Sed0023526 (gene) Chayote v1

Overview


Name	Sed0023526
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VQ domain-containing protein
Location	LG14: 24581192 .. 24581919 (+)
RNA-Seq Expression	Sed0023526
Synteny	Sed0023526

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTACACACATGTCTATGAGAAGCGAGCAGTGGGGGGGCCAATTCTACCACCACGGCGGGGCGTCGGACTCTTCCGCGGTCTCACTCGGGGGCCCGAACAACTCGATTTCGAAGCCGAGGCGGCGGTCGAGAGCTTCGCGGAAGGCGCCAACGACGCTGCTTAATGCGAGCACAGCGAATTTCAGGGACTTGGTGCAGCAATTCACCGGGTTCCAGGCGGGCAGGACCGGCGTGGCGTTGGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGCCCGGAGATCACGACCCGACCCATAACCACCTCAGCTTCTCCGACCACGGCAGCCATTTTCAGCTCCGTCAGCCTCCGCCGCCCACGGAGCACCGCTTCCCATTTCGGCCGGAAAGTTCCACCGGCGATAGTGGGTTTTCACGGCCGGCGGCGGAATTGACGGAAATTCAAAATCTGATCGATGAGGATTTGAATTACGATCTTCAGGATTTGGCTATGGAGTTTTCTTCTTCCAATGGGAATTATTCCGGTGGATACTTTCATTGAACAGATAAGATAATTAGATTTCAATTCAAATGTAATTGTTGTAATAACCATATGAACAAGAAACAGTGTTAATTACTAGCTCTAGCAGAATTTATTTTATTTAAATCAACCTTTTTTTTAATCCTCCTATGTACTTCACATCAATATTTATAGTTAATAAATTATTATAATTTGTAGCTGAA

mRNA sequence

TTTACACACATGTCTATGAGAAGCGAGCAGTGGGGGGGCCAATTCTACCACCACGGCGGGGCGTCGGACTCTTCCGCGGTCTCACTCGGGGGCCCGAACAACTCGATTTCGAAGCCGAGGCGGCGGTCGAGAGCTTCGCGGAAGGCGCCAACGACGCTGCTTAATGCGAGCACAGCGAATTTCAGGGACTTGGTGCAGCAATTCACCGGGTTCCAGGCGGGCAGGACCGGCGTGGCGTTGGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGCCCGGAGATCACGACCCGACCCATAACCACCTCAGCTTCTCCGACCACGGCAGCCATTTTCAGCTCCGTCAGCCTCCGCCGCCCACGGAGCACCGCTTCCCATTTCGGCCGGAAAGTTCCACCGGCGATAGTGGGTTTTCACGGCCGGCGGCGGAATTGACGGAAATTCAAAATCTGATCGATGAGGATTTGAATTACGATCTTCAGGATTTGGCTATGGAGTTTTCTTCTTCCAATGGGAATTATTCCGGTGGATACTTTCATTGAACAGATAAGATAATTAGATTTCAATTCAAATGTAATTGTTGTAATAACCATATGAACAAGAAACAGTGTTAATTACTAGCTCTAGCAGAATTTATTTTATTTAAATCAACCTTTTTTTTAATCCTCCTATGTACTTCACATCAATATTTATAGTTAATAAATTATTATAATTTGTAGCTGAA

Coding sequence (CDS)

ATGTCTATGAGAAGCGAGCAGTGGGGGGGCCAATTCTACCACCACGGCGGGGCGTCGGACTCTTCCGCGGTCTCACTCGGGGGCCCGAACAACTCGATTTCGAAGCCGAGGCGGCGGTCGAGAGCTTCGCGGAAGGCGCCAACGACGCTGCTTAATGCGAGCACAGCGAATTTCAGGGACTTGGTGCAGCAATTCACCGGGTTCCAGGCGGGCAGGACCGGCGTGGCGTTGGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGCCCGGAGATCACGACCCGACCCATAACCACCTCAGCTTCTCCGACCACGGCAGCCATTTTCAGCTCCGTCAGCCTCCGCCGCCCACGGAGCACCGCTTCCCATTTCGGCCGGAAAGTTCCACCGGCGATAGTGGGTTTTCACGGCCGGCGGCGGAATTGACGGAAATTCAAAATCTGATCGATGAGGATTTGAATTACGATCTTCAGGATTTGGCTATGGAGTTTTCTTCTTCCAATGGGAATTATTCCGGTGGATACTTTCATTGA

Protein sequence

MSMRSEQWGGQFYHHGGASDSSAVSLGGPNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNHLSFSDHGSHFQLRQPPPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSSNGNYSGGYFH

Homology

[Close]

BLAST of Sed0023526 vs. NCBI nr
Match: XP_038881626.1 (VQ motif-containing protein 22-like [Benincasa hispida])

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-54
Identity = 132/188 (70.21%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 1   MSMRSEQWGGQFYH--HGGASDSSAVSLGGPN---NSISKPRRRSRASRKAPTTLLNAST 60
           MS+ S+QW  QFYH  HGGAS SSA +  GPN   NSISKPRRRSRASRKAPTTLLNAST
Sbjct: 1   MSITSDQWASQFYHHPHGGASPSSATTHHGPNTNTNSISKPRRRSRASRKAPTTLLNAST 60

Query: 61  ANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSHFQ 120
           ANFRDLVQQFTGFQA    + LGSHKGPVNLSFGQ GD    +NH    L FSD G  FQ
Sbjct: 61  ANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDHLHNNHSSVMLPFSD-GQVFQ 120

Query: 121 LRQPPPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSS--N 178
           LRQ  P  EHRFP   +    ++GFSRPAAEL EIQNLIDED NYDLQ+L MEFSSS  N
Sbjct: 121 LRQTSP--EHRFPIPVQ----NNGFSRPAAELMEIQNLIDEDFNYDLQELGMEFSSSSGN 180

[Close]

BLAST of Sed0023526 vs. NCBI nr
Match: XP_008441071.1 (PREDICTED: uncharacterized protein LOC103485295 [Cucumis melo] >ADN34217.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-51
Identity = 129/191 (67.54%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 1   MSMRSEQWGGQFY---HHGGASDSSAVSLGGPN----NSISKPRRRSRASRKAPTTLLNA 60
           MS+ S+QWG QFY    HGGAS SSAV+  GPN    NSISKPRRRSRASRKAPTTLLNA
Sbjct: 1   MSITSDQWGTQFYAHHSHGGASTSSAVAHHGPNTNNSNSISKPRRRSRASRKAPTTLLNA 60

Query: 61  STANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSH 120
           ST+NFRDLVQQFTGF A    + LGSHKGPVNLSFGQ GD    +NH    L FSD G  
Sbjct: 61  STSNFRDLVQQFTGFHAAGASLPLGSHKGPVNLSFGQDGDDHLHNNHPSVMLPFSD-GRL 120

Query: 121 FQLRQPPPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSS- 179
            Q RQ PP  E RFP   ES    +GFS P AEL EI+NLIDEDL+YDLQ+L MEFSSS 
Sbjct: 121 LQRRQQPP--EQRFPVAAES----NGFSVPGAELMEIENLIDEDLSYDLQELGMEFSSSS 180

[Close]

BLAST of Sed0023526 vs. NCBI nr
Match: KAA0052442.1 (VQ domain-containing protein [Cucumis melo var. makuwa] >TYK13380.1 VQ domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 209.1 bits (531), Expect = 3.0e-50
Identity = 128/191 (67.02%), Postives = 138/191 (72.25%), Query Frame = 0


Query: 1   MSMRSEQWGGQFY---HHGGASDSSAVSLGGPN----NSISKPRRRSRASRKAPTTLLNA 60
           MS+ S+QWG QFY    HG AS SSAV+  GPN    NSISKPRRRSRASRKAPTTLLNA
Sbjct: 1   MSITSDQWGTQFYAHHSHGSASTSSAVAHHGPNTNNSNSISKPRRRSRASRKAPTTLLNA 60

Query: 61  STANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSH 120
           ST+NFRDLVQQFTGF A    + LGSHKGPVNLSFGQ GD    +NH    L FSD G  
Sbjct: 61  STSNFRDLVQQFTGFHAAGASLPLGSHKGPVNLSFGQGGDDHLHNNHPSVMLPFSD-GRL 120

Query: 121 FQLRQPPPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSS- 179
            Q RQ PP  E RFP   ES    +GFS P AEL EI+NLIDEDL+YDLQ+L MEFSSS 
Sbjct: 121 LQRRQQPP--EQRFPVAAES----NGFSVPGAELMEIENLIDEDLSYDLQELGMEFSSSS 180

[Close]

BLAST of Sed0023526 vs. NCBI nr
Match: XP_022146640.1 (uncharacterized protein LOC111015794 [Momordica charantia])

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-48
Identity = 126/191 (65.97%), Postives = 141/191 (73.82%), Query Frame = 0


Query: 1   MSMRSEQWGGQFYHHGGASDSSAVSLGGPNNSISKP-RRRSRASRKAPTTLLNASTANFR 60
           MS+ S+QW  QFYH  G +DS+A+  GG  N+ SKP RRRSRASRKAPTTLLNASTANFR
Sbjct: 1   MSVTSDQW-PQFYH--GGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFR 60

Query: 61  DLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTH--NH------LSFSDHGSHFQ 120
           DLVQQFTGFQA    V LG+HKGPVNLSFG PGD +P H  NH      L FSD   HF 
Sbjct: 61  DLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGD-EPLHTLNHPSGSVMLPFSD-ARHFH 120

Query: 121 LRQPPPPTEHRFPFRPESSTGD-SGFSRPAAELTEIQNLIDE--DLNYDLQDLAMEFSSS 178
            RQ  PP EH+F + PE+ +G   G SRPA+EL EIQNL+DE  DLNYDLQ+LAMEFSSS
Sbjct: 121 YRQ--PPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSS 180

[Close]

BLAST of Sed0023526 vs. NCBI nr
Match: KAG6581510.1 (hypothetical protein SDJN03_21512, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034801.1 hypothetical protein SDJN02_04533, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.1 bits (497), Expect = 2.7e-46
Identity = 118/179 (65.92%), Postives = 129/179 (72.07%), Query Frame = 0


Query: 1   MSMRSEQWGGQFYHHGGASDSSAVSLGGP-NNSISKPRRRSRASRKAPTTLLNASTANFR 60
           +S  S+QW  QFY HGGA  S+AV    P NNSISKPRRRSRASRKAPTTLLNASTANFR
Sbjct: 3   ISSSSDQWRAQFYTHGGAPSSTAVPRDAPNNNSISKPRRRSRASRKAPTTLLNASTANFR 62

Query: 61  DLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSHFQLRQP 120
           DLVQQFTGF A    V  GSHKGPVNLSFGQ GD +  +NH    L FSD G HFQLR+ 
Sbjct: 63  DLVQQFTGFHAAGAVVPFGSHKGPVNLSFGQAGD-EFHNNHPSVMLPFSD-GRHFQLRE- 122

Query: 121 PPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSSNGNYSG 175
             P EH  P       G+ GFS  AAEL EIQNLIDEDLNYDL++L MEF SS+GN +G
Sbjct: 123 -TPREHGVPI----PQGNRGFSGAAAELMEIQNLIDEDLNYDLEELGMEFCSSSGNGNG 173

[Close]

BLAST of Sed0023526 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.3e-07
Identity = 49/162 (30.25%), Postives = 76/162 (46.91%), Query Frame = 0


Query: 18  ASDSSAVS--LGGPNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAGRTG 77
           A D++++   L      ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG   G + 
Sbjct: 33  AGDTTSIDSRLSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTG---GPSA 92

Query: 78  VALGSHKGPVNLSFGQPGDHDPTHNHLSFSDHGSHFQLRQPPPPTEHRFPF---RPESST 137
           +A GS  G    +F      DP+      +    +FQ   P  P +  + F         
Sbjct: 93  MAFGS--GNTTSAFSLTSSSDPSAGSSQQAPWQYNFQPHAPLQPPQRPYMFSLNNVNPVV 152

Query: 138 GDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSSNGNYS 174
           G S  + P   ++ +   +D          + E ++SN + S
Sbjct: 153 GYSNMNNPNTMVSGVFGTVDGSGGGGSAPSSKEATNSNSSSS 189

[Close]

BLAST of Sed0023526 vs. ExPASy TrEMBL
Match: E5GCL8 (VQ domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51
Identity = 129/191 (67.54%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 1   MSMRSEQWGGQFY---HHGGASDSSAVSLGGPN----NSISKPRRRSRASRKAPTTLLNA 60
           MS+ S+QWG QFY    HGGAS SSAV+  GPN    NSISKPRRRSRASRKAPTTLLNA
Sbjct: 1   MSITSDQWGTQFYAHHSHGGASTSSAVAHHGPNTNNSNSISKPRRRSRASRKAPTTLLNA 60

Query: 61  STANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSH 120
           ST+NFRDLVQQFTGF A    + LGSHKGPVNLSFGQ GD    +NH    L FSD G  
Sbjct: 61  STSNFRDLVQQFTGFHAAGASLPLGSHKGPVNLSFGQDGDDHLHNNHPSVMLPFSD-GRL 120

Query: 121 FQLRQPPPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSS- 179
            Q RQ PP  E RFP   ES    +GFS P AEL EI+NLIDEDL+YDLQ+L MEFSSS 
Sbjct: 121 LQRRQQPP--EQRFPVAAES----NGFSVPGAELMEIENLIDEDLSYDLQELGMEFSSSS 180

[Close]

BLAST of Sed0023526 vs. ExPASy TrEMBL
Match: A0A1S3B3C3 (uncharacterized protein LOC103485295 OS=Cucumis melo OX=3656 GN=LOC103485295 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51
Identity = 129/191 (67.54%), Postives = 139/191 (72.77%), Query Frame = 0


Query: 1   MSMRSEQWGGQFY---HHGGASDSSAVSLGGPN----NSISKPRRRSRASRKAPTTLLNA 60
           MS+ S+QWG QFY    HGGAS SSAV+  GPN    NSISKPRRRSRASRKAPTTLLNA
Sbjct: 1   MSITSDQWGTQFYAHHSHGGASTSSAVAHHGPNTNNSNSISKPRRRSRASRKAPTTLLNA 60

Query: 61  STANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSH 120
           ST+NFRDLVQQFTGF A    + LGSHKGPVNLSFGQ GD    +NH    L FSD G  
Sbjct: 61  STSNFRDLVQQFTGFHAAGASLPLGSHKGPVNLSFGQDGDDHLHNNHPSVMLPFSD-GRL 120

Query: 121 FQLRQPPPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSS- 179
            Q RQ PP  E RFP   ES    +GFS P AEL EI+NLIDEDL+YDLQ+L MEFSSS 
Sbjct: 121 LQRRQQPP--EQRFPVAAES----NGFSVPGAELMEIENLIDEDLSYDLQELGMEFSSSS 180

[Close]

BLAST of Sed0023526 vs. ExPASy TrEMBL
Match: A0A5D3CPL3 (VQ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0010080 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50
Identity = 128/191 (67.02%), Postives = 138/191 (72.25%), Query Frame = 0


Query: 1   MSMRSEQWGGQFY---HHGGASDSSAVSLGGPN----NSISKPRRRSRASRKAPTTLLNA 60
           MS+ S+QWG QFY    HG AS SSAV+  GPN    NSISKPRRRSRASRKAPTTLLNA
Sbjct: 1   MSITSDQWGTQFYAHHSHGSASTSSAVAHHGPNTNNSNSISKPRRRSRASRKAPTTLLNA 60

Query: 61  STANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSH 120
           ST+NFRDLVQQFTGF A    + LGSHKGPVNLSFGQ GD    +NH    L FSD G  
Sbjct: 61  STSNFRDLVQQFTGFHAAGASLPLGSHKGPVNLSFGQGGDDHLHNNHPSVMLPFSD-GRL 120

Query: 121 FQLRQPPPPTEHRFPFRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSS- 179
            Q RQ PP  E RFP   ES    +GFS P AEL EI+NLIDEDL+YDLQ+L MEFSSS 
Sbjct: 121 LQRRQQPP--EQRFPVAAES----NGFSVPGAELMEIENLIDEDLSYDLQELGMEFSSSS 180

[Close]

BLAST of Sed0023526 vs. ExPASy TrEMBL
Match: A0A6J1CXT5 (uncharacterized protein LOC111015794 OS=Momordica charantia OX=3673 GN=LOC111015794 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.2e-49
Identity = 126/191 (65.97%), Postives = 141/191 (73.82%), Query Frame = 0


Query: 1   MSMRSEQWGGQFYHHGGASDSSAVSLGGPNNSISKP-RRRSRASRKAPTTLLNASTANFR 60
           MS+ S+QW  QFYH  G +DS+A+  GG  N+ SKP RRRSRASRKAPTTLLNASTANFR
Sbjct: 1   MSVTSDQW-PQFYH--GGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFR 60

Query: 61  DLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTH--NH------LSFSDHGSHFQ 120
           DLVQQFTGFQA    V LG+HKGPVNLSFG PGD +P H  NH      L FSD   HF 
Sbjct: 61  DLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGD-EPLHTLNHPSGSVMLPFSD-ARHFH 120

Query: 121 LRQPPPPTEHRFPFRPESSTGD-SGFSRPAAELTEIQNLIDE--DLNYDLQDLAMEFSSS 178
            RQ  PP EH+F + PE+ +G   G SRPA+EL EIQNL+DE  DLNYDLQ+LAMEFSSS
Sbjct: 121 YRQ--PPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSS 180

[Close]

BLAST of Sed0023526 vs. ExPASy TrEMBL
Match: A0A0A0KII5 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526440 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.4e-47
Identity = 125/193 (64.77%), Postives = 135/193 (69.95%), Query Frame = 0


Query: 1   MSMRSEQWGGQFY---HHGGASDSSAVSLGGPN----NSISKPRRRSRASRKAPTTLLNA 60
           MS+ S+QW  QFY    HGG S SSAV+  GPN    NSISKPRRRSRASRKAPTTLLNA
Sbjct: 1   MSITSDQWATQFYGHHSHGGVSTSSAVAHHGPNTNNSNSISKPRRRSRASRKAPTTLLNA 60

Query: 61  STANFRDLVQQFTGFQAGRTGVALGSHKGPVNLSFGQPGDHDPTHNH----LSFSDHGSH 120
           ST+NFRDLVQQFTGF A    + LGSHKGPVNLSFGQ GD    +NH    L FSD G  
Sbjct: 61  STSNFRDLVQQFTGFHAAGASMPLGSHKGPVNLSFGQGGDDHLHNNHPSVMLPFSD-GGL 120

Query: 121 FQLRQPPPPTEHRFPFRPESSTGDSGFSRPAA--ELTEIQNLIDEDLNYDLQDLAMEF-- 179
            Q RQ   P EHRFP   ES    +GFS   A  +L EIQNLIDEDL+YDLQ+L MEF  
Sbjct: 121 LQRRQQATP-EHRFPVPVES----NGFSVAGAADQLMEIQNLIDEDLSYDLQELGMEFCS 180

[Close]

BLAST of Sed0023526 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-08
Identity = 47/124 (37.90%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 26  LGGPNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAGRTGVALGSH-KGP 85
           L   N  ++KP RRRSRASR+ PTTL N  TANFR +VQQFTG   G + VA GS     
Sbjct: 39  LSPDNRRVAKPTRRRSRASRRTPTTLFNTDTANFRAMVQQFTG---GPSAVAFGSSPSSG 98

Query: 86  VNLSFGQP--GDHDPTHNHLSFSDHGSHFQLRQPPPPTEHRFPFRPESSTGDSGFSRPAA 145
            +L+   P  G       + +  +  +H +L Q       + P+   SS   S  S P A
Sbjct: 99  FSLTSSDPTAGVSSSPWQYANLQNQMAHNELMQ------QQRPYMFSSSNNVSTLSYPNA 153

[Close]

BLAST of Sed0023526 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein )

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-08
Identity = 49/162 (30.25%), Postives = 76/162 (46.91%), Query Frame = 0


Query: 18  ASDSSAVS--LGGPNNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAGRTG 77
           A D++++   L      ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG   G + 
Sbjct: 33  AGDTTSIDSRLSPETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTG---GPSA 92

Query: 78  VALGSHKGPVNLSFGQPGDHDPTHNHLSFSDHGSHFQLRQPPPPTEHRFPF---RPESST 137
           +A GS  G    +F      DP+      +    +FQ   P  P +  + F         
Sbjct: 93  MAFGS--GNTTSAFSLTSSSDPSAGSSQQAPWQYNFQPHAPLQPPQRPYMFSLNNVNPVV 152

Query: 138 GDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSSNGNYS 174
           G S  + P   ++ +   +D          + E ++SN + S
Sbjct: 153 GYSNMNNPNTMVSGVFGTVDGSGGGGSAPSSKEATNSNSSSS 189

[Close]

BLAST of Sed0023526 vs. TAIR 10
Match: AT4G20000.1 (VQ motif-containing protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.0e-07
Identity = 60/174 (34.48%), Postives = 77/174 (44.25%), Query Frame = 0


Query: 19  SDSSAVSLG-GPNNSISKPRRRSRASRKA-PTTLLNASTANFRDLVQQFTGFQAGRTGVA 78
           + SS  SLG G   +     RRSRASR+A PTTLLNA+ +NFR LVQ+FTG  AG     
Sbjct: 31  ASSSGSSLGDGGAAAHEAAGRRSRASRRAIPTTLLNANPSNFRALVQKFTGRSAGGES-- 90

Query: 79  LGSHKGPVNLSFGQPG----------DHDPTHNHLS--FSDHGSHFQLRQPPPPTEHRFP 138
               KGPV L FG P             D ++N+L    + H S+ Q       TE    
Sbjct: 91  -NRRKGPVTLDFGSPTTISKEAIFPVSSDRSNNNLDHVVNQHVSNEQRHVTWSGTESMMS 150

Query: 139 FRPESSTGDSGFSRPAAELTEIQNLIDEDLNYDLQDLAMEFSSSNGNYSGGYFH 179
           ++    T  + +S                  YD QDL  E+ S N +Y     H
Sbjct: 151 YQLGEETNSAVYSS----------------GYDDQDLPREY-SGNSSYDESLDH 184

[Close]

BLAST of Sed0023526 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein )

HSP 1 Score: 51.2 bits (121), Expect = 9.8e-07
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 21  SSAVSLGGPNNS---ISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQA 71
           SSA S   P N+   I K ++RSRASR+APTT+L   T+NFR +VQ+FTG  A
Sbjct: 96  SSATSSLPPTNNIGVIKKTKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPA 148

[Close]

BLAST of Sed0023526 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 29  PNNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQA 71
           P +S   PR+R+RASR+APTT+L   T+NFR +VQ+FTG  A
Sbjct: 92  PPSSSRNPRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPA 133

The following BLAST results are available for this feature:

BLAST of Sed0023526 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881626.1	5.9e-54	70.21	VQ motif-containing protein 22-like [Benincasa hispida]	[more]
XP_008441071.1	4.7e-51	67.54	PREDICTED: uncharacterized protein LOC103485295 [Cucumis melo] >ADN34217.1 hypot...	[more]
KAA0052442.1	3.0e-50	67.02	VQ domain-containing protein [Cucumis melo var. makuwa] >TYK13380.1 VQ domain-co...	[more]
XP_022146640.1	1.3e-48	65.97	uncharacterized protein LOC111015794 [Momordica charantia]	[more]
KAG6581510.1	2.7e-46	65.92	hypothetical protein SDJN03_21512, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0023526 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIE6	7.3e-07	30.25	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of Sed0023526 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GCL8	2.3e-51	67.54	VQ domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B3C3	2.3e-51	67.54	uncharacterized protein LOC103485295 OS=Cucumis melo OX=3656 GN=LOC103485295 PE=...	[more]
A0A5D3CPL3	1.5e-50	67.02	VQ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1CXT5	6.2e-49	65.97	uncharacterized protein LOC111015794 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A0A0KII5	4.4e-47	64.77	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526440 PE=4 SV=...	[more]

BLAST of Sed0023526 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15120.1	4.0e-08	37.90	VQ motif-containing protein	[more]
AT3G22160.1	5.2e-08	30.25	VQ motif-containing protein	[more]
AT4G20000.1	2.0e-07	34.48	VQ motif-containing protein	[more]
AT4G39720.1	9.8e-07	54.72	VQ motif-containing protein	[more]
AT1G35830.1	1.7e-06	57.14	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 46..70 e-value: 3.5E-9 score: 36.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..138
None	No IPR available	PANTHER	PTHR33179:SF30	VQ MOTIF PROTEIN	coord: 20..111
IPR039609	VQ motif-containing protein 15/22	PANTHER	PTHR33179	VQ MOTIF-CONTAINING PROTEIN	coord: 20..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023526.1	Sed0023526.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding