Sed0023465 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAACAAAGGCAACGAGGACCCAGACCAGGCACCAGGAGATATCGAAAGAGTAATGTCAAATCTCGAACCTGAGACCTTGAAGAGAGCATACCCTCAAAACTTAAGTCTTCAACCACCATGTCATCCCTCTCAAGATCAGAGTTGAGCTATCAGTTCACTGTTTTCCTTAGGCATACAAAAATATTTGAGCAATTAAAGACGCAACGACGGAAGGAACAAACGTAAGAACGTGAAATTCAGCCAAAAGGCGAAACCGAAACCAAACGAGAAAGTGTTGAAAGACATTAAAACTTGCAGAAACGAAACTCATCGGCACGAATTGAATGCAATCGCAACCAGCAGAGAAGAATTAAACCAAACGCACAAAACGAAACAGAATCCATATCCAATTTCATATATAAAACACACCAAATCGAAGAAGGCGTACCAGTTCAATCGAGGATCACAGGAGGAGATCGAGATAAGATCTGAAGATGCCGAACTCGGTTCCCAAAATCGTCTCCCTCCTCTTTGCCCTAGCGATTTCGTCGCCGATTCGATCGGCGTTCGCTCTCGGAATGACTCCGGATGCGGCCTGTTGGAGTGCGATTAAGGCGGTGGGAGGTTGCCAGGACGAGATCGAGACGGCGATGAAGAGGAATGAGATCGAGGTGAGTTATGGTTGTTGCAGAGTGATAATGTATGGACTGCCGGAGAGATGTGCCGCCGTGGTTTTCTCGTCTGGCGGCGAGTTTTCGCCGGAGATTGGCGGCGCGGTGAAGGAATATTGCGACGGAATGGGAGTTACTCCGCCGGTGCTCGAAGAGGATGATAAGGTTGAAGAAAATTGAGTGTTGAATACTTCGTGATTTTGTTTTACATTTATATTTAAATGAAATGTAAGTGTAAGTGCATATACTATGCTCTAACACAAAGTATGCATTATATCTTACCAGTGA GAAACAAAGGCAACGAGGACCCAGACCAGGCACCAGGAGATATCGAAAGAGTAATGTCAAATCTCGAACCTGAGACCTTGAAGAGAGCATACCCTCAAAACTTAAGTCTTCAACCACCATGTCATCCCTCTCAAGATCAGAGTTGAGCTATCAGTTCACTGTTTTCCTTAGGCATACAAAAATATTTGAGCAATTAAAGACGCAACGACGGAAGGAACAAACGTAAGAACGTGAAATTCAGCCAAAAGGCGAAACCGAAACCAAACGAGAAAGTGTTGAAAGACATTAAAACTTGCAGAAACGAAACTCATCGGCACGAATTGAATGCAATCGCAACCAGCAGAGAAGAATTAAACCAAACGCACAAAACGAAACAGAATCCATATCCAATTTCATATATAAAACACACCAAATCGAAGAAGGCGTACCAGTTCAATCGAGGATCACAGGAGGAGATCGAGATAAGATCTGAAGATGCCGAACTCGGTTCCCAAAATCGTCTCCCTCCTCTTTGCCCTAGCGATTTCGTCGCCGATTCGATCGGCGTTCGCTCTCGGAATGACTCCGGATGCGGCCTGTTGGAGTGCGATTAAGGCGGTGGGAGGTTGCCAGGACGAGATCGAGACGGCGATGAAGAGGAATGAGATCGAGGTGAGTTATGGTTGTTGCAGAGTGATAATGTATGGACTGCCGGAGAGATGTGCCGCCGTGGTTTTCTCGTCTGGCGGCGAGTTTTCGCCGGAGATTGGCGGCGCGGTGAAGGAATATTGCGACGGAATGGGAGTTACTCCGCCGGTGCTCGAAGAGGATGATAAGGTTGAAGAAAATTGAGTGTTGAATACTTCGTGATTTTGTTTTACATTTATATTTAAATGAAATGTAAGTGTAAGTGCATATACTATGCTCTAACACAAAGTATGCATTATATCTTACCAGTGA ATGCCGAACTCGGTTCCCAAAATCGTCTCCCTCCTCTTTGCCCTAGCGATTTCGTCGCCGATTCGATCGGCGTTCGCTCTCGGAATGACTCCGGATGCGGCCTGTTGGAGTGCGATTAAGGCGGTGGGAGGTTGCCAGGACGAGATCGAGACGGCGATGAAGAGGAATGAGATCGAGGTGAGTTATGGTTGTTGCAGAGTGATAATGTATGGACTGCCGGAGAGATGTGCCGCCGTGGTTTTCTCGTCTGGCGGCGAGTTTTCGCCGGAGATTGGCGGCGCGGTGAAGGAATATTGCGACGGAATGGGAGTTACTCCGCCGGTGCTCGAAGAGGATGATAAGGTTGAAGAAAATTGA MPNSVPKIVSLLFALAISSPIRSAFALGMTPDAACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPPVLEEDDKVEEN Homology
BLAST of Sed0023465 vs. NCBI nr
Match: KAA0038539.1 (hypothetical protein E6C27_scaffold92G00660 [Cucumis melo var. makuwa] >TYK31136.1 hypothetical protein E5676_scaffold455G004160 [Cucumis melo var. makuwa]) HSP 1 Score: 154.5 bits (389), Expect = 5.9e-34 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of Sed0023465 vs. NCBI nr
Match: XP_022931003.1 (uncharacterized protein LOC111437329 [Cucurbita moschata] >KAG6606231.1 hypothetical protein SDJN03_03548, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.1 bits (357), Expect = 3.0e-30 Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 0
BLAST of Sed0023465 vs. NCBI nr
Match: KAG6571831.1 (hypothetical protein SDJN03_28559, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135.6 bits (340), Expect = 2.8e-28 Identity = 74/118 (62.71%), Postives = 81/118 (68.64%), Query Frame = 0
BLAST of Sed0023465 vs. NCBI nr
Match: KAE8652857.1 (hypothetical protein Csa_023774, partial [Cucumis sativus]) HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19 Identity = 47/61 (77.05%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Sed0023465 vs. ExPASy TrEMBL
Match: A0A5A7TB28 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004160 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of Sed0023465 vs. ExPASy TrEMBL
Match: A0A0A0LEG0 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G904090 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33 Identity = 79/123 (64.23%), Postives = 91/123 (73.98%), Query Frame = 0
BLAST of Sed0023465 vs. ExPASy TrEMBL
Match: A0A6J1EX44 (uncharacterized protein LOC111437329 OS=Cucurbita moschata OX=3662 GN=LOC111437329 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.5e-30 Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 0
BLAST of Sed0023465 vs. ExPASy TrEMBL
Match: A0A7J0HBY1 (Prolamin_like domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_28g0013320 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.8e-04 Identity = 29/82 (35.37%), Postives = 44/82 (53.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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