Sed0023518 (gene) Chayote v1

Overview


Name	Sed0023518
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor TCP12-like
Location	LG07: 35666159 .. 35668869 (-)
RNA-Seq Expression	Sed0023518
Synteny	Sed0023518

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAGTCTCTTATTGGTGATGTGATATTTTAAAGAAGCAGGTATATGTTTATCTTCACCATCATTACAATTCAGATTCCCTCTTAGATATCACACAAGCTCCCAACCGATCATTCATTTTCTTGTAAGATTTACACAAAACTATATCCCACACTTTCTAAACATGCTTTCTTCAAACAACAACCAAATCCATTCATTTGAGAAGCCCATCCAAATCCATGATGAAAATGGAAACCCCATCTCTACATTTGACCAAAACCAACAGCAACTCATAGATTGCTACAACTACAACTACAACTACAACAACAACTTCAACCCTTTTCTTGATGAAGAAGAAGAGTTCATTTTGTTGTATTCTCAAAAACAGCTCTTACTTAGCACCACCCATAACAATTTTGGCCCTCAAATGGAGCTTGAAAGTGGCAATAACATCAATGAGGAGACAACCCAGAAAGCACCATCTCAAAAGAAGGCAATTTCTAGAAAGAGAAGTTCAAATAAGGACAGGCACAGCAAGATCAGCACATTGAGAGGGCCAAGGGATAGAAGAATGAGGCTTTCACTTGAAATTGCAAGAAATTTCTTCAATCTTCAAGACATGCTTGGGTTTGACAAAGCAAGCAAGACAGTGGAGTGGCTTTTTGCCAAATCAAGAAATGCAATTAAGGAGCTCAAGGAGAAGTATTTATCTGGCAATAACCATGTGCTTCAAATCAGCAATAAAAGTTGTGAATTTGAAGAAATGGATCATAAGAAGAAAAAGAGAAGGAAATTTAGGGTGGTGGATAAAGAGTCAAGATACAAGGCAAGGGCTAGGGCTAGAGAGAGAACTAGGGCAAAGCTGAATCTTCGTTTGCAGAAATCAAAATGTGATTTTGAAGGAAACCCAATTGGGGTTTGTAAGATGGAAGACCTTATTGAAGAAAATGGCACCAAAATCAACGATCTTTTTCATGCTCAAAATCAAGAAATTTTGGCCGACAAATGTCAAAACTCAGCTTCTTCTTTGGGCACTGTGTCTTTGGACAACATGAAAGCATCACCTGCAGGTAATTTCCAGATTTAGGGTTTGGTAAAGTTTTTTTTTTTTTTTTTTTTGCCCTTTATTTAGAGTTCAACGACTATATAATATAGGAGATCATACCGTAATAGTTGTTTGATCCTCCAATTCGCAAGTAAAAAATTTTAATCAATTTCTTATAACAGTAATATTTTTTGTAAAAATGTTCTTTTTAGTTATCAAAACTTAGCATAATTCTTGAAAATATAGATAAAAGGTAGATAACAAAACAATGAATTGTGAGGGGGAAGTAATATTTATAAGTCCTAACAAGAGCAGAGCTCTATGGGCATCTTGTATGACTTAAACCATGAGGTTCTAGGTGCAAATCCTCTTCTCCCAATATTATTGTTATGTAAAAAAAAAGTAATATTTATAAGCTACTAAGCAAATTTCAGTTCCTGGCTAGGTTAAAATAAAATTTAAAACAGTGAAAGTCTTCCTTCAAGTTATTCCACGGCGCTGTGTTGCATAATTCAAATTAAACCAATCATACCTAGATGAAAACCTTTTTACCATCCATTCCTTGACCACACCCACTTATCCATTTGAGATTTTTTTTTTTTTTTAAATGACTTGAAAACTTAGAACTTTACTCTTCTAAATCCAAGAGTACCGTTAACCCGTCTTTAAATGGTGGTACTGGGATATATCGTAGGATTAGAAGTCAAATTAAGAGTTCTGGGAAATTAAGTTTCACAGCCGCCTCGAACCTCAGATTTTGGAAGGGATACACCTCCCTCAATTACTGCGCCACTAGGGGACTTATCCAACTAGGATCAAATTCTTATTCTTCTGCCTATGGAACAAAGGCCTAGTAATTCCCTTTCAACTTCTATCCTACCTAGCTAACTCATCAAGCATTATCAGGGAAAGCCAATTCTTTTCCCATTTAGAATCTTTTCATCAGAAAAAAGCTTATGGGAGTATTTGTTGTAATAAGATTATGTTATGAAACAAGATTACTTACGGGTAGGGATCGATCGACCTAATTTCCAATAGTAATATATGTTTTATCTCCTAATTAGAAATCTAAGGAAAAGTTAGACCTTATATTGTTGGTTGTGTGGTTCTTCCACATGGGAAAAAGAGGGGAAGAATCATGGGTATAAATGCGATGACCATGACCTCCATTGGTATAAGGTCTTTTGAGAGATACCCAAAAACAACATCACGAAGGATATGCCCAAAGTTGGACAATGTCATACCAATGTAGAGGATCGCAGTTGGGTAGTGTCGTTCCTAACATATATGGTGGATTGATTCAAAAAATTATCCATAAGGAAGCTACTTTGTCTATGATTTTAGGGTTGAAGCTCAAGGCTAAGTTTTTGTTTTAATTCAACAATATTTAGAGGGAGATTTGAACATGTAAACTTATTATTATTAATTTATACGAGACATCACAATAGAGATATAATCTAGTACTTGGAAAAAAAGCTAATTATATGCTTCAATAAACGAAGTTTTGCATTTGAATGTAGTACAAAGTTGAAATGAAGAAGGATGTACCTCTAATGTGCAGGTTTGAAATTGCTGGAACTTGATGAAATTGATCGTGTGCTGATTTTCTATGGAGAATGAAGCAAGAATTTAAATCCAAGAAACAAGATCCAAGCAATGAGAAGCTTGATGATTTGTAATTTCAGAC

mRNA sequence

TGAAAGTCTCTTATTGGTGATGTGATATTTTAAAGAAGCAGGTATATGTTTATCTTCACCATCATTACAATTCAGATTCCCTCTTAGATATCACACAAGCTCCCAACCGATCATTCATTTTCTTGTAAGATTTACACAAAACTATATCCCACACTTTCTAAACATGCTTTCTTCAAACAACAACCAAATCCATTCATTTGAGAAGCCCATCCAAATCCATGATGAAAATGGAAACCCCATCTCTACATTTGACCAAAACCAACAGCAACTCATAGATTGCTACAACTACAACTACAACTACAACAACAACTTCAACCCTTTTCTTGATGAAGAAGAAGAGTTCATTTTGTTGTATTCTCAAAAACAGCTCTTACTTAGCACCACCCATAACAATTTTGGCCCTCAAATGGAGCTTGAAAGTGGCAATAACATCAATGAGGAGACAACCCAGAAAGCACCATCTCAAAAGAAGGCAATTTCTAGAAAGAGAAGTTCAAATAAGGACAGGCACAGCAAGATCAGCACATTGAGAGGGCCAAGGGATAGAAGAATGAGGCTTTCACTTGAAATTGCAAGAAATTTCTTCAATCTTCAAGACATGCTTGGGTTTGACAAAGCAAGCAAGACAGTGGAGTGGCTTTTTGCCAAATCAAGAAATGCAATTAAGGAGCTCAAGGAGAAGTATTTATCTGGCAATAACCATGTGCTTCAAATCAGCAATAAAAGTTGTGAATTTGAAGAAATGGATCATAAGAAGAAAAAGAGAAGGAAATTTAGGGTGGTGGATAAAGAGTCAAGATACAAGGCAAGGGCTAGGGCTAGAGAGAGAACTAGGGCAAAGCTGAATCTTCGTTTGCAGAAATCAAAATGTGATTTTGAAGGAAACCCAATTGGGGTTTGTAAGATGGAAGACCTTATTGAAGAAAATGGCACCAAAATCAACGATCTTTTTCATGCTCAAAATCAAGAAATTTTGGCCGACAAATGTCAAAACTCAGCTTCTTCTTTGGGCACTGTGTCTTTGGACAACATGAAAGCATCACCTGCAGGTTTGAAATTGCTGGAACTTGATGAAATTGATCGTGTGCTGATTTTCTATGGAGAATGAAGCAAGAATTTAAATCCAAGAAACAAGATCCAAGCAATGAGAAGCTTGATGATTTGTAATTTCAGAC

Coding sequence (CDS)

ATGCTTTCTTCAAACAACAACCAAATCCATTCATTTGAGAAGCCCATCCAAATCCATGATGAAAATGGAAACCCCATCTCTACATTTGACCAAAACCAACAGCAACTCATAGATTGCTACAACTACAACTACAACTACAACAACAACTTCAACCCTTTTCTTGATGAAGAAGAAGAGTTCATTTTGTTGTATTCTCAAAAACAGCTCTTACTTAGCACCACCCATAACAATTTTGGCCCTCAAATGGAGCTTGAAAGTGGCAATAACATCAATGAGGAGACAACCCAGAAAGCACCATCTCAAAAGAAGGCAATTTCTAGAAAGAGAAGTTCAAATAAGGACAGGCACAGCAAGATCAGCACATTGAGAGGGCCAAGGGATAGAAGAATGAGGCTTTCACTTGAAATTGCAAGAAATTTCTTCAATCTTCAAGACATGCTTGGGTTTGACAAAGCAAGCAAGACAGTGGAGTGGCTTTTTGCCAAATCAAGAAATGCAATTAAGGAGCTCAAGGAGAAGTATTTATCTGGCAATAACCATGTGCTTCAAATCAGCAATAAAAGTTGTGAATTTGAAGAAATGGATCATAAGAAGAAAAAGAGAAGGAAATTTAGGGTGGTGGATAAAGAGTCAAGATACAAGGCAAGGGCTAGGGCTAGAGAGAGAACTAGGGCAAAGCTGAATCTTCGTTTGCAGAAATCAAAATGTGATTTTGAAGGAAACCCAATTGGGGTTTGTAAGATGGAAGACCTTATTGAAGAAAATGGCACCAAAATCAACGATCTTTTTCATGCTCAAAATCAAGAAATTTTGGCCGACAAATGTCAAAACTCAGCTTCTTCTTTGGGCACTGTGTCTTTGGACAACATGAAAGCATCACCTGCAGGTTTGAAATTGCTGGAACTTGATGAAATTGATCGTGTGCTGATTTTCTATGGAGAATGA

Protein sequence

MLSSNNNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEFILLYSQKQLLLSTTHNNFGPQMELESGNNINEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQISNKSCEFEEMDHKKKKRRKFRVVDKESRYKARARARERTRAKLNLRLQKSKCDFEGNPIGVCKMEDLIEENGTKINDLFHAQNQEILADKCQNSASSLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE

Homology

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BLAST of Sed0023518 vs. NCBI nr
Match: XP_038893072.1 (transcription factor TCP18-like [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 6.9e-82
Identity = 214/386 (55.44%), Postives = 245/386 (63.47%), Query Frame = 0


Query: 1   MLSSNNNQIHSF---------EKPIQIHDENGNPISTFDQNQQ-----QLIDCYNYNYNY 60
           + SSN NQI SF         EK IQIHD+N NP+S   + Q      QLIDCYNYNYNY
Sbjct: 2   LASSNTNQISSFPFMNESTSIEKSIQIHDQNQNPMSRLFEQQNHPPSLQLIDCYNYNYNY 61

Query: 61  NNNFNPFLDEEEEFIL---LYSQKQLLLSTTHNNFGPQMEL-ESGNNINEE--TTQKAPS 120
             NFNPFLD+ +EFIL   LYSQK  LL    N+F P++ L ES NN N E  TT +  S
Sbjct: 62  --NFNPFLDDHQEFILGHILYSQKHQLLGNNSNSFDPEIGLIESTNNTNNEATTTSQNSS 121

Query: 121 QKKA-----------ISRKRSSN----KDRHSKISTLRGPRDRRMRLSLEIARNFFNLQD 180
           Q KA           ISRKRSS+    KDRHSKI T +GPRDRRMRLSLEIARNFF+LQD
Sbjct: 122 QNKAKTDHTSPKKPIISRKRSSSGMKKKDRHSKICTSKGPRDRRMRLSLEIARNFFDLQD 181

Query: 181 MLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQ-----ISNKSCEFEEMDHKKKK 240
           MLGFDKASKTVEWLF KSRNAIKELKEKYLS  N         ++  S   ++   + KK
Sbjct: 182 MLGFDKASKTVEWLFTKSRNAIKELKEKYLSEANRKSSCDSTLVTKLSVYNDKAVPRGKK 241

Query: 241 RRKFRVVDKESRYKARARARERTRAK-LNLRLQKSKCDFEGNPIGVCKMEDLIEENGTKI 300
           RR+ R+VDKESRYKARARARERTRAK +   L+ SK DFEGNP GVCKM D+IEE  +  
Sbjct: 242 RRRLRIVDKESRYKARARARERTRAKSIRCGLEISKTDFEGNPDGVCKMGDVIEEISSTK 301

Query: 301 NDLFH---AQNQEILADKCQNSAS----------------------------SLGTVSLD 315
             + H    +N++IL  K +NSAS                             + T+SLD
Sbjct: 302 RKMKHVSICENEKILRSKGKNSASLISNQCEDKRVSKEICSDEIHLLPDSSMDMATLSLD 361

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BLAST of Sed0023518 vs. NCBI nr
Match: KAG6573996.1 (Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013055.1 Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 4.3e-76
Identity = 203/341 (59.53%), Postives = 230/341 (67.45%), Query Frame = 0


Query: 1   MLSSNNNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEF 60
           ML+SN N         QIHDE+ +      Q   Q ID Y        NF+PFLD  E+F
Sbjct: 1   MLASNTN---------QIHDEHES-----HQLSLQFIDYY--------NFDPFLD--EDF 60

Query: 61  IL---LYSQKQLLLSTTHNNFGPQMELE-SGNNINEETTQKAPSQKKAISRKRSSNKDRH 120
           IL   LY+QKQ  L    NNF P++  E S NN NEE TQKA  QKK ISRKRSSNKDRH
Sbjct: 61  ILSQILYTQKQQFLDA--NNFEPEIGFEISVNNTNEEITQKALPQKKPISRKRSSNKDRH 120

Query: 121 SKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLS 180
           SKI T +GPRDRRMRLS+EIAR+FF+LQDMLGFDKASKTVEWLFAKSR+AIKELKEKYLS
Sbjct: 121 SKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLS 180

Query: 181 -GNNHVLQISNKSCEFEEMDHK--------KKKRRKFRVVDKESRYKARARARERTRAKL 240
            GNN+     NKS +F  +  K        +KKRRK RVVDKESR KARARARERTRAK+
Sbjct: 181 EGNNY-----NKSFDFSPLFRKVSVFEAPREKKRRKLRVVDKESRSKARARARERTRAKI 240

Query: 241 NLRLQKSKCDFEGNPIGVCKMEDLIEENGTKINDLFH---AQNQEILADKCQNSAS---- 300
             RL+ SKCDFEGNPIG C M D+ EE GTK N  F     +N+  L+   QNSA     
Sbjct: 241 VRRLEISKCDFEGNPIGDCMMGDVSEEIGTK-NKNFEFEPGENERFLSSNVQNSADHHVH 300

Query: 301 -------SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                   + ++SLD+ KASPAGLKLLELDEID VLIFYGE
Sbjct: 301 LLPGSSMDMSSMSLDSTKASPAGLKLLELDEIDGVLIFYGE 309

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BLAST of Sed0023518 vs. NCBI nr
Match: XP_022945400.1 (transcription factor TCP12-like [Cucurbita moschata])

HSP 1 Score: 293.9 bits (751), Expect = 1.7e-75
Identity = 199/339 (58.70%), Postives = 229/339 (67.55%), Query Frame = 0


Query: 1   MLSSNNNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEF 60
           ML+SN N         QIHDE+ +      Q   Q ID Y        NF+PFLD  E+F
Sbjct: 1   MLASNTN---------QIHDEHES-----HQLSLQFIDYY--------NFDPFLD--EDF 60

Query: 61  IL---LYSQKQLLLSTTHNNFGPQMELE-SGNNINEETTQKAPSQKKAISRKRSSNKDRH 120
           IL   LY+QKQ  L    NNF P++  E S NN NEE TQKA  QKK ISRKRSSNKDRH
Sbjct: 61  ILSQILYTQKQQFLDA--NNFEPEIGFEISVNNTNEEITQKALPQKKPISRKRSSNKDRH 120

Query: 121 SKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLS 180
           SKI T +GPRDRRMRLS+EIAR+FF+LQDMLGFDKASKTVEWLFAKSR+AIKELKEKYLS
Sbjct: 121 SKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLS 180

Query: 181 -GNNHVLQISNKSCEFEEMDHK--------KKKRRKFRVVDKESRYKARARARERTRAKL 240
            GNN+     NKS +F  +  K        +KKRRK RVVDKESR KARARARERTRAK+
Sbjct: 181 EGNNY-----NKSFDFSPLFRKVSVFEAPREKKRRKLRVVDKESRSKARARARERTRAKI 240

Query: 241 NLRLQKSKCDFEGNPIGVCKMEDLIEENGTKIN--DLFHAQNQEILADKCQNSAS----- 300
             RL+ SKCDFEGNPIG C M D+ EE GTK    +    +N+  L+   +NSA      
Sbjct: 241 VRRLEISKCDFEGNPIGDCMMGDVSEEIGTKNKNFEFERGENERFLSSNVKNSADHVHLL 300

Query: 301 -----SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                 + ++SLD+ KASPAGLK+LELDEID VLIFYGE
Sbjct: 301 PGSSMDMSSMSLDSTKASPAGLKVLELDEIDGVLIFYGE 308

[Close]

BLAST of Sed0023518 vs. NCBI nr
Match: XP_023542921.1 (transcription factor TCP12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.5 bits (750), Expect = 2.2e-75
Identity = 199/340 (58.53%), Postives = 231/340 (67.94%), Query Frame = 0


Query: 1   MLSSNNNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEF 60
           ML+SN N         QIHDE+ +      Q   Q ID Y        NF+PFLD  E+F
Sbjct: 1   MLASNTN---------QIHDEHES-----HQLSLQFIDYY--------NFDPFLD--EDF 60

Query: 61  IL---LYSQKQLLLSTTHNNFGPQMELE-SGNNINEETTQKAPSQKKAISRKRSSNKDRH 120
           IL   LY+QKQ  L    NNF P++  E S NN NEE TQKA  QKK ISRKRSSNKDRH
Sbjct: 61  ILSQILYTQKQQFLDA--NNFEPEIGFEISVNNTNEEITQKALPQKKPISRKRSSNKDRH 120

Query: 121 SKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLS 180
           SKI T +GPRDRRMRLS+EIAR+FF+LQDMLGFDKASKTVEWLFAKSR+AIKELKEK+LS
Sbjct: 121 SKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKFLS 180

Query: 181 -GNNHVLQISNKSCEFEEMDHK--------KKKRRKFRVVDKESRYKARARARERTRAKL 240
            G+N+     NKS +F  +  K        +KKRRK RVVDKESR +ARARARERTRAK+
Sbjct: 181 EGHNY-----NKSFDFSPLFRKVSVFEAPREKKRRKLRVVDKESRSRARARARERTRAKI 240

Query: 241 NLRLQKSKCDFEGNPIGVCKMEDLIEENGT--KINDLFHAQNQEILADKCQNSAS----- 300
             RL+ SKCDFEGNPIG C M D+ EE GT  KI +   +QN+  L+   +NSA      
Sbjct: 241 VRRLEISKCDFEGNPIGDCMMGDVSEEIGTKNKIFEFERSQNERFLSSNVENSADDHVHL 300

Query: 301 ------SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                  + ++SLD+ KASPAGLKLLELDEID VLIFYGE
Sbjct: 301 LPCSSMDMSSMSLDSTKASPAGLKLLELDEIDGVLIFYGE 309

[Close]

BLAST of Sed0023518 vs. NCBI nr
Match: XP_022968428.1 (transcription factor TCP12-like [Cucurbita maxima])

HSP 1 Score: 292.7 bits (748), Expect = 3.7e-75
Identity = 197/338 (58.28%), Postives = 230/338 (68.05%), Query Frame = 0


Query: 1   MLSSNNNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEF 60
           ML+SN N         QIHDE+ +      Q   Q ID Y        NF+PFLD  E+F
Sbjct: 1   MLASNTN---------QIHDEHES-----HQLSLQFIDYY--------NFDPFLD--EDF 60

Query: 61  IL---LYSQKQLLLSTTHNNFGPQMELE-SGNNINEETTQKAPSQKKAISRKRSSNKDRH 120
           IL   LY+QKQ  L    NNF P++  E S NN NEE TQKA  QKK ISRKRSSNKDRH
Sbjct: 61  ILSQILYTQKQQFLDA--NNFEPEIGFEISVNNTNEEITQKALPQKKPISRKRSSNKDRH 120

Query: 121 SKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLS 180
           SKI T +GPRDRRMRLS+EIAR+FF+LQDMLGFDKASKTVEWLFAKSR+AIKELKEKYLS
Sbjct: 121 SKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLS 180

Query: 181 GNNHVLQISNKSCEFEEMDHK--------KKKRRKFRVVDKESRYKARARARERTRAKLN 240
            +++     NKS +F  +  K        +KKRRK RVVDKESR KARARARERTRAK+ 
Sbjct: 181 ESHNY----NKSFDFSPLFRKVSVFEAPREKKRRKLRVVDKESRSKARARARERTRAKIV 240

Query: 241 LRLQKSKCDFEGNPIGVCKMEDLIEENGT--KINDLFHAQNQEILADKCQNSAS------ 300
            RL+ SKCDFEGNPIG C M D+ EE GT  KI +   ++N+  L+   +NSA       
Sbjct: 241 HRLEISKCDFEGNPIGDCMMGDVSEEIGTKNKIFEFKQSENERFLSSNVENSADHVHLLP 300

Query: 301 ----SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                + ++SLD++KASPAGLKLLELDEID  LIFYGE
Sbjct: 301 GSSMDMSSMSLDSIKASPAGLKLLELDEIDGGLIFYGE 308

[Close]

BLAST of Sed0023518 vs. ExPASy Swiss-Prot
Match: A0AQW4 (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.9e-24
Identity = 84/210 (40.00%), Postives = 127/210 (60.48%), Query Frame = 0


Query: 41  NYNYNYNNNFNPFLDE-----EEEFIL---LYSQKQLLLSTTHN--NFGPQMELESGNNI 100
           N +++Y++   PF  +     +E F++   L  Q+ +  +   +   F  ++EL+  N  
Sbjct: 35  NSHHHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKN-- 94

Query: 101 NEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFD 160
             E      + ++   R+    +DRHSKI T +GPRDRRMRLSL+IAR FF+LQDMLGFD
Sbjct: 95  --EKCVDGSTSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFD 154

Query: 161 KASKTVEWLFAKSRNAIKELKEKYLS----GNNHVLQISNKSCEFEEMDHKKKKRRKFRV 220
           KASKT+EWLF+KS+ +IK+LKE+  +    G +  LQ+  K  E +E    +  +R+ + 
Sbjct: 155 KASKTIEWLFSKSKTSIKQLKERVAASEGGGKDEHLQVDEK--EKDETLKLRVSKRRTKT 214

Query: 221 VD-----KESRYKARARARERTRAKLNLRL 232
           ++     KESR +AR RARERT AK+ +RL
Sbjct: 215 MESSFKTKESRERARKRARERTMAKMKMRL 238

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BLAST of Sed0023518 vs. ExPASy Swiss-Prot
Match: Q9SNW8 (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.0e-20
Identity = 81/205 (39.51%), Postives = 111/205 (54.15%), Query Frame = 0


Query: 105 ISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSR 164
           +++K +  KDRHSKI+  +GPRDRR+RLS+ IAR FF+LQ+MLGFDK SKT++WL  KS+
Sbjct: 80  LAKKHTPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSK 139

Query: 165 NAIKELKEKYLSGNNHVLQISNKSCEFEEM-------------------DHKKKKRRKFR 224
            AIKEL +   S +N  +  S   C+ E +                    +K K  R   
Sbjct: 140 EAIKELVQSKSSKSN--ISNSPSECDQEVLSADLPYIGSSKGKAAVGLNSNKCKGGRDAV 199

Query: 225 VVDKESRYKARARARERTRAKLNLRL--QKSKCDFEGNP--IGVCKMEDLIEENGTKIND 284
            + KESR KARARARERT+ K+ ++   Q+    +E NP  +   K     E +G   N 
Sbjct: 200 DLAKESRAKARARARERTKEKMCIKQLNQERNKSYEWNPSVLFQSKSSQQFEVSGPSTN- 259

[Close]

BLAST of Sed0023518 vs. ExPASy Swiss-Prot
Match: Q9SBV9 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.9e-19
Identity = 73/176 (41.48%), Postives = 100/176 (56.82%), Query Frame = 0


Query: 71  LSTTHNNFGPQMELESGNNINEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRM 130
           L   +NNF   +     N +N + +   P+       K++  KDRHSKI T +GPRDRR+
Sbjct: 49  LFNNNNNFNHDVV----NGLNRDPSPTFPT-------KQAVKKDRHSKIYTSQGPRDRRV 108

Query: 131 RLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQISN---- 190
           RLS+ IAR FF+LQ+MLGFDK SKT++WL  KS+ A+KEL +   + +N      +    
Sbjct: 109 RLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELVQSKSTKSNSSSPCDDCEEV 168

Query: 191 KSCEFEEM-DHKKKKRRK-----------FRVVDKESRYKARARARERTRAKLNLR 231
            S E E + DH K K  K            +   KESR KARARARERT+ K+ ++
Sbjct: 169 VSVESENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARARERTKEKMCIK 213

[Close]

BLAST of Sed0023518 vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.1e-19
Identity = 75/181 (41.44%), Postives = 102/181 (56.35%), Query Frame = 0


Query: 71  LSTTHNNFGPQMELESGNNINEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRM 130
           L   +NNF   +     N +N + +   P+       K++  KDRHSKI T +GPRDRR+
Sbjct: 49  LFNNNNNFNHDVV----NGLNRDPSPTFPT-------KQAVKKDRHSKIYTSQGPRDRRV 108

Query: 131 RLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQISNKSC- 190
           RLS+ IAR FF+LQ+MLGFDK SKT++WL  KS+ AIKEL +   + +N     S+  C 
Sbjct: 109 RLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSN-----SSSPCD 168

Query: 191 EFEEM---------DHKKKKRRK-----------FRVVDKESRYKARARARERTRAKLNL 231
           + EE+         DH K K  K            +   KESR KARARARERT+ K+ +
Sbjct: 169 DCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARARERTKEKMCI 213

[Close]

BLAST of Sed0023518 vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.6e-18
Identity = 86/246 (34.96%), Postives = 122/246 (49.59%), Query Frame = 0


Query: 6   NNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEFILLYS 65
           N  +H  +    +H      +   + N+ QL D  + +Y    N  P L+    F     
Sbjct: 5   NTYLHLPQVSSSLHSRAATSVVDLNGNEIQLHDMLSGHYLTTAN-APVLESTALF----- 64

Query: 66  QKQLLLSTTHNNFGPQMELESGNNINEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGP 125
                    +NNF   +     N +N + +   P+       K++  KDRHSKI T +GP
Sbjct: 65  -------NNNNNFNHDVV----NGLNRDPSPTFPT-------KQAVKKDRHSKIYTSQGP 124

Query: 126 RDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQIS 185
           RDRR+RLS+ IAR FF+LQ+MLGFDK SKT++WL  KS+ AIKEL +   + +N     S
Sbjct: 125 RDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSN-----S 184

Query: 186 NKSC-EFEEM---------DHKKKKRRK-----------FRVVDKESRYKARARARERTR 231
           +  C + EE+         DH K K  K            +   KESR KARARARERT+
Sbjct: 185 SSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARARERTK 221

[Close]

BLAST of Sed0023518 vs. ExPASy TrEMBL
Match: A0A6J1G0U4 (transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111449645 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 8.0e-76
Identity = 199/339 (58.70%), Postives = 229/339 (67.55%), Query Frame = 0


Query: 1   MLSSNNNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEF 60
           ML+SN N         QIHDE+ +      Q   Q ID Y        NF+PFLD  E+F
Sbjct: 1   MLASNTN---------QIHDEHES-----HQLSLQFIDYY--------NFDPFLD--EDF 60

Query: 61  IL---LYSQKQLLLSTTHNNFGPQMELE-SGNNINEETTQKAPSQKKAISRKRSSNKDRH 120
           IL   LY+QKQ  L    NNF P++  E S NN NEE TQKA  QKK ISRKRSSNKDRH
Sbjct: 61  ILSQILYTQKQQFLDA--NNFEPEIGFEISVNNTNEEITQKALPQKKPISRKRSSNKDRH 120

Query: 121 SKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLS 180
           SKI T +GPRDRRMRLS+EIAR+FF+LQDMLGFDKASKTVEWLFAKSR+AIKELKEKYLS
Sbjct: 121 SKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLS 180

Query: 181 -GNNHVLQISNKSCEFEEMDHK--------KKKRRKFRVVDKESRYKARARARERTRAKL 240
            GNN+     NKS +F  +  K        +KKRRK RVVDKESR KARARARERTRAK+
Sbjct: 181 EGNNY-----NKSFDFSPLFRKVSVFEAPREKKRRKLRVVDKESRSKARARARERTRAKI 240

Query: 241 NLRLQKSKCDFEGNPIGVCKMEDLIEENGTKIN--DLFHAQNQEILADKCQNSAS----- 300
             RL+ SKCDFEGNPIG C M D+ EE GTK    +    +N+  L+   +NSA      
Sbjct: 241 VRRLEISKCDFEGNPIGDCMMGDVSEEIGTKNKNFEFERGENERFLSSNVKNSADHVHLL 300

Query: 301 -----SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                 + ++SLD+ KASPAGLK+LELDEID VLIFYGE
Sbjct: 301 PGSSMDMSSMSLDSTKASPAGLKVLELDEIDGVLIFYGE 308

[Close]

BLAST of Sed0023518 vs. ExPASy TrEMBL
Match: A0A6J1HXZ8 (transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111467675 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 197/338 (58.28%), Postives = 230/338 (68.05%), Query Frame = 0


Query: 1   MLSSNNNQIHSFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEF 60
           ML+SN N         QIHDE+ +      Q   Q ID Y        NF+PFLD  E+F
Sbjct: 1   MLASNTN---------QIHDEHES-----HQLSLQFIDYY--------NFDPFLD--EDF 60

Query: 61  IL---LYSQKQLLLSTTHNNFGPQMELE-SGNNINEETTQKAPSQKKAISRKRSSNKDRH 120
           IL   LY+QKQ  L    NNF P++  E S NN NEE TQKA  QKK ISRKRSSNKDRH
Sbjct: 61  ILSQILYTQKQQFLDA--NNFEPEIGFEISVNNTNEEITQKALPQKKPISRKRSSNKDRH 120

Query: 121 SKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLS 180
           SKI T +GPRDRRMRLS+EIAR+FF+LQDMLGFDKASKTVEWLFAKSR+AIKELKEKYLS
Sbjct: 121 SKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLS 180

Query: 181 GNNHVLQISNKSCEFEEMDHK--------KKKRRKFRVVDKESRYKARARARERTRAKLN 240
            +++     NKS +F  +  K        +KKRRK RVVDKESR KARARARERTRAK+ 
Sbjct: 181 ESHNY----NKSFDFSPLFRKVSVFEAPREKKRRKLRVVDKESRSKARARARERTRAKIV 240

Query: 241 LRLQKSKCDFEGNPIGVCKMEDLIEENGT--KINDLFHAQNQEILADKCQNSAS------ 300
            RL+ SKCDFEGNPIG C M D+ EE GT  KI +   ++N+  L+   +NSA       
Sbjct: 241 HRLEISKCDFEGNPIGDCMMGDVSEEIGTKNKIFEFKQSENERFLSSNVENSADHVHLLP 300

Query: 301 ----SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                + ++SLD++KASPAGLKLLELDEID  LIFYGE
Sbjct: 301 GSSMDMSSMSLDSIKASPAGLKLLELDEIDGGLIFYGE 308

[Close]

BLAST of Sed0023518 vs. ExPASy TrEMBL
Match: A0A0A0KT45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608320 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 201/396 (50.76%), Postives = 232/396 (58.59%), Query Frame = 0


Query: 1   MLSSNNNQIHSF-----------EKPIQIHDEN----GNPISTFDQNQ-----QQLIDCY 60
           + SSN NQI SF           +  IQIHDEN     NP+S   + Q      QLIDC 
Sbjct: 2   LASSNPNQISSFPFMNQSTTSIEKSIIQIHDENHDDGQNPMSRLFEQQIHPPSLQLIDCS 61

Query: 61  NYNYNYNNNFNPFLDEEEEFIL---LYSQKQLLLSTTHNNFGPQMELESGNNINEE---- 120
           NYNYN NN FNPFLD+ +EFIL   LYSQK  LL+   +  G    +ES NN N      
Sbjct: 62  NYNYN-NNYFNPFLDDHQEFILGHILYSQKHQLLANNSDQIG---VIESSNNTNNNEAAA 121

Query: 121 --TTQKAPSQKKA----------ISRKRSSN----KDRHSKISTLRGPRDRRMRLSLEIA 180
             TT    SQ KA          ISRKRSS+    KDRHSKI T +GPRDRRMRLSLEIA
Sbjct: 122 TTTTHNYSSQNKAKTDHSSQKIPISRKRSSSVMKKKDRHSKICTSKGPRDRRMRLSLEIA 181

Query: 181 RNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQISNKSCEF------ 240
           RNFF+LQDMLGFDKASKTVEWLF KSR+AIKE+KEKYLS        S  SC        
Sbjct: 182 RNFFDLQDMLGFDKASKTVEWLFTKSRSAIKEVKEKYLSEAK-----SKSSCYSSTDLVT 241

Query: 241 ----EEMDHKKKKRRKFRVVDKESRYKARARARERTRAK-LNLRLQKSKCDFEGNPIGVC 300
               E +   KK+RR+ R+VDKESRYKARARARERTRAK +   L+ SK + EGNP GV 
Sbjct: 242 NLYKEVLPSGKKRRRRLRIVDKESRYKARARARERTRAKSIQRGLEVSKSNLEGNPDGVR 301

Query: 301 KMEDLIEE-NGTKINDLFH---AQNQEILADKCQNSAS---------------------- 315
           KM D  EE +G K     H    +N+++L  + +NS S                      
Sbjct: 302 KMGDFSEEISGNKRKTSTHVSLCENEKVLGSEEKNSDSLIMDKRVSKEICSDEIHLLPDS 361

[Close]

BLAST of Sed0023518 vs. ExPASy TrEMBL
Match: A0A6J1GZV4 (transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC111458752 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 7.0e-64
Identity = 175/344 (50.87%), Postives = 211/344 (61.34%), Query Frame = 0


Query: 11  SFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEFI--LLYSQKQ 70
           S +  IQIHDE            QQ IDCY        NFNPFLD+ +     +LY    
Sbjct: 5   SIDNSIQIHDE----------RFQQTIDCY--------NFNPFLDDHDFIFGHILY---- 64

Query: 71  LLLSTTHNNFGPQMELESGNNINEETT--QKAPSQKKAISRKRSSN-KDRHSKISTLRGP 130
                      P++ L S NN + +TT   KA SQ   ISRKRSS  KDRHSKI T +GP
Sbjct: 65  -----------PEIGLGSANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKICTSKGP 124

Query: 131 RDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYL--SGNNHVLQ 190
           RDRRMRLSLEIAR FF+LQDMLGFDKASKTVEWLF KSR+AIKEL+EK+L  + ++    
Sbjct: 125 RDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEANSSESTL 184

Query: 191 ISNKSCEFEEMDH-----KKKKRRKFRVVDKESRYKARARARERTRAKL-NLRLQKSKCD 250
           ++N S  + + DH     + KKRRK R+VDKESR+KARARAR RT+AKL   R + SK +
Sbjct: 185 VTNVSL-YHDHDHDQEVPRGKKRRKLRIVDKESRFKARARARARTKAKLIRARFEISKSN 244

Query: 251 FEGNPIGVCKMEDLIEENGTKINDLFHAQNQEILADKCQNSAS----------------- 310
           FEGNP+GVCKMED+IEE+ TK   +  A   + L  K +NSAS                 
Sbjct: 245 FEGNPVGVCKMEDVIEESSTKSKSV--ANFPQNLGSKAKNSASLISNHCYDKRVSKESCS 304

Query: 311 ----------SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                      +GT+SLD M+ASPAGLKL ELDE+D VLIFYGE
Sbjct: 305 EIHLLPCSSMDMGTLSLDTMRASPAGLKLSELDEVDGVLIFYGE 312

[Close]

BLAST of Sed0023518 vs. ExPASy TrEMBL
Match: A0A6J1J441 (transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111482452 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63
Identity = 178/345 (51.59%), Postives = 209/345 (60.58%), Query Frame = 0


Query: 11  SFEKPIQIHDENGNPISTFDQNQQQLIDCYNYNYNYNNNFNPFLDEEEEFI--LLYSQKQ 70
           S +  IQIHDE            QQ IDCY        NFNPFLD+++     +LY    
Sbjct: 5   SIDNSIQIHDE----------RFQQTIDCY--------NFNPFLDDQDFIFGHILY---- 64

Query: 71  LLLSTTHNNFGPQMELESGNNINEETT--QKAPSQKKAISRKRSSN-KDRHSKISTLRGP 130
                      P++ L S NN N +TT   KA SQ   ISRKRSS  KDRHSKI T +GP
Sbjct: 65  -----------PEIGLGSANNTNNDTTTAHKASSQDNPISRKRSSGAKDRHSKICTSKGP 124

Query: 131 RDRRMRLSLEIARNFFNLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYL-----SGNNH 190
           RDRRMRLSLEIAR FF+LQDMLGFDKASKTVEWLF KSR+AIKELKEK+L     SG+  
Sbjct: 125 RDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELKEKFLLKVHSSGST- 184

Query: 191 VLQISNKSCEFEEMDHKKKKRRKFRVVDKESRYKARARARERTRAKL-NLRLQKSKCDFE 250
              + N S   ++   + KKRRK R+VDKESR+KARARARERTRAKL   R + SK +FE
Sbjct: 185 --LVRNVSLYRDQEVPRGKKRRKLRIVDKESRFKARARARERTRAKLIRGRFEISKSNFE 244

Query: 251 GNPIGVCKMEDLIEENGTKINDLFHAQNQEILADKCQNSAS------------------- 310
            NP+GVCKMED+IEE+ TK   +  A   + L  K +NSAS                   
Sbjct: 245 VNPVGVCKMEDVIEESSTKSKSV--ANFPQNLGSKAKNSASLISNHCYDKRVSKESCSGE 304

Query: 311 -----------SLGTVSLDNMKASPAGLKLLELDEIDRVLIFYGE 315
                       +GT+SLD M+ASPAGLKL ELDE+D VLIFYGE
Sbjct: 305 IHLLPGSGSSMDMGTLSLDTMRASPAGLKLSELDEVDGVLIFYGE 311

[Close]

BLAST of Sed0023518 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-25
Identity = 84/210 (40.00%), Postives = 127/210 (60.48%), Query Frame = 0


Query: 41  NYNYNYNNNFNPFLDE-----EEEFIL---LYSQKQLLLSTTHN--NFGPQMELESGNNI 100
           N +++Y++   PF  +     +E F++   L  Q+ +  +   +   F  ++EL+  N  
Sbjct: 35  NSHHHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKN-- 94

Query: 101 NEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFD 160
             E      + ++   R+    +DRHSKI T +GPRDRRMRLSL+IAR FF+LQDMLGFD
Sbjct: 95  --EKCVDGSTSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFD 154

Query: 161 KASKTVEWLFAKSRNAIKELKEKYLS----GNNHVLQISNKSCEFEEMDHKKKKRRKFRV 220
           KASKT+EWLF+KS+ +IK+LKE+  +    G +  LQ+  K  E +E    +  +R+ + 
Sbjct: 155 KASKTIEWLFSKSKTSIKQLKERVAASEGGGKDEHLQVDEK--EKDETLKLRVSKRRTKT 214

Query: 221 VD-----KESRYKARARARERTRAKLNLRL 232
           ++     KESR +AR RARERT AK+ +RL
Sbjct: 215 MESSFKTKESRERARKRARERTMAKMKMRL 238

[Close]

BLAST of Sed0023518 vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 85.9 bits (211), Expect = 6.4e-17
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 82  MELESGNNINEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFF 141
           M  +S N +N++  +  P   K I  K+   KDRHSKI T +G RDRR+RLS+ IAR FF
Sbjct: 60  MAFKSNNVVNQQGFE-FPEVSKEI--KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFF 119

Query: 142 NLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQISNKSCEFEEMDHKKK 200
           +LQDMLGFDKASKT++WL  KSR AIKE+ +   + NN      N   + E+ + K++
Sbjct: 120 DLQDMLGFDKASKTLDWLLKKSRKAIKEVVQA-KNLNNDDEDFGNIGGDVEQEEEKEE 173

[Close]

BLAST of Sed0023518 vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 85.9 bits (211), Expect = 6.4e-17
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 82  MELESGNNINEETTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFF 141
           M  +S N +N++  +  P   K I  K+   KDRHSKI T +G RDRR+RLS+ IAR FF
Sbjct: 60  MAFKSNNVVNQQGFE-FPEVSKEI--KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFF 119

Query: 142 NLQDMLGFDKASKTVEWLFAKSRNAIKELKEKYLSGNNHVLQISNKSCEFEEMDHKKK 200
           +LQDMLGFDKASKT++WL  KSR AIKE+ +   + NN      N   + E+ + K++
Sbjct: 120 DLQDMLGFDKASKTLDWLLKKSRKAIKEVVQA-KNLNNDDEDFGNIGGDVEQEEEKEE 173

[Close]

BLAST of Sed0023518 vs. TAIR 10
Match: AT3G18550.2 (TCP family transcription factor )

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-15
Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 94  TTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKAS 153
           +T + P  KKA   K+ S  DRHSKI T +G RDRRMRLSL++A+  F LQDMLGFDKAS
Sbjct: 133 STSQDPKMKKA---KKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKAS 192

Query: 154 KTVEWLFAKSRNAIKELKEK------YLSGN-NHV--LQISNKSCEFEEM---DHK---- 213
           KTVEWL  +++  I ++         + SG+ +H+  +  S+  CE   M   D +    
Sbjct: 193 KTVEWLLTQAKPEIIKIATTLSHHGCFSSGDESHIRSMDTSSDLCELASMWTVDDRGSNT 252

Query: 214 -----------------KKKRRKFRV-----VDKESRYKARARARERTRAKLNLRLQ 233
                            K+KR + R      + KE R KAR RA+ RT  K+ ++++
Sbjct: 253 NTTETRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMK 306

[Close]

BLAST of Sed0023518 vs. TAIR 10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-14
Identity = 67/181 (37.02%), Postives = 95/181 (52.49%), Query Frame = 0


Query: 94  TTQKAPSQKKAISRKRSSNKDRHSKISTLRGPRDRRMRLSLEIARNFFNLQDMLGFDKAS 153
           +T + P  KKA   K+ S  DRHSKI T +G RDRRMRLSL++A+  F LQDMLGFDKAS
Sbjct: 133 STSQDPKMKKA---KKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKAS 192

Query: 154 KTVEWLFAKSRNAIKELKEK------YLSGN-NHV------LQISNKSCEFEEM---DHK 213
           KTVEWL  +++  I ++         + SG+ +H+      +  S+  CE   M   D +
Sbjct: 193 KTVEWLLTQAKPEIIKIATTLSHHGCFSSGDESHIRPVLGSMDTSSDLCELASMWTVDDR 252

Query: 214 ---------------------KKKRRKFRV-----VDKESRYKARARARERTRAKLNLRL 233
                                K+KR + R      + KE R KAR RA+ RT  K+ +++
Sbjct: 253 GSNTNTTETRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKM 310

The following BLAST results are available for this feature:

BLAST of Sed0023518 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893072.1	6.9e-82	55.44	transcription factor TCP18-like [Benincasa hispida]	[more]
KAG6573996.1	4.3e-76	59.53	Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022945400.1	1.7e-75	58.70	transcription factor TCP12-like [Cucurbita moschata]	[more]
XP_023542921.1	2.2e-75	58.53	transcription factor TCP12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968428.1	3.7e-75	58.28	transcription factor TCP12-like [Cucurbita maxima]	[more]

BLAST of Sed0023518 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0AQW4	8.9e-24	40.00	Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1	[more]
Q9SNW8	6.0e-20	39.51	Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1	[more]
Q9SBV9	3.9e-19	41.48	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 G...	[more]
Q9SBV6	5.1e-19	41.44	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=...	[more]
O49250	5.6e-18	34.96	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]

BLAST of Sed0023518 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0U4	8.0e-76	58.70	transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111449645 PE...	[more]
A0A6J1HXZ8	1.8e-75	58.28	transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111467675 PE=4...	[more]
A0A0A0KT45	1.4e-67	50.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608320 PE=4 SV=1	[more]
A0A6J1GZV4	7.0e-64	50.87	transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC11145875...	[more]
A0A6J1J441	1.6e-63	51.59	transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111482452 ...	[more]

BLAST of Sed0023518 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68800.1	6.3e-25	40.00	TCP domain protein 12	[more]
AT1G67260.1	6.4e-17	47.46	TCP family transcription factor	[more]
AT1G67260.2	6.4e-17	47.46	TCP family transcription factor	[more]
AT3G18550.2	3.5e-15	37.85	TCP family transcription factor	[more]
AT3G18550.1	1.0e-14	37.02	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 111..176 e-value: 1.1E-33 score: 117.0
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 112..170 score: 32.661282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..101
None	No IPR available	PANTHER	PTHR31072:SF156	TRANSCRIPTION FACTOR TCP18	coord: 42..237
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 42..237
IPR017888	CYC/TB1, R domain	PROSITE	PS51370	R	coord: 209..226 score: 11.075041

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023518.1	Sed0023518.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity