Sed0023396 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCCAACTCTCTTCTCCTCTCTTCCTCCCCATTTCTCCATAGCTATGGCAGTTCCCACAAACCCCCTTCCCCAATTCCAAAACCCCATTTCCCTTCTCCAAAACCCATCAATTCAAAACCTCTCAGCCTCTTCCATGGCACCCAATTCCCCTCCATCACCAAAACCCCTCTCCCAAATCCCACCAATTCCTCAAACCCCAATTTCCCCCAATTCTCCAAACCCCATCTCCCCTTTGCCCTAACCCACCTCCTCCTCGCCCCGCTCCCGAGCCTCGCCGCCGAAGCCGACCAGCCCGACAAGATAAACCTGGAGTCCATCTTGCTTTCCATCGATGACTTCTTCAACAGATACCCTTTTTTCGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTTCTTCTTCAGGAAGTACAAGTTTGTCTCTGCCATTGATGCGTTTCGCAGAATTAGGGAGGACCCTAATGCTCGGCTCTTGGATGTTAGAGATGAAAAGAGTTTGGGGATTTTGGGGTCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTACTCTGAGGAGGAGGATGATGATGGGTTTGTGAAGAAGGTTAAGAAGGGATTTGGAGATGGTGCTGCTGATACTGTAGTTTTTGTGCTGGACAAGTAAGTTGTTGCCTTTTATTTCTAATGGAAAGTTGGAAATGAAAATGGGATTTGTTTGATGGGAAATTATTGTTCAGATGTTTATAAGGCCTAGTTTGATAAACATTTTGTTTTTCATTTCTTGTTTATGAAATTTGAGTTACAACAACTACCTTATTATACATTTTTCTTTATTTTGATATCTACATCTTATCTATATTTTAATAAACAACACCAAAATTTGTAAACAAAAAAAAGTAACTTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCTACTTTCTCAAGGAAATATGGATACATTGTAGGAAAGATAGAACACATGGTAGGAAATTTGAGTAGAAATAAGCTTAAATTTCATAAACAAAAAACAAAAAACCAAATGGTTATCAAATGGGGCAAGTGTTAGTTTATGTTTTGTGTAAAGCTTTTATAAGTTTTCTGATGCAGTAAGCATTCATGACTGTTAAACATTCTGATTTAGCTTTTTCTGTAATCTGCACGAAAATTGGGTTTTGATTACTGTCTTCTTATGATAGATGGACCTTTGGTTAGATTGTATCTTATCCAAAAAAAAGTGGACTTGATAATCCCTCGAATGTACAAATCCTCCACCTTTTAGGATTTAATGTTGGATGTTCAACTACCTAAGAGTTACAGAATTGTATTTACCATCTTATCTCATTGTAAACAAGGCTCAGAACCTAGCTCTAAAATGTTGTAACATTTTCATCTTATCCATGAAAATGATTTTTCGTTGCCAATAAAAAAAAAAGGCCTTTGTTTAGAATGACATTTAAGAAAGAAATTTGAGGTAAGTTTTGAGAATAGTGCTTTTGAGTGTATCCTACAAGTTTGCTTGGCAATAAAAGTAGGATAAGTGGTTGTGTGGTGCGTCTAAGTTGGTCAAGACATTCACATAACAAAAAATATTCATGAGTGTTTGGACCAACTTATATGCATCTCAAATATTCTCTCATGAGACAACTTAACTCTGCAACATTTTAATGTTAAGGAAACATTCCCTGAGTAGATGGCCTCCATATATTGAATCCATAACTTTTATTGTATGTTTCCTTGATCATTTGTTGATGAATAAATCACTTTTTTTTTATCAATTTAAAGTCCTTCAATTGTTCTTAGAGTTTTCTAAATCTTTTATTGCATAAAGAAGCTTGGAAATTTTGGCATTCTGCCAAGTTTCCCTTAACTGAGTGATTTTATTTTATTTTTTTAATGAGAAATTGAGTTTTCGTTGAAATAAATGAAATTGTCCAAAAGGAAACAAAAGTTTGCTTAACAAGAATGAAGATGTTTTCGATGGATCTAAATCATCTTGACTTGTGTTTGTCTAATTTTGTCTCAAACTCATTGAACATATTGCTAGCGATCATACACTATTATTTGAAAATTTTCATGTCTCAAGCATGTCAAATGGTTTTAATACTTAGCTACTACTTCCTAGAAGGCTTCAATGTTTCTCTGTTTCCTATTTTACTTTCTCTTGCCAAATATACAAAGTTCAATTTCATCATGTGTTGCGCTTTTAATGTCTAAGGTAGTTTCGATGGAAATTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATTAAGGATGGCGTTAGGGGCGAAAAAGGATGGTTGGTATGTGGTCTTTTGCTAATCTCCTCGTTAAAAATACTCATAGTTTTGTTGAAGCTTTAATCATGTTGCATTGTAATTTCTATTTTGATTTGTTTCTCATTCGATAAGCGTAGGAGTCGAAGAGCAGAAAATATAGCAAAATGTCGAAAGCCGAGATAATCCTTGCTCTCTTCTAATCTATGTACTATCAAAATATTCGCCTTCGACATTCTCCTTGAGATCTTTGGTGTCCATTTTCTTTTAAACTACAATCATCACATCACTCTTTCTCAAATCTGCACTTAAAAATTAGCAAAACAAGTGGTTTTCTTGTTCTAATGCCAGTTAAATCACTATTAGCGCCAAAAGCTTAAGCTGCAATAACTTTAACATTTTCTTCATATTATTAACAATCTCCCTCTGTTTTTTATTCTTCCCACATTAGCAAGCATTTTCATCATTAGGATATTTTGACTTTCATTAATCGAACAACGTCAGCAGCTTTTTCAAGTTTTCATTATCACCCTTGCTTGCTTTTGTTTTTTATTTCTGTGATTGCTCGAGCTAGCTTGCATGTGCCTCGACTACACAGGACATTATCACCCTTACTTATATATCTCTATTCCAGTTGGTATCAGTAGGGTGAAAAGGTTCATTTCTTTTCAAAACTTGACCTGAAGAATTTAGAGACCTTGGTTAGACCCTTCTCCAAATTTTGATAAAGCTTTTGTTACTTATGTTCATCCTCTTTGCAGGCCATACAGGAAAGCTTGTTACCACCTTCTGTCCACATGATCACAAAGAAAAAGGCTAAAGCTTCACAAAAGTTAGAGACTAATGGAGGAGTTGTTCAACAAAGTGGAGACAATAAGGCAATCCTATCTTCAAAATCCTCCAATGGAGAAATCCAAACATCACGGCTCCATGTCGGTGCAGCATCGGACACCAAGTCACAATCGAAAACTCAGTCAAGATCGTCCTCTCCTTATCCAAATGTACGTTCACTTTGCAAACTAATATATCTCTAAGGGTAAACTTATTTTTCATTTGTAGTTGAATGATTCGATTTTAACATTCTAAAACACTCGAAACCCTTTGAAATACCCTAAAGAAATCATCAAAAGGTTATCTTAAAGTTGCTCTAACTCGGTTAATAACTCAGTTAATAGAGAATACTTGTTTCATTACTTATGTATAAGGCTGTCCTTATCATGGTTTAGTTCTTGTATTTACTTTGGTTGTGAATTTTGTGTGTATGTGATTTACTGACTAACTCAGTTTTCTTTAAAACTGATATATGGCAGTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGGAAAGTGA ATGGACTCCAACTCTCTTCTCCTCTCTTCCTCCCCATTTCTCCATAGCTATGGCAGTTCCCACAAACCCCCTTCCCCAATTCCAAAACCCCATTTCCCTTCTCCAAAACCCATCAATTCAAAACCTCTCAGCCTCTTCCATGGCACCCAATTCCCCTCCATCACCAAAACCCCTCTCCCAAATCCCACCAATTCCTCAAACCCCAATTTCCCCCAATTCTCCAAACCCCATCTCCCCTTTGCCCTAACCCACCTCCTCCTCGCCCCGCTCCCGAGCCTCGCCGCCGAAGCCGACCAGCCCGACAAGATAAACCTGGAGTCCATCTTGCTTTCCATCGATGACTTCTTCAACAGATACCCTTTTTTCGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTTCTTCTTCAGGAAGTACAAGTTTGTCTCTGCCATTGATGCGTTTCGCAGAATTAGGGAGGACCCTAATGCTCGGCTCTTGGATGTTAGAGATGAAAAGAGTTTGGGGATTTTGGGGTCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTACTCTGAGGAGGAGGATGATGATGGGTTTGTGAAGAAGGTTAAGAAGGGATTTGGAGATGGTGCTGCTGATACTGTAGTTTTTGTGCTGGACAATTTCGATGGAAATTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATTAAGGATGGCGTTAGGGGCGAAAAAGGATGGTTGGCCATACAGGAAAGCTTGTTACCACCTTCTGTCCACATGATCACAAAGAAAAAGGCTAAAGCTTCACAAAAGTTAGAGACTAATGGAGGAGTTGTTCAACAAAGTGGAGACAATAAGGCAATCCTATCTTCAAAATCCTCCAATGGAGAAATCCAAACATCACGGCTCCATGTCGGTGCAGCATCGGACACCAAGTCACAATCGAAAACTCAGTCAAGATCGTCCTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGGAAAGTGA ATGGACTCCAACTCTCTTCTCCTCTCTTCCTCCCCATTTCTCCATAGCTATGGCAGTTCCCACAAACCCCCTTCCCCAATTCCAAAACCCCATTTCCCTTCTCCAAAACCCATCAATTCAAAACCTCTCAGCCTCTTCCATGGCACCCAATTCCCCTCCATCACCAAAACCCCTCTCCCAAATCCCACCAATTCCTCAAACCCCAATTTCCCCCAATTCTCCAAACCCCATCTCCCCTTTGCCCTAACCCACCTCCTCCTCGCCCCGCTCCCGAGCCTCGCCGCCGAAGCCGACCAGCCCGACAAGATAAACCTGGAGTCCATCTTGCTTTCCATCGATGACTTCTTCAACAGATACCCTTTTTTCGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTTCTTCTTCAGGAAGTACAAGTTTGTCTCTGCCATTGATGCGTTTCGCAGAATTAGGGAGGACCCTAATGCTCGGCTCTTGGATGTTAGAGATGAAAAGAGTTTGGGGATTTTGGGGTCTCCTAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTACTCTGAGGAGGAGGATGATGATGGGTTTGTGAAGAAGGTTAAGAAGGGATTTGGAGATGGTGCTGCTGATACTGTAGTTTTTGTGCTGGACAATTTCGATGGAAATTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATTAAGGATGGCGTTAGGGGCGAAAAAGGATGGTTGGCCATACAGGAAAGCTTGTTACCACCTTCTGTCCACATGATCACAAAGAAAAAGGCTAAAGCTTCACAAAAGTTAGAGACTAATGGAGGAGTTGTTCAACAAAGTGGAGACAATAAGGCAATCCTATCTTCAAAATCCTCCAATGGAGAAATCCAAACATCACGGCTCCATGTCGGTGCAGCATCGGACACCAAGTCACAATCGAAAACTCAGTCAAGATCGTCCTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGGAAAGTGA MDSNSLLLSSSPFLHSYGSSHKPPSPIPKPHFPSPKPINSKPLSLFHGTQFPSITKTPLPNPTNSSNPNFPQFSKPHLPFALTHLLLAPLPSLAAEADQPDKINLESILLSIDDFFNRYPFFVAGCTFIWLVGIPLIDYFFFRKYKFVSAIDAFRRIREDPNARLLDVRDEKSLGILGSPNLRILNKDVVQVVYSEEEDDDGFVKKVKKGFGDGAADTVVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMITKKKAKASQKLETNGGVVQQSGDNKAILSSKSSNGEIQTSRLHVGAASDTKSQSKTQSRSSSPYPNYPDLKPPSSPTPSKPGK Homology
BLAST of Sed0023396 vs. NCBI nr
Match: XP_038896412.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Benincasa hispida]) HSP 1 Score: 498.4 bits (1282), Expect = 5.0e-137 Identity = 281/369 (76.15%), Postives = 307/369 (83.20%), Query Frame = 0
BLAST of Sed0023396 vs. NCBI nr
Match: XP_022991517.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita maxima]) HSP 1 Score: 498.0 bits (1281), Expect = 6.5e-137 Identity = 281/368 (76.36%), Postives = 301/368 (81.79%), Query Frame = 0
BLAST of Sed0023396 vs. NCBI nr
Match: KAG7014541.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 491.5 bits (1264), Expect = 6.1e-135 Identity = 276/368 (75.00%), Postives = 300/368 (81.52%), Query Frame = 0
BLAST of Sed0023396 vs. NCBI nr
Match: KAG6576020.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 485.7 bits (1249), Expect = 3.4e-133 Identity = 275/371 (74.12%), Postives = 300/371 (80.86%), Query Frame = 0
BLAST of Sed0023396 vs. NCBI nr
Match: XP_022954032.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita moschata]) HSP 1 Score: 484.6 bits (1246), Expect = 7.5e-133 Identity = 273/368 (74.18%), Postives = 298/368 (80.98%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: Q56XR7 (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4A PE=2 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 4.1e-57 Identity = 123/242 (50.83%), Postives = 167/242 (69.01%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: Q9M158 (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4 PE=1 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 1.2e-19 Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 0
HSP 2 Score: 38.5 bits (88), Expect = 1.9e-01 Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: A2X345 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=TROL PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.5e-19 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0
HSP 2 Score: 38.9 bits (89), Expect = 1.4e-01 Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy Swiss-Prot
Match: Q6ETQ7 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TROL PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.5e-19 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0
HSP 2 Score: 38.9 bits (89), Expect = 1.4e-01 Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A6J1JM16 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488109 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 3.2e-137 Identity = 281/368 (76.36%), Postives = 301/368 (81.79%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A6J1GPW4 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456414 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.6e-133 Identity = 273/368 (74.18%), Postives = 298/368 (80.98%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A5D3B9W6 (Rhodanese-like domain-containing protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00060 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 3.5e-128 Identity = 267/368 (72.55%), Postives = 298/368 (80.98%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A1S3C7N8 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497630 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 3.5e-128 Identity = 267/368 (72.55%), Postives = 298/368 (80.98%), Query Frame = 0
BLAST of Sed0023396 vs. ExPASy TrEMBL
Match: A0A0A0K8H6 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368730 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 1.6e-125 Identity = 264/369 (71.54%), Postives = 296/369 (80.22%), Query Frame = 0
BLAST of Sed0023396 vs. TAIR 10
Match: AT3G25480.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 223.4 bits (568), Expect = 2.9e-58 Identity = 123/242 (50.83%), Postives = 167/242 (69.01%), Query Frame = 0
BLAST of Sed0023396 vs. TAIR 10
Match: AT4G01050.1 (thylakoid rhodanese-like ) HSP 1 Score: 99.0 bits (245), Expect = 8.2e-21 Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 0
HSP 2 Score: 38.5 bits (88), Expect = 1.3e-02 Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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