Sed0023507 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTGGTTCCTTTTGCCTTGAAGTTCCAAAATTGCCCTTTCACAATGCCTTTATATTCATTTCATTCTTTCCTCTTCCACATCTCTCAGCTCATACAAGGCAACATCAATGTCTTCCAAACTTTTGACCACCATCTTCACATTTCTCTTCCTTTTCTTCTTCTTATCCTCCTTGACAATCGCTGCTGTTGCTCGACCTGTGCCCGATTCTTCAAACACTTCTCCGAGAACGGCTCGAGATGGAGTATGTAAATTTTTCAGAATTTTTCTCTAGTTAATATATGTTTTTATAAAGAAAAAAAAAGTAGCAATTAAGTACTGTGTTTTTTTTTATGTTGTGAAGTTTAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCCGCTCATGCTGATTATATCTACACAGATAAACAGAAGCCTTGATATTATATGCTTCGATTAACTTATGTGCATCTCGACTATTTTTACGGAACAAACCGTTTGAATCCGACACGAACTGGCTGCCATCTTATTCTCATTAAGTATACACACAACAAGTTTCTCTCTATATATGTGAAGCCCTTTTTCATCACTTTTCTCCCCTAACATAGATTCATTCATCAAGAATTTGGGAGAAAATGAAAAAGTGATTCTTCAAGTTTCTTCGATTCGGGAAAGTCGATGTTATTCGAGTTGTAGATTCAACTTTCTGATCTCTTGGTTGAGAATATATGACTTAACTAATTGGGCTACACTCAGATTGGCTAAAAATTAATCATAATAGTTGAAGATATATGCTAGATTTTTGTACCTTTTAGAATCATAATATA ATGATGTTGGTTCCTTTTGCCTTGAAGTTCCAAAATTGCCCTTTCACAATCTCATACAAGGCAACATCAATGTCTTCCAAACTTTTGACCACCATCTTCACATTTCTCTTCCTTTTCTTCTTCTTATCCTCCTTGACAATCGCTGCTGTTGCTCGACCTGTGCCCGATTCTTCAAACACTTCTCCGAGAACGGCTCGAGATGGATTTAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCCGCTCATGCTGATTATATCTACACAGATAAACAGAAGCCTTGATATTATATGCTTCGATTAACTTATGTGCATCTCGACTATTTTTACGGAACAAACCGTTTGAATCCGACACGAACTGGCTGCCATCTTATTCTCATTAAGTATACACACAACAAGTTTCTCTCTATATATGTGAAGCCCTTTTTCATCACTTTTCTCCCCTAACATAGATTCATTCATCAAGAATTTGGGAGAAAATGAAAAAGTGATTCTTCAAGTTTCTTCGATTCGGGAAAGTCGATGTTATTCGAGTTGTAGATTCAACTTTCTGATCTCTTGGTTGAGAATATATGACTTAACTAATTGGGCTACACTCAGATTGGCTAAAAATTAATCATAATAGTTGAAGATATATGCTAGATTTTTGTACCTTTTAGAATCATAATATA ATGATGTTGGTTCCTTTTGCCTTGAAGTTCCAAAATTGCCCTTTCACAATCTCATACAAGGCAACATCAATGTCTTCCAAACTTTTGACCACCATCTTCACATTTCTCTTCCTTTTCTTCTTCTTATCCTCCTTGACAATCGCTGCTGTTGCTCGACCTGTGCCCGATTCTTCAAACACTTCTCCGAGAACGGCTCGAGATGGATTTAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCCGCTCATGCTGATTATATCTACACAGATAAACAGAAGCCTTGA MMLVPFALKFQNCPFTISYKATSMSSKLLTTIFTFLFLFFFLSSLTIAAVARPVPDSSNTSPRTARDGFKVVDDVLEEESCDEIGEEYCLMRKTLAAHADYIYTDKQKP Homology
BLAST of Sed0023507 vs. NCBI nr
Match: KAG6600274.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.4 bits (337), Expect = 5.8e-28 Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of Sed0023507 vs. NCBI nr
Match: XP_022941982.1 (phytosulfokines-like [Cucurbita moschata]) HSP 1 Score: 131.0 bits (328), Expect = 6.4e-27 Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 0
BLAST of Sed0023507 vs. NCBI nr
Match: XP_022984884.1 (phytosulfokines-like [Cucurbita maxima]) HSP 1 Score: 124.4 bits (311), Expect = 6.0e-25 Identity = 74/118 (62.71%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of Sed0023507 vs. NCBI nr
Match: XP_022149343.1 (phytosulfokines-like [Momordica charantia]) HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24 Identity = 65/88 (73.86%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Sed0023507 vs. NCBI nr
Match: KAG7014931.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-22 Identity = 64/87 (73.56%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy Swiss-Prot
Match: Q9FS10 (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.3e-09 Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy Swiss-Prot
Match: Q9M2Y0 (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy Swiss-Prot
Match: Q9SZG4 (Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.9e-04 Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy TrEMBL
Match: A0A6J1FNZ6 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447189 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 3.1e-27 Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy TrEMBL
Match: A0A6J1JBS4 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111483027 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25 Identity = 74/118 (62.71%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy TrEMBL
Match: A0A6J1D6J2 (Phytosulfokine-beta OS=Momordica charantia OX=3673 GN=LOC111017778 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.5e-25 Identity = 65/88 (73.86%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy TrEMBL
Match: A0A0A0KY18 (Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22 Identity = 63/87 (72.41%), Postives = 67/87 (77.01%), Query Frame = 0
BLAST of Sed0023507 vs. ExPASy TrEMBL
Match: A0A6J1E4U5 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111430788 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22 Identity = 64/87 (73.56%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Sed0023507 vs. TAIR 10
Match: AT3G49780.1 (phytosulfokine 4 precursor ) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Sed0023507 vs. TAIR 10
Match: AT4G37720.1 (phytosulfokine 6 precursor ) HSP 1 Score: 44.7 bits (104), Expect = 5.6e-05 Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0
BLAST of Sed0023507 vs. TAIR 10
Match: AT2G22860.1 (phytosulfokine 2 precursor ) HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04 Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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