGTTGCCGCCCACTCATCGCTATGCCGCTGGAGGATTGTTTGCGATTGCCCTTCATCAGGCTCAGATCCATCAGACGCGTCCGCTAGGGCTTTTCCCCGTCGACGATCCTCACTCCGAGGAGCGAACCAGTAGTTGTAGCGCCAGCAGCAGCGATTCCGTCTCTGACGACCCCGAGCTTTGGGTTCATCAATCCTCCGGCCTGCTTCGTCCCGTTTTCAGGTTTTTACAGATTGACTCTCCAGCTTGGTCTGGACTTGAGGAAACTGCAGGATTCGGGACAGCTAAGCATCACATTGGAGCATTCTTACGGTTGCTATCAGAGGACTGTGAAAAATCTTCCGAGATGATAGATCAAGAAGTTGCTATATCAAAAGCTGTCGATGGTATAGCAGATAACATGGAGAATGATATAAGAACTTCTCAGTCTAAGGAAAATTATCGTGAATATGAATATGAATGTCGAGAGAAGTGCTTGTCTGCCGAGGCGAAATCAAATTTGGAAGAAGCTGACAGGCAAGCAGACAATACAGATGGTAATGCAGAGGTTATTAAACAGCTGGGTTTTGGGGCATGGACTGAGACTATTGAGCAACCTATTGATGAGGAAAAAATGCTTAGTTATCAGAGAAAAGTGGTTGTTCTCTATGAGCTTCTATCTGCTTGTTTGGCTGACACAAGTGAAAACGACAAGAAACAATCCCCTCGACAAAGAAAAGGTTATGATGCCCGTCATCGTGTGGCTTTAAGGTTATTATCAACGTGGATTGATATCAAGTGGATAAAAATGGAAGCGATTGAAACAATGATTGCTTGCTCGGCTATGGCTCTAGCTAAAAGTGTGTCTGAGATGGGAGAAGATAACCCTTCAAAGGAGAGTAAGTGGAATAAGTGGAAACGTGGTGGTATTATTGGTGCAGCTGCATTAACGGGAGGGACCTTGTTGGCAATTACAGGAGGATTAGCTGCTCCAGCAATTGCTGCAGGCTTTAGTGCTTTAGCTCCTACATTGGGTACCATCATCCCCGTCATTGGTGCAAGTGGATTTGCTGCAGCTGCCAGTGCTGCAGGAACTGTTGCTGGTTCCGTGGCTGTTGCTGCATCATTTGGTGCTGCTGGAGCAGGACTTACAGGAAGCAAAATGGCTAGGAGAATTGGGAGCATTGATGAGTTCGAATTTAAACCAATTGGAAAAAATCATAACCAAGGGAGATTAGCAGTTGAGATTACAGTGTCAGGCTTTGCATTTGATGAGAAGGATTTCGTTAGGACGTGGGAAGGACTACATGACAACTTGGAAAGGTATGCACTGCAGTGGGAGTCTAAAAATATAATTGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAACACTTGCATTGGAATTGATGAAGCGAGGTGCAATGTTGACTGTTCTGAGCTCCCTTTTAGTAGCACTGGCTTGGCCGGCTACCTTACTTTATGCTACTGATTTCATAGACAGCAAGTGGACAATTGCCGTCGACAGATCAGATAAAGCTGGTAGAATCCTTGCAGATGTGTTGTTGAAAGGTTTACAAGGGAACAGGCCTGTGACACTTGTAGGGTACTCACTTGGTGCACGTGTCATATTCAAGTGTCTCCAATATTTGGCTGAGACTGAAAAAAATGCTGAGCTTGTGGAAAGAGTTGTTCTTCTCGGAGCACCCATATCAATTAAAGATCAGAACTGGGAAGCTGCTAGAAAGATGGTAGCCGGAAGGTTTGTGAATGTATACTCCACAAGTGATTGGATGCTTGGAATTGCTTTCCGTGCCAGTCTACTTACTCAAGGGTTAGCTGGAATTCAACCTATCGACGTCCCTGGTATTGAGAATGTTGATGTGACAAGTGTCATAGAGGGTCACTCCTCCTATCTCTGGGCTACTCGGCAAATCTTGGAGCAGCTTGAACTGGAAACCTATTATCCAGTTTTTAGAAGCAGTCCTGGAGAGCAATAG

Coding sequence (CDS)

ATGCATACCTCATCCTTGTTGCCGCCCACTCATCGCTATGCCGCTGGAGGATTGTTTGCGATTGCCCTTCATCAGGCTCAGATCCATCAGACGCGTCCGCTAGGGCTTTTCCCCGTCGACGATCCTCACTCCGAGGAGCGAACCAGTAGTTGTAGCGCCAGCAGCAGCGATTCCGTCTCTGACGACCCCGAGCTTTGGGTTCATCAATCCTCCGGCCTGCTTCGTCCCGTTTTCAGGTTTTTACAGATTGACTCTCCAGCTTGGTCTGGACTTGAGGAAACTGCAGGATTCGGGACAGCTAAGCATCACATTGGAGCATTCTTACGGTTGCTATCAGAGGACTGTGAAAAATCTTCCGAGATGATAGATCAAGAAGTTGCTATATCAAAAGCTGTCGATGGTATAGCAGATAACATGGAGAATGATATAAGAACTTCTCAGTCTAAGGAAAATTATCGTGAATATGAATATGAATGTCGAGAGAAGTGCTTGTCTGCCGAGGCGAAATCAAATTTGGAAGAAGCTGACAGGCAAGCAGACAATACAGATGGTAATGCAGAGGTTATTAAACAGCTGGGTTTTGGGGCATGGACTGAGACTATTGAGCAACCTATTGATGAGGAAAAAATGCTTAGTTATCAGAGAAAAGTGGTTGTTCTCTATGAGCTTCTATCTGCTTGTTTGGCTGACACAAGTGAAAACGACAAGAAACAATCCCCTCGACAAAGAAAAGGTTATGATGCCCGTCATCGTGTGGCTTTAAGGTTATTATCAACGTGGATTGATATCAAGTGGATAAAAATGGAAGCGATTGAAACAATGATTGCTTGCTCGGCTATGGCTCTAGCTAAAAGTGTGTCTGAGATGGGAGAAGATAACCCTTCAAAGGAGAGTAAGTGGAATAAGTGGAAACGTGGTGGTATTATTGGTGCAGCTGCATTAACGGGAGGGACCTTGTTGGCAATTACAGGAGGATTAGCTGCTCCAGCAATTGCTGCAGGCTTTAGTGCTTTAGCTCCTACATTGGGTACCATCATCCCCGTCATTGGTGCAAGTGGATTTGCTGCAGCTGCCAGTGCTGCAGGAACTGTTGCTGGTTCCGTGGCTGTTGCTGCATCATTTGGTGCTGCTGGAGCAGGACTTACAGGAAGCAAAATGGCTAGGAGAATTGGGAGCATTGATGAGTTCGAATTTAAACCAATTGGAAAAAATCATAACCAAGGGAGATTAGCAGTTGAGATTACAGTGTCAGGCTTTGCATTTGATGAGAAGGATTTCGTTAGGACGTGGGAAGGACTACATGACAACTTGGAAAGGTATGCACTGCAGTGGGAGTCTAAAAATATAATTGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAACACTTGCATTGGAATTGATGAAGCGAGGTGCAATGTTGACTGTTCTGAGCTCCCTTTTAGTAGCACTGGCTTGGCCGGCTACCTTACTTTATGCTACTGATTTCATAGACAGCAAGTGGACAATTGCCGTCGACAGATCAGATAAAGCTGGTAGAATCCTTGCAGATGTGTTGTTGAAAGGTTTACAAGGGAACAGGCCTGTGACACTTGTAGGGTACTCACTTGGTGCACGTGTCATATTCAAGTGTCTCCAATATTTGGCTGAGACTGAAAAAAATGCTGAGCTTGTGGAAAGAGTTGTTCTTCTCGGAGCACCCATATCAATTAAAGATCAGAACTGGGAAGCTGCTAGAAAGATGGTAGCCGGAAGGTTTGTGAATGTATACTCCACAAGTGATTGGATGCTTGGAATTGCTTTCCGTGCCAGTCTACTTACTCAAGGGTTAGCTGGAATTCAACCTATCGACGTCCCTGGTATTGAGAATGTTGATGTGACAAGTGTCATAGAGGGTCACTCCTCCTATCTCTGGGCTACTCGGCAAATCTTGGAGCAGCTTGAACTGGAAACCTATTATCCAGTTTTTAGAAGCAGTCCTGGAGAGCAATAG

Protein sequence

MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVSDDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSEMIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQADNTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSPRQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKWNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFAFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFRSSPGEQ

Homology

[Close]

BLAST of Sed0023539 vs. NCBI nr
Match: XP_038893576.1 (transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 582/659 (88.32%), Postives = 619/659 (93.93%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +S LPPTHRYA+G LFA+ALHQAQIHQTRPLG F  D   +EERTSSCS SS+DSVS
Sbjct: 1   MQMTSFLPPTHRYASGALFALALHQAQIHQTRPLG-FSDDGARAEERTSSCSGSSTDSVS 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SSGLLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED E +SE
Sbjct: 61  EDPELWVHESSGLLRPVFRFLEIDSAAWSGLEETAGSGTAKHHIGAFLRLLSEDNEDTSE 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VDGIADN+E +   SQSKE YREYEYE REKCLSAEAKSN +EADRQ +
Sbjct: 121 MINQELALSKSVDGIADNLEKNFIISQSKEKYREYEYEWREKCLSAEAKSNSDEADRQTE 180

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           ++DGN  V+KQ    AWTETIEQPI+EEKMLSYQRKVV+LYELLSACLAD S N KKQS 
Sbjct: 181 SSDGNVVVVKQPDDRAWTETIEQPIEEEKMLSYQRKVVILYELLSACLADISVN-KKQS- 240

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 300
           RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETM+ACSAMALAKSV+EMGE +P+KES W
Sbjct: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMVACSAMALAKSVAEMGEGSPTKESNW 300

Query: 301 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360
           +KWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA
Sbjct: 301 DKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360

Query: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFA 420
           AGTVAGSVAVAASFGAAGAGLTGSKMARRIGS+DEFEFK IG+NHNQGRLAVEITVSGFA
Sbjct: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSVDEFEFKSIGENHNQGRLAVEITVSGFA 420

Query: 421 FDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSS 480
           FDEKDF+R WEGL+DN+ERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM+TVLSS
Sbjct: 421 FDEKDFIRPWEGLNDNMERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSS 480

Query: 481 LLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 540
           LLVALAWPATLL ATDFIDSKWTIAVDRSDKAGR+LADVLLKGLQGNRPVTLVGYSLGAR
Sbjct: 481 LLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRMLADVLLKGLQGNRPVTLVGYSLGAR 540

Query: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGI 600
           VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYST+DWMLGI
Sbjct: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTNDWMLGI 600

Query: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFRS 660
           AFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFRS
Sbjct: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFRS 656

[Close]

BLAST of Sed0023539 vs. NCBI nr
Match: TYK16693.1 (transmembrane and coiled-coil domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 577/658 (87.69%), Postives = 614/658 (93.31%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +SLL PT RYA+G LFA+ALHQAQIHQTRPLG FP DD  +EERTSSCS SSSDSVS
Sbjct: 1   MQMTSLLAPTQRYASGALFALALHQAQIHQTRPLG-FPDDDARAEERTSSCSGSSSDSVS 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SSGLLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED + SSE
Sbjct: 61  EDPELWVHESSGLLRPVFRFLEIDSSAWSGLEETAGSGTAKHHIGAFLRLLSEDNDNSSE 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VDGIA+NME +I +SQSKE YREYE E REKCL AEAKS  EE D+Q +
Sbjct: 121 MIEQELALSKSVDGIAENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFDKQTE 180

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           + DGN  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLS CLAD S  DKKQS 
Sbjct: 181 SADGNV-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSDCLADISV-DKKQS- 240

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 300
           RQRKGYDARHR+ALRLLSTWIDIKWIKMEAIETM+ACSAMALAKSV+EMG+++P+KES W
Sbjct: 241 RQRKGYDARHRLALRLLSTWIDIKWIKMEAIETMVACSAMALAKSVAEMGDESPTKESNW 300

Query: 301 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360
           NKWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA
Sbjct: 301 NKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360

Query: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFA 420
           AGTVAGSVAVAASFGAAGAGLTG+KMARRIGSIDEFEFK IG+NHNQGRLAVEITVSGFA
Sbjct: 361 AGTVAGSVAVAASFGAAGAGLTGTKMARRIGSIDEFEFKAIGENHNQGRLAVEITVSGFA 420

Query: 421 FDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSS 480
           FD+KDF+R WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM+TVLSS
Sbjct: 421 FDDKDFIRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSS 480

Query: 481 LLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 540
           LLVALAWPATLL ATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR
Sbjct: 481 LLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 540

Query: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGI 600
           VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYST+DWMLGI
Sbjct: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTNDWMLGI 600

Query: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFR 659
           AFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFR
Sbjct: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFR 654

[Close]

BLAST of Sed0023539 vs. NCBI nr
Match: KAA0044771.1 (transmembrane and coiled-coil domain-containing protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 578/659 (87.71%), Postives = 615/659 (93.32%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +SLL PT RYA+G LFA+ALHQAQIHQTRPLG FP DD  +EERTSSCS SSSDSVS
Sbjct: 1   MQMTSLLAPTQRYASGALFALALHQAQIHQTRPLG-FPDDDARAEERTSSCSGSSSDSVS 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SSGLLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED + SSE
Sbjct: 61  EDPELWVHESSGLLRPVFRFLEIDSSAWSGLEETAGSGTAKHHIGAFLRLLSEDNDNSSE 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VDGIA+NME +I +SQSKE YREYE E REKCL AEAKS  EE D+Q +
Sbjct: 121 MIEQELALSKSVDGIAENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFDKQTE 180

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           + DGN  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLSACLAD S  DKKQS 
Sbjct: 181 SADGNL-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSACLADISV-DKKQS- 240

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 300
           RQRKGYDARHR+ALRLLSTWIDIKWIKMEAIETM+ACSAMALAKSV+EMG+++P+KES W
Sbjct: 241 RQRKGYDARHRLALRLLSTWIDIKWIKMEAIETMVACSAMALAKSVAEMGDESPTKESNW 300

Query: 301 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360
           NKWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA
Sbjct: 301 NKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360

Query: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFA 420
           AGTVAGSVAVAASFGAAGAGLTG+KMARRIGSIDEFEFK IG+NHNQGRLAVEITVSGFA
Sbjct: 361 AGTVAGSVAVAASFGAAGAGLTGTKMARRIGSIDEFEFKAIGENHNQGRLAVEITVSGFA 420

Query: 421 FDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSS 480
           FD+KDF+R WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM+TVLSS
Sbjct: 421 FDDKDFIRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSS 480

Query: 481 LLVALAWPATLLYATDFIDSKWTIAVDR-SDKAGRILADVLLKGLQGNRPVTLVGYSLGA 540
           LLVALAWPATLL ATDFIDSKWTIAVDR SDKAGRILADVLLKGLQGNRPVTLVGYSLGA
Sbjct: 481 LLVALAWPATLLAATDFIDSKWTIAVDRLSDKAGRILADVLLKGLQGNRPVTLVGYSLGA 540

Query: 541 RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLG 600
           RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYST+DWMLG
Sbjct: 541 RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTNDWMLG 600

Query: 601 IAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFR 659
           IAFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFR
Sbjct: 601 IAFRASLLTQGLAGIQPIDVPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFR 655

[Close]

BLAST of Sed0023539 vs. NCBI nr
Match: XP_008453712.1 (PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 1092.0 bits (2823), Expect = 0.0e+00
Identity = 579/670 (86.42%), Postives = 618/670 (92.24%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +SLL PT RYA+G LFA+ALHQAQIHQTRPLG FP DD  +EERTSSCS SSSDSVS
Sbjct: 1   MQMTSLLAPTQRYASGALFALALHQAQIHQTRPLG-FPDDDARAEERTSSCSGSSSDSVS 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SSGLLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED + SSE
Sbjct: 61  EDPELWVHESSGLLRPVFRFLEIDSSAWSGLEETAGSGTAKHHIGAFLRLLSEDNDNSSE 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VDGIA+NME +I +SQSKE YREYE E REKCL AEAKS  EE D+Q +
Sbjct: 121 MIEQELALSKSVDGIAENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFDKQTE 180

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           + DGN  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLS CLAD S  DKKQS 
Sbjct: 181 SADGNV-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSDCLADISV-DKKQS- 240

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIK------MEAIETMIACSAMALAKSVSEMGEDNP 300
           RQRKGYDARHR+ALRLLSTWIDIKWIK      +EAIETM+ACSAMALAKSV+EMG+++P
Sbjct: 241 RQRKGYDARHRLALRLLSTWIDIKWIKNGLHAHLEAIETMVACSAMALAKSVAEMGDESP 300

Query: 301 SKESKWNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGF 360
           +KES WNKWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGF
Sbjct: 301 TKESNWNKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGF 360

Query: 361 AAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEI 420
           AAAASAAGTVAGSVAVAASFGAAGAGLTG+KMARRIGSIDEFEFK IG+NHNQGRLAVEI
Sbjct: 361 AAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRIGSIDEFEFKAIGENHNQGRLAVEI 420

Query: 421 TVSGFAFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAM 480
           TVSGFAFD+KDF+R WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM
Sbjct: 421 TVSGFAFDDKDFIRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAM 480

Query: 481 LTVLSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVG 540
           +TVLSSLLVALAWPATLL ATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVG
Sbjct: 481 MTVLSSLLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVG 540

Query: 541 YSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTS 600
           YSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYST+
Sbjct: 541 YSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTN 600

Query: 601 DWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYY 660
           DWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYY
Sbjct: 601 DWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTDVIEGHSSYLWATRQILEQLELETYY 660

Query: 661 PVFRSSPGEQ 665
           PVFRSS  +Q
Sbjct: 661 PVFRSSSHKQ 666

[Close]

BLAST of Sed0023539 vs. NCBI nr
Match: XP_011653146.1 (transmembrane and coiled-coil domain-containing protein 4 [Cucumis sativus] >KGN53277.1 hypothetical protein Csa_014638 [Cucumis sativus])

HSP 1 Score: 1089.3 bits (2816), Expect = 0.0e+00
Identity = 574/664 (86.45%), Postives = 614/664 (92.47%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           MH +S L PT RYA G LFA+ALHQAQIHQTRPLG F  DD  +EERTSSCS SSSDSVS
Sbjct: 14  MHMTSFLAPTQRYATGALFALALHQAQIHQTRPLG-FSDDDARAEERTSSCSGSSSDSVS 73

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SS LLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED E SSE
Sbjct: 74  EDPELWVHESSALLRPVFRFLEIDSAAWSGLEETAGSGTAKHHIGAFLRLLSEDNENSSE 133

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VD I +NME +I +SQSKE YREYE E REKCL AEAKS  EE ++Q +
Sbjct: 134 MIEQELALSKSVDAIEENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFNKQTE 193

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           +TDG+  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLSACLAD S N KKQS 
Sbjct: 194 STDGSV-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSACLADISVN-KKQS- 253

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 300
           RQRKGYDARHR+ALRLLSTWIDIKW+KMEAIETM+ACSAMALAKSV+EMGE++P+KES W
Sbjct: 254 RQRKGYDARHRLALRLLSTWIDIKWMKMEAIETMVACSAMALAKSVAEMGEESPTKESNW 313

Query: 301 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360
           +KWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA
Sbjct: 314 DKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 373

Query: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFA 420
           AGTVAGSVAVAASFGAAGAGLTG+KMARRIGS+DEFEFK IG+NHNQGRLAVEITVSGFA
Sbjct: 374 AGTVAGSVAVAASFGAAGAGLTGTKMARRIGSVDEFEFKAIGENHNQGRLAVEITVSGFA 433

Query: 421 FDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSS 480
           FD+KDFVR WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM+TVLSS
Sbjct: 434 FDDKDFVRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSS 493

Query: 481 LLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 540
           LLVALAWPATLL ATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR
Sbjct: 494 LLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 553

Query: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGI 600
           VIFKCLQYLAETEKNAELVE+VVLLGAPISIKDQNWEAARKMVAGRFVNVYST+DWMLGI
Sbjct: 554 VIFKCLQYLAETEKNAELVEKVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTNDWMLGI 613

Query: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFRSS 660
           AFRASLLTQGLAGIQPID+PGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFRSS
Sbjct: 614 AFRASLLTQGLAGIQPIDIPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFRSS 673

Query: 661 PGEQ 665
              Q
Sbjct: 674 SDRQ 673

[Close]

BLAST of Sed0023539 vs. ExPASy Swiss-Prot
Match: Q5TGY1 (Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TMCO4 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-68
Identity = 160/412 (38.83%), Postives = 246/412 (59.71%), Query Frame = 0


Query: 246 YDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKWNKWKR 305
           YDAR RV +  +++ + +   +++ +E M   S   + +  SEM E +  K+    KWKR
Sbjct: 130 YDARARVLVCHMTSLLQVPLEELDVLEEMFLESLKEIKEEESEMAEASRKKKENRRKWKR 189

Query: 306 GGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVA 365
             +IG A + GGT++ +TGGLAAP +AAG +           +IG++G AA  SAAG   
Sbjct: 190 YLLIGLATVGGGTVIGVTGGLAAPLVAAGAAT----------IIGSAGAAALGSAAG--- 249

Query: 366 GSVAVAAS-FGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFAFDEK 425
             +A+  S FGAAGAGLTG KM +R+G+I+EF F P+ +     +L + I V+G+    K
Sbjct: 250 --IAIMTSLFGAAGAGLTGYKMKKRVGAIEEFTFLPLTEGR---QLHITIAVTGWLASGK 309

Query: 426 --DFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSSLL 485
              F   W  L  + E+Y L WE+K ++ +  A++  + S LA  + +     TVLS ++
Sbjct: 310 YRTFSAPWAALAHSREQYCLAWEAKYLMELGNALET-ILSGLANMVAQEALKYTVLSGIV 369

Query: 486 VALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGARVI 545
            AL WPA+LL   + ID+ W + + RS + G+ LA +LL   QG RPVTL+G+SLGARVI
Sbjct: 370 AALTWPASLLSVANVIDNPWGVCLHRSAEVGKHLAHILLSRQQGRRPVTLIGFSLGARVI 429

Query: 546 FKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGIAF 605
           + CLQ +A+ +    ++E V+LLGAP+  + ++WE  RK+V+GR +N Y   DW+L   +
Sbjct: 430 YFCLQEMAQEKDCQGIIEDVILLGAPVEGEAKHWEPFRKVVSGRIINGYCRGDWLLSFVY 489

Query: 606 RASLLTQGLAGIQPIDVPG--IENVDVTSVIEGHSSYLWATRQILEQLELET 653
           R S +   +AG+QP+ +    +ENVD+TSV+ GH  Y      IL+ + + T
Sbjct: 490 RTSSVQLRVAGLQPVLLQDRRVENVDLTSVVSGHLDYAKQMDAILKAVGIRT 522

[Close]

BLAST of Sed0023539 vs. ExPASy Swiss-Prot
Match: Q91WU4 (Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tmco4 PE=2 SV=2)

HSP 1 Score: 252.7 bits (644), Expect = 1.2e-65
Identity = 154/411 (37.47%), Postives = 244/411 (59.37%), Query Frame = 0


Query: 246 YDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKWNKWKR 305
           YDAR RV +  +++ + +   +++ +E +   S     +  SE  E +  ++ K  KWKR
Sbjct: 127 YDARARVLVCHVTSLLQVPMEELDILEEVFLESLKDAKEEESETAEASRKRKEKRRKWKR 186

Query: 306 GGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVA 365
             +IG A + GGT++ +TGGLAAP +AAG +           +IG++G    A+A G+VA
Sbjct: 187 YLLIGLATVGGGTVIGVTGGLAAPLVAAGAAT----------IIGSAG----AAALGSVA 246

Query: 366 GSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGF--AFDE 425
           G   + + FGAAGAGLTG KM +R+G+I+EF F P+ +     +L + I ++G+  +   
Sbjct: 247 GIAVMTSLFGAAGAGLTGYKMKKRVGAIEEFMFLPLTEGR---QLHITIAITGWLGSGRY 306

Query: 426 KDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSSLLV 485
           + F   W  L  + E+Y L WE+K ++ +  A++  + S LA  + +     TVLS ++ 
Sbjct: 307 RTFNAPWMALARSQEQYCLAWEAKYLMELGNALET-ILSGLANMVAQEALKYTVLSGIVA 366

Query: 486 ALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGARVIF 545
           AL WPA+LL   + ID+ W + + RS + G+ LA +LL   QG RPVTL+G+SLGARVI+
Sbjct: 367 ALTWPASLLSVANVIDNPWGVCLHRSAEVGKHLAHILLSRQQGRRPVTLIGFSLGARVIY 426

Query: 546 KCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGIAFR 605
            CLQ +A+ +    ++E VVLLGAP+    ++WE  R +V+GR +N Y   DW+L   +R
Sbjct: 427 FCLQEMAQEQDCQGIIEDVVLLGAPVEGDPKHWEPFRNVVSGRIINGYCRGDWLLSFVYR 486

Query: 606 ASLLTQGLAGIQPIDVPG--IENVDVTSVIEGHSSYLWATRQILEQLELET 653
            S +   +AG+QP+ +    +ENVD+TSV+ GH  Y      IL+ + + T
Sbjct: 487 TSSVQLRVAGLQPVLLQDRRMENVDLTSVVNGHLDYAKQMDAILKVVGIRT 519

[Close]

BLAST of Sed0023539 vs. ExPASy Swiss-Prot
Match: Q499U8 (Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Tmco4 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.2e-63
Identity = 152/411 (36.98%), Postives = 241/411 (58.64%), Query Frame = 0


Query: 246 YDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKWNKWKR 305
           YDAR RV +  + + + +   +++ +E +   S     +  SE  E++  ++ K  KWKR
Sbjct: 127 YDARARVLVCHVISLLQVPMEELDILEEVFLESLKDAKEEESETAEESRKRKEKRRKWKR 186

Query: 306 GGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVA 365
             +IG A + GGT++ +TGGLAAP +AAG +           +IG++G    A+A G+VA
Sbjct: 187 YLLIGLATVGGGTVIGVTGGLAAPLVAAGAAT----------IIGSAG----AAALGSVA 246

Query: 366 GSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGF--AFDE 425
           G   + + FGAAGAGLTG KM +R+G+I+EF F P+       +L + I ++G+  +   
Sbjct: 247 GIAVMTSLFGAAGAGLTGYKMKKRVGAIEEFMFLPLTDGK---QLHITIAITGWLGSGRY 306

Query: 426 KDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSSLLV 485
           + F   W  L  + E+Y L WE+K ++ +  A++  + S LA  + +     TVLS ++ 
Sbjct: 307 RTFNAPWMALARSQEQYCLAWEAKYLMELGNALET-ILSGLANMVAQEALKYTVLSGIVA 366

Query: 486 ALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGARVIF 545
           AL  PA+LL   + ID+ W + + RS + G+ LA +LL   QG RPVTL+G+SLGARVI+
Sbjct: 367 ALTLPASLLSVANVIDNPWGVCLHRSAEVGKHLAHILLSRQQGRRPVTLIGFSLGARVIY 426

Query: 546 KCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGIAFR 605
            CLQ +A+ +    ++E VVLLGAP+    + WE  R +V+GR +N Y   DW+L   +R
Sbjct: 427 FCLQEMAQEQDCQGIIEDVVLLGAPVEGDPKYWEPFRNVVSGRIINGYCRGDWLLSFVYR 486

Query: 606 ASLLTQGLAGIQPIDVPG--IENVDVTSVIEGHSSYLWATRQILEQLELET 653
            S +   +AG+QP+ +    +ENVD++SV+ GH  Y      IL+ + + T
Sbjct: 487 TSSVQLRVAGLQPVLLQDRRMENVDLSSVVNGHLDYAKKMDVILKAVGIRT 519

[Close]

BLAST of Sed0023539 vs. ExPASy Swiss-Prot
Match: Q20035 (Uncharacterized membrane protein F35D11.3 OS=Caenorhabditis elegans OX=6239 GN=F35D11.3 PE=3 SV=2)

HSP 1 Score: 214.2 bits (544), Expect = 4.6e-54
Identity = 136/407 (33.42%), Postives = 220/407 (54.05%), Query Frame = 0


Query: 246 YDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKWNKWKR 305
           YD+R+RV LR L+T + + W + E +E  +A + +      SE       K ++  K KR
Sbjct: 158 YDSRYRVFLRHLTTLLGVVWTEFEDVEDSLASTLLEEQFVESEHSRTVREKTARNKKIKR 217

Query: 306 GGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVA 365
             +IGAA   GG L+ +TGGLAAP +AA    L          IG    A  A    T A
Sbjct: 218 YLMIGAAGGVGGVLIGLTGGLAAPLVAASAGML----------IGGGAVAGLA----TTA 277

Query: 366 GSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGF----AF 425
           G+  +  + G AGAG TG KM +R+G+I+EF  + + +  +   L+  + VSG+      
Sbjct: 278 GAAVLGTTMGVAGAGFTGYKMKKRVGAIEEFSVETLSEGVS---LSCSLVVSGWIESDTS 337

Query: 426 DEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSSL 485
            ++ FV  W  L    E+Y L++ES  ++ +  AI ++L S      +++  + T L+ L
Sbjct: 338 PDQAFVHQWRHLRHTKEQYTLRYESNYLMELGNAI-EYLMSFAVSVAIQQTLLETALAGL 397

Query: 486 LVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGARV 545
           + A+AWP  L+  +  +D+ W + V R+ + G  LA+VLL    G RP+TL+G+SLGARV
Sbjct: 398 VSAVAWPVALMSVSSVLDNPWNVCVSRAAEVGEQLAEVLLSRSHGKRPITLIGFSLGARV 457

Query: 546 IFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGIA 605
           IF CL  +++  ++  ++E V+LLGAP++   + W     +V+GR +N Y  +DW+L   
Sbjct: 458 IFHCLLTMSKRSESVGIIEDVILLGAPVTASPKEWSKVCTVVSGRVINGYCETDWLLRFL 517

Query: 606 FRASLLTQGLAGIQPID---VPGIENVDVTSVIEGHSSYLWATRQIL 646
           +R       +AG  PID      I N +++ +++GH  Y     ++L
Sbjct: 518 YRTMSAQFRIAGTGPIDNRNSKKIYNYNLSHIVKGHMDYSKRLTEVL 546

[Close]

BLAST of Sed0023539 vs. ExPASy Swiss-Prot
Match: O14244 (Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC6F6.13c PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.0e-45
Identity = 142/402 (35.32%), Postives = 217/402 (53.98%), Query Frame = 0


Query: 246 YDARHRVALRLLSTWIDIK-----WIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 305
           YD R R  L  +   +DI        +   +ET+       L    S   E       K 
Sbjct: 291 YDCRSRSLLMAVGEVLDINEFDVAKFEKHIVETIQIDDTGELEAGSSANTEAVMKLRRKV 350

Query: 306 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 365
           ++ K+  ++G A + GG ++ ++ GL AP I+AG       +G     +G SG A +   
Sbjct: 351 SRRKKYILMGLAGIGGGLVIGLSSGLLAPIISAG-------IGAAFTTVGLSGVATSGFL 410

Query: 366 AGTVAGSVAVAASFGA-AGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGF 425
           AG   GS A+  + GA +GA +  + MA R   +  FEF+P+   H Q R  V +TVSG+
Sbjct: 411 AG--GGSAALITAGGAISGAHIGTTGMAHRKADVKTFEFRPL---HAQRRANVIVTVSGW 470

Query: 426 AFDEKDFVRTWEGLHDNL--ERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTV 485
              ++D VR      D +  + Y++ WE + ++A +    + L + +  + +++    TV
Sbjct: 471 MLSKEDDVRLSFATLDPIVGDIYSVFWEPE-MLASAGQTMNILATEVVTQSLQQVLGSTV 530

Query: 486 LSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSL 545
           L SL+ AL WP  L      ID+ W  ++DR+   G++LAD+L     G RPVTLVGYSL
Sbjct: 531 LVSLMGALQWPLILTKLGYLIDNPWNNSLDRAKATGQLLADMLCYRSLGVRPVTLVGYSL 590

Query: 546 GARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWM 605
           GARVI+ CL+ L E +K   ++E V L G P+  K  +W  A  +V+GRFVN Y  +DW+
Sbjct: 591 GARVIYYCLREL-EKKKEFSIIENVYLFGTPVIFKRTSWLKAASVVSGRFVNGYKKNDWI 650

Query: 606 LGIAFRASLLTQG-LAGIQPID-VPGIENVDVTSVIEGHSSY 638
           LG  FRA+    G +AG++ ID +PGIEN+DVT+++ GH +Y
Sbjct: 651 LGYLFRATSGGIGRVAGLRQIDCIPGIENIDVTNLVSGHLAY 678

[Close]

BLAST of Sed0023539 vs. ExPASy TrEMBL
Match: A0A5D3CXR2 (Transmembrane and coiled-coil domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005260 PE=3 SV=1)

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 577/658 (87.69%), Postives = 614/658 (93.31%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +SLL PT RYA+G LFA+ALHQAQIHQTRPLG FP DD  +EERTSSCS SSSDSVS
Sbjct: 1   MQMTSLLAPTQRYASGALFALALHQAQIHQTRPLG-FPDDDARAEERTSSCSGSSSDSVS 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SSGLLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED + SSE
Sbjct: 61  EDPELWVHESSGLLRPVFRFLEIDSSAWSGLEETAGSGTAKHHIGAFLRLLSEDNDNSSE 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VDGIA+NME +I +SQSKE YREYE E REKCL AEAKS  EE D+Q +
Sbjct: 121 MIEQELALSKSVDGIAENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFDKQTE 180

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           + DGN  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLS CLAD S  DKKQS 
Sbjct: 181 SADGNV-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSDCLADISV-DKKQS- 240

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 300
           RQRKGYDARHR+ALRLLSTWIDIKWIKMEAIETM+ACSAMALAKSV+EMG+++P+KES W
Sbjct: 241 RQRKGYDARHRLALRLLSTWIDIKWIKMEAIETMVACSAMALAKSVAEMGDESPTKESNW 300

Query: 301 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360
           NKWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA
Sbjct: 301 NKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360

Query: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFA 420
           AGTVAGSVAVAASFGAAGAGLTG+KMARRIGSIDEFEFK IG+NHNQGRLAVEITVSGFA
Sbjct: 361 AGTVAGSVAVAASFGAAGAGLTGTKMARRIGSIDEFEFKAIGENHNQGRLAVEITVSGFA 420

Query: 421 FDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSS 480
           FD+KDF+R WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM+TVLSS
Sbjct: 421 FDDKDFIRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSS 480

Query: 481 LLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 540
           LLVALAWPATLL ATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR
Sbjct: 481 LLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 540

Query: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGI 600
           VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYST+DWMLGI
Sbjct: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTNDWMLGI 600

Query: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFR 659
           AFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFR
Sbjct: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFR 654

[Close]

BLAST of Sed0023539 vs. ExPASy TrEMBL
Match: A0A5A7TTD1 (Transmembrane and coiled-coil domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00610 PE=3 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 578/659 (87.71%), Postives = 615/659 (93.32%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +SLL PT RYA+G LFA+ALHQAQIHQTRPLG FP DD  +EERTSSCS SSSDSVS
Sbjct: 1   MQMTSLLAPTQRYASGALFALALHQAQIHQTRPLG-FPDDDARAEERTSSCSGSSSDSVS 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SSGLLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED + SSE
Sbjct: 61  EDPELWVHESSGLLRPVFRFLEIDSSAWSGLEETAGSGTAKHHIGAFLRLLSEDNDNSSE 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VDGIA+NME +I +SQSKE YREYE E REKCL AEAKS  EE D+Q +
Sbjct: 121 MIEQELALSKSVDGIAENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFDKQTE 180

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           + DGN  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLSACLAD S  DKKQS 
Sbjct: 181 SADGNL-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSACLADISV-DKKQS- 240

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 300
           RQRKGYDARHR+ALRLLSTWIDIKWIKMEAIETM+ACSAMALAKSV+EMG+++P+KES W
Sbjct: 241 RQRKGYDARHRLALRLLSTWIDIKWIKMEAIETMVACSAMALAKSVAEMGDESPTKESNW 300

Query: 301 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360
           NKWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA
Sbjct: 301 NKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360

Query: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFA 420
           AGTVAGSVAVAASFGAAGAGLTG+KMARRIGSIDEFEFK IG+NHNQGRLAVEITVSGFA
Sbjct: 361 AGTVAGSVAVAASFGAAGAGLTGTKMARRIGSIDEFEFKAIGENHNQGRLAVEITVSGFA 420

Query: 421 FDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSS 480
           FD+KDF+R WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM+TVLSS
Sbjct: 421 FDDKDFIRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSS 480

Query: 481 LLVALAWPATLLYATDFIDSKWTIAVDR-SDKAGRILADVLLKGLQGNRPVTLVGYSLGA 540
           LLVALAWPATLL ATDFIDSKWTIAVDR SDKAGRILADVLLKGLQGNRPVTLVGYSLGA
Sbjct: 481 LLVALAWPATLLAATDFIDSKWTIAVDRLSDKAGRILADVLLKGLQGNRPVTLVGYSLGA 540

Query: 541 RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLG 600
           RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYST+DWMLG
Sbjct: 541 RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTNDWMLG 600

Query: 601 IAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFR 659
           IAFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFR
Sbjct: 601 IAFRASLLTQGLAGIQPIDVPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFR 655

[Close]

BLAST of Sed0023539 vs. ExPASy TrEMBL
Match: A0A1S3BY37 (transmembrane and coiled-coil domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103494360 PE=3 SV=1)

HSP 1 Score: 1092.0 bits (2823), Expect = 0.0e+00
Identity = 579/670 (86.42%), Postives = 618/670 (92.24%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +SLL PT RYA+G LFA+ALHQAQIHQTRPLG FP DD  +EERTSSCS SSSDSVS
Sbjct: 1   MQMTSLLAPTQRYASGALFALALHQAQIHQTRPLG-FPDDDARAEERTSSCSGSSSDSVS 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SSGLLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED + SSE
Sbjct: 61  EDPELWVHESSGLLRPVFRFLEIDSSAWSGLEETAGSGTAKHHIGAFLRLLSEDNDNSSE 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VDGIA+NME +I +SQSKE YREYE E REKCL AEAKS  EE D+Q +
Sbjct: 121 MIEQELALSKSVDGIAENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFDKQTE 180

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           + DGN  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLS CLAD S  DKKQS 
Sbjct: 181 SADGNV-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSDCLADISV-DKKQS- 240

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIK------MEAIETMIACSAMALAKSVSEMGEDNP 300
           RQRKGYDARHR+ALRLLSTWIDIKWIK      +EAIETM+ACSAMALAKSV+EMG+++P
Sbjct: 241 RQRKGYDARHRLALRLLSTWIDIKWIKNGLHAHLEAIETMVACSAMALAKSVAEMGDESP 300

Query: 301 SKESKWNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGF 360
           +KES WNKWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGF
Sbjct: 301 TKESNWNKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGF 360

Query: 361 AAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEI 420
           AAAASAAGTVAGSVAVAASFGAAGAGLTG+KMARRIGSIDEFEFK IG+NHNQGRLAVEI
Sbjct: 361 AAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRIGSIDEFEFKAIGENHNQGRLAVEI 420

Query: 421 TVSGFAFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAM 480
           TVSGFAFD+KDF+R WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM
Sbjct: 421 TVSGFAFDDKDFIRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAM 480

Query: 481 LTVLSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVG 540
           +TVLSSLLVALAWPATLL ATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVG
Sbjct: 481 MTVLSSLLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVG 540

Query: 541 YSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTS 600
           YSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYST+
Sbjct: 541 YSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTN 600

Query: 601 DWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYY 660
           DWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYY
Sbjct: 601 DWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTDVIEGHSSYLWATRQILEQLELETYY 660

Query: 661 PVFRSSPGEQ 665
           PVFRSS  +Q
Sbjct: 661 PVFRSSSHKQ 666

[Close]

BLAST of Sed0023539 vs. ExPASy TrEMBL
Match: A0A0A0KXZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043930 PE=3 SV=1)

HSP 1 Score: 1089.3 bits (2816), Expect = 0.0e+00
Identity = 574/664 (86.45%), Postives = 614/664 (92.47%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           MH +S L PT RYA G LFA+ALHQAQIHQTRPLG F  DD  +EERTSSCS SSSDSVS
Sbjct: 14  MHMTSFLAPTQRYATGALFALALHQAQIHQTRPLG-FSDDDARAEERTSSCSGSSSDSVS 73

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+SS LLRPVFRFL+IDS AWSGLEETAG GTAKHHIGAFLRLLSED E SSE
Sbjct: 74  EDPELWVHESSALLRPVFRFLEIDSAAWSGLEETAGSGTAKHHIGAFLRLLSEDNENSSE 133

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           MI+QE+A+SK+VD I +NME +I +SQSKE YREYE E REKCL AEAKS  EE ++Q +
Sbjct: 134 MIEQELALSKSVDAIEENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFNKQTE 193

Query: 181 NTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQSP 240
           +TDG+  V+KQ   GAW E IEQPI+EEKMLS+QRKVV+LYELLSACLAD S N KKQS 
Sbjct: 194 STDGSV-VVKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSACLADISVN-KKQS- 253

Query: 241 RQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESKW 300
           RQRKGYDARHR+ALRLLSTWIDIKW+KMEAIETM+ACSAMALAKSV+EMGE++P+KES W
Sbjct: 254 RQRKGYDARHRLALRLLSTWIDIKWMKMEAIETMVACSAMALAKSVAEMGEESPTKESNW 313

Query: 301 NKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 360
           +KWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA
Sbjct: 314 DKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASA 373

Query: 361 AGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGFA 420
           AGTVAGSVAVAASFGAAGAGLTG+KMARRIGS+DEFEFK IG+NHNQGRLAVEITVSGFA
Sbjct: 374 AGTVAGSVAVAASFGAAGAGLTGTKMARRIGSVDEFEFKAIGENHNQGRLAVEITVSGFA 433

Query: 421 FDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLSS 480
           FD+KDFVR WEGL DNLERYALQWESKNIIAVSTAIQDWLTS LA+ELMKRGAM+TVLSS
Sbjct: 434 FDDKDFVRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSS 493

Query: 481 LLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 540
           LLVALAWPATLL ATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR
Sbjct: 494 LLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGAR 553

Query: 541 VIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLGI 600
           VIFKCLQYLAETEKNAELVE+VVLLGAPISIKDQNWEAARKMVAGRFVNVYST+DWMLGI
Sbjct: 554 VIFKCLQYLAETEKNAELVEKVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTNDWMLGI 613

Query: 601 AFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFRSS 660
           AFRASLLTQGLAGIQPID+PGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFRSS
Sbjct: 614 AFRASLLTQGLAGIQPIDIPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFRSS 673

Query: 661 PGEQ 665
              Q
Sbjct: 674 SDRQ 673

[Close]

BLAST of Sed0023539 vs. ExPASy TrEMBL
Match: A0A6J1C5V0 (transmembrane and coiled-coil domain-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC111008247 PE=3 SV=1)

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 566/665 (85.11%), Postives = 608/665 (91.43%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           M  +S+L PT RYA+G LFA+ALHQAQIHQT PLGL P ++P +E+R S  S SSSDSV+
Sbjct: 1   MQMASMLTPTQRYASGALFALALHQAQIHQTLPLGL-PGEEPQTEDRISCSSGSSSDSVA 60

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDCEKSSE 120
           +DPELWVH+S+GLLRPVFRFL+IDS AWSG+EETAG GTAKHHIGAFLRLLSED E SS+
Sbjct: 61  EDPELWVHESTGLLRPVFRFLEIDSAAWSGIEETAGSGTAKHHIGAFLRLLSEDNENSSQ 120

Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQS-KENYREYEYECREKCLSAEAKSNLEEADRQA 180
           MIDQE+A+SK+VD IADNME D  +SQS KE Y EYEY CREKCLSAEAKSN E  D+QA
Sbjct: 121 MIDQELALSKSVDSIADNMEKDFVSSQSKKEKYHEYEYVCREKCLSAEAKSNFEATDKQA 180

Query: 181 DNTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSENDKKQS 240
           + TD N  V+KQ   GAWT+TI QPIDEEKMLSY RKVVVLYELLSACLAD SENDKK S
Sbjct: 181 EITDANPVVVKQPSVGAWTDTIVQPIDEEKMLSYHRKVVVLYELLSACLADISENDKKHS 240

Query: 241 PRQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPSKESK 300
            RQRKGYDARHRVALRLLSTWID+KWIKMEAIETM+ACSAMALAKSV E  E++PSK++ 
Sbjct: 241 -RQRKGYDARHRVALRLLSTWIDVKWIKMEAIETMVACSAMALAKSVEENDEESPSKKTN 300

Query: 301 WNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAAS 360
           W KWKRGGIIGAAALTGGTL+AITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAAS
Sbjct: 301 WAKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAAS 360

Query: 361 AAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEITVSGF 420
           AAG+VAGSVAVAASFGAAGAGLTGSKMARRIGS+DEFEFK IG+NHNQGRLAVEI VSGF
Sbjct: 361 AAGSVAGSVAVAASFGAAGAGLTGSKMARRIGSVDEFEFKSIGENHNQGRLAVEIAVSGF 420

Query: 421 AFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAMLTVLS 480
           AFDE+DFVR WEGL+DNLERYALQWESK+IIAVSTAIQDWLTS LA+ELMKRGAM+TVLS
Sbjct: 421 AFDEEDFVRPWEGLNDNLERYALQWESKHIIAVSTAIQDWLTSRLAMELMKRGAMMTVLS 480

Query: 481 SLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGA 540
           SLL ALAWPATLL ATDFIDS WTIAVDRSDKAGR+LADVL KGLQGNRPVTLVG+SLGA
Sbjct: 481 SLLAALAWPATLLAATDFIDSTWTIAVDRSDKAGRMLADVLCKGLQGNRPVTLVGHSLGA 540

Query: 541 RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSDWMLG 600
           RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYS +DWMLG
Sbjct: 541 RVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSANDWMLG 600

Query: 601 IAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYPVFRS 660
           IAFRASLLTQGLAGIQPIDVPGIENVDVT VIEGHSSYLWATRQILEQLELETYYPVFRS
Sbjct: 601 IAFRASLLTQGLAGIQPIDVPGIENVDVTGVIEGHSSYLWATRQILEQLELETYYPVFRS 660

Query: 661 SPGEQ 665
           S  +Q
Sbjct: 661 SFSKQ 663

[Close]

BLAST of Sed0023539 vs. TAIR 10
Match: AT4G36210.3 (Protein of unknown function (DUF726) )

HSP 1 Score: 869.4 bits (2245), Expect = 1.9e-252
Identity = 463/674 (68.69%), Postives = 545/674 (80.86%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPV--DDPHSEERTSSCSASSSDS 60
           +  +S L PT RYAAG LFAIAL+QAQI+QT+PLG      DD   EER S+C  SS DS
Sbjct: 2   VEATSNLTPTQRYAAGALFAIALNQAQINQTQPLGTPAAEDDDGGDEERRSNC--SSGDS 61

Query: 61  VSDDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDC-EK 120
           VSDDP LWVH++SGLLRPVFR L+IDSPAW GLE+TA    AKHHIGAF RLLSE+  + 
Sbjct: 62  VSDDPSLWVHETSGLLRPVFRCLEIDSPAWLGLEQTACSSPAKHHIGAFTRLLSEEANDA 121

Query: 121 SSEMIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADR 180
           S+EM++QE+A++KA D +  +++  +     KE ++EYE ECREK    E KS   + D+
Sbjct: 122 SAEMVEQEMALAKAADAMVHSIQCSVSIDAKKEKHQEYENECREKYAVPEVKSKDVDLDK 181

Query: 181 QADNTDGNAEVIKQLGFGAWTETI-----------EQPIDEEKMLSYQRKVVVLYELLSA 240
           + D  +  AE   + G  A    I           E+ ++E  +LS+QRK+ VLYELLSA
Sbjct: 182 EKDKKEA-AESAAREGLEAGVVIIDGSHKPEVLENEKSVEEVTLLSHQRKINVLYELLSA 241

Query: 241 CLADTSENDKKQSPRQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSV 300
           CL+D    DKK   R RKGYDARHRVALRLL+TW +I+WIK+EAIETM+ACSAMA+ KS 
Sbjct: 242 CLSDKHHEDKK-CKRCRKGYDARHRVALRLLATWFNIEWIKVEAIETMVACSAMAIQKSA 301

Query: 301 SEMGEDNPSKESKWNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTII 360
              GEDN +  + W KWKRGGIIGAAA+TGGTL+AITGGLAAPAIAAGF ALAPTLGTII
Sbjct: 302 EMKGEDNLTPTTSWAKWKRGGIIGAAAITGGTLMAITGGLAAPAIAAGFGALAPTLGTII 361

Query: 361 PVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHN 420
           PVIGA GFAAAASAAGTVAGSVAVAASFGAAGAGLTG+KMARRIG +DEFEFK IG+NHN
Sbjct: 362 PVIGAGGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRIGDLDEFEFKAIGENHN 421

Query: 421 QGRLAVEITVSGFAFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLAL 480
           QGRLAVE+ V+G  F+E+DFV+ WEGL  NLERY LQWESKN+I VSTAIQDWLTS LA+
Sbjct: 422 QGRLAVEVLVAGVVFEEEDFVKPWEGLTSNLERYTLQWESKNLILVSTAIQDWLTSRLAM 481

Query: 481 ELMKRGAMLTVLSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQG 540
           ELMK+GAM TVL+SLL+ALAWPAT+L A DFIDSKW+IA+DRSDKAGR+LA+VL KGLQG
Sbjct: 482 ELMKQGAMHTVLASLLMALAWPATILVAADFIDSKWSIAIDRSDKAGRLLAEVLQKGLQG 541

Query: 541 NRPVTLVGYSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGR 600
           NRP+TLVG+SLGARVIFKCLQ LAETE+NAELVERVVLLGAPISI  +NW   RKMVAGR
Sbjct: 542 NRPITLVGFSLGARVIFKCLQALAETEQNAELVERVVLLGAPISINSENWRDVRKMVAGR 601

Query: 601 FVNVYSTSDWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILE 660
           F+NVY+T+DW LGIAFRASL++QGLAGIQPI +PGIENVDVT ++EGHSSYLW T+QILE
Sbjct: 602 FINVYATNDWTLGIAFRASLISQGLAGIQPICIPGIENVDVTDMVEGHSSYLWKTQQILE 661

[Close]

BLAST of Sed0023539 vs. TAIR 10
Match: AT2G18100.1 (Protein of unknown function (DUF726) )

HSP 1 Score: 811.2 bits (2094), Expect = 6.1e-235
Identity = 434/665 (65.26%), Postives = 527/665 (79.25%), Query Frame = 0


Query: 1   MHTSSLLPPTHRYAAGGLFAIALHQAQIHQTRPLGLFPVDDPHSEERTSSCSASSSDSVS 60
           +  +S L P+ RYAA  LFAIAL+QAQI Q++PLG+       +   T    +S SD +S
Sbjct: 2   VEATSNLTPSQRYAASALFAIALNQAQISQSKPLGI------PATGSTGEPISSDSDPIS 61

Query: 61  DDPELWVHQSSGLLRPVFRFLQIDSPAWSGLEETAGFGTAKHHIGAFLRLLSEDC----E 120
           D+ +LWVH+ SGLLRPV R LQIDS AW GLEE A    AK HIGAF++LLSED     +
Sbjct: 62  DEADLWVHEVSGLLRPVLRCLQIDSSAWHGLEEIAASTQAKDHIGAFIKLLSEDVSDDDD 121

Query: 121 KSSEMIDQEVAISKAVDGIADNMENDIRTSQSK-ENYREYEYECREKCLSAEAKSNLEEA 180
            SSEM+++E A++KA D +  N+ +   + +SK E + E+E ECR+K    EA+S  E  
Sbjct: 122 DSSEMVEKETALAKAADAMDQNIRSSSLSVESKMEKHVEFENECRDKYSVPEAQSGAEVK 181

Query: 181 DRQADNTDGNAEVIKQLGFGAWTETIEQPIDEEKMLSYQRKVVVLYELLSACLADTSEND 240
           + +   + G  E I+  G        E+P+ E  +LS++RK+ VLYELLSACLAD  E +
Sbjct: 182 ETE---SHGEGE-IRDGGHNLGIVEHEKPVGEVALLSHERKINVLYELLSACLADKHE-E 241

Query: 241 KKQSPRQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEMGEDNPS 300
            +   R+RKGYDARH VALRLL+TW D +WIKMEA+ETM ACSAMAL KS     E++ S
Sbjct: 242 NEICTRRRKGYDARHHVALRLLATWFDFQWIKMEAVETMSACSAMALQKSSGNKEEESLS 301

Query: 301 KESKWNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFA 360
             S+W KWKRGGI+GAAALTGGTL+AITGGLAAPAIAAGF ALAPTLGTI+PVIGASGFA
Sbjct: 302 PNSEWAKWKRGGIVGAAALTGGTLMAITGGLAAPAIAAGFGALAPTLGTIVPVIGASGFA 361

Query: 361 AAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGRLAVEIT 420
           AAA AAGTVAGSVAVAASFGAAGAGLTG+KMARR G I+EFEFK IG+NHNQGRLAVEI 
Sbjct: 362 AAAEAAGTVAGSVAVAASFGAAGAGLTGTKMARRTGDIEEFEFKAIGENHNQGRLAVEIL 421

Query: 421 VSGFAFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELMKRGAML 480
           V+GF   E+DFV+ WEGL  NLERY +QWES+NIIAVSTAIQDWLTS +A+ELM++GAM 
Sbjct: 422 VAGFVLKEEDFVKPWEGLTSNLERYTVQWESENIIAVSTAIQDWLTSRVAMELMRQGAMR 481

Query: 481 TVLSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGY 540
           TVL+SLL A+ WPAT+L A DFIDS+W+IA+DRSDKAG++LA+ L KGLQGNRPVTLVG+
Sbjct: 482 TVLNSLLAAMVWPATILVAADFIDSRWSIAIDRSDKAGKLLAEALRKGLQGNRPVTLVGF 541

Query: 541 SLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTSD 600
           SLGARV+FKCLQ LAETEKNAE+VERVVLLGAPISIK++NW   RKMVAGRF+NVY+T+D
Sbjct: 542 SLGARVVFKCLQTLAETEKNAEIVERVVLLGAPISIKNENWRDVRKMVAGRFINVYATND 601

Query: 601 WMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLELETYYP 660
           W LG+AFRASLL+QGLAGIQP+ +PGIE+VDVT ++EGHSSYLW T+QILE+LEL+  YP
Sbjct: 602 WTLGVAFRASLLSQGLAGIQPVCIPGIEDVDVTDMVEGHSSYLWKTQQILERLELDNSYP 655

[Close]

BLAST of Sed0023539 vs. TAIR 10
Match: AT4G36210.1 (Protein of unknown function (DUF726) )

HSP 1 Score: 727.6 bits (1877), Expect = 8.8e-210
Identity = 383/551 (69.51%), Postives = 452/551 (82.03%), Query Frame = 0


Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           M++QE+A++KA D +  +++  +     KE ++EYE ECREK    E KS   + D++ D
Sbjct: 1   MVEQEMALAKAADAMVHSIQCSVSIDAKKEKHQEYENECREKYAVPEVKSKDVDLDKEKD 60

Query: 181 NTDGNAEVIKQLGFGAWTETI-----------EQPIDEEKMLSYQRKVVVLYELLSACLA 240
             +  AE   + G  A    I           E+ ++E  +LS+QRK+ VLYELLSACL+
Sbjct: 61  KKEA-AESAAREGLEAGVVIIDGSHKPEVLENEKSVEEVTLLSHQRKINVLYELLSACLS 120

Query: 241 DTSENDKKQSPRQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEM 300
           D    DKK   R RKGYDARHRVALRLL+TW +I+WIK+EAIETM+ACSAMA+ KS    
Sbjct: 121 DKHHEDKK-CKRCRKGYDARHRVALRLLATWFNIEWIKVEAIETMVACSAMAIQKSAEMK 180

Query: 301 GEDNPSKESKWNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVI 360
           GEDN +  + W KWKRGGIIGAAA+TGGTL+AITGGLAAPAIAAGF ALAPTLGTIIPVI
Sbjct: 181 GEDNLTPTTSWAKWKRGGIIGAAAITGGTLMAITGGLAAPAIAAGFGALAPTLGTIIPVI 240

Query: 361 GASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGR 420
           GA GFAAAASAAGTVAGSVAVAASFGAAGAGLTG+KMARRIG +DEFEFK IG+NHNQGR
Sbjct: 241 GAGGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRIGDLDEFEFKAIGENHNQGR 300

Query: 421 LAVEITVSGFAFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELM 480
           LAVE+ V+G  F+E+DFV+ WEGL  NLERY LQWESKN+I VSTAIQDWLTS LA+ELM
Sbjct: 301 LAVEVLVAGVVFEEEDFVKPWEGLTSNLERYTLQWESKNLILVSTAIQDWLTSRLAMELM 360

Query: 481 KRGAMLTVLSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRP 540
           K+GAM TVL+SLL+ALAWPAT+L A DFIDSKW+IA+DRSDKAGR+LA+VL KGLQGNRP
Sbjct: 361 KQGAMHTVLASLLMALAWPATILVAADFIDSKWSIAIDRSDKAGRLLAEVLQKGLQGNRP 420

Query: 541 VTLVGYSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVN 600
           +TLVG+SLGARVIFKCLQ LAETE+NAELVERVVLLGAPISI  +NW   RKMVAGRF+N
Sbjct: 421 ITLVGFSLGARVIFKCLQALAETEQNAELVERVVLLGAPISINSENWRDVRKMVAGRFIN 480

Query: 601 VYSTSDWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLE 660
           VY+T+DW LGIAFRASL++QGLAGIQPI +PGIENVDVT ++EGHSSYLW T+QILE+LE
Sbjct: 481 VYATNDWTLGIAFRASLISQGLAGIQPICIPGIENVDVTDMVEGHSSYLWKTQQILERLE 540

[Close]

BLAST of Sed0023539 vs. TAIR 10
Match: AT4G36210.2 (Protein of unknown function (DUF726) )

HSP 1 Score: 618.6 bits (1594), Expect = 5.8e-177
Identity = 342/551 (62.07%), Postives = 411/551 (74.59%), Query Frame = 0


Query: 121 MIDQEVAISKAVDGIADNMENDIRTSQSKENYREYEYECREKCLSAEAKSNLEEADRQAD 180
           M++QE+A++KA D +  +++  +     KE ++EYE ECREK    E KS   + D++ D
Sbjct: 1   MVEQEMALAKAADAMVHSIQCSVSIDAKKEKHQEYENECREKYAVPEVKSKDVDLDKEKD 60

Query: 181 NTDGNAEVIKQLGFGAWTETI-----------EQPIDEEKMLSYQRKVVVLYELLSACLA 240
             +  AE   + G  A    I           E+ ++E  +LS+QRK+ VLYELLSACL+
Sbjct: 61  KKEA-AESAAREGLEAGVVIIDGSHKPEVLENEKSVEEVTLLSHQRKINVLYELLSACLS 120

Query: 241 DTSENDKKQSPRQRKGYDARHRVALRLLSTWIDIKWIKMEAIETMIACSAMALAKSVSEM 300
           D    DKK   R RKGYDARHRVALRLL+TW +I+WIK+EAIETM+ACSAMA+ KS    
Sbjct: 121 DKHHEDKK-CKRCRKGYDARHRVALRLLATWFNIEWIKVEAIETMVACSAMAIQKSAEMK 180

Query: 301 GEDNPSKESKWNKWKRGGIIGAAALTGGTLLAITGGLAAPAIAAGFSALAPTLGTIIPVI 360
           GEDN +  + W KWKRGGIIGAAA+TGGTL+AITGGLAAPAIAAGF ALAPTLGTIIPVI
Sbjct: 181 GEDNLTPTTSWAKWKRGGIIGAAAITGGTLMAITGGLAAPAIAAGFGALAPTLGTIIPVI 240

Query: 361 GASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGSIDEFEFKPIGKNHNQGR 420
           GA GFAAAASAAGTVAGSVAVAASFGAAGAGLTG+KMARRIG +DEFEFK IG+NHNQGR
Sbjct: 241 GAGGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRIGDLDEFEFKAIGENHNQGR 300

Query: 421 LAVEITVSGFAFDEKDFVRTWEGLHDNLERYALQWESKNIIAVSTAIQDWLTSTLALELM 480
           LAVE+ V+G  F+E+DFV+ WEGL  NLERY LQWESKN+I VSTAIQDWLTS LA+ELM
Sbjct: 301 LAVEVLVAGVVFEEEDFVKPWEGLTSNLERYTLQWESKNLILVSTAIQDWLTSRLAMELM 360

Query: 481 KRGAMLTVLSSLLVALAWPATLLYATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRP 540
           K+GAM TVL+SLL+ALAWPAT+L A DFIDSKW+IA+DRSDKAGR+LA+VL KGLQGNR 
Sbjct: 361 KQGAMHTVLASLLMALAWPATILVAADFIDSKWSIAIDRSDKAGRLLAEVLQKGLQGNR- 420

Query: 541 VTLVGYSLGARVIFKCLQYLAETEKNAELVERVVLLGAPISIKDQNWEAARKMVAGRFVN 600
                                   +  +    V ++    S           MVAGRF+N
Sbjct: 421 -----------------------YRFHDCCNEVNIISIFKSY----------MVAGRFIN 480

Query: 601 VYSTSDWMLGIAFRASLLTQGLAGIQPIDVPGIENVDVTSVIEGHSSYLWATRQILEQLE 660
           VY+T+DW LGIAFRASL++QGLAGIQPI +PGIENVDVT ++EGHSSYLW T+QILE+LE
Sbjct: 481 VYATNDWTLGIAFRASLISQGLAGIQPICIPGIENVDVTDMVEGHSSYLWKTQQILERLE 515

The following BLAST results are available for this feature:

BLAST of Sed0023539 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893576.1	0.0e+00	88.32	transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Benin...	[more]
TYK16693.1	0.0e+00	87.69	transmembrane and coiled-coil domain-containing protein 4 [Cucumis melo var. mak...	[more]
KAA0044771.1	0.0e+00	87.71	transmembrane and coiled-coil domain-containing protein 4 [Cucumis melo var. mak...	[more]
XP_008453712.1	0.0e+00	86.42	PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis me...	[more]
XP_011653146.1	0.0e+00	86.45	transmembrane and coiled-coil domain-containing protein 4 [Cucumis sativus] >KGN...	[more]

BLAST of Sed0023539 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5TGY1	1.5e-68	38.83	Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens OX=960...	[more]
Q91WU4	1.2e-65	37.47	Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus OX=100...	[more]
Q499U8	4.2e-63	36.98	Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus O...	[more]
Q20035	4.6e-54	33.42	Uncharacterized membrane protein F35D11.3 OS=Caenorhabditis elegans OX=6239 GN=F...	[more]
O14244	1.0e-45	35.32	Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 9...	[more]

BLAST of Sed0023539 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXR2	0.0e+00	87.69	Transmembrane and coiled-coil domain-containing protein 4 OS=Cucumis melo var. m...	[more]
A0A5A7TTD1	0.0e+00	87.71	Transmembrane and coiled-coil domain-containing protein 4 OS=Cucumis melo var. m...	[more]
A0A1S3BY37	0.0e+00	86.42	transmembrane and coiled-coil domain-containing protein 4 OS=Cucumis melo OX=365...	[more]
A0A0A0KXZ3	0.0e+00	86.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043930 PE=3 SV=1	[more]
A0A6J1C5V0	0.0e+00	85.11	transmembrane and coiled-coil domain-containing protein 4-like OS=Momordica char...	[more]

BLAST of Sed0023539 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36210.3	1.9e-252	68.69	Protein of unknown function (DUF726)	[more]
AT2G18100.1	6.1e-235	65.26	Protein of unknown function (DUF726)	[more]
AT4G36210.1	8.8e-210	69.51	Protein of unknown function (DUF726)	[more]
AT4G36210.2	5.8e-177	62.07	Protein of unknown function (DUF726)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..63
None	No IPR available	PANTHER	PTHR17920:SF16	TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726)	coord: 3..659
IPR007941	Protein of unknown function DUF726	PFAM	PF05277	DUF726	coord: 302..650 e-value: 3.4E-99 score: 332.0
IPR007941	Protein of unknown function DUF726	PANTHER	PTHR17920	TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4	coord: 3..659
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 453..650 e-value: 4.1E-8 score: 35.3
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 506..596

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023539.1	Sed0023539.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity