Sed0023434 (gene) Chayote v1

Overview


Name	Sed0023434
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function (DUF1218)
Location	LG04: 42437285 .. 42439861 (+)
RNA-Seq Expression	Sed0023434
Synteny	Sed0023434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGTTTTAAAAAATTCAGAAAACGGTAGGGACATAATGGGGATTTGAGGAAGATGTTGAGACGTTCTTTTCTCTCTTTCTAATTTTGCTTCTTCTTCACTGTTCTTCAACGCAACAAAGCTTCCTCTCTGTGATTCTGATATAAACCCCATCCACAAAAGATACGCACACAACCAGAAACTTGGCCGAATCTGCTCAAGAACAGAGCATTTCGTCAATCAATGGCTTCCAAGTTGATTCTCATTGTCGTTTTTGTGCTCGATGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGTAAGCTTCAGTTTCTCGCTTCATTGTCGTTTTCTTTTGTGCTTTATACTGCAATTTTGCCGATTTGGGGTTTTTGCTTTCTGGGTCTTTTTAGTTTCTGTGATTCTGTTTGTGGGTCGTTTTGGGTTTGCTGAAATTGGTATTGCAAAATCGTGAATCGATGAGAGAAGAATCTTGCGTTTTCTGAGTTTTTTTCTTGGCGACCAAACAAGGATTTTGGGTTTCTGCTTCGAATTCGTTTGTTCATTGTTGATAATGTGGTTTAGTTAATTCATTAGAGTCGATGAATTGTTGATCTAGTTGTTAAAAAGCAGGAAAATGGAAATTGAAAATGGAGATTTTCTGTTGTTATGTATGTTGGAGAGTGTCACATAATAGAAAGGTGAGTTTTCGCAAGACATGTAGGTTACTCTCGTTACGAATTAGTTTTGGGATAAAACTGCATGCGGTCTAATATGGTCTTAAAACTCATTAAACTCAATTGAGTATTCGGATCCAACCAGATGGTCTACAAAATTGAATCCAATCTAAGTGGGTATAATTCAAATCCAATTTAAGATTGGTGAACCCAAAGAGGCACCATTTCGAAAAGGCATGACGGAGATCCTCATCTTATCTCACAATGTTATCTCACAATAGAAAGGTGAGGAGTTCTCACCATTTTTATGAGAAATATAGGTTATTCCTCTCAATACCAATTGATTTTGAGATGGAAATTTTTATTATCTAATATGTATAATTTCATAGTTTAACTATTTAAGACATGCCTCGATTAAGAGTTTGGAAATTCAAATCCTCTAACATGTAACACCTACATGTTGAACTTGAAAATATAGTTCAAGAACGACTATGCTTTGGCTTTTCTAAAATGGAGTTCTTAACTTTTCTGAAATGAAGTACAAGGGAATTTCCCTGTTCCTAACTTTTGAAAGGTTTCGAAAAGGTAGAGGTGTTTGTTTTCGATCTAGACAATTTTAAAATTTGGACAACTCTTCTCTTGTGTTTCCATTCCACCATCTCTCACTGATCCACATTGCTATGATTCTAACTTTGCTGAGAAGGTTTATCTAATGGAAGCATGCATTTTTTATTAGAATAAGGTGAAGATTGCAAACTCGATTACCGCTTTTGTCTCGTACCCTTATGTTTCTTCTCTACTTCAAAGGTCAAAGAGATGGTTTCAACTGATTAGCAAATGCTTATATGATATAATTACATTGGATTTGATTCATTTAGACTGATAATGGTGCATTGTTTTTTAGTGTTGGTAAAAATTTGTCGGCTAATTGGTTGATATTTTAAGAAATAACCTTGTTGTGTGTTTATCATCTGTTAACAGGCCACCATTGTGACAGATTCAGAAAAGAACTACAACTATTGTGTCTACGACTCCGACGTCTCAACAGGCTATGGCGTTGGTGCTTTTCTTCTTCTCATGGCTAGCCAGGCCCTCATAATGGCAGCTAGCCGATGTTTTTGTTGCGGGAAGTCGTTGAATCCTGGTGGTTCAAGGGCCTGGGCTGTTATCCTATTCATAATCTGCTGGTAAGTGAACCTATTTGTGATCTTCACTCCATCAGTTTAGGCTCGAGAAGAAAACTTCAATCTAAAGGGTTCCAATCCAACACACACAATCTTGCAGGGTATTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCTGGTTCGGTAAGGAACGCCTACCACACCAAGTACCGAACCATGTTCAGTGATGTTCCTCCCTCGTGCGAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCTTTCGTTTTCCTCAATGCCATTGTATCTGAACTCTACTATGTATTCTACTCCAAGGCAAAAGAAGGTGTCGTTCCATACTGATACAGCGGATAGACTGGCATTGGAACCTTCAACTGAGTGTATGTGTAGCTAAGTCTTATAGGTTTCTTCATCTTCTCTTGAGATGATTTTGCATATCAAGTACTGGTTTTAGTTAGGGAGAAATATCAGTCAATATCATAATTTTTACTCTGTGAAGTTCTTTGTTTTCTCTCCCTTTTAACCACTGCTGGGCTTTTCTCTAATTTTTTCTTCTTTTTGGTGGATTGTTTCATTTGTTTTGACAATAAGAGAAACATTGGCTGTATTCCTATAAATATTTGTATCTTTTATGAGACCTCAGGCATATTATATGTTCATGTATTTCTATTTTTACCACTGGGTATTTGATCATATTACAGAGAGAACTTAGAAAATTATGCCTTTTTCACATTCAAATTAAC

mRNA sequence

ACCGTTTTAAAAAATTCAGAAAACGGTAGGGACATAATGGGGATTTGAGGAAGATGTTGAGACGTTCTTTTCTCTCTTTCTAATTTTGCTTCTTCTTCACTGTTCTTCAACGCAACAAAGCTTCCTCTCTGTGATTCTGATATAAACCCCATCCACAAAAGATACGCACACAACCAGAAACTTGGCCGAATCTGCTCAAGAACAGAGCATTTCGTCAATCAATGGCTTCCAAGTTGATTCTCATTGTCGTTTTTGTGCTCGATGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGCCACCATTGTGACAGATTCAGAAAAGAACTACAACTATTGTGTCTACGACTCCGACGTCTCAACAGGCTATGGCGTTGGTGCTTTTCTTCTTCTCATGGCTAGCCAGGCCCTCATAATGGCAGCTAGCCGATGTTTTTGTTGCGGGAAGTCGTTGAATCCTGGTGGTTCAAGGGCCTGGGCTGTTATCCTATTCATAATCTGCTGGGTATTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCTGGTTCGGTAAGGAACGCCTACCACACCAAGTACCGAACCATGTTCAGTGATGTTCCTCCCTCGTGCGAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCTTTCGTTTTCCTCAATGCCATTGTATCTGAACTCTACTATGTATTCTACTCCAAGGCAAAAGAAGGTGTCGTTCCATACTGATACAGCGGATAGACTGGCATTGGAACCTTCAACTGAGTGTATGTGTAGCTAAGTCTTATAGGTTTCTTCATCTTCTCTTGAGATGATTTTGCATATCAAGTACTGGTTTTAGTTAGGGAGAAATATCAGTCAATATCATAATTTTTACTCTGTGAAGTTCTTTGTTTTCTCTCCCTTTTAACCACTGCTGGGCTTTTCTCTAATTTTTTCTTCTTTTTGGTGGATTGTTTCATTTGTTTTGACAATAAGAGAAACATTGGCTGTATTCCTATAAATATTTGTATCTTTTATGAGACCTCAGGCATATTATATGTTCATGTATTTCTATTTTTACCACTGGGTATTTGATCATATTACAGAGAGAACTTAGAAAATTATGCCTTTTTCACATTCAAATTAAC

Coding sequence (CDS)

ATGGCTTCCAAGTTGATTCTCATTGTCGTTTTTGTGCTCGATGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGCCACCATTGTGACAGATTCAGAAAAGAACTACAACTATTGTGTCTACGACTCCGACGTCTCAACAGGCTATGGCGTTGGTGCTTTTCTTCTTCTCATGGCTAGCCAGGCCCTCATAATGGCAGCTAGCCGATGTTTTTGTTGCGGGAAGTCGTTGAATCCTGGTGGTTCAAGGGCCTGGGCTGTTATCCTATTCATAATCTGCTGGGTATTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCTGGTTCGGTAAGGAACGCCTACCACACCAAGTACCGAACCATGTTCAGTGATGTTCCTCCCTCGTGCGAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCTTTCGTTTTCCTCAATGCCATTGTATCTGAACTCTACTATGTATTCTACTCCAAGGCAAAAGAAGGTGTCGTTCCATACTGA

Protein sequence

MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFLLLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHTKYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY

Homology

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BLAST of Sed0023434 vs. NCBI nr
Match: XP_022976585.1 (uncharacterized protein LOC111476938 [Cucurbita maxima] >XP_022976586.1 uncharacterized protein LOC111476938 [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 155/172 (90.12%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKL+LI+V VLDVIAFGLAVAAEQRRSTA +V DSEKNYNYCVYDSDVSTGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQALIM ASRCFCCGKSL+PGGSRAWA+ILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC+TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. NCBI nr
Match: XP_022935762.1 (uncharacterized protein LOC111442584 [Cucurbita moschata] >XP_023535137.1 uncharacterized protein LOC111796652 [Cucurbita pepo subsp. pepo] >KAG6591977.1 hypothetical protein SDJN03_14323, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024853.1 hypothetical protein SDJN02_13672 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 153/172 (88.95%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKL+LI+V VLDVIAFGLAVAAEQRRSTA +V DSEKNYNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQALIM ASRCFCCGKSL+PGGSRAWA+ILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSIRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC+TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. NCBI nr
Match: XP_031740219.1 (uncharacterized protein LOC101208795 [Cucumis sativus] >XP_031740220.1 uncharacterized protein LOC101208795 [Cucumis sativus] >KGN55148.1 hypothetical protein Csa_012625 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 5.0e-82
Identity = 154/172 (89.53%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKLILI+VFVLD+IAFGLAVAAEQRRSTA +V D EK YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQ LIMAASRCFCCGKSL+PGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC+TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. NCBI nr
Match: XP_038900268.1 (uncharacterized protein LOC120087350 [Benincasa hispida])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 154/172 (89.53%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKLILI+VFVLDVIAFGLAVAAEQRRSTA +V D EK YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQ LIM ASRCFCCGKSL+PGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQTLIMVASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC+TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. NCBI nr
Match: XP_008452482.1 (PREDICTED: uncharacterized protein LOC103493502 [Cucumis melo] >KAA0064347.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa] >TYK20240.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 309.7 bits (792), Expect = 1.6e-80
Identity = 155/172 (90.12%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKLILI+VFVLDVIAFGLAVAAEQRRSTA +V D EK+YNYCVYDSDVSTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQ LIMAASRCFCCGKSL+PGGSRA AVILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. ExPASy TrEMBL
Match: A0A6J1IJW2 (uncharacterized protein LOC111476938 OS=Cucurbita maxima OX=3661 GN=LOC111476938 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.2e-83
Identity = 155/172 (90.12%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKL+LI+V VLDVIAFGLAVAAEQRRSTA +V DSEKNYNYCVYDSDVSTGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQALIM ASRCFCCGKSL+PGGSRAWA+ILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC+TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. ExPASy TrEMBL
Match: A0A6J1F6H9 (uncharacterized protein LOC111442584 OS=Cucurbita moschata OX=3662 GN=LOC111442584 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 153/172 (88.95%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKL+LI+V VLDVIAFGLAVAAEQRRSTA +V DSEKNYNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQALIM ASRCFCCGKSL+PGGSRAWA+ILFIICWVFFFIAEVCLFAGS+RNAYHT
Sbjct: 61  LLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSIRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC+TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. ExPASy TrEMBL
Match: A0A0A0L071 (Fiber protein Fb34 OS=Cucumis sativus OX=3659 GN=Csa_4G638370 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 154/172 (89.53%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKLILI+VFVLD+IAFGLAVAAEQRRSTA +V D EK YNYCVYDSD+STGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDIIAFGLAVAAEQRRSTANVVQDKEKEYNYCVYDSDISTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQ LIMAASRCFCCGKSL+PGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC+TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. ExPASy TrEMBL
Match: A0A5A7VBE4 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003790 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.7e-81
Identity = 155/172 (90.12%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKLILI+VFVLDVIAFGLAVAAEQRRSTA +V D EK+YNYCVYDSDVSTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQ LIMAASRCFCCGKSL+PGGSRA AVILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. ExPASy TrEMBL
Match: A0A1S3BTB6 (uncharacterized protein LOC103493502 OS=Cucumis melo OX=3656 GN=LOC103493502 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.7e-81
Identity = 155/172 (90.12%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKLILI+VFVLDVIAFGLAVAAEQRRSTA +V D EK+YNYCVYDSDVSTGYGVGAFL
Sbjct: 1   MASKLILIIVFVLDVIAFGLAVAAEQRRSTANVVQDKEKDYNYCVYDSDVSTGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LLMASQ LIMAASRCFCCGKSL+PGGSRA AVILFIICWVFFFIAEVCLFAGSVRNAYHT
Sbjct: 61  LLMASQTLIMAASRCFCCGKSLSPGGSRASAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEGVVPY 173
           KYRTMF D PPSC TLRKGVFGAGAAF+FLNAIVSELYYVFYSKA+E  +PY
Sbjct: 121 KYRTMFGDNPPSCRTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPY 172

[Close]

BLAST of Sed0023434 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 247.7 bits (631), Expect = 6.9e-66
Identity = 123/173 (71.10%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASK++  +VFV ++IAFGLAVAAEQRRSTA +V D+E  YNYCVYDSD +TGYGVGAFL
Sbjct: 1   MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
             +ASQ LIM  SRCFCCGK L PGGSRA A+ILFI+ W+FF IAE+CL AGSV NAYHT
Sbjct: 61  FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFY-SKAKEGVVPY 173
           KYRTMF D PP C+TLRKGVF AGA+FVF NAIVS+ YY FY S A+  + PY
Sbjct: 121 KYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLSPY 173

[Close]

BLAST of Sed0023434 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-63
Identity = 114/168 (67.86%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKL++I+VF+LD+IA GLA+AAEQRRS   + TD +K Y+YCVY +D++T YG GAF+
Sbjct: 1   MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LL  SQ LIMAASRCFCCGKSLNPGGSRA A+ILF+ICWVFF IAE+CL A S+RNAYHT
Sbjct: 61  LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHT 120

Query: 121 KYRTMFS-DVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKE 168
           +YR M+  + PPSCE +RKGVF AGAAF    AIVS+ YYV YS+A++
Sbjct: 121 QYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARD 168

[Close]

BLAST of Sed0023434 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 231.5 bits (589), Expect = 5.1e-61
Identity = 108/169 (63.91%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MASKL++I+VF+LD+IA GLA+AAEQRRS   +V D EK + +C Y SD++T YG GAF+
Sbjct: 1   MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           LL  SQ +IM ASRCFCCGK+L PGGSRA  ++LF+ICWVFF IAEVCL AGS+RNAYHT
Sbjct: 61  LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHT 120

Query: 121 KYRTMFS-DVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKEG 169
            YR M++ + PPSCE +RKGVF AGA+F    AIVS+ YY+ YS+A++G
Sbjct: 121 TYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDG 169

[Close]

BLAST of Sed0023434 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 228.8 bits (582), Expect = 3.3e-60
Identity = 113/167 (67.66%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFL 60
           MAS L+L++VFV D+IAFGLAVAAEQRR+T  I  +S ++ +YCVYD D++TG GVG+FL
Sbjct: 1   MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFL 60

Query: 61  LLMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHT 120
           +L+ASQ LIM ASRC CCG++L P GSR+WA+ LFI  WVFFFIA+VCL AGSVRNAYHT
Sbjct: 61  VLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHT 120

Query: 121 KYRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKAKE 168
           KYR  F +  PSC +LRKGVFGAGAAF+ L  IVSELYYV  S+AK+
Sbjct: 121 KYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKD 166

[Close]

BLAST of Sed0023434 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 78/164 (47.56%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 2   ASKLILIVVFVLDVIAFGLAVAAEQRRSTATIVTDSEKNYNYCVYDSDVSTGYGVGAFLL 61
           AS L+ I+V  L ++AFG ++AAE+RRS    + D   N  +CVYDSDV+TGYGVGAFL 
Sbjct: 6   ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query: 62  LMASQALIMAASRCFCCGKSLNPGGSRAWAVILFIICWVFFFIAEVCLFAGSVRNAYHTK 121
           L++S++L+M+ ++C C G+ L PG  RAW++I FI  W+ F +AE C+ AG+ +NAYHTK
Sbjct: 66  LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTK 125

Query: 122 YRTMFSDVPPSCETLRKGVFGAGAAFVFLNAIVSELYYVFYSKA 166
           Y    S    SC +LRKG+F AGA F+    +++  YY++++K+
Sbjct: 126 Y---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:

BLAST of Sed0023434 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976585.1	1.7e-82	90.12	uncharacterized protein LOC111476938 [Cucurbita maxima] >XP_022976586.1 uncharac...	[more]
XP_022935762.1	2.9e-82	88.95	uncharacterized protein LOC111442584 [Cucurbita moschata] >XP_023535137.1 unchar...	[more]
XP_031740219.1	5.0e-82	89.53	uncharacterized protein LOC101208795 [Cucumis sativus] >XP_031740220.1 uncharact...	[more]
XP_038900268.1	1.1e-81	89.53	uncharacterized protein LOC120087350 [Benincasa hispida]	[more]
XP_008452482.1	1.6e-80	90.12	PREDICTED: uncharacterized protein LOC103493502 [Cucumis melo] >KAA0064347.1 DUF...	[more]

BLAST of Sed0023434 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJW2	8.2e-83	90.12	uncharacterized protein LOC111476938 OS=Cucurbita maxima OX=3661 GN=LOC111476938...	[more]
A0A6J1F6H9	1.4e-82	88.95	uncharacterized protein LOC111442584 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]
A0A0A0L071	2.4e-82	89.53	Fiber protein Fb34 OS=Cucumis sativus OX=3659 GN=Csa_4G638370 PE=4 SV=1	[more]
A0A5A7VBE4	7.7e-81	90.12	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BTB6	7.7e-81	90.12	uncharacterized protein LOC103493502 OS=Cucumis melo OX=3656 GN=LOC103493502 PE=...	[more]

BLAST of Sed0023434 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27435.1	6.9e-66	71.10	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	2.5e-63	67.86	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	5.1e-61	63.91	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	3.3e-60	67.66	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	1.6e-41	47.56	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 58..152 e-value: 3.1E-28 score: 98.1
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..172
None	No IPR available	PANTHER	PTHR31769:SF56	SUBFAMILY NOT NAMED	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023434.1	Sed0023434.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane