Sed0023524 (gene) Chayote v1

Overview


Name	Sed0023524
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S8
Location	LG11: 5701125 .. 5703953 (-)
RNA-Seq Expression	Sed0023524
Synteny	Sed0023524

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAACAAAGAGAAATCACGTTAAACCTAACCTAACCCTAGCCGCATCAAAACCCCTCTCCATCATCCTCTGCAGAAACCAAATCTCTCCCGATTTCTCTCAATCGCTCAAGGTCTGTTCATGATCGCTAATTGTTTCTTGATTACGATTGTTGCGATCTTCATTCTATGTTTGTTTGATTGTTTTGGTTTTGCTCCGTCTCTCCTAGTTCCAGAATGTTGTTTGATGTGATATATTGGAGAGTAATTAGTAATGGATGTCTTCTTTCTGCTCACGGTGATTTGATGGATATGATCGACGTTTGGTAGAAATTGTTGTCTGAACTGAGGCGTGGTGGTGTTTTGGCTAATGCCTGATTTTCGACATTCTCTTTGCAATTCTTGTCTATTTAGTTGTTGATTTTCAGCTTTAGAATGTAGTGATTGTCAATTTTCCATAGATCTGATTAGCTTCCCGTGAGCGTTTGTTTGAATTGTTATATCTCAGGTTTTGACTTCTGTTTAATTGTTGGTTGAGGGTTTTAATGCAATTTGAGAATTTTAGAAGTTCTGCAAGTGTTATTAGTACTTTTTTGTGTTTTTGAATTTTGGAGCTGTATTAGAAGATTTATTGTAAAATGAGTGATGATTTTGGTTGATAATGCTATTCTAGTTCTTATTAAAATAAATTCATTAAAATTTTAATTTTCAGCAAGCAGCTGGGTTGGGACATTGCTTTTTGGTCATTGTTCGTTTTCCAAACGAAAACAAAATGTTTAAAGCCTTGGTGATCTACATAACCACCCTTACTCTAGTAAAACAAAGTCTTGTATGCTGTAGAACTGAACTCTTAAGTTATATTTGGCCGAGTTAAGAAAACAGATTATAAAATGAAATGAATGGGAAAAGATACAGAGGCCTATGGCCTCTACAGGAAATCTACTTTTGTTTTCATACCTGAATTTTTCATCTTTTTATAAATTTCTTTTTGATCTTTCTTTATTTCCTTGAAAGGTTAAGTCTTAGGGTTTGAGGGTTGCTTGATATTTCTTTCAGGAGCCATAGACTGCTCTTCATTTTAAGAGCTCTCGTTTTCCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTAACTACTACTTTTATTTTGCTGAGTGCAATTCTATTAATCAACTTTTCCTACATTAATTTCTAATAGATGAATTTACGTTTTATACTTTTCTTTCTCTGCTTGGTTTCTAGTACTAACTAATAAGTGATGTAATTGGTGGCTAGGGCTTGCCATTGGTTGTCTTTCCAATAAATATTTCAATAATCTTTGATTAATTTTCATTGTCTATTGCTTATCTTCTCCGATGGATTGTTACCAAGTTTTGTGCTAAATAAATTGCAAGTCACTCATAAACTTCACATTTATTAGTCAACAGTGCAATTTCTCTTATTGATATAGAAACGTAGTATCTTCAAATGTGTTATGTTACAGTTTGAAGCGATAAATTTTACAATACAGAATTTTTAAATTTTCCATCATTAAGTTATATTTCTTTTTTTTTTTGTCGATTCAAGGTATAACTTTCATTCTTTTATCAAGTTCTTGCAGTTTTCTTCATATTGTTTTTTTTCACTTTGTTTGTAAAGGTATGAACTTGGAAGGCAACCTGCCAACACTAAGATATCCAGTGACAAGTCTGTCAGGAGGATTAGGGTTCGAGGTGGCAATGTGAAGTGGCGTGCATTTAGGCTTGATACTGGAAACTACTCATGGGGTAGTGAGGCGGTGACCCGAAAGACCCGTATTCTTGATGTGGTCTACAATGCATCTAACAATGAGCTTGTTCGTACTCAAACATTGGTGAAGAGTGCCATTGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAAGCTGCACCATCTGCTAAGAAGGAAGAGGTAGAGCAGGATTTCAAAACTAAATGATTTATTGGAGTTATGAAAATTTCGAATACTAGTTTTGTTTGATAATATGGCATTCTTACTGATACCACACGTGATCATTTAGGAAGGTGATGCTGCCACTGAGGAGGTGAAGAAAAGTAACCATGTCCAGCGCAAAATCGAAAAGCGTCAACAGGATCGGAAGCTTGACTCACATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGCATCTCATCAAGACCAGGTCAATGCGGCCGAGCAGATGGGTAAGACTGAAGCTCTTTAGTTATTCTAGATTCTATTGTGTTCTTTCCATATTGTTTGAAACTTTGAGCACGATCATTAAATTTTGCTGAGGTTCTGCAAAATTTTGACAGATATATCTTGGAAGGCAAGGAGCTGGAATTCTATATGAAGAAGCTCCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCATAAGCTTTTGTTATCGATTCGTTTCCGGGCCATGTTTCTGGTTCCCTTTGCTTCTTAGGAAGACGATGAGCTCTGTTGCAGCTTGAGACTAAACAAAGCTAATTTGGAACTTCAGTTTTGCTGGTAATAGTTGTTTAATTATAATACTCTCTTTAGTCTTTTTCATGATAAGAACGGTTTGTTTATTAGGCTCAAGTTTTTGAGTTTCAATCTTTTTCTAGTTTATTTATTTAAGCTGGTTTAATCTAGAATTCATAGAAAGTACAAATGGATCCGAGGGTGGATTTAAATCACATTGATACTTTAAACATGACTTCATTATCAGATTTGAGATCAATCTCATTAATCCATATTAGGAATTGTG

mRNA sequence

GGGAAACAAAGAGAAATCACGTTAAACCTAACCTAACCCTAGCCGCATCAAAACCCCTCTCCATCATCCTCTGCAGAAACCAAATCTCTCCCGATTTCTCTCAATCGCTCAAGGAGCCATAGACTGCTCTTCATTTTAAGAGCTCTCGTTTTCCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAACTTGGAAGGCAACCTGCCAACACTAAGATATCCAGTGACAAGTCTGTCAGGAGGATTAGGGTTCGAGGTGGCAATGTGAAGTGGCGTGCATTTAGGCTTGATACTGGAAACTACTCATGGGGTAGTGAGGCGGTGACCCGAAAGACCCGTATTCTTGATGTGGTCTACAATGCATCTAACAATGAGCTTGTTCGTACTCAAACATTGGTGAAGAGTGCCATTGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAAGCTGCACCATCTGCTAAGAAGGAAGAGGAAGGTGATGCTGCCACTGAGGAGGTGAAGAAAAGTAACCATGTCCAGCGCAAAATCGAAAAGCGTCAACAGGATCGGAAGCTTGACTCACATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGCATCTCATCAAGACCAGGTCAATGCGGCCGAGCAGATGGATATATCTTGGAAGGCAAGGAGCTGGAATTCTATATGAAGAAGCTCCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCATAAGCTTTTGTTATCGATTCGTTTCCGGGCCATGTTTCTGGTTCCCTTTGCTTCTTAGGAAGACGATGAGCTCTGTTGCAGCTTGAGACTAAACAAAGCTAATTTGGAACTTCAGTTTTGCTGGTAATAGTTGTTTAATTATAATACTCTCTTTAGTCTTTTTCATGATAAGAACGGTTTGTTTATTAGGCTCAAGTTTTTGAGTTTCAATCTTTTTCTAGTTTATTTATTTAAGCTGGTTTAATCTAGAATTCATAGAAAGTACAAATGGATCCGAGGGTGGATTTAAATCACATTGATACTTTAAACATGACTTCATTATCAGATTTGAGATCAATCTCATTAATCCATATTAGGAATTGTG

Coding sequence (CDS)

ATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAACTTGGAAGGCAACCTGCCAACACTAAGATATCCAGTGACAAGTCTGTCAGGAGGATTAGGGTTCGAGGTGGCAATGTGAAGTGGCGTGCATTTAGGCTTGATACTGGAAACTACTCATGGGGTAGTGAGGCGGTGACCCGAAAGACCCGTATTCTTGATGTGGTCTACAATGCATCTAACAATGAGCTTGTTCGTACTCAAACATTGGTGAAGAGTGCCATTGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAAGCTGCACCATCTGCTAAGAAGGAAGAGGAAGGTGATGCTGCCACTGAGGAGGTGAAGAAAAGTAACCATGTCCAGCGCAAAATCGAAAAGCGTCAACAGGATCGGAAGCTTGACTCACATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGCATCTCATCAAGACCAGGTCAATGCGGCCGAGCAGATGGATATATCTTGGAAGGCAAGGAGCTGGAATTCTATATGAAGAAGCTCCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCATAA

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA

Homology

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BLAST of Sed0023524 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.5 bits (1064), Expect = 5.8e-112
Identity = 212/219 (96.80%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK   SAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. NCBI nr
Match: XP_008451649.1 (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 414.1 bits (1063), Expect = 7.6e-112
Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK + SAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. NCBI nr
Match: KAG6598870.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414.1 bits (1063), Expect = 7.6e-112
Identity = 212/219 (96.80%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK   SAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTIASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. NCBI nr
Match: XP_038891236.1 (40S ribosomal protein S8 [Benincasa hispida])

HSP 1 Score: 414.1 bits (1063), Expect = 7.6e-112
Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK   SAKK+EEGDAATEEVKKSNHVQRKIEKRQQDRKLD HIEEQF SGRLMAC
Sbjct: 121 DIGRKKKTLASAKKDEEGDAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFGSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. NCBI nr
Match: XP_022937545.1 (40S ribosomal protein S8-like [Cucurbita moschata])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK A S+KKEEE DAATEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTAASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219

[Close]

BLAST of Sed0023524 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 379.4 bits (973), Expect = 2.7e-104
Identity = 196/221 (88.69%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K+VRR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEG---DAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRL 180
           DIGRKKK AP+AKK+ EG   +A TEE KKSNHV RK+EKRQQ R LD+HIEEQF SGRL
Sbjct: 121 DIGRKKK-APAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]

BLAST of Sed0023524 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.6e-102
Identity = 193/221 (87.33%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKE--EEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLM 180
           +IGRKKK A +AKK+  EEG+A TEE KKSNHV  K+EKRQQ R LD+HIEEQF  G+L+
Sbjct: 121 EIGRKKKTA-AAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ACISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of Sed0023524 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 368.2 bits (944), Expect = 6.3e-101
Identity = 191/222 (86.04%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K+VRR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKAAPSAKKE----EEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGR 180
           DIGRKKK  P+AKK+    +E +AA EE KKSNHV RK+EKR++ R LD HIEEQF SGR
Sbjct: 121 DIGRKKK-TPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGR 180

Query: 181 LMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           L+ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]

BLAST of Sed0023524 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.7e-99
Identity = 184/221 (83.26%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKAAPSAKKE-EEGD----AATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSG 180
           ++GRKKK+A S KK+ EEG+    AA EEVKKSNH+ RKI  RQ+ R LDSHIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Sed0023524 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 3.8e-98
Identity = 187/220 (85.00%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDA-ATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMA 180
           DIGRKKK          G+A  TEEVKKSNHVQRK+E RQ+ R LDSH+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           CI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Sed0023524 vs. ExPASy TrEMBL
Match: A0A6J1K537 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.8e-112
Identity = 212/219 (96.80%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK   SAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. ExPASy TrEMBL
Match: A0A6J1EP23 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.8e-112
Identity = 212/219 (96.80%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK   SAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. ExPASy TrEMBL
Match: A0A5D3BT12 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00420 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.7e-112
Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK + SAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. ExPASy TrEMBL
Match: A0A1S3BRZ4 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.7e-112
Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK + SAKKEEEGDA TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0023524 vs. ExPASy TrEMBL
Match: A0A6J1HWY6 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111468617 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.3e-112
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDAATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMAC 180
           DIGRKKK A S+KKEEE DAATEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTATSSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219

[Close]

BLAST of Sed0023524 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 361.3 bits (926), Expect = 5.5e-100
Identity = 184/221 (83.26%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKAAPSAKKE-EEGD----AATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSG 180
           ++GRKKK+A S KK+ EEG+    AA EEVKKSNH+ RKI  RQ+ R LDSHIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Sed0023524 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 359.0 bits (920), Expect = 2.7e-99
Identity = 187/220 (85.00%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKAAPSAKKEEEGDA-ATEEVKKSNHVQRKIEKRQQDRKLDSHIEEQFSSGRLMA 180
           DIGRKKK          G+A  TEEVKKSNHVQRK+E RQ+ R LDSH+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           CI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

The following BLAST results are available for this feature:

BLAST of Sed0023524 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929761.1	5.8e-112	96.80	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal...	[more]
XP_008451649.1	7.6e-112	96.35	PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosoma...	[more]
KAG6598870.1	7.6e-112	96.80	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038891236.1	7.6e-112	96.35	40S ribosomal protein S8 [Benincasa hispida]	[more]
XP_022937545.1	1.3e-111	96.35	40S ribosomal protein S8-like [Cucurbita moschata]	[more]

BLAST of Sed0023524 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49199	2.7e-104	88.69	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
O81361	2.6e-102	87.33	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q08069	6.3e-101	86.04	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
Q93VG5	7.7e-99	83.26	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]
Q9FIF3	3.8e-98	85.00	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]

BLAST of Sed0023524 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K537	2.8e-112	96.80	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1	[more]
A0A6J1EP23	2.8e-112	96.80	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1	[more]
A0A5D3BT12	3.7e-112	96.35	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BRZ4	3.7e-112	96.35	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1	[more]
A0A6J1HWY6	6.3e-112	96.35	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111468617 PE=3 SV=1	[more]

BLAST of Sed0023524 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20290.1	5.5e-100	83.26	Ribosomal protein S8e family protein	[more]
AT5G59240.1	2.7e-99	85.00	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.290.70		coord: 160..212 e-value: 7.8E-21 score: 76.5
None	No IPR available	GENE3D	3.10.290.70		coord: 32..159 e-value: 4.0E-40 score: 138.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..217
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 5..196 e-value: 4.11665E-59 score: 180.793
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..198 e-value: 1.0E-46 score: 156.2
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..217
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..196 e-value: 8.9E-56 score: 187.9
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023524.1	Sed0023524.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome