Sed0023396 (gene) Chayote v1

Overview


Name	Sed0023396
Type	gene
Organism	Sechium edule (Chayote v1)
Description	rhodanese-like domain-containing protein 4A, chloroplastic
Location	LG09: 33203229 .. 33206914 (+)
RNA-Seq Expression	Sed0023396
Synteny	Sed0023396

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCAACTCTCTTCTCCTCTCTTCCTCCCCATTTCTCCATAGCTATGGCAGTTCCCACAAACCCCCTTCCCCAATTCCAAAACCCCATTTCCCTTCTCCAAAACCCATCAATTCAAAACCTCTCAGCCTCTTCCATGGCACCCAATTCCCCTCCATCACCAAAACCCCTCTCCCAAATCCCACCAATTCCTCAAACCCCAATTTCCCCCAATTCTCCAAACCCCATCTCCCCTTTGCCCTAACCCACCTCCTCCTCGCCCCGCTCCCGAGCCTCGCCGCCGAAGCCGACCAGCCCGACAAGATAAACCTGGAGTCCATCTTGCTTTCCATCGATGACTTCTTCAACAGATACCCTTTTTTCGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTTCTTCTTCAGGAAGTACAAGTTTGTCTCTGCCATTGATGCGTTTCGCAGAATTAGGGAGGACCCTAATGCTCGGCTCTTGGATGTTAGAGATGAAAAGAGTTTGGGGATTTTGGGGTCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTACTCTGAGGAGGAGGATGATGATGGGTTTGTGAAGAAGGTTAAGAAGGGATTTGGAGATGGTGCTGCTGATACTGTAGTTTTTGTGCTGGACAAGTAAGTTGTTGCCTTTTATTTCTAATGGAAAGTTGGAAATGAAAATGGGATTTGTTTGATGGGAAATTATTGTTCAGATGTTTATAAGGCCTAGTTTGATAAACATTTTGTTTTTCATTTCTTGTTTATGAAATTTGAGTTACAACAACTACCTTATTATACATTTTTCTTTATTTTGATATCTACATCTTATCTATATTTTAATAAACAACACCAAAATTTGTAAACAAAAAAAAGTAACTTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCTACTTTCTCAAGGAAATATGGATACATTGTAGGAAAGATAGAACACATGGTAGGAAATTTGAGTAGAAATAAGCTTAAATTTCATAAACAAAAAACAAAAAACCAAATGGTTATCAAATGGGGCAAGTGTTAGTTTATGTTTTGTGTAAAGCTTTTATAAGTTTTCTGATGCAGTAAGCATTCATGACTGTTAAACATTCTGATTTAGCTTTTTCTGTAATCTGCACGAAAATTGGGTTTTGATTACTGTCTTCTTATGATAGATGGACCTTTGGTTAGATTGTATCTTATCCAAAAAAAAGTGGACTTGATAATCCCTCGAATGTACAAATCCTCCACCTTTTAGGATTTAATGTTGGATGTTCAACTACCTAAGAGTTACAGAATTGTATTTACCATCTTATCTCATTGTAAACAAGGCTCAGAACCTAGCTCTAAAATGTTGTAACATTTTCATCTTATCCATGAAAATGATTTTTCGTTGCCAATAAAAAAAAAAGGCCTTTGTTTAGAATGACATTTAAGAAAGAAATTTGAGGTAAGTTTTGAGAATAGTGCTTTTGAGTGTATCCTACAAGTTTGCTTGGCAATAAAAGTAGGATAAGTGGTTGTGTGGTGCGTCTAAGTTGGTCAAGACATTCACATAACAAAAAATATTCATGAGTGTTTGGACCAACTTATATGCATCTCAAATATTCTCTCATGAGACAACTTAACTCTGCAACATTTTAATGTTAAGGAAACATTCCCTGAGTAGATGGCCTCCATATATTGAATCCATAACTTTTATTGTATGTTTCCTTGATCATTTGTTGATGAATAAATCACTTTTTTTTTATCAATTTAAAGTCCTTCAATTGTTCTTAGAGTTTTCTAAATCTTTTATTGCATAAAGAAGCTTGGAAATTTTGGCATTCTGCCAAGTTTCCCTTAACTGAGTGATTTTATTTTATTTTTTTAATGAGAAATTGAGTTTTCGTTGAAATAAATGAAATTGTCCAAAAGGAAACAAAAGTTTGCTTAACAAGAATGAAGATGTTTTCGATGGATCTAAATCATCTTGACTTGTGTTTGTCTAATTTTGTCTCAAACTCATTGAACATATTGCTAGCGATCATACACTATTATTTGAAAATTTTCATGTCTCAAGCATGTCAAATGGTTTTAATACTTAGCTACTACTTCCTAGAAGGCTTCAATGTTTCTCTGTTTCCTATTTTACTTTCTCTTGCCAAATATACAAAGTTCAATTTCATCATGTGTTGCGCTTTTAATGTCTAAGGTAGTTTCGATGGAAATTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATTAAGGATGGCGTTAGGGGCGAAAAAGGATGGTTGGTATGTGGTCTTTTGCTAATCTCCTCGTTAAAAATACTCATAGTTTTGTTGAAGCTTTAATCATGTTGCATTGTAATTTCTATTTTGATTTGTTTCTCATTCGATAAGCGTAGGAGTCGAAGAGCAGAAAATATAGCAAAATGTCGAAAGCCGAGATAATCCTTGCTCTCTTCTAATCTATGTACTATCAAAATATTCGCCTTCGACATTCTCCTTGAGATCTTTGGTGTCCATTTTCTTTTAAACTACAATCATCACATCACTCTTTCTCAAATCTGCACTTAAAAATTAGCAAAACAAGTGGTTTTCTTGTTCTAATGCCAGTTAAATCACTATTAGCGCCAAAAGCTTAAGCTGCAATAACTTTAACATTTTCTTCATATTATTAACAATCTCCCTCTGTTTTTTATTCTTCCCACATTAGCAAGCATTTTCATCATTAGGATATTTTGACTTTCATTAATCGAACAACGTCAGCAGCTTTTTCAAGTTTTCATTATCACCCTTGCTTGCTTTTGTTTTTTATTTCTGTGATTGCTCGAGCTAGCTTGCATGTGCCTCGACTACACAGGACATTATCACCCTTACTTATATATCTCTATTCCAGTTGGTATCAGTAGGGTGAAAAGGTTCATTTCTTTTCAAAACTTGACCTGAAGAATTTAGAGACCTTGGTTAGACCCTTCTCCAAATTTTGATAAAGCTTTTGTTACTTATGTTCATCCTCTTTGCAGGCCATACAGGAAAGCTTGTTACCACCTTCTGTCCACATGATCACAAAGAAAAAGGCTAAAGCTTCACAAAAGTTAGAGACTAATGGAGGAGTTGTTCAACAAAGTGGAGACAATAAGGCAATCCTATCTTCAAAATCCTCCAATGGAGAAATCCAAACATCACGGCTCCATGTCGGTGCAGCATCGGACACCAAGTCACAATCGAAAACTCAGTCAAGATCGTCCTCTCCTTATCCAAATGTACGTTCACTTTGCAAACTAATATATCTCTAAGGGTAAACTTATTTTTCATTTGTAGTTGAATGATTCGATTTTAACATTCTAAAACACTCGAAACCCTTTGAAATACCCTAAAGAAATCATCAAAAGGTTATCTTAAAGTTGCTCTAACTCGGTTAATAACTCAGTTAATAGAGAATACTTGTTTCATTACTTATGTATAAGGCTGTCCTTATCATGGTTTAGTTCTTGTATTTACTTTGGTTGTGAATTTTGTGTGTATGTGATTTACTGACTAACTCAGTTTTCTTTAAAACTGATATATGGCAGTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGGAAAGTGA

mRNA sequence

ATGGACTCCAACTCTCTTCTCCTCTCTTCCTCCCCATTTCTCCATAGCTATGGCAGTTCCCACAAACCCCCTTCCCCAATTCCAAAACCCCATTTCCCTTCTCCAAAACCCATCAATTCAAAACCTCTCAGCCTCTTCCATGGCACCCAATTCCCCTCCATCACCAAAACCCCTCTCCCAAATCCCACCAATTCCTCAAACCCCAATTTCCCCCAATTCTCCAAACCCCATCTCCCCTTTGCCCTAACCCACCTCCTCCTCGCCCCGCTCCCGAGCCTCGCCGCCGAAGCCGACCAGCCCGACAAGATAAACCTGGAGTCCATCTTGCTTTCCATCGATGACTTCTTCAACAGATACCCTTTTTTCGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTTCTTCTTCAGGAAGTACAAGTTTGTCTCTGCCATTGATGCGTTTCGCAGAATTAGGGAGGACCCTAATGCTCGGCTCTTGGATGTTAGAGATGAAAAGAGTTTGGGGATTTTGGGGTCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTACTCTGAGGAGGAGGATGATGATGGGTTTGTGAAGAAGGTTAAGAAGGGATTTGGAGATGGTGCTGCTGATACTGTAGTTTTTGTGCTGGACAATTTCGATGGAAATTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATTAAGGATGGCGTTAGGGGCGAAAAAGGATGGTTGGCCATACAGGAAAGCTTGTTACCACCTTCTGTCCACATGATCACAAAGAAAAAGGCTAAAGCTTCACAAAAGTTAGAGACTAATGGAGGAGTTGTTCAACAAAGTGGAGACAATAAGGCAATCCTATCTTCAAAATCCTCCAATGGAGAAATCCAAACATCACGGCTCCATGTCGGTGCAGCATCGGACACCAAGTCACAATCGAAAACTCAGTCAAGATCGTCCTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGGAAAGTGA

Coding sequence (CDS)

ATGGACTCCAACTCTCTTCTCCTCTCTTCCTCCCCATTTCTCCATAGCTATGGCAGTTCCCACAAACCCCCTTCCCCAATTCCAAAACCCCATTTCCCTTCTCCAAAACCCATCAATTCAAAACCTCTCAGCCTCTTCCATGGCACCCAATTCCCCTCCATCACCAAAACCCCTCTCCCAAATCCCACCAATTCCTCAAACCCCAATTTCCCCCAATTCTCCAAACCCCATCTCCCCTTTGCCCTAACCCACCTCCTCCTCGCCCCGCTCCCGAGCCTCGCCGCCGAAGCCGACCAGCCCGACAAGATAAACCTGGAGTCCATCTTGCTTTCCATCGATGACTTCTTCAACAGATACCCTTTTTTCGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTTCTTCTTCAGGAAGTACAAGTTTGTCTCTGCCATTGATGCGTTTCGCAGAATTAGGGAGGACCCTAATGCTCGGCTCTTGGATGTTAGAGATGAAAAGAGTTTGGGGATTTTGGGGTCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTACTCTGAGGAGGAGGATGATGATGGGTTTGTGAAGAAGGTTAAGAAGGGATTTGGAGATGGTGCTGCTGATACTGTAGTTTTTGTGCTGGACAATTTCGATGGAAATTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATTAAGGATGGCGTTAGGGGCGAAAAAGGATGGTTGGCCATACAGGAAAGCTTGTTACCACCTTCTGTCCACATGATCACAAAGAAAAAGGCTAAAGCTTCACAAAAGTTAGAGACTAATGGAGGAGTTGTTCAACAAAGTGGAGACAATAAGGCAATCCTATCTTCAAAATCCTCCAATGGAGAAATCCAAACATCACGGCTCCATGTCGGTGCAGCATCGGACACCAAGTCACAATCGAAAACTCAGTCAAGATCGTCCTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGGAAAGTGA

Protein sequence

MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLPNPTNSSNPNFPQFSKPHLPFALTHLLLAPLPSLAAEADQPDKINLESILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLLDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLETNGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPPSSPTPSKPGK

Homology

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BLAST of Sed0023396 vs. NCBI nr
Match: XP_038896412.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Benincasa hispida])

HSP 1 Score: 498.4 bits (1282), Expect = 5.0e-137
Identity = 281/369 (76.15%), Postives = 307/369 (83.20%), Query Frame = 0


Query: 1   MDSNSLLL-SSSPFLHSYGSSHKPPSPIPKPHFPSPKP-INSKPLSLFHGTQFPSITKTP 60
           M+S+SL L SSSPFLHS+   HK PS  P    PS  P  NSKPL++F+G  F SI KTP
Sbjct: 1   MESHSLYLSSSSPFLHSHRKIHKLPSQKPISQSPSLIPSTNSKPLTVFNGAHFSSINKTP 60

Query: 61  LPNPTNSSNPN--------FPQFSKPHLPFALTH-LLLAPLPSLAAEADQ--PDKINLES 120
            P PT  SNP+        F Q +K +LPFALT  LLL PLPS A E DQ   DKINLES
Sbjct: 61  FPTPTIPSNPHFLFAKTSPFHQLAKSYLPFALTQLLLLTPLPSFALETDQASSDKINLES 120

Query: 121 ILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLLD 180
           IL+SIDDFFNRYPFFVAGCTFIWLVGIPLIDYFF RKYKF+SAIDAFR+IR++PNA+LLD
Sbjct: 121 ILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLD 180

Query: 181 VRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNFD 240
           +RDEKSL  LGSPNLRILNKDVVQVVYS EED+DGFVKKVK  FGD  ADT+VF+LDNFD
Sbjct: 181 IRDEKSLAFLGSPNLRILNKDVVQVVYS-EEDEDGFVKKVKNSFGD-VADTLVFILDNFD 240

Query: 241 GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLETN 300
           GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHM  +KKAKASQKL TN
Sbjct: 241 GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTN 300

Query: 301 GGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPPS 357
            GVVQQ+GDNKA+ S KSSNGEIQTSRLHV A+S T++Q KT+SR SSPYPNYPDLKPPS
Sbjct: 301 -GVVQQNGDNKAVPSLKSSNGEIQTSRLHVNASSATETQLKTRSRPSSPYPNYPDLKPPS 360

[Close]

BLAST of Sed0023396 vs. NCBI nr
Match: XP_022991517.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita maxima])

HSP 1 Score: 498.0 bits (1281), Expect = 6.5e-137
Identity = 281/368 (76.36%), Postives = 301/368 (81.79%), Query Frame = 0


Query: 1   MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLP 60
           M+S+SL LSSS         HK PS  P    PS  P NSKPLS+F+GT FPSI KTP  
Sbjct: 1   MESHSLYLSSSSLF-----LHKLPSHKPISLSPSLIPFNSKPLSVFNGTHFPSINKTPFQ 60

Query: 61  NPTNSSNP------------NFPQFSKPHLPFALTHLLLAPLPSLAAEADQ--PDKINLE 120
           NPTN SNP             F Q  K HLPFALT LLL PLPSLA E DQ   DKINLE
Sbjct: 61  NPTNPSNPLRNPHFLFAKTSPFLQLVKSHLPFALTQLLLTPLPSLALETDQASSDKINLE 120

Query: 121 SILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLL 180
           SIL+SIDDFFNRYPFFVAGCTFIWLVGIPLIDY+F RKYKF+SAIDAFRRIR+DPNA+LL
Sbjct: 121 SILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLL 180

Query: 181 DVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNF 240
           D+RDEKSL  LGSPNLRILNKDVVQVVYS EED+DGFVKKVKKGFGDG ADT VFVLDNF
Sbjct: 181 DIRDEKSLAFLGSPNLRILNKDVVQVVYS-EEDEDGFVKKVKKGFGDG-ADTQVFVLDNF 240

Query: 241 DGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLET 300
           DGNSMKVAELL KNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVH+  +KKAKAS+K  T
Sbjct: 241 DGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFGT 300

Query: 301 NGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPP 355
           N GVVQQSGD +A+ S KSSNGEIQTS LHV A+SDT+S+ KT+SRSSSPYPNYPDLKPP
Sbjct: 301 N-GVVQQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360

[Close]

BLAST of Sed0023396 vs. NCBI nr
Match: KAG7014541.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.5 bits (1264), Expect = 6.1e-135
Identity = 276/368 (75.00%), Postives = 300/368 (81.52%), Query Frame = 0


Query: 1   MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLP 60
           M+S+SL LSSS         HK PS  P    PS  P NSKPLS+F+G   P+I KTP  
Sbjct: 1   MESHSLYLSSSSLF-----LHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQ 60

Query: 61  NPTNSSNP------------NFPQFSKPHLPFALTHLLLAPLPSLAAEADQ--PDKINLE 120
           NPTN S P             F Q  K HLPFALT LLL+PLPSLA E DQ   DKINLE
Sbjct: 61  NPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLE 120

Query: 121 SILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLL 180
           SIL+SIDDFFNRYPFFVAGCTFIWLVGIPLIDY+F RKYKF+SAIDAFRRIR+DPNA+LL
Sbjct: 121 SILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLL 180

Query: 181 DVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNF 240
           D+RDEKSL  LGSPNLRILNKDVVQVVYS EED+DGFVKKVKKGFGDG ADT+VFVLDNF
Sbjct: 181 DIRDEKSLAFLGSPNLRILNKDVVQVVYS-EEDEDGFVKKVKKGFGDG-ADTLVFVLDNF 240

Query: 241 DGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLET 300
           DGNSMKVAELL KNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVH+  +KKAKAS+K  T
Sbjct: 241 DGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGT 300

Query: 301 NGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPP 355
           N GVVQQSGD +A+ S KSSNGEIQTS LHV A+SDT+S+ KT+SRSSSPYPNYPDLKPP
Sbjct: 301 N-GVVQQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360

[Close]

BLAST of Sed0023396 vs. NCBI nr
Match: KAG6576020.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 485.7 bits (1249), Expect = 3.4e-133
Identity = 275/371 (74.12%), Postives = 300/371 (80.86%), Query Frame = 0


Query: 1   MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLP 60
           M+S+SL LSSS         HK PS  P    PS  P NSKPLS+F+G   P+I KTP  
Sbjct: 1   MESHSLYLSSSSLF-----LHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQ 60

Query: 61  NPTNSSNP------------NFPQFSKPHLPFALTHLLLAPLPSLAAEADQ--PDKINLE 120
           NPTN S P             F Q  K HLPFALT LLL+PLPSLA E DQ   DKINLE
Sbjct: 61  NPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLE 120

Query: 121 SILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLL 180
           SIL+SIDDFFNRYPFFVAGCTFIWLVGIPLIDY+F RKYKF+SAIDAFRRIR+DPNA+LL
Sbjct: 121 SILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLL 180

Query: 181 DVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGF---VKKVKKGFGDGAADTVVFVL 240
           D+RDEKSL  LGSPNLRILNKDVVQVVYS EED+DGF   VKKVKKGFGDG ADT+VFVL
Sbjct: 181 DIRDEKSLAFLGSPNLRILNKDVVQVVYS-EEDEDGFVKKVKKVKKGFGDG-ADTLVFVL 240

Query: 241 DNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQK 300
           DNFDGNSMKVAELL KNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVH+  +KKAKAS+K
Sbjct: 241 DNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKK 300

Query: 301 LETNGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDL 355
             TN GVVQQSGD +A+ S KSSNGE+QTS LHV A+SDT+S+ KT+SRSSSPYPNYPDL
Sbjct: 301 FGTN-GVVQQSGDKEAVPSLKSSNGEVQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDL 360

[Close]

BLAST of Sed0023396 vs. NCBI nr
Match: XP_022954032.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita moschata])

HSP 1 Score: 484.6 bits (1246), Expect = 7.5e-133
Identity = 273/368 (74.18%), Postives = 298/368 (80.98%), Query Frame = 0


Query: 1   MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLP 60
           M+S+SL LSSS         HK PS  P    PS  P NSKPLS+F+G   P+I KTP  
Sbjct: 1   MESHSLYLSSSSLF-----LHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQ 60

Query: 61  NPTNSSNP------------NFPQFSKPHLPFALTHLLLAPLPSLAAEADQ--PDKINLE 120
           NPTN S P             F Q  K HLPFALT LLL+PLPSLA E DQ   DKINLE
Sbjct: 61  NPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLE 120

Query: 121 SILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLL 180
           SIL+SIDDFFNRYPFFVAGCTFIWLVGIPLIDY+F RKYKF+SAIDAFRRIR+DPNA+LL
Sbjct: 121 SILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLL 180

Query: 181 DVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNF 240
           D+RDEKSL  LGSPNLRILNKDVVQVVYS EED+DGFVKKVKKGFGDG ADT+VFVLDNF
Sbjct: 181 DIRDEKSLAFLGSPNLRILNKDVVQVVYS-EEDEDGFVKKVKKGFGDG-ADTLVFVLDNF 240

Query: 241 DGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLET 300
           DGNSMKVAELL KNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVH+  +KKAKAS+K  T
Sbjct: 241 DGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGT 300

Query: 301 NGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPP 355
           N GVVQ+S D +A+ S  SSNGEIQTS LHV A+SDT+S+ KT+SRSSSPYPNYPDLKPP
Sbjct: 301 N-GVVQKSVDKEAVPSLNSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360

[Close]

BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: Q56XR7 (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4A PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.1e-57
Identity = 123/242 (50.83%), Postives = 167/242 (69.01%), Query Frame = 0


Query: 53  SITKTPLPNPTNSSNPNFPQFSKPHLPFALTHLLLAPLPSLAAEA-------DQPDKINL 112
           S ++ P P   ++  P     +K +L   ++ L++   P LA+E+           KI+L
Sbjct: 21  STSQIPKPIQNSTKQPPIHLLTKTNLSVTISQLIITS-PVLASESFDSISSDPSSGKIDL 80

Query: 113 ESILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARL 172
           ESIL++ID+FFN+YPFFVAGCTF +LV  P +  F+ RKYK +SA++AFR+++ + +++L
Sbjct: 81  ESILVTIDNFFNKYPFFVAGCTFTYLVVYPAV-MFYLRKYKPISAMNAFRKLKNESDSQL 140

Query: 173 LDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDN 232
           LD+RD K+L +L SPNL+ L K  VQV +S E D++GF+ KVK  F D A +TVV VLDN
Sbjct: 141 LDIRDVKTLALLASPNLKFLGKSSVQVPFS-ENDEEGFLTKVKGSFSD-AENTVVCVLDN 200

Query: 233 FDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLE 288
           FDGNS KVAELL+KNGFKEAY I+ G RG+ GWLAIQE LLPP VHM T K  K+S   E
Sbjct: 201 FDGNSSKVAELLIKNGFKEAYYIRGGARGKNGWLAIQEELLPPPVHMYTAKNVKSSNNNE 258

[Close]

BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: Q9M158 (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-19
Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 106 ESILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRK----YKFVSAIDAFRRIREDP 165
           + ++  I +F    P  +AG   +  + +P +      K    +   SA +A+ ++  D 
Sbjct: 89  DGLIEGISNFVTDNPLVIAG--GVAALAVPFVLSQVLNKKPKSWGVESAKNAYTKLGTDD 148

Query: 166 NARLLDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVF 225
           NA+LLD+R       +GSPN++ L K  V  VY+  ED  GF+KK+   F D   +T ++
Sbjct: 149 NAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYN-GEDKPGFLKKLSLKFKD-PENTTLY 208

Query: 226 VLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKA- 285
           +LD FDGNS  VAEL+  NGFK AYAIKDG  G +GWL    S LP     I  KK  + 
Sbjct: 209 ILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL---NSSLP----WIEPKKTLSL 268

Query: 286 --SQKLETNGGVVQQSGDNKAI 301
             S   ++  GV  +S D  ++
Sbjct: 269 DLSSLTDSISGVFGESSDGVSV 279

HSP 2 Score: 38.5 bits (88), Expect = 1.9e-01
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 321 SDTKSQSKTQSRSSSPYPNYPDLKPPSSPTPSKP 355
           ++T+++ K  SR  SPY +YPDLKPPSSP PS+P
Sbjct: 433 TETEAKPKPHSRPLSPYASYPDLKPPSSPMPSQP 466

[Close]

BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: A2X345 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=TROL PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.5e-19
Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 143 RKYKFVSAIDAFRRIREDPNARLLDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDG 202
           + Y  VSA  A+R + E+P A+L+D+R        G+P+LR   K    V Y + ED +G
Sbjct: 124 KPYGVVSAAAAYRALVEEPGAQLVDIRPPGDARQSGAPDLREAKKKAAAVPY-DGEDKNG 183

Query: 203 FVKKVKKGFGDGAADTVVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLA 261
           F+KK+   F D   +T + +LD FDGNS  VAEL+  NG+K A+A+KDG  G +GWL+
Sbjct: 184 FLKKLSLRFKD-PENTTLVILDKFDGNSELVAELVTANGYKAAFAVKDGAEGRRGWLS 239

HSP 2 Score: 38.9 bits (89), Expect = 1.4e-01
Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 0


Query: 332 RSSSPYPNYPDLKPPSSPTPSKP 355
           R  SPYPNYPDLKPPSSP+PS P
Sbjct: 454 RPLSPYPNYPDLKPPSSPSPSAP 476

[Close]

BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: Q6ETQ7 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TROL PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.5e-19
Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 143 RKYKFVSAIDAFRRIREDPNARLLDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDG 202
           + Y  VSA  A+R + E+P A+L+D+R        G+P+LR   K    V Y + ED +G
Sbjct: 126 KPYGVVSAAAAYRALVEEPGAQLVDIRPPGDARQSGAPDLREAKKKAAAVPY-DGEDKNG 185

Query: 203 FVKKVKKGFGDGAADTVVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLA 261
           F+KK+   F D   +T + +LD FDGNS  VAEL+  NG+K A+A+KDG  G +GWL+
Sbjct: 186 FLKKLSLRFKD-PENTTLVILDKFDGNSELVAELVTANGYKAAFAVKDGAEGRRGWLS 241

HSP 2 Score: 38.9 bits (89), Expect = 1.4e-01
Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 0


Query: 332 RSSSPYPNYPDLKPPSSPTPSKP 355
           R  SPYPNYPDLKPPSSP+PS P
Sbjct: 456 RPLSPYPNYPDLKPPSSPSPSAP 478

[Close]

BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A6J1JM16 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488109 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.2e-137
Identity = 281/368 (76.36%), Postives = 301/368 (81.79%), Query Frame = 0


Query: 1   MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLP 60
           M+S+SL LSSS         HK PS  P    PS  P NSKPLS+F+GT FPSI KTP  
Sbjct: 1   MESHSLYLSSSSLF-----LHKLPSHKPISLSPSLIPFNSKPLSVFNGTHFPSINKTPFQ 60

Query: 61  NPTNSSNP------------NFPQFSKPHLPFALTHLLLAPLPSLAAEADQ--PDKINLE 120
           NPTN SNP             F Q  K HLPFALT LLL PLPSLA E DQ   DKINLE
Sbjct: 61  NPTNPSNPLRNPHFLFAKTSPFLQLVKSHLPFALTQLLLTPLPSLALETDQASSDKINLE 120

Query: 121 SILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLL 180
           SIL+SIDDFFNRYPFFVAGCTFIWLVGIPLIDY+F RKYKF+SAIDAFRRIR+DPNA+LL
Sbjct: 121 SILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLL 180

Query: 181 DVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNF 240
           D+RDEKSL  LGSPNLRILNKDVVQVVYS EED+DGFVKKVKKGFGDG ADT VFVLDNF
Sbjct: 181 DIRDEKSLAFLGSPNLRILNKDVVQVVYS-EEDEDGFVKKVKKGFGDG-ADTQVFVLDNF 240

Query: 241 DGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLET 300
           DGNSMKVAELL KNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVH+  +KKAKAS+K  T
Sbjct: 241 DGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFGT 300

Query: 301 NGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPP 355
           N GVVQQSGD +A+ S KSSNGEIQTS LHV A+SDT+S+ KT+SRSSSPYPNYPDLKPP
Sbjct: 301 N-GVVQQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360

[Close]

BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A6J1GPW4 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456414 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 3.6e-133
Identity = 273/368 (74.18%), Postives = 298/368 (80.98%), Query Frame = 0


Query: 1   MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLP 60
           M+S+SL LSSS         HK PS  P    PS  P NSKPLS+F+G   P+I KTP  
Sbjct: 1   MESHSLYLSSSSLF-----LHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQ 60

Query: 61  NPTNSSNP------------NFPQFSKPHLPFALTHLLLAPLPSLAAEADQ--PDKINLE 120
           NPTN S P             F Q  K HLPFALT LLL+PLPSLA E DQ   DKINLE
Sbjct: 61  NPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLE 120

Query: 121 SILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLL 180
           SIL+SIDDFFNRYPFFVAGCTFIWLVGIPLIDY+F RKYKF+SAIDAFRRIR+DPNA+LL
Sbjct: 121 SILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLL 180

Query: 181 DVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNF 240
           D+RDEKSL  LGSPNLRILNKDVVQVVYS EED+DGFVKKVKKGFGDG ADT+VFVLDNF
Sbjct: 181 DIRDEKSLAFLGSPNLRILNKDVVQVVYS-EEDEDGFVKKVKKGFGDG-ADTLVFVLDNF 240

Query: 241 DGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLET 300
           DGNSMKVAELL KNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVH+  +KKAKAS+K  T
Sbjct: 241 DGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGT 300

Query: 301 NGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPP 355
           N GVVQ+S D +A+ S  SSNGEIQTS LHV A+SDT+S+ KT+SRSSSPYPNYPDLKPP
Sbjct: 301 N-GVVQKSVDKEAVPSLNSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360

[Close]

BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A5D3B9W6 (Rhodanese-like domain-containing protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00060 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.5e-128
Identity = 267/368 (72.55%), Postives = 298/368 (80.98%), Query Frame = 0


Query: 1   MDSNSLLL-SSSPFLHSYGSSHKPPSPIPKPHFPSPKPI-NSKPLSLFHGTQFPSITKTP 60
           M+S+SL L SSSPFL S+ + HK  S  P    PS  P  NSKPL++F+G  F SI +T 
Sbjct: 1   MESHSLYLSSSSPFLSSHRTIHKLSSEKPISRPPSLIPFANSKPLTVFNGPHFSSINRTS 60

Query: 61  LPNPTNSSNPNF--------PQFSKPHLPFALTH-LLLAPLPSLAAEAD--QPDKINLES 120
            P+PT  SNP F         Q +KPH PFALT  LLL PLPS A E D    DKINLES
Sbjct: 61  FPSPTIPSNPRFLFAKTSPILQLTKPHFPFALTQLLLLTPLPSFALETDLASSDKINLES 120

Query: 121 ILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLLD 180
           IL+SID+FFNRYPFFVAGCTFIWLV IPLIDY+F RKYKF+SAIDAFR+IR++PNA+LLD
Sbjct: 121 ILVSIDEFFNRYPFFVAGCTFIWLVVIPLIDYYFIRKYKFISAIDAFRKIRDEPNAQLLD 180

Query: 181 VRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNFD 240
           VR+EKSL +LGSPNLRILNKDVV+VVYS EED+DGFVKKVKK FGD  ADT+VFVLDNFD
Sbjct: 181 VREEKSLAVLGSPNLRILNKDVVRVVYS-EEDEDGFVKKVKKSFGD-CADTIVFVLDNFD 240

Query: 241 GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLETN 300
           GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHM  +KK KASQKL TN
Sbjct: 241 GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASQKLGTN 300

Query: 301 GGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPPS 356
            GVVQQ+GDN+ + S KSSN EIQ S++HV A+S  +SQ KT SR SSPYPNYPDLKPPS
Sbjct: 301 -GVVQQNGDNETVPSLKSSNREIQPSQVHVNASSPAESQLKTWSRPSSPYPNYPDLKPPS 360

[Close]

BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A1S3C7N8 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497630 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.5e-128
Identity = 267/368 (72.55%), Postives = 298/368 (80.98%), Query Frame = 0


Query: 1   MDSNSLLL-SSSPFLHSYGSSHKPPSPIPKPHFPSPKPI-NSKPLSLFHGTQFPSITKTP 60
           M+S+SL L SSSPFL S+ + HK  S  P    PS  P  NSKPL++F+G  F SI +T 
Sbjct: 1   MESHSLYLSSSSPFLSSHRTIHKLSSEKPISRPPSLIPFANSKPLTVFNGPHFSSINRTS 60

Query: 61  LPNPTNSSNPNF--------PQFSKPHLPFALTH-LLLAPLPSLAAEAD--QPDKINLES 120
            P+PT  SNP F         Q +KPH PFALT  LLL PLPS A E D    DKINLES
Sbjct: 61  FPSPTIPSNPRFLFAKTSPILQLTKPHFPFALTQLLLLTPLPSFALETDLASSDKINLES 120

Query: 121 ILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLLD 180
           IL+SID+FFNRYPFFVAGCTFIWLV IPLIDY+F RKYKF+SAIDAFR+IR++PNA+LLD
Sbjct: 121 ILVSIDEFFNRYPFFVAGCTFIWLVVIPLIDYYFIRKYKFISAIDAFRKIRDEPNAQLLD 180

Query: 181 VRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNFD 240
           VR+EKSL +LGSPNLRILNKDVV+VVYS EED+DGFVKKVKK FGD  ADT+VFVLDNFD
Sbjct: 181 VREEKSLAVLGSPNLRILNKDVVRVVYS-EEDEDGFVKKVKKSFGD-CADTIVFVLDNFD 240

Query: 241 GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLETN 300
           GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHM  +KK KASQKL TN
Sbjct: 241 GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASQKLGTN 300

Query: 301 GGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPPS 356
            GVVQQ+GDN+ + S KSSN EIQ S++HV A+S  +SQ KT SR SSPYPNYPDLKPPS
Sbjct: 301 -GVVQQNGDNETVPSLKSSNREIQPSQVHVNASSPAESQLKTWSRPSSPYPNYPDLKPPS 360

[Close]

BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A0A0K8H6 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368730 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.6e-125
Identity = 264/369 (71.54%), Postives = 296/369 (80.22%), Query Frame = 0


Query: 1   MDSNSLLL-SSSPFLHSYGSSHKPPSPIPKPHFPSPKPI-NSKPLSLFHGTQFPSITKTP 60
           M+S+SL L SSSP L S+ + HK  S  P    PS  P  NSKPL++F+G +F SI +TP
Sbjct: 1   MESHSLYLSSSSPSLQSHRAIHKLSSQKPISPPPSLIPFANSKPLTVFNGPRFSSINRTP 60

Query: 61  LPNPTNSSNP--------NFPQFSKPHLPFALTH-LLLAPLPSLAAEAD--QPDKINLES 120
            P+PT  SNP         F Q  KPH PFALT  LLL PLPS A E D    DKI+LES
Sbjct: 61  FPSPTIPSNPPFLFAKTSPFLQLMKPHFPFALTQLLLLTPLPSFALETDLASSDKISLES 120

Query: 121 ILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLLD 180
           IL+SID+FFNRYPFFVAGCTFIWLV IP IDY+F RKYKF+SAI+AFR+IR++PNA+LLD
Sbjct: 121 ILVSIDEFFNRYPFFVAGCTFIWLVVIPSIDYYFIRKYKFISAINAFRKIRDEPNAQLLD 180

Query: 181 VRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNFD 240
           VR+EKSL +LGSPNLRILNKDVV+VVYS EED+DGFVKKVKK FGD  ADT+VFVLDNFD
Sbjct: 181 VREEKSLAVLGSPNLRILNKDVVRVVYS-EEDEDGFVKKVKKSFGDD-ADTIVFVLDNFD 240

Query: 241 GNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLETN 300
           GNSMK AELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHM  +KK KAS KL TN
Sbjct: 241 GNSMKAAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASPKLGTN 300

Query: 301 GGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPPS 357
            GVVQQ+GDN+A+ S KSSN EIQ S +HV A+S  +SQ KTQSR SSPYPNYPDLKPPS
Sbjct: 301 -GVVQQNGDNEAVPSLKSSNREIQPSHVHVNASSPAESQLKTQSRPSSPYPNYPDLKPPS 360

[Close]

BLAST of Sed0023396 vs. TAIR 10
Match: AT3G25480.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 2.9e-58
Identity = 123/242 (50.83%), Postives = 167/242 (69.01%), Query Frame = 0


Query: 53  SITKTPLPNPTNSSNPNFPQFSKPHLPFALTHLLLAPLPSLAAEA-------DQPDKINL 112
           S ++ P P   ++  P     +K +L   ++ L++   P LA+E+           KI+L
Sbjct: 21  STSQIPKPIQNSTKQPPIHLLTKTNLSVTISQLIITS-PVLASESFDSISSDPSSGKIDL 80

Query: 113 ESILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARL 172
           ESIL++ID+FFN+YPFFVAGCTF +LV  P +  F+ RKYK +SA++AFR+++ + +++L
Sbjct: 81  ESILVTIDNFFNKYPFFVAGCTFTYLVVYPAV-MFYLRKYKPISAMNAFRKLKNESDSQL 140

Query: 173 LDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDN 232
           LD+RD K+L +L SPNL+ L K  VQV +S E D++GF+ KVK  F D A +TVV VLDN
Sbjct: 141 LDIRDVKTLALLASPNLKFLGKSSVQVPFS-ENDEEGFLTKVKGSFSD-AENTVVCVLDN 200

Query: 233 FDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLE 288
           FDGNS KVAELL+KNGFKEAY I+ G RG+ GWLAIQE LLPP VHM T K  K+S   E
Sbjct: 201 FDGNSSKVAELLIKNGFKEAYYIRGGARGKNGWLAIQEELLPPPVHMYTAKNVKSSNNNE 258

[Close]

BLAST of Sed0023396 vs. TAIR 10
Match: AT4G01050.1 (thylakoid rhodanese-like )

HSP 1 Score: 99.0 bits (245), Expect = 8.2e-21
Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 106 ESILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRK----YKFVSAIDAFRRIREDP 165
           + ++  I +F    P  +AG   +  + +P +      K    +   SA +A+ ++  D 
Sbjct: 89  DGLIEGISNFVTDNPLVIAG--GVAALAVPFVLSQVLNKKPKSWGVESAKNAYTKLGTDD 148

Query: 166 NARLLDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVF 225
           NA+LLD+R       +GSPN++ L K  V  VY+  ED  GF+KK+   F D   +T ++
Sbjct: 149 NAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYN-GEDKPGFLKKLSLKFKD-PENTTLY 208

Query: 226 VLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKA- 285
           +LD FDGNS  VAEL+  NGFK AYAIKDG  G +GWL    S LP     I  KK  + 
Sbjct: 209 ILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL---NSSLP----WIEPKKTLSL 268

Query: 286 --SQKLETNGGVVQQSGDNKAI 301
             S   ++  GV  +S D  ++
Sbjct: 269 DLSSLTDSISGVFGESSDGVSV 279

HSP 2 Score: 38.5 bits (88), Expect = 1.3e-02
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 321 SDTKSQSKTQSRSSSPYPNYPDLKPPSSPTPSKP 355
           ++T+++ K  SR  SPY +YPDLKPPSSP PS+P
Sbjct: 433 TETEAKPKPHSRPLSPYASYPDLKPPSSPMPSQP 466

The following BLAST results are available for this feature:

BLAST of Sed0023396 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896412.1	5.0e-137	76.15	rhodanese-like domain-containing protein 4A, chloroplastic [Benincasa hispida]	[more]
XP_022991517.1	6.5e-137	76.36	rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita maxima]	[more]
KAG7014541.1	6.1e-135	75.00	Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita a...	[more]
KAG6576020.1	3.4e-133	74.12	Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita a...	[more]
XP_022954032.1	7.5e-133	74.18	rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita moschata]	[more]

BLAST of Sed0023396 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XR7	4.1e-57	50.83	Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thalia...	[more]
Q9M158	1.2e-19	35.64	Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thalian...	[more]
A2X345	7.5e-19	43.22	Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX...	[more]
Q6ETQ7	7.5e-19	43.22	Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica ...	[more]

BLAST of Sed0023396 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JM16	3.2e-137	76.36	rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita maxima O...	[more]
A0A6J1GPW4	3.6e-133	74.18	rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita moschata...	[more]
A0A5D3B9W6	3.5e-128	72.55	Rhodanese-like domain-containing protein 4A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C7N8	3.5e-128	72.55	rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucumis melo OX=36...	[more]
A0A0A0K8H6	1.6e-125	71.54	Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368730 P...	[more]

BLAST of Sed0023396 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25480.1	2.9e-58	50.83	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT4G01050.1	8.2e-21	35.64	thylakoid rhodanese-like	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 144..272 e-value: 1.3E-26 score: 95.0
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 131..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..356
None	No IPR available	PANTHER	PTHR47377:SF3	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4A, CHLOROPLASTIC	coord: 23..355
IPR044240	Rhodanese-like domain-containing protein STR4-like	PANTHER	PTHR47377	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 23..355
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 159..263 score: 9.01711

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023396.1	Sed0023396.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane