Sed0023411 (gene) Chayote v1

Overview


Name	Sed0023411
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cyclic dof factor 3-like
Location	LG08: 1278424 .. 1281249 (+)
RNA-Seq Expression	Sed0023411
Synteny	Sed0023411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCAAATTTTCTCTCGCCATTTTTGCAGTCCACTGAAGAAAAAAATGCTGGAAATTAAGATTTTCGGCAAGGAGATTCCGCTACTGGTCGACGTTGAAGTTCCGTCGATCCAAACCGATGATTCGGATTCAAGTTATGCTAAAGAAAAGGTACAGTTCGGTTCGATCATGATTTTGTGTTCTTTGTTACTCTAATCTGAAATTGATTTGTGTTTTTTTGGATTTGGTATGATTTTTACTGATTTGATGTTTGATTGTTTTTCTATTTGGTAAATATTGTACTAGGGTGAATGGCGTGTTGACTGGTTAGATGTTCTTTTGATTTTGTTGTTTTTGGTTTCTGATTTGTGATTTTGTGAACTTATTTGTTGCCAGATTTTGAGCTATTTTTGTGCTAATTATCCTTATCTGACATTTTGGGGGTCCCAGTGGATATTGATTTGGTTTTGATGTTTGAAGTTTGGGAAGAGCCTTCAAGGATTCAAATGTTAGATTGTGCATAAATCTACCTAAATCTGTGAATTTCATTCTTAAAAGCATATTTGTGAAGCACAGAGAGTCTCAATCAACTAGAGATAATCGAGCTAGAGTTCTTTTTTTTTTTGAAACAAGGTAAACCACGCCGGTCCCTAGGCCAGGCACCGGAGACATCACCGGAATAATGTCATAGCCGAGTTTCGAACCTGTGACCTTGAGGAGAGCAGAGCTAGAGTTCTTATTATTCGAGCTATAAACATCAAATTCCTTTTCGTTTTAGATATTCTTTGTTGTCTTTATATTTATGTTGTTTTTCTCAAAGTTTCAGGGGATTCCATACTTTGTTAGCTGTTTGACTGTCACTCTTTGGTAATAAACCATCATTTTAACCAACCCAAAAGAGAAGAAGATGGAACTATGGGAACAACATTTACAACTTTAAAAAAAATGTGAATTTAATAGCATTACTCTTTGTTCTTCTAGGTTATTATACTGCCAAGTACTGTCTTTAATTTGCTCTTGATGTCTGCTGTGTATATTTCAATTTATATGGTAACTGTAACTGCAAAAGGGTATTAAGAACTGTTCCAATTTTCAGGATGCAGTTTTAGGAAAACCCACCGATAGTTCAGCTGCAAAAGAGGTAACTCTTCATGATTCAGAGGACTCTATGTGTGTACAAACAGCAAGCGAGGTGCACATGAATTCTGAAGTGTTATCGGTAGATGAAAATGATAAGCTCGAAGCAAGCCAAACCAAGAAAGAACAGACTGATGCACCCGAGTCTAAAGAGAAACTGAAGAAACCAGATAAGATACTACCATGTCCCCGCTGCAAGAGCATGGAAACCAAGTTTTGTTATTACAATAATTATAATGTTAATCAACCACGCCATTTTTGCAAAGCCTGTCAAAGATATTGGACTGCAGGTGGTACCATGAGGAATGTCCCTGTTGGAGCTGGCCGCCGAAAGAACAAGAATTCCGCCGCTCACTACCGACACATTACTATCTCAGAGGCTCTTCAAGCTGCACAAATTGATGTTCCCAATGGGGTCAACCACCTTGCATCAACAAGCAATGGTCGAGTCCTCAATTTCAGTGTAAACGCACCTGTATGCGGATCTATGGCTACTGTCCCCAATCCTGCAGAAAGAAAGGTGTTGAATGGAACTAGGAATGAGTTCCAAAGACTCGAAGACCAAGTAATTAAAGCACCTTGTAAGGGTGGGGAAACTGGCGATGATTGTTCCAGTGCGTCTTCGGTGACAATGTCAAGTTCAATGGAGGAAGGAGCCAGGCGACACCCGCAAGAACCACAGATGCTGAACATCAATGGTTTTCCTCCTCAAATCCCATATCTTCCTGGTGTTCCTTGGCCTTGTCCATGGAATTCACCAATACCTCCACCAGCCTTTTGCCCTCCTGGAGTTCCTTTATCATTCTACCCTGCACCATATTGGAGCTGTACCATTCCTGGTGCTTGGAATATTCCTTGGTTCACTCCACAACCCTGTCCTCCAAATACTGGTCCAAGTTCTTCGGCGCTAGGGAAGCATTCGAGAGACAGTGGCAAACTCCAGGCTGATAACTCTGAGATGGAAAGACCTCCAAAACAGAAAAATGGATCAATTTTGGTTCCTAAAACTTTAAGGATCGATGATCCGAACGAAGCTGCTAAGAGTTCAATATGGGAAACACTTGGCATTAAGAATGATTCAATCAAAGCAGTTGATCTGTGTAAGGTCTTTCAATCAAAGACCAATCAAAAGAGTAACGCTTCTGAAGTGTTGTCTCTAGTTTTGCAAGCTAACCCTGCAGCCTTGTCAAGATCGCTTAATTTCCACGAGCGGTCGTGAATGATGCTCTAGTTATGGAAAATTTTCGTTCACGTTGCAATGGAAGTTGGATTCTCTTCCTTAACCCGGCTTACGGGTAACTTTCCTCCTCCTCTATGTAATCTACATTCCAGGTTCATTGTAAAAGAACTCTGTAAGTTCAGAAGCTTAAGCATGAAGTGGAGACAAACATCAATCTCAAGCTTCTTCTGCCCAAGAAGCAATCCAGTTTTACAAGAATTCTGGCATTGTTGTCTCTATAGAAACAGTAGCAGTGATTTTTCTCTTTTCTGTTTCGTGTTTATCGAATTAGCTAGCCATCTTTTTGTACATATCTTTACATATGTGAATAACCAATGTAGAGTTGCAGCTTAAGAATCTCAGATGTATAAAAATGCAGTCAAGTTTGCTTCAATTTTGATACTGTGTTGGTAGTCCCTTCCAACCAAACTCTAACTTAAAATCATTGTATAAATTAGATCTAGAGAAATTATTATCATCTTTGACCTGGA

mRNA sequence

CTGCAAATTTTCTCTCGCCATTTTTGCAGTCCACTGAAGAAAAAAATGCTGGAAATTAAGATTTTCGGCAAGGAGATTCCGCTACTGGTCGACGTTGAAGTTCCGTCGATCCAAACCGATGATTCGGATTCAAGTTATGCTAAAGAAAAGGATGCAGTTTTAGGAAAACCCACCGATAGTTCAGCTGCAAAAGAGGTAACTCTTCATGATTCAGAGGACTCTATGTGTGTACAAACAGCAAGCGAGGTGCACATGAATTCTGAAGTGTTATCGGTAGATGAAAATGATAAGCTCGAAGCAAGCCAAACCAAGAAAGAACAGACTGATGCACCCGAGTCTAAAGAGAAACTGAAGAAACCAGATAAGATACTACCATGTCCCCGCTGCAAGAGCATGGAAACCAAGTTTTGTTATTACAATAATTATAATGTTAATCAACCACGCCATTTTTGCAAAGCCTGTCAAAGATATTGGACTGCAGGTGGTACCATGAGGAATGTCCCTGTTGGAGCTGGCCGCCGAAAGAACAAGAATTCCGCCGCTCACTACCGACACATTACTATCTCAGAGGCTCTTCAAGCTGCACAAATTGATGTTCCCAATGGGGTCAACCACCTTGCATCAACAAGCAATGGTCGAGTCCTCAATTTCAGTGTAAACGCACCTGTATGCGGATCTATGGCTACTGTCCCCAATCCTGCAGAAAGAAAGGTGTTGAATGGAACTAGGAATGAGTTCCAAAGACTCGAAGACCAAGTAATTAAAGCACCTTGTAAGGGTGGGGAAACTGGCGATGATTGTTCCAGTGCGTCTTCGGTGACAATGTCAAGTTCAATGGAGGAAGGAGCCAGGCGACACCCGCAAGAACCACAGATGCTGAACATCAATGGTTTTCCTCCTCAAATCCCATATCTTCCTGGTGTTCCTTGGCCTTGTCCATGGAATTCACCAATACCTCCACCAGCCTTTTGCCCTCCTGGAGTTCCTTTATCATTCTACCCTGCACCATATTGGAGCTGTACCATTCCTGGTGCTTGGAATATTCCTTGGTTCACTCCACAACCCTGTCCTCCAAATACTGGTCCAAGTTCTTCGGCGCTAGGGAAGCATTCGAGAGACAGTGGCAAACTCCAGGCTGATAACTCTGAGATGGAAAGACCTCCAAAACAGAAAAATGGATCAATTTTGGTTCCTAAAACTTTAAGGATCGATGATCCGAACGAAGCTGCTAAGAGTTCAATATGGGAAACACTTGGCATTAAGAATGATTCAATCAAAGCAGTTGATCTGTGTAAGGTCTTTCAATCAAAGACCAATCAAAAGAGTAACGCTTCTGAAGTGTTGTCTCTAGTTTTGCAAGCTAACCCTGCAGCCTTGTCAAGATCGCTTAATTTCCACGAGCGGTCGTGAATGATGCTCTAGTTATGGAAAATTTTCGTTCACGTTGCAATGGAAGTTGGATTCTCTTCCTTAACCCGGCTTACGGGTAACTTTCCTCCTCCTCTATGTAATCTACATTCCAGGTTCATTGTAAAAGAACTCTGTAAGTTCAGAAGCTTAAGCATGAAGTGGAGACAAACATCAATCTCAAGCTTCTTCTGCCCAAGAAGCAATCCAGTTTTACAAGAATTCTGGCATTGTTGTCTCTATAGAAACAGTAGCAGTGATTTTTCTCTTTTCTGTTTCGTGTTTATCGAATTAGCTAGCCATCTTTTTGTACATATCTTTACATATGTGAATAACCAATGTAGAGTTGCAGCTTAAGAATCTCAGATGTATAAAAATGCAGTCAAGTTTGCTTCAATTTTGATACTGTGTTGGTAGTCCCTTCCAACCAAACTCTAACTTAAAATCATTGTATAAATTAGATCTAGAGAAATTATTATCATCTTTGACCTGGA

Coding sequence (CDS)

ATGCTGGAAATTAAGATTTTCGGCAAGGAGATTCCGCTACTGGTCGACGTTGAAGTTCCGTCGATCCAAACCGATGATTCGGATTCAAGTTATGCTAAAGAAAAGGATGCAGTTTTAGGAAAACCCACCGATAGTTCAGCTGCAAAAGAGGTAACTCTTCATGATTCAGAGGACTCTATGTGTGTACAAACAGCAAGCGAGGTGCACATGAATTCTGAAGTGTTATCGGTAGATGAAAATGATAAGCTCGAAGCAAGCCAAACCAAGAAAGAACAGACTGATGCACCCGAGTCTAAAGAGAAACTGAAGAAACCAGATAAGATACTACCATGTCCCCGCTGCAAGAGCATGGAAACCAAGTTTTGTTATTACAATAATTATAATGTTAATCAACCACGCCATTTTTGCAAAGCCTGTCAAAGATATTGGACTGCAGGTGGTACCATGAGGAATGTCCCTGTTGGAGCTGGCCGCCGAAAGAACAAGAATTCCGCCGCTCACTACCGACACATTACTATCTCAGAGGCTCTTCAAGCTGCACAAATTGATGTTCCCAATGGGGTCAACCACCTTGCATCAACAAGCAATGGTCGAGTCCTCAATTTCAGTGTAAACGCACCTGTATGCGGATCTATGGCTACTGTCCCCAATCCTGCAGAAAGAAAGGTGTTGAATGGAACTAGGAATGAGTTCCAAAGACTCGAAGACCAAGTAATTAAAGCACCTTGTAAGGGTGGGGAAACTGGCGATGATTGTTCCAGTGCGTCTTCGGTGACAATGTCAAGTTCAATGGAGGAAGGAGCCAGGCGACACCCGCAAGAACCACAGATGCTGAACATCAATGGTTTTCCTCCTCAAATCCCATATCTTCCTGGTGTTCCTTGGCCTTGTCCATGGAATTCACCAATACCTCCACCAGCCTTTTGCCCTCCTGGAGTTCCTTTATCATTCTACCCTGCACCATATTGGAGCTGTACCATTCCTGGTGCTTGGAATATTCCTTGGTTCACTCCACAACCCTGTCCTCCAAATACTGGTCCAAGTTCTTCGGCGCTAGGGAAGCATTCGAGAGACAGTGGCAAACTCCAGGCTGATAACTCTGAGATGGAAAGACCTCCAAAACAGAAAAATGGATCAATTTTGGTTCCTAAAACTTTAAGGATCGATGATCCGAACGAAGCTGCTAAGAGTTCAATATGGGAAACACTTGGCATTAAGAATGATTCAATCAAAGCAGTTGATCTGTGTAAGGTCTTTCAATCAAAGACCAATCAAAAGAGTAACGCTTCTGAAGTGTTGTCTCTAGTTTTGCAAGCTAACCCTGCAGCCTTGTCAAGATCGCTTAATTTCCACGAGCGGTCGTGA

Protein sequence

MLEIKIFGKEIPLLVDVEVPSIQTDDSDSSYAKEKDAVLGKPTDSSAAKEVTLHDSEDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEALQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLEDQVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWPCPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHSRDSGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS

Homology

[Close]

BLAST of Sed0023411 vs. NCBI nr
Match: XP_022134567.1 (cyclic dof factor 3-like [Momordica charantia])

HSP 1 Score: 737.3 bits (1902), Expect = 8.2e-209
Identity = 373/458 (81.44%), Postives = 398/458 (86.90%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAK-------EKDAVLGKPTDSSAAKEVTLHDS 63
           IKIFGKEIPL  D E+P I++DDSDSS  K       EKDAV+ + T+SS AKE T HDS
Sbjct: 9   IKIFGKEIPLPADCELPLIESDDSDSSSEKDGEYGAGEKDAVVREATESSTAKEETPHDS 68

Query: 64  EDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKS 123
           EDS C+QTA+E HMN EV S+DENDKL  ++T+KEQ DA  SKEKLKKPDKILPCPRC S
Sbjct: 69  EDSECLQTANEAHMNPEVPSIDENDKLATNKTEKEQNDATNSKEKLKKPDKILPCPRCNS 128

Query: 124 METKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEA 183
           METKFCYYNNYNVNQPRHFCKACQRYWT GGTMRNVPVGAGRRKNKNSA+ YRHITISEA
Sbjct: 129 METKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASQYRHITISEA 188

Query: 184 LQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLED 243
           LQAAQIDVPNGVN L S SNGRVLNFS+NAP C SMATV NPAE KVLNGTRNEF RLED
Sbjct: 189 LQAAQIDVPNGVNRLESESNGRVLNFSINAPACESMATVLNPAEIKVLNGTRNEFHRLED 248

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWP 303
           QVIKAPCK GETGDDCSSASSVTMSSSMEEGARR PQEPQM NINGFPPQIPYLPGVPWP
Sbjct: 249 QVIKAPCKDGETGDDCSSASSVTMSSSMEEGARRCPQEPQMQNINGFPPQIPYLPGVPWP 308

Query: 304 CPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHS 363
           C WN+PIPPPAFCPPGVPLSFYPA YWSC +PGAW+IPWF PQPC PN+GP S  LGKHS
Sbjct: 309 CSWNAPIPPPAFCPPGVPLSFYPATYWSCGVPGAWSIPWFPPQPCSPNSGPRSPTLGKHS 368

Query: 364 RDSGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLC 423
           RDS + QADNSE E PPKQKNG +LVPKTLRIDDPNEAAKSSIWETLGIKNDS KAV+L 
Sbjct: 369 RDSDRNQADNSEKEEPPKQKNGCVLVPKTLRIDDPNEAAKSSIWETLGIKNDSAKAVNLS 428

Query: 424 KVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
           KVFQSKT+QK+N SE+LS +LQANPAALSRSL FHE S
Sbjct: 429 KVFQSKTDQKNNVSEMLSPLLQANPAALSRSLTFHEHS 466

[Close]

BLAST of Sed0023411 vs. NCBI nr
Match: XP_038879380.1 (cyclic dof factor 3 [Benincasa hispida] >XP_038879381.1 cyclic dof factor 3 [Benincasa hispida])

HSP 1 Score: 725.7 bits (1872), Expect = 2.5e-205
Identity = 369/456 (80.92%), Postives = 396/456 (86.84%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAKEK-DAVL----GKPTDSSAAKEVTLHDSED 63
           IKIFGKEIPL  D EV  I++DDSDS+  KE  D  L    GK  +SSAAK+ TL DSED
Sbjct: 9   IKIFGKEIPLPADCEVSLIKSDDSDSASDKETGDGALQKDEGKANESSAAKDETLRDSED 68

Query: 64  SMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKSME 123
           S CVQTA+E HMN EV+S+DENDKLE S+ +KEQ DAP SKEKLKKPDKILPCPRC SME
Sbjct: 69  SACVQTANEAHMNPEVVSMDENDKLETSKPEKEQNDAPNSKEKLKKPDKILPCPRCNSME 128

Query: 124 TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEALQ 183
           TKFCYYNNYNVNQPRHFCKACQRYWT GGTMRNVPVGAGRRKNKNSA+HYR ITISEALQ
Sbjct: 129 TKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASHYRQITISEALQ 188

Query: 184 AAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLEDQV 243
           AAQID+PNGVN LA+ SNGRVLNFSVN PVC S++TV NPA RKVLNGTRNEF RL+DQ 
Sbjct: 189 AAQIDIPNGVNCLATKSNGRVLNFSVNTPVCESLSTVLNPAGRKVLNGTRNEFHRLDDQG 248

Query: 244 IKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWPCP 303
           IKAPCKGGETGDDCSSASSVTMSSSMEEGARR PQEPQM NINGF PQIPYLPGVPWPC 
Sbjct: 249 IKAPCKGGETGDDCSSASSVTMSSSMEEGARRCPQEPQMQNINGFAPQIPYLPGVPWPCS 308

Query: 304 WNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHSRD 363
           WN P+PPPAFCPPGVPLSFYPA YWSC +PGAWN PWF PQPC PN+G +S  LGKHSRD
Sbjct: 309 WNPPMPPPAFCPPGVPLSFYPATYWSCGVPGAWNFPWFPPQPCSPNSGANSPTLGKHSRD 368

Query: 364 SGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKV 423
           S KLQADN E E PPKQKNGS+L+PKTLRIDDPNEAAKSSIWETLGIKNDS +AV+L KV
Sbjct: 369 SDKLQADNCEKEEPPKQKNGSVLIPKTLRIDDPNEAAKSSIWETLGIKNDSNRAVNLSKV 428

Query: 424 FQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
           FQSK +QK++ SEVLS VLQANPAALSRSL FHERS
Sbjct: 429 FQSKGDQKNSVSEVLSPVLQANPAALSRSLTFHERS 464

[Close]

BLAST of Sed0023411 vs. NCBI nr
Match: XP_004138169.2 (cyclic dof factor 3 [Cucumis sativus] >KGN63675.1 hypothetical protein Csa_014234 [Cucumis sativus])

HSP 1 Score: 721.5 bits (1861), Expect = 4.6e-204
Identity = 370/459 (80.61%), Postives = 395/459 (86.06%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAKEK---DAVL----GKPTDSSAAKEVTLHDS 63
           IKIFGKEI L  D EV  I+TDD DS    +K   D  L    GK ++SSA KE TLHDS
Sbjct: 9   IKIFGKEIQLPPDCEVSLIETDDDDSDSFSDKQPGDGALLKDVGKVSESSAGKEETLHDS 68

Query: 64  EDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKS 123
           EDS CVQTA+E HMN EV+S+DENDKLE S+ +KEQ  AP SKEKLKKPDKILPCPRC S
Sbjct: 69  EDSACVQTANEAHMNPEVVSMDENDKLETSKPEKEQNGAPNSKEKLKKPDKILPCPRCNS 128

Query: 124 METKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEA 183
           METKFCYYNNYNVNQPRHFCKACQRYWT GGTMRNVPVGAGRRKNKNSA+HYR ITISEA
Sbjct: 129 METKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASHYRQITISEA 188

Query: 184 LQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLED 243
           LQAAQIDVPNG+N LA+ SNGRVLNFSVNAPVC SM+TV NPA RKVLNGTRNEF R +D
Sbjct: 189 LQAAQIDVPNGINCLATKSNGRVLNFSVNAPVCESMSTVLNPAGRKVLNGTRNEFYRPDD 248

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWP 303
           Q IKAPCKGGETGDDCSSASSVTMSSSMEEGARR PQEPQM NINGFPPQIPYLPGVPWP
Sbjct: 249 QGIKAPCKGGETGDDCSSASSVTMSSSMEEGARRCPQEPQMQNINGFPPQIPYLPGVPWP 308

Query: 304 CPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHS 363
           C WN+P+PPPAFCPPGVPL FYPA YWSC +PGAWNIPWF PQPC  N+G +S  LGKHS
Sbjct: 309 CSWNAPMPPPAFCPPGVPLPFYPATYWSCGVPGAWNIPWFPPQPCSQNSGANSPTLGKHS 368

Query: 364 RDSG-KLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL 423
           RD G KLQADNSE E PPKQKNGS+L+PKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL
Sbjct: 369 RDVGDKLQADNSEKEEPPKQKNGSVLIPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL 428

Query: 424 CKVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
            KVFQSK  QK++ SE+LS VLQANPAALSRS+ FHERS
Sbjct: 429 SKVFQSKGEQKNSVSEMLSPVLQANPAALSRSITFHERS 467

[Close]

BLAST of Sed0023411 vs. NCBI nr
Match: XP_023531924.1 (cyclic dof factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 718.0 bits (1852), Expect = 5.1e-203
Identity = 366/458 (79.91%), Postives = 392/458 (85.59%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAK-------EKDAVLGKPTDSSAAKEVTLHDS 63
           I+IFGKEIPL  D E P +++DDSDSS  K       EK A++GK  +SSAAKE TLHDS
Sbjct: 9   IRIFGKEIPLPADSEAPLMESDDSDSSSEKENRDGAVEKHAIVGKAAESSAAKEETLHDS 68

Query: 64  EDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKS 123
           ED  CV+TA+EVHMN EVLS DENDKL AS+T+KEQ DAP SKEKLKKPDKILPCPRC S
Sbjct: 69  EDYACVKTANEVHMNPEVLSADENDKLAASKTEKEQNDAPNSKEKLKKPDKILPCPRCNS 128

Query: 124 METKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEA 183
           METKFCYYNNYNVNQPRHFCKACQRYWT GGT+RNVPVGAGRRKNKNSA+HY+HITISEA
Sbjct: 129 METKFCYYNNYNVNQPRHFCKACQRYWTEGGTIRNVPVGAGRRKNKNSASHYQHITISEA 188

Query: 184 LQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLED 243
           L+AAQIDVP  VNHLAS  NGRVLNFSV+APVC SM  V +PAERKVLNGTRNEF+    
Sbjct: 189 LRAAQIDVPIEVNHLASKGNGRVLNFSVSAPVCESMVNVSHPAERKVLNGTRNEFEG--- 248

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWP 303
              K PC+GGETGDDCSSASSVTMSSSME GAR  PQEPQM NINGFP QIP LPGVPWP
Sbjct: 249 --AKGPCEGGETGDDCSSASSVTMSSSMENGARGFPQEPQMQNINGFPSQIPCLPGVPWP 308

Query: 304 CPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHS 363
           C W +PIPPPAFCPPGVPLSFYPA YWSC+ PG+WNIPWFTPQPCPP  GP+S  LGKHS
Sbjct: 309 CSWTAPIPPPAFCPPGVPLSFYPATYWSCSAPGSWNIPWFTPQPCPPIPGPNSPTLGKHS 368

Query: 364 RDSGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLC 423
           RD  +LQADNSEME PPKQKNGS+LVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL 
Sbjct: 369 RDGDELQADNSEMENPPKQKNGSVLVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLS 428

Query: 424 KVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
            VFQSK +QKSN SEVLS VLQANPAALSRSL FHERS
Sbjct: 429 NVFQSKGDQKSNVSEVLSPVLQANPAALSRSLTFHERS 461

[Close]

BLAST of Sed0023411 vs. NCBI nr
Match: KAG6587543.1 (Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 715.3 bits (1845), Expect = 3.3e-202
Identity = 365/458 (79.69%), Postives = 390/458 (85.15%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAK-------EKDAVLGKPTDSSAAKEVTLHDS 63
           I+IFGK+IPL  D E P +Q+DD DSS  K       EKDAV+GK T+SSAAKE TLHDS
Sbjct: 9   IRIFGKKIPLPADFEAPLMQSDDLDSSSEKENRDGAVEKDAVVGKATESSAAKEETLHDS 68

Query: 64  EDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKS 123
           ED  CV+TA+E HMN EVLS DENDKL AS+T+KE+ DAP SKE+LKKPDKILPCPRC S
Sbjct: 69  EDYACVETANEAHMNPEVLSADENDKLAASKTEKERNDAPNSKERLKKPDKILPCPRCNS 128

Query: 124 METKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEA 183
           METKFCYYNNYNVNQPRHFCKACQRYWT GGT+RNVPVGAGRRKNKNSA+HYRHITISEA
Sbjct: 129 METKFCYYNNYNVNQPRHFCKACQRYWTEGGTIRNVPVGAGRRKNKNSASHYRHITISEA 188

Query: 184 LQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLED 243
           L+AAQIDVP  VNHLAS  NGRVLNFSV+APVC SM  V NPAERKVLNGTRNEF+    
Sbjct: 189 LRAAQIDVPIEVNHLASKGNGRVLNFSVSAPVCESMVNVLNPAERKVLNGTRNEFEG--- 248

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWP 303
              K PC+GGETGDDCSSASSVTMSSSME GAR  PQEPQM NINGFP QIP LPGVPWP
Sbjct: 249 --AKGPCEGGETGDDCSSASSVTMSSSMENGARGFPQEPQMQNINGFPSQIPCLPGVPWP 308

Query: 304 CPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHS 363
           C W +PIPPPAFCPPGVPLS YPA YWSC  PG+WNIPWFTPQPCPP  GP+S  LGKHS
Sbjct: 309 CSWTAPIPPPAFCPPGVPLSLYPATYWSCNAPGSWNIPWFTPQPCPPIPGPNSPTLGKHS 368

Query: 364 RDSGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLC 423
           RD  +LQADNS+ME PPKQKNGS+LVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL 
Sbjct: 369 RDGDELQADNSKMENPPKQKNGSVLVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLS 428

Query: 424 KVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
            VFQSK +QKSN SEVLS VLQANPAALSRSL FHERS
Sbjct: 429 NVFQSKGDQKSNVSEVLSPVLQANPAALSRSLTFHERS 461

[Close]

BLAST of Sed0023411 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 330.5 bits (846), Expect = 3.0e-89
Identity = 226/468 (48.29%), Postives = 274/468 (58.55%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAKEKDAVLGKPTDSSAAKEVTLHDSEDSMCVQ 63
           IK+FG +IP     E      DD +  ++   D    K T         L D  ++ C  
Sbjct: 10  IKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSPEKVTPE-------LSDKNNNNCND 69

Query: 64  TASEVHMNSEVLSVDE---NDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKSMETK 123
            +   +   E L  +E    D++E+S T ++        + LKKP KILPCPRCKSMETK
Sbjct: 70  NSFN-NSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETK 129

Query: 124 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEALQAA 183
           FCYYNNYN+NQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK+S++HYRHITISEAL+AA
Sbjct: 130 FCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISEALEAA 189

Query: 184 QIDVPNGVNHLASTSNGRVLNFSVNAP---VCGSMATVPNPAE-RKVLNGTRNEFQRLED 243
           ++D           +N RVL+F + A    V   M  V    E +KV NG RN F  L D
Sbjct: 190 RLDP-------GLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLAD 249

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSS--SMEEGARRHPQ--EPQM-----LNINGFPPQI 303
           Q + A     E GDDCSS SSVT S+  S++E   +     E QM      N+NG+    
Sbjct: 250 QRLVARV---ENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNNMNGY---- 309

Query: 304 PYLPGVPWPCPWNSPIPPPAFC-PPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTG 363
             +PGVPWP  WN  +PPP F  PPG P+ FY  PYW+  +           Q C     
Sbjct: 310 ACIPGVPWPYTWNPAMPPPGFYPPPGYPMPFY--PYWTIPMLPPHQSSSPISQKCSNTNS 369

Query: 364 PSSSALGKHSRDSGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIK 423
           P+   LGKH RD G  + DN E ER  KQK G +LVPKTLRIDDPNEAAKSSIW TLGIK
Sbjct: 370 PT---LGKHPRDEGSSKKDN-ETER--KQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIK 429

Query: 424 NDSI-KAVDLCKVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHER 454
           N+++ KA  + K F  KT   +N     S VL ANPAALSRS NFHE+
Sbjct: 430 NEAMCKAGGMFKGFDHKTKMYNNDKAENSPVLSANPAALSRSHNFHEQ 447

[Close]

BLAST of Sed0023411 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 2.4e-70
Identity = 206/502 (41.04%), Postives = 261/502 (51.99%), Query Frame = 0


Query: 4   IKIFGKEIPL---------------LVDVEVP-----SIQTDDSDSSYAKEKDAVLGKPT 63
           IK+FGK IPL               L + ++P     S   DD D       D+ LG+  
Sbjct: 6   IKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMG---DSGLGREE 65

Query: 64  -----DSSAAKEVTLHDSEDSMCVQTASEVHMNSEVLS----VDENDKLEASQTKKEQTD 123
                D     E    + +DS C + +     N    +     ++ +  +A++T +E   
Sbjct: 66  GDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGG 125

Query: 124 APESKE-KLKKPDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVP 183
              S+E KLKKPDKILPCPRC SMETKFCYYNNYNVNQPRHFCK CQRYWTAGGTMRNVP
Sbjct: 126 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 185

Query: 184 VGAGRRKNKNSAAHY-RHITI--SEALQ-AAQIDV--PNGVNHLASTSNGRVLNFSVNAP 243
           VGAGRRKNK+ A+HY RH++I  +EA+Q  A+ D+  PNG N         +L F  ++ 
Sbjct: 186 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGAN---------LLTFGSDSV 245

Query: 244 VCGSMATVPNPAERKVLNGTRNEFQRLEDQVIKAPCKGGETGDDCSSASSVTMSSSMEEG 303
           +C SMA+  N  E+ +L             V++ P +G +         +V ++ + EE 
Sbjct: 246 LCESMASGLNLVEKSLLK---------TQTVLQEPNEGLKI--------TVPLNQTNEEA 305

Query: 304 ARRHPQEPQMLNINGFPPQIPYLPGVP--WPCPWNSPIPPPAFCPPGVPLSFYPAP-YWS 363
               P            P++P  PG P  WP  WN              L FYP P YWS
Sbjct: 306 GTVSPL-----------PKVPCFPGPPPTWPYAWNG--------VSWTILPFYPPPAYWS 365

Query: 364 C--TIPGAWNIPWFTPQP-CPPNTGPSSSALGKHSRDS-----GKLQADNSEMERPPKQK 423
           C    PGAWN   + PQP  P  + P+S  LGKHSRD      G    +   + R   + 
Sbjct: 366 CPGVSPGAWNSFTWMPQPNSPSGSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKP 425

Query: 424 NGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKVFQSKTNQKSNASE----V 455
              + VPKTLRIDDP EAAKSSIWETLGIK D  +  D    F+S T +KS+ SE     
Sbjct: 426 ERCLWVPKTLRIDDPEEAAKSSIWETLGIKKD--ENADTFGAFRSSTKEKSSLSEGRLPG 457

[Close]

BLAST of Sed0023411 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-58
Identity = 162/377 (42.97%), Postives = 194/377 (51.46%), Query Frame = 0


Query: 81  DKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQ 140
           D+ E     K  TD  E  + LKKP KILPCPRC SMETKFCYYNNYNVNQPRHFCKACQ
Sbjct: 26  DEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQ 85

Query: 141 RYWTAGGTMRNVPVGAGRRKNKNSA--AHYRHITISEALQAAQIDVPNGVNHLASTSNGR 200
           RYWT+GGTMR+VP+GAGRRKNKN++  +HY H+TISE                   +NG 
Sbjct: 86  RYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE-------------------TNGP 145

Query: 201 VLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLEDQVIKAPCKGGETGDDCSSASSV 260
           VL+FS+                                            GDD   +S+ 
Sbjct: 146 VLSFSL--------------------------------------------GDDQKVSSNR 205

Query: 261 TMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWPCPWNSPIPPPAFCPPGVPLSFY 320
             +  +      + +       NG    +   PGV WP  WN     PAF P        
Sbjct: 206 FGNQKLVARIENNDERSNNNTSNG----LNCFPGVSWPYTWN-----PAFYP-------- 265

Query: 321 PAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHSRDSGKLQADNSEMERPPKQKNG 380
             PYWS  +  +           P ++ P+S+ LGKHSRD  +            KQ+NG
Sbjct: 266 VYPYWSMPVLSS-----------PVSSSPTST-LGKHSRDEDETVKQ--------KQRNG 297

Query: 381 SILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKVFQSKTNQK-SNASEV-LSLV 440
           S+LVPKTLRIDDPNEAAKSSIW TLGIKN+      +   F SK   K SN  E   SLV
Sbjct: 326 SVLVPKTLRIDDPNEAAKSSIWTTLGIKNEV-----MFNGFGSKKEVKLSNKEETETSLV 297

Query: 441 LQANPAALSRSLNFHER 454
           L ANPAALSRS+NFHE+
Sbjct: 386 LCANPAALSRSINFHEQ 297

[Close]

BLAST of Sed0023411 vs. ExPASy Swiss-Prot
Match: Q9SEZ3 (Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.2e-38
Identity = 154/480 (32.08%), Postives = 217/480 (45.21%), Query Frame = 0


Query: 3   EIKIFGKEIPLLVDV------------EVPSIQTDDSDSSYAKEKDAVLGKPTDSSAAKE 62
           EIK+FG+ I  L+DV            +V S  + +  SS +      +G         E
Sbjct: 8   EIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIRVPVKKSE 67

Query: 63  VTLHDSEDSMCVQTASEVHMNSEVLSVDENDK------LEASQTKKEQTDAPESKEKLKK 122
              +  +D   +   +E       +S   + K       E + T    T + E    LKK
Sbjct: 68  QESNKFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGEKSTALKK 127

Query: 123 PDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKN- 182
           PDK++PCPRC+S  TKFCYYNNYNVNQPR+FC+ CQRYWTAGG+MRNVPVG+GRRKNK  
Sbjct: 128 PDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGW 187

Query: 183 -SAAHYRHITISEALQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERK 242
            S+ HY  +T  +                 + ++G +L+F        S ++V    +  
Sbjct: 188 PSSNHYLQVTSEDC---------------DNNNSGTILSFG------SSESSVTETGKH- 247

Query: 243 VLNGTRNEFQRLEDQVIKAPCKGGETGDDCS-SASSVTMSSSMEEGARRHPQEPQMLNIN 302
                                   ++GD    SA SV+  +   +G              
Sbjct: 248 ------------------------QSGDTAKISADSVSQENKSYQGF------------- 307

Query: 303 GFPPQIPYLP--GVPWPCPWNSPIPPPAFCPPGVPLSFYPAP-YWSCTIPGAWNIPWFTP 362
             PPQ+  LP    PWP  W+         P G   SFYP P YW CT+P         P
Sbjct: 308 -LPPQV-MLPNNSSPWPYQWS---------PTGPNASFYPVPFYWGCTVP-------IYP 367

Query: 363 QPCPPNTGPSSSALGKHSRD--SGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAK 422
                 T  +SS LGK SRD   G++   N+ +     +     LV ++LR++   EA+K
Sbjct: 368 ------TSETSSCLGKRSRDQTEGRINDTNTTITTTRAR-----LVSESLRMN--IEASK 395

Query: 423 SSIWETLGIKND-SIKAVDLCKVFQSKTNQKSNASEVLSLV---LQANPAALSRSLNFHE 453
           S++W  L  K +   +   L   F +K N  SN S ++S     LQANPAA+SR++NF E
Sbjct: 428 SAVWSKLPTKPEKKTQGFSLFNGFDTKGN--SNRSSLVSETSHSLQANPAAMSRAMNFRE 395

[Close]

BLAST of Sed0023411 vs. ExPASy Swiss-Prot
Match: Q9LQX4 (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.6e-29
Identity = 135/426 (31.69%), Postives = 191/426 (44.84%), Query Frame = 0


Query: 42  PTDSSAAKEVTLHDSEDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQ-------TD 101
           P  SS++   +L      M  Q+ ++ + + ++ S   N+  E S+   +Q       T 
Sbjct: 32  PDSSSSSSSSSLSLRPHMMNNQSVTD-NTSLKLSSNLNNESKETSENSDDQHSEITTITS 91

Query: 102 APESKEKLKKPDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPV 161
             E   +LKKPDKILPCPRC S +TKFCYYNNYNVNQPRHFC+ CQRYWTAGG+MR VPV
Sbjct: 92  EEEKTTELKKPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPV 151

Query: 162 GAGRRKNKN--SAAHYRHITISEALQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSM 221
           G+GRRKNK   S+  Y HIT SE       D  N      ++S+ ++L+F          
Sbjct: 152 GSGRRKNKGWVSSDQYLHIT-SE-------DTDN-----YNSSSTKILSF---------- 211

Query: 222 ATVPNPAERKVLNGTRNEFQRLEDQVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHP 281
                                             E+ D   +      S+ ++  A    
Sbjct: 212 ----------------------------------ESSDSLVTERPKHQSNEVKINAEPVS 271

Query: 282 QEPQMLNING-FPPQI-PYLPGVPWPCPWNSPIPPPAFCPPGVPLSFYPAP-YWSCTIPG 341
           QEP   N  G  PPQ  P  P  PWP  +          PP    SFY  P YW C IP 
Sbjct: 272 QEPN--NFQGLLPPQASPVSP--PWPYQY----------PPNP--SFYHMPVYWGCAIP- 331

Query: 342 AWNIPWFTPQPCPPNTGPSSSALGKHSRDSGKLQADNSEMERPPKQKNGSILVPKTLRID 401
            W            +T  +S+ LGK +RD     +  +  E     +  S+L+      +
Sbjct: 332 VW------------STLDTSTCLGKRTRDE---TSHETVKESKNAFERTSLLLESQSIKN 364

Query: 402 DPNEAAKSSIWETLGIKNDSIKAVDLCKVFQSKTNQKSNASEVLS---LVLQANPAALSR 453
           + + A  + +W  + +  +  +       F +    KS+ +  +    L LQANPAA++R
Sbjct: 392 ETSMATNNHVWYPVPMTREKTQEFSF---FSNGAETKSSNNRFVPETYLNLQANPAAMAR 364

[Close]

BLAST of Sed0023411 vs. ExPASy TrEMBL
Match: A0A6J1BZY6 (cyclic dof factor 3-like OS=Momordica charantia OX=3673 GN=LOC111006802 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 4.0e-209
Identity = 373/458 (81.44%), Postives = 398/458 (86.90%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAK-------EKDAVLGKPTDSSAAKEVTLHDS 63
           IKIFGKEIPL  D E+P I++DDSDSS  K       EKDAV+ + T+SS AKE T HDS
Sbjct: 9   IKIFGKEIPLPADCELPLIESDDSDSSSEKDGEYGAGEKDAVVREATESSTAKEETPHDS 68

Query: 64  EDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKS 123
           EDS C+QTA+E HMN EV S+DENDKL  ++T+KEQ DA  SKEKLKKPDKILPCPRC S
Sbjct: 69  EDSECLQTANEAHMNPEVPSIDENDKLATNKTEKEQNDATNSKEKLKKPDKILPCPRCNS 128

Query: 124 METKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEA 183
           METKFCYYNNYNVNQPRHFCKACQRYWT GGTMRNVPVGAGRRKNKNSA+ YRHITISEA
Sbjct: 129 METKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASQYRHITISEA 188

Query: 184 LQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLED 243
           LQAAQIDVPNGVN L S SNGRVLNFS+NAP C SMATV NPAE KVLNGTRNEF RLED
Sbjct: 189 LQAAQIDVPNGVNRLESESNGRVLNFSINAPACESMATVLNPAEIKVLNGTRNEFHRLED 248

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWP 303
           QVIKAPCK GETGDDCSSASSVTMSSSMEEGARR PQEPQM NINGFPPQIPYLPGVPWP
Sbjct: 249 QVIKAPCKDGETGDDCSSASSVTMSSSMEEGARRCPQEPQMQNINGFPPQIPYLPGVPWP 308

Query: 304 CPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHS 363
           C WN+PIPPPAFCPPGVPLSFYPA YWSC +PGAW+IPWF PQPC PN+GP S  LGKHS
Sbjct: 309 CSWNAPIPPPAFCPPGVPLSFYPATYWSCGVPGAWSIPWFPPQPCSPNSGPRSPTLGKHS 368

Query: 364 RDSGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLC 423
           RDS + QADNSE E PPKQKNG +LVPKTLRIDDPNEAAKSSIWETLGIKNDS KAV+L 
Sbjct: 369 RDSDRNQADNSEKEEPPKQKNGCVLVPKTLRIDDPNEAAKSSIWETLGIKNDSAKAVNLS 428

Query: 424 KVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
           KVFQSKT+QK+N SE+LS +LQANPAALSRSL FHE S
Sbjct: 429 KVFQSKTDQKNNVSEMLSPLLQANPAALSRSLTFHEHS 466

[Close]

BLAST of Sed0023411 vs. ExPASy TrEMBL
Match: A0A0A0LP47 (AOBP (Ascorbate oxidase promoter-binding protein) OS=Cucumis sativus OX=3659 GN=Csa_1G009790 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 2.2e-204
Identity = 370/459 (80.61%), Postives = 395/459 (86.06%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAKEK---DAVL----GKPTDSSAAKEVTLHDS 63
           IKIFGKEI L  D EV  I+TDD DS    +K   D  L    GK ++SSA KE TLHDS
Sbjct: 9   IKIFGKEIQLPPDCEVSLIETDDDDSDSFSDKQPGDGALLKDVGKVSESSAGKEETLHDS 68

Query: 64  EDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKS 123
           EDS CVQTA+E HMN EV+S+DENDKLE S+ +KEQ  AP SKEKLKKPDKILPCPRC S
Sbjct: 69  EDSACVQTANEAHMNPEVVSMDENDKLETSKPEKEQNGAPNSKEKLKKPDKILPCPRCNS 128

Query: 124 METKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEA 183
           METKFCYYNNYNVNQPRHFCKACQRYWT GGTMRNVPVGAGRRKNKNSA+HYR ITISEA
Sbjct: 129 METKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASHYRQITISEA 188

Query: 184 LQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLED 243
           LQAAQIDVPNG+N LA+ SNGRVLNFSVNAPVC SM+TV NPA RKVLNGTRNEF R +D
Sbjct: 189 LQAAQIDVPNGINCLATKSNGRVLNFSVNAPVCESMSTVLNPAGRKVLNGTRNEFYRPDD 248

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWP 303
           Q IKAPCKGGETGDDCSSASSVTMSSSMEEGARR PQEPQM NINGFPPQIPYLPGVPWP
Sbjct: 249 QGIKAPCKGGETGDDCSSASSVTMSSSMEEGARRCPQEPQMQNINGFPPQIPYLPGVPWP 308

Query: 304 CPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHS 363
           C WN+P+PPPAFCPPGVPL FYPA YWSC +PGAWNIPWF PQPC  N+G +S  LGKHS
Sbjct: 309 CSWNAPMPPPAFCPPGVPLPFYPATYWSCGVPGAWNIPWFPPQPCSQNSGANSPTLGKHS 368

Query: 364 RDSG-KLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL 423
           RD G KLQADNSE E PPKQKNGS+L+PKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL
Sbjct: 369 RDVGDKLQADNSEKEEPPKQKNGSVLIPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDL 428

Query: 424 CKVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
            KVFQSK  QK++ SE+LS VLQANPAALSRS+ FHERS
Sbjct: 429 SKVFQSKGEQKNSVSEMLSPVLQANPAALSRSITFHERS 467

[Close]

BLAST of Sed0023411 vs. ExPASy TrEMBL
Match: A0A5A7UT96 (Cyclic dof factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002500 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.4e-201
Identity = 366/461 (79.39%), Postives = 391/461 (84.82%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDS-----SYAKEKDAVL----GKPTDSSAAKEVTLH 63
           IKIFGKEI L  D E+  I++DD D      S  +  D  L    GK ++SSAAKE TLH
Sbjct: 9   IKIFGKEIQLPPDCELSFIESDDDDDHSDSFSDKQPGDGALPKDVGKASESSAAKEETLH 68

Query: 64  DSEDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRC 123
           DSEDS CVQTA+E HMN EV+S+DENDKLE  + +KEQ DAP SKEKLKKPDKILPCPRC
Sbjct: 69  DSEDSACVQTANEAHMNPEVVSMDENDKLETGKPEKEQNDAPNSKEKLKKPDKILPCPRC 128

Query: 124 KSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITIS 183
            SMETKFCYYNNYNVNQPRHFCKACQRYWT GGTMRNVPVGAGRRKNKNSA+HYR ITIS
Sbjct: 129 NSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASHYRQITIS 188

Query: 184 EALQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRL 243
           EALQAAQIDVPNGVN LA+ SNGRVLNFSVNAPVC SM+TV NP  RKVLNGTRNEF R 
Sbjct: 189 EALQAAQIDVPNGVNCLATKSNGRVLNFSVNAPVCESMSTVLNPTGRKVLNGTRNEFYRP 248

Query: 244 EDQVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVP 303
           +DQ IKAPCKGGETGD+CSSASSVTMSSSMEEGARR PQEPQM NINGFPPQIPYLP VP
Sbjct: 249 DDQGIKAPCKGGETGDECSSASSVTMSSSMEEGARRCPQEPQMQNINGFPPQIPYLPSVP 308

Query: 304 WPCPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGK 363
           WPC WN+P+PPP FCPPGVPL FYPA YWSC +PGAWNIPWF PQPC  N+G +S  LGK
Sbjct: 309 WPCSWNAPVPPPTFCPPGVPLPFYPATYWSCGVPGAWNIPWFPPQPCSQNSGANSPTLGK 368

Query: 364 HSRDSG-KLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAV 423
           HSRD G KLQADNSE E PPKQKNGS+L+PKTLRIDDPNEAAKSSIWETLGIKNDSIKAV
Sbjct: 369 HSRDGGDKLQADNSEKEEPPKQKNGSVLIPKTLRIDDPNEAAKSSIWETLGIKNDSIKAV 428

Query: 424 DLCKVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
           DL KVFQSK  QK++ SEVLS VLQANPAALSRS  FHERS
Sbjct: 429 DLSKVFQSKGEQKNSVSEVLSPVLQANPAALSRSRTFHERS 469

[Close]

BLAST of Sed0023411 vs. ExPASy TrEMBL
Match: A0A1S3BWG5 (cyclic dof factor 3 OS=Cucumis melo OX=3656 GN=LOC103493996 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.4e-201
Identity = 366/461 (79.39%), Postives = 391/461 (84.82%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDS-----SYAKEKDAVL----GKPTDSSAAKEVTLH 63
           IKIFGKEI L  D E+  I++DD D      S  +  D  L    GK ++SSAAKE TLH
Sbjct: 9   IKIFGKEIQLPPDCELSFIESDDDDDHSDSFSDKQPGDGALPKDVGKASESSAAKEETLH 68

Query: 64  DSEDSMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRC 123
           DSEDS CVQTA+E HMN EV+S+DENDKLE  + +KEQ DAP SKEKLKKPDKILPCPRC
Sbjct: 69  DSEDSACVQTANEAHMNPEVVSMDENDKLETGKPEKEQNDAPNSKEKLKKPDKILPCPRC 128

Query: 124 KSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITIS 183
            SMETKFCYYNNYNVNQPRHFCKACQRYWT GGTMRNVPVGAGRRKNKNSA+HYR ITIS
Sbjct: 129 NSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASHYRQITIS 188

Query: 184 EALQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRL 243
           EALQAAQIDVPNGVN LA+ SNGRVLNFSVNAPVC SM+TV NP  RKVLNGTRNEF R 
Sbjct: 189 EALQAAQIDVPNGVNCLATKSNGRVLNFSVNAPVCESMSTVLNPTGRKVLNGTRNEFYRP 248

Query: 244 EDQVIKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVP 303
           +DQ IKAPCKGGETGD+CSSASSVTMSSSMEEGARR PQEPQM NINGFPPQIPYLP VP
Sbjct: 249 DDQGIKAPCKGGETGDECSSASSVTMSSSMEEGARRCPQEPQMQNINGFPPQIPYLPSVP 308

Query: 304 WPCPWNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGK 363
           WPC WN+P+PPP FCPPGVPL FYPA YWSC +PGAWNIPWF PQPC  N+G +S  LGK
Sbjct: 309 WPCSWNAPVPPPTFCPPGVPLPFYPATYWSCGVPGAWNIPWFPPQPCSQNSGANSPTLGK 368

Query: 364 HSRDSG-KLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAV 423
           HSRD G KLQADNSE E PPKQKNGS+L+PKTLRIDDPNEAAKSSIWETLGIKNDSIKAV
Sbjct: 369 HSRDGGDKLQADNSEKEEPPKQKNGSVLIPKTLRIDDPNEAAKSSIWETLGIKNDSIKAV 428

Query: 424 DLCKVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
           DL KVFQSK  QK++ SEVLS VLQANPAALSRS  FHERS
Sbjct: 429 DLSKVFQSKGEQKNSVSEVLSPVLQANPAALSRSRTFHERS 469

[Close]

BLAST of Sed0023411 vs. ExPASy TrEMBL
Match: A0A6J1E146 (cyclic dof factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429843 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 6.8e-201
Identity = 365/456 (80.04%), Postives = 390/456 (85.53%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAKEK--DAV---LGKPTDSSAAKEVTLHDSED 63
           IKIFGKEI L  D EVP I++DDSDSS  KE   +AV   +GK T++SAAKE TLHDSED
Sbjct: 9   IKIFGKEIQLPADCEVPLIESDDSDSSSQKENRDEAVEKDVGKATENSAAKEETLHDSED 68

Query: 64  SMCVQTASEVHMNSEVLSVDENDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKSME 123
           S CVQTA+E HM+ EVLS+DENDK E     KEQ DAP SKEKLKKPDKILPCPRC SME
Sbjct: 69  SACVQTANEAHMDPEVLSMDENDKPE-----KEQNDAPNSKEKLKKPDKILPCPRCNSME 128

Query: 124 TKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEALQ 183
           TKFCYYNNYNVNQPRHFCKACQRYWT GG  RNVPVGAGRRKNKNSA+HYRHITISEALQ
Sbjct: 129 TKFCYYNNYNVNQPRHFCKACQRYWTEGGNRRNVPVGAGRRKNKNSASHYRHITISEALQ 188

Query: 184 AAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLEDQV 243
           AAQ+D+PNGVNHL S SNGRVLNFSVN  VC SMATV NP E KVLNGTRNEF RLEDQ 
Sbjct: 189 AAQMDIPNGVNHLPSKSNGRVLNFSVNTSVCESMATVLNPPEIKVLNGTRNEFHRLEDQG 248

Query: 244 IKAPCKGGETGDDCSSASSVTMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWPCP 303
           IKAPCKGGETGDDCSSASSVT+SSS EEGARR PQEPQM NINGF PQIPYLPGVPWPC 
Sbjct: 249 IKAPCKGGETGDDCSSASSVTVSSSTEEGARRCPQEPQMQNINGF-PQIPYLPGVPWPCT 308

Query: 304 WNSPIPPPAFCPPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHSRD 363
           WN+P+PPPAF PPGVPLSFYPA YWSC++PGAWN+PWF+P PC PN+GP S  LGKHSRD
Sbjct: 309 WNAPLPPPAFYPPGVPLSFYPATYWSCSVPGAWNVPWFSPHPCSPNSGPISPILGKHSRD 368

Query: 364 SGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKV 423
             KLQADNS  E PPKQKNGS+LVPKTLRIDDPNEAAKSSIWETLGIKNDS KAV+L K+
Sbjct: 369 GDKLQADNSGREEPPKQKNGSVLVPKTLRIDDPNEAAKSSIWETLGIKNDSTKAVNLSKI 428

Query: 424 FQSKTNQKSNASEVLSLVLQANPAALSRSLNFHERS 455
           FQSK  QK++ SEVLS VLQANPAA SRSL FHE S
Sbjct: 429 FQSKGGQKNSVSEVLSPVLQANPAAFSRSLTFHEHS 458

[Close]

BLAST of Sed0023411 vs. TAIR 10
Match: AT3G47500.1 (cycling DOF factor 3 )

HSP 1 Score: 330.5 bits (846), Expect = 2.1e-90
Identity = 226/468 (48.29%), Postives = 274/468 (58.55%), Query Frame = 0


Query: 4   IKIFGKEIPLLVDVEVPSIQTDDSDSSYAKEKDAVLGKPTDSSAAKEVTLHDSEDSMCVQ 63
           IK+FG +IP     E      DD +  ++   D    K T         L D  ++ C  
Sbjct: 10  IKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSPEKVTPE-------LSDKNNNNCND 69

Query: 64  TASEVHMNSEVLSVDE---NDKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKSMETK 123
            +   +   E L  +E    D++E+S T ++        + LKKP KILPCPRCKSMETK
Sbjct: 70  NSFN-NSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETK 129

Query: 124 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSAAHYRHITISEALQAA 183
           FCYYNNYN+NQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK+S++HYRHITISEAL+AA
Sbjct: 130 FCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISEALEAA 189

Query: 184 QIDVPNGVNHLASTSNGRVLNFSVNAP---VCGSMATVPNPAE-RKVLNGTRNEFQRLED 243
           ++D           +N RVL+F + A    V   M  V    E +KV NG RN F  L D
Sbjct: 190 RLDP-------GLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNRFHGLAD 249

Query: 244 QVIKAPCKGGETGDDCSSASSVTMSS--SMEEGARRHPQ--EPQM-----LNINGFPPQI 303
           Q + A     E GDDCSS SSVT S+  S++E   +     E QM      N+NG+    
Sbjct: 250 QRLVARV---ENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNNMNGY---- 309

Query: 304 PYLPGVPWPCPWNSPIPPPAFC-PPGVPLSFYPAPYWSCTIPGAWNIPWFTPQPCPPNTG 363
             +PGVPWP  WN  +PPP F  PPG P+ FY  PYW+  +           Q C     
Sbjct: 310 ACIPGVPWPYTWNPAMPPPGFYPPPGYPMPFY--PYWTIPMLPPHQSSSPISQKCSNTNS 369

Query: 364 PSSSALGKHSRDSGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAKSSIWETLGIK 423
           P+   LGKH RD G  + DN E ER  KQK G +LVPKTLRIDDPNEAAKSSIW TLGIK
Sbjct: 370 PT---LGKHPRDEGSSKKDN-ETER--KQKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIK 429

Query: 424 NDSI-KAVDLCKVFQSKTNQKSNASEVLSLVLQANPAALSRSLNFHER 454
           N+++ KA  + K F  KT   +N     S VL ANPAALSRS NFHE+
Sbjct: 430 NEAMCKAGGMFKGFDHKTKMYNNDKAENSPVLSANPAALSRSHNFHEQ 447

[Close]

BLAST of Sed0023411 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-71
Identity = 206/502 (41.04%), Postives = 261/502 (51.99%), Query Frame = 0


Query: 4   IKIFGKEIPL---------------LVDVEVP-----SIQTDDSDSSYAKEKDAVLGKPT 63
           IK+FGK IPL               L + ++P     S   DD D       D+ LG+  
Sbjct: 6   IKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMG---DSGLGREE 65

Query: 64  -----DSSAAKEVTLHDSEDSMCVQTASEVHMNSEVLS----VDENDKLEASQTKKEQTD 123
                D     E    + +DS C + +     N    +     ++ +  +A++T +E   
Sbjct: 66  GDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGG 125

Query: 124 APESKE-KLKKPDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVP 183
              S+E KLKKPDKILPCPRC SMETKFCYYNNYNVNQPRHFCK CQRYWTAGGTMRNVP
Sbjct: 126 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 185

Query: 184 VGAGRRKNKNSAAHY-RHITI--SEALQ-AAQIDV--PNGVNHLASTSNGRVLNFSVNAP 243
           VGAGRRKNK+ A+HY RH++I  +EA+Q  A+ D+  PNG N         +L F  ++ 
Sbjct: 186 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGAN---------LLTFGSDSV 245

Query: 244 VCGSMATVPNPAERKVLNGTRNEFQRLEDQVIKAPCKGGETGDDCSSASSVTMSSSMEEG 303
           +C SMA+  N  E+ +L             V++ P +G +         +V ++ + EE 
Sbjct: 246 LCESMASGLNLVEKSLLK---------TQTVLQEPNEGLKI--------TVPLNQTNEEA 305

Query: 304 ARRHPQEPQMLNINGFPPQIPYLPGVP--WPCPWNSPIPPPAFCPPGVPLSFYPAP-YWS 363
               P            P++P  PG P  WP  WN              L FYP P YWS
Sbjct: 306 GTVSPL-----------PKVPCFPGPPPTWPYAWNG--------VSWTILPFYPPPAYWS 365

Query: 364 C--TIPGAWNIPWFTPQP-CPPNTGPSSSALGKHSRDS-----GKLQADNSEMERPPKQK 423
           C    PGAWN   + PQP  P  + P+S  LGKHSRD      G    +   + R   + 
Sbjct: 366 CPGVSPGAWNSFTWMPQPNSPSGSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKP 425

Query: 424 NGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKVFQSKTNQKSNASE----V 455
              + VPKTLRIDDP EAAKSSIWETLGIK D  +  D    F+S T +KS+ SE     
Sbjct: 426 ERCLWVPKTLRIDDPEEAAKSSIWETLGIKKD--ENADTFGAFRSSTKEKSSLSEGRLPG 457

[Close]

BLAST of Sed0023411 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-71
Identity = 206/502 (41.04%), Postives = 261/502 (51.99%), Query Frame = 0


Query: 4   IKIFGKEIPL---------------LVDVEVP-----SIQTDDSDSSYAKEKDAVLGKPT 63
           IK+FGK IPL               L + ++P     S   DD D       D+ LG+  
Sbjct: 6   IKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMG---DSGLGREE 65

Query: 64  -----DSSAAKEVTLHDSEDSMCVQTASEVHMNSEVLS----VDENDKLEASQTKKEQTD 123
                D     E    + +DS C + +     N    +     ++ +  +A++T +E   
Sbjct: 66  GDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGG 125

Query: 124 APESKE-KLKKPDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVP 183
              S+E KLKKPDKILPCPRC SMETKFCYYNNYNVNQPRHFCK CQRYWTAGGTMRNVP
Sbjct: 126 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 185

Query: 184 VGAGRRKNKNSAAHY-RHITI--SEALQ-AAQIDV--PNGVNHLASTSNGRVLNFSVNAP 243
           VGAGRRKNK+ A+HY RH++I  +EA+Q  A+ D+  PNG N         +L F  ++ 
Sbjct: 186 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGAN---------LLTFGSDSV 245

Query: 244 VCGSMATVPNPAERKVLNGTRNEFQRLEDQVIKAPCKGGETGDDCSSASSVTMSSSMEEG 303
           +C SMA+  N  E+ +L             V++ P +G +         +V ++ + EE 
Sbjct: 246 LCESMASGLNLVEKSLLK---------TQTVLQEPNEGLKI--------TVPLNQTNEEA 305

Query: 304 ARRHPQEPQMLNINGFPPQIPYLPGVP--WPCPWNSPIPPPAFCPPGVPLSFYPAP-YWS 363
               P            P++P  PG P  WP  WN              L FYP P YWS
Sbjct: 306 GTVSPL-----------PKVPCFPGPPPTWPYAWNG--------VSWTILPFYPPPAYWS 365

Query: 364 C--TIPGAWNIPWFTPQP-CPPNTGPSSSALGKHSRDS-----GKLQADNSEMERPPKQK 423
           C    PGAWN   + PQP  P  + P+S  LGKHSRD      G    +   + R   + 
Sbjct: 366 CPGVSPGAWNSFTWMPQPNSPSGSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKP 425

Query: 424 NGSILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKVFQSKTNQKSNASE----V 455
              + VPKTLRIDDP EAAKSSIWETLGIK D  +  D    F+S T +KS+ SE     
Sbjct: 426 ERCLWVPKTLRIDDPEEAAKSSIWETLGIKKD--ENADTFGAFRSSTKEKSSLSEGRLPG 457

[Close]

BLAST of Sed0023411 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-59
Identity = 162/377 (42.97%), Postives = 194/377 (51.46%), Query Frame = 0


Query: 81  DKLEASQTKKEQTDAPESKEKLKKPDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQ 140
           D+ E     K  TD  E  + LKKP KILPCPRC SMETKFCYYNNYNVNQPRHFCKACQ
Sbjct: 26  DEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQ 85

Query: 141 RYWTAGGTMRNVPVGAGRRKNKNSA--AHYRHITISEALQAAQIDVPNGVNHLASTSNGR 200
           RYWT+GGTMR+VP+GAGRRKNKN++  +HY H+TISE                   +NG 
Sbjct: 86  RYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE-------------------TNGP 145

Query: 201 VLNFSVNAPVCGSMATVPNPAERKVLNGTRNEFQRLEDQVIKAPCKGGETGDDCSSASSV 260
           VL+FS+                                            GDD   +S+ 
Sbjct: 146 VLSFSL--------------------------------------------GDDQKVSSNR 205

Query: 261 TMSSSMEEGARRHPQEPQMLNINGFPPQIPYLPGVPWPCPWNSPIPPPAFCPPGVPLSFY 320
             +  +      + +       NG    +   PGV WP  WN     PAF P        
Sbjct: 206 FGNQKLVARIENNDERSNNNTSNG----LNCFPGVSWPYTWN-----PAFYP-------- 265

Query: 321 PAPYWSCTIPGAWNIPWFTPQPCPPNTGPSSSALGKHSRDSGKLQADNSEMERPPKQKNG 380
             PYWS  +  +           P ++ P+S+ LGKHSRD  +            KQ+NG
Sbjct: 266 VYPYWSMPVLSS-----------PVSSSPTST-LGKHSRDEDETVKQ--------KQRNG 297

Query: 381 SILVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLCKVFQSKTNQK-SNASEV-LSLV 440
           S+LVPKTLRIDDPNEAAKSSIW TLGIKN+      +   F SK   K SN  E   SLV
Sbjct: 326 SVLVPKTLRIDDPNEAAKSSIWTTLGIKNEV-----MFNGFGSKKEVKLSNKEETETSLV 297

Query: 441 LQANPAALSRSLNFHER 454
           L ANPAALSRS+NFHE+
Sbjct: 386 LCANPAALSRSINFHEQ 297

[Close]

BLAST of Sed0023411 vs. TAIR 10
Match: AT1G69570.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-39
Identity = 154/480 (32.08%), Postives = 217/480 (45.21%), Query Frame = 0


Query: 3   EIKIFGKEIPLLVDV------------EVPSIQTDDSDSSYAKEKDAVLGKPTDSSAAKE 62
           EIK+FG+ I  L+DV            +V S  + +  SS +      +G         E
Sbjct: 8   EIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIRVPVKKSE 67

Query: 63  VTLHDSEDSMCVQTASEVHMNSEVLSVDENDK------LEASQTKKEQTDAPESKEKLKK 122
              +  +D   +   +E       +S   + K       E + T    T + E    LKK
Sbjct: 68  QESNKFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGEKSTALKK 127

Query: 123 PDKILPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKN- 182
           PDK++PCPRC+S  TKFCYYNNYNVNQPR+FC+ CQRYWTAGG+MRNVPVG+GRRKNK  
Sbjct: 128 PDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGW 187

Query: 183 -SAAHYRHITISEALQAAQIDVPNGVNHLASTSNGRVLNFSVNAPVCGSMATVPNPAERK 242
            S+ HY  +T  +                 + ++G +L+F        S ++V    +  
Sbjct: 188 PSSNHYLQVTSEDC---------------DNNNSGTILSFG------SSESSVTETGKH- 247

Query: 243 VLNGTRNEFQRLEDQVIKAPCKGGETGDDCS-SASSVTMSSSMEEGARRHPQEPQMLNIN 302
                                   ++GD    SA SV+  +   +G              
Sbjct: 248 ------------------------QSGDTAKISADSVSQENKSYQGF------------- 307

Query: 303 GFPPQIPYLP--GVPWPCPWNSPIPPPAFCPPGVPLSFYPAP-YWSCTIPGAWNIPWFTP 362
             PPQ+  LP    PWP  W+         P G   SFYP P YW CT+P         P
Sbjct: 308 -LPPQV-MLPNNSSPWPYQWS---------PTGPNASFYPVPFYWGCTVP-------IYP 367

Query: 363 QPCPPNTGPSSSALGKHSRD--SGKLQADNSEMERPPKQKNGSILVPKTLRIDDPNEAAK 422
                 T  +SS LGK SRD   G++   N+ +     +     LV ++LR++   EA+K
Sbjct: 368 ------TSETSSCLGKRSRDQTEGRINDTNTTITTTRAR-----LVSESLRMN--IEASK 395

Query: 423 SSIWETLGIKND-SIKAVDLCKVFQSKTNQKSNASEVLSLV---LQANPAALSRSLNFHE 453
           S++W  L  K +   +   L   F +K N  SN S ++S     LQANPAA+SR++NF E
Sbjct: 428 SAVWSKLPTKPEKKTQGFSLFNGFDTKGN--SNRSSLVSETSHSLQANPAAMSRAMNFRE 395

The following BLAST results are available for this feature:

BLAST of Sed0023411 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134567.1	8.2e-209	81.44	cyclic dof factor 3-like [Momordica charantia]	[more]
XP_038879380.1	2.5e-205	80.92	cyclic dof factor 3 [Benincasa hispida] >XP_038879381.1 cyclic dof factor 3 [Ben...	[more]
XP_004138169.2	4.6e-204	80.61	cyclic dof factor 3 [Cucumis sativus] >KGN63675.1 hypothetical protein Csa_01423...	[more]
XP_023531924.1	5.1e-203	79.91	cyclic dof factor 3-like [Cucurbita pepo subsp. pepo]	[more]
KAG6587543.1	3.3e-202	79.69	Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0023411 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFV3	3.0e-89	48.29	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]
Q93ZL5	2.4e-70	41.04	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8W1E3	1.6e-58	42.97	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q9SEZ3	3.2e-38	32.08	Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1	[more]
Q9LQX4	1.6e-29	31.69	Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV...	[more]

BLAST of Sed0023411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZY6	4.0e-209	81.44	cyclic dof factor 3-like OS=Momordica charantia OX=3673 GN=LOC111006802 PE=4 SV=...	[more]
A0A0A0LP47	2.2e-204	80.61	AOBP (Ascorbate oxidase promoter-binding protein) OS=Cucumis sativus OX=3659 GN=...	[more]
A0A5A7UT96	1.4e-201	79.39	Cyclic dof factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G...	[more]
A0A1S3BWG5	1.4e-201	79.39	cyclic dof factor 3 OS=Cucumis melo OX=3656 GN=LOC103493996 PE=4 SV=1	[more]
A0A6J1E146	6.8e-201	80.04	cyclic dof factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429843 PE=4 SV=1	[more]

BLAST of Sed0023411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47500.1	2.1e-90	48.29	cycling DOF factor 3	[more]
AT5G39660.1	1.7e-71	41.04	cycling DOF factor 2	[more]
AT5G39660.2	1.7e-71	41.04	cycling DOF factor 2	[more]
AT5G62430.1	1.1e-59	42.97	cycling DOF factor 1	[more]
AT1G69570.1	2.3e-39	32.08	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 106..163 e-value: 4.2E-32 score: 110.1
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 111..147
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 109..163 score: 28.620991
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..372
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 3..453
None	No IPR available	PANTHER	PTHR31089:SF31	CYCLIC DOF FACTOR 1	coord: 3..453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023411.1	Sed0023411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity