Homology
BLAST of Sed0023345 vs. NCBI nr
Match:
XP_022927876.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 980.7 bits (2534), Expect = 5.3e-282
Identity = 500/588 (85.03%), Postives = 522/588 (88.78%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRRARTPILIS F KVRS LPS F F+ GNQT+TLIK L TSATPNDFSNF P
Sbjct: 1 MASLMAVRRARTPILISFFLKVRSSLPSRFIFSCGNQTETLIKALCTSATPNDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
PP QQ SS DPR+L GQWGSP Q+ QNRDYVQQG+ NNQMN+RS+N
Sbjct: 61 PPPQQHSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVQQGSSNNQMNYRSEN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGFSRQGQGYSQAGNPNSWN N QYQNPPQ N Q+FNYQQQRGPNQWNNQ
Sbjct: 121 QSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVELLKEGVKA 240
NQGYPQFGRP Q NPQVENS Q NNQA N VS DELRRFC EGKIKEAVELLKEGVKA
Sbjct: 181 NQGYPQFGRPGQGNPQVENSYQLNNQAPNPSVSPIDELRRFCEEGKIKEAVELLKEGVKA 240
Query: 241 DADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVF 300
DADCF VLF+LCGKS SF+NAKVVHDYFLQSTCRSD+QLNNKVLEMYGKCGSMSDARRVF
Sbjct: 241 DADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVF 300
Query: 301 DHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVE 360
DHM DRNIDSWHLMIKGYA+NGLGDEGLELFE ++KLGLQPNSQTFLFVM ACASASA+E
Sbjct: 301 DHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIE 360
Query: 361 EGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNY 420
EGFMYFESMKNDYQI PD+DHYLGLLGVLGEPGH+NEAF+Y +KLPMEPTVE+WETLKNY
Sbjct: 361 EGFMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYGEKLPMEPTVEVWETLKNY 420
Query: 421 ARIHGDVDLEDYAEELIVDLDPTK-VSSNKLPTPPPKKRSAISMLDGKNRIIEFRNPTLY 480
ARIHGDVDLEDYAEELIVDLDPTK SS K+PTPPPK+RSAISMLDGKNRI EFRNPTLY
Sbjct: 421 ARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLY 480
Query: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR
Sbjct: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
Query: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
BLAST of Sed0023345 vs. NCBI nr
Match:
KAG6588655.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 975.3 bits (2520), Expect = 2.2e-280
Identity = 496/588 (84.35%), Postives = 522/588 (88.78%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRRARTPILIS FFKVRS LPS FTF+ GNQT+TLIK L TSATPNDFSNF
Sbjct: 1 MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNF--- 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
PP QQ SS DPR+ GQWGSP Q+ QNRDYV QG+ NNQM++RS+N
Sbjct: 61 PPPQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSEN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGFSRQGQGYSQAGNPNSWN N QYQNPPQ N Q+FNYQQQRGPNQWNNQ
Sbjct: 121 QSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVELLKEGVKA 240
NQGYPQFGRP Q NPQVENS + NNQA N VS DELRRFC EGK+KEAVELLKEGVKA
Sbjct: 181 NQGYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKA 240
Query: 241 DADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVF 300
DADCF VLF+LCGKS SF+NAKVVHDYFLQSTCRSD+QLNNKVLEMYGKCGSMSDARRVF
Sbjct: 241 DADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVF 300
Query: 301 DHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVE 360
DHM DRNIDSWHLMIKGYA+NGLGDEGLELFE ++KLGLQPNSQTFLFVM ACASASA+E
Sbjct: 301 DHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIE 360
Query: 361 EGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNY 420
EGFMYF+SMKNDYQI PD+DHYLGLLGVLGEPGH+NEAF+YV+KLPMEPTVE+WETLKNY
Sbjct: 361 EGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNY 420
Query: 421 ARIHGDVDLEDYAEELIVDLDPTK-VSSNKLPTPPPKKRSAISMLDGKNRIIEFRNPTLY 480
ARIHGDVDLEDYAEELIVDLDPTK SS K+PTPPPK+RSAISMLDGKNRI EFRNPTLY
Sbjct: 421 ARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLY 480
Query: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR
Sbjct: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
Query: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 585
BLAST of Sed0023345 vs. NCBI nr
Match:
KAG7013281.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 973.0 bits (2514), Expect = 1.1e-279
Identity = 495/588 (84.18%), Postives = 521/588 (88.61%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRRARTPILIS FFKVRS LPS FTF+ GNQT+TLIK L TSATPNDF NF
Sbjct: 1 MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF--- 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
PP QQ SS DPR+ GQWGSP Q+ QNRDYV QG+ NNQM++RS+N
Sbjct: 61 PPPQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSEN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGFSRQGQGYSQAGNPNSWN N QYQNPPQ N Q+FNYQQQRGPNQWNNQ
Sbjct: 121 QSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVELLKEGVKA 240
NQGYPQFGRP Q NPQVENS + NNQA N VS DELRRFC EGK+KEAVELLKEGVKA
Sbjct: 181 NQGYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKA 240
Query: 241 DADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVF 300
DADCF VLF+LCGKS SF+NAKVVHDYFLQSTCRSD+QLNNKVLEMYGKCGSMSDARRVF
Sbjct: 241 DADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVF 300
Query: 301 DHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVE 360
DHM DRNIDSWHLMIKGYA+NGLGDEGLELFE ++KLGLQPNSQTFLFVM ACASASA+E
Sbjct: 301 DHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIE 360
Query: 361 EGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNY 420
EGFMYF+SMKNDYQI PD+DHYLGLLGVLGEPGH+NEAF+YV+KLPMEPTVE+WETLKNY
Sbjct: 361 EGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNY 420
Query: 421 ARIHGDVDLEDYAEELIVDLDPTK-VSSNKLPTPPPKKRSAISMLDGKNRIIEFRNPTLY 480
ARIHGDVDLEDYAEELIVDLDPTK SS K+PTPPPK+RSAISMLDGKNRI EFRNPTLY
Sbjct: 421 ARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLY 480
Query: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR
Sbjct: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
Query: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 585
BLAST of Sed0023345 vs. NCBI nr
Match:
XP_023530084.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 969.5 bits (2505), Expect = 1.2e-278
Identity = 500/599 (83.47%), Postives = 522/599 (87.15%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRRARTPILIS FFKVRS LPS FTF+ GNQT+TLIK L TSATPNDFSNF P
Sbjct: 1 MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
PP QQRSS DPR+L GQWGSP Q+ QNRDYV QG+ NNQMN+RS+N
Sbjct: 61 PPPQQRSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMNYRSEN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGFSRQGQGYSQAGNPNSWN N QYQNPPQ N Q+FNYQQQR PNQWNNQ
Sbjct: 121 QSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRSPNQWNNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAA-----------NSLVSSADELRRFCGEGKIKE 240
NQGYPQFGRP Q NPQVENS Q NNQA N VS DELRRFC EGKIKE
Sbjct: 181 NQGYPQFGRPGQGNPQVENSYQLNNQAGVQGHGSQNQALNPSVSPTDELRRFCEEGKIKE 240
Query: 241 AVELLKEGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGK 300
AVELLKEGVKADADCF VLF+LCGKS SF+NAKVVHDYFLQST RSD+QLNNKVLEMYGK
Sbjct: 241 AVELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTYRSDLQLNNKVLEMYGK 300
Query: 301 CGSMSDARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFV 360
CGSMSDARRVFDHM DRNIDSWHLMIKGYA+NGLGDEGLELFE +KKLGLQPNSQTFL+V
Sbjct: 301 CGSMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMKKLGLQPNSQTFLYV 360
Query: 361 MSACASASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEP 420
M ACASASA+EEGFMYFESMK+DYQI PD+DHYLGLLGVLGEPGH+NEAF+YV+KLPMEP
Sbjct: 361 MRACASASAIEEGFMYFESMKSDYQINPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEP 420
Query: 421 TVEIWETLKNYARIHGDVDLEDYAEELIVDLDPTK-VSSNKLPTPPPKKRSAISMLDGKN 480
TVEIWETLKNYARIHGDVDLEDYAEELIVDL PTK SS K+PTPPPK+RSAISMLDGKN
Sbjct: 421 TVEIWETLKNYARIHGDVDLEDYAEELIVDLGPTKAASSKKIPTPPPKRRSAISMLDGKN 480
Query: 481 RIIEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 540
RI EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG
Sbjct: 481 RISEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 540
Query: 541 LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 597
BLAST of Sed0023345 vs. NCBI nr
Match:
XP_022952757.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 966.1 bits (2496), Expect = 1.3e-277
Identity = 493/598 (82.44%), Postives = 520/598 (86.96%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRR RTPI ISSF KVRSPLPSTFTF+ GN+T+TLIK L+TSA P+DFSNF P
Sbjct: 1 MASLMAVRRVRTPIHISSFIKVRSPLPSTFTFSCGNRTETLIKALSTSAFPDDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
P QQ SS DPRYL GQWGSP Q+ QNRDYVQQG+P+NQMN+RSQN
Sbjct: 61 TPPQQPSSSDPRYLQGQWGSPSQVHRPSGNFNNQSFSEFQNRDYVQQGSPSNQMNYRSQN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGF RQGQ Y+Q GNPNSWN N QYQNP Q N QNFNYQQQR PNQW+NQ
Sbjct: 121 QSSYPNPGFPRQGQSYTQGGNPNSWNPPNQSYPQYQNPSQPNPQNFNYQQQRAPNQWSNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAA-----------NSLVSSADELRRFCGEGKIKE 240
NQG PQFG+P QRN Q ENS Q NNQA N+LVS DELRRFCGEGK+KE
Sbjct: 181 NQGLPQFGKPGQRNLQAENSYQLNNQAGIQGHGAQNHTPNALVSPIDELRRFCGEGKLKE 240
Query: 241 AVELLKEGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGK 300
AVELLKEGVKADADCF FELCGKSKSFENAKVVHDYFLQSTCRSD+QLNNKVLEMYGK
Sbjct: 241 AVELLKEGVKADADCFHEFFELCGKSKSFENAKVVHDYFLQSTCRSDLQLNNKVLEMYGK 300
Query: 301 CGSMSDARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFV 360
CGSMSDA+RVFDHM DR+I+SWHLMIKGYADNGLGDEGLELFE +KKLGL PNSQTFLFV
Sbjct: 301 CGSMSDAQRVFDHMLDRSIESWHLMIKGYADNGLGDEGLELFENMKKLGLHPNSQTFLFV 360
Query: 361 MSACASASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEP 420
MSACASASAVEEGFMYFESMKNDY I PDMDHYLGLLG+LGEPGH+NEAF+YV+KLPMEP
Sbjct: 361 MSACASASAVEEGFMYFESMKNDYHINPDMDHYLGLLGILGEPGHINEAFEYVEKLPMEP 420
Query: 421 TVEIWETLKNYARIHGDVDLEDYAEELIVDLDPTKVSSNKLPTPPPKKRSAISMLDGKNR 480
TVE+WETLKNYARIHGDVDLEDYAEELIVDLDPTK +SNK+PTPPPKKR AISMLDGKNR
Sbjct: 421 TVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASNKIPTPPPKKRFAISMLDGKNR 480
Query: 481 IIEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 540
I+EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL
Sbjct: 481 IVEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 540
Query: 541 ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 596
BLAST of Sed0023345 vs. ExPASy Swiss-Prot
Match:
Q9ZQE5 (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)
HSP 1 Score: 509.6 bits (1311), Expect = 4.5e-143
Identity = 300/595 (50.42%), Postives = 376/595 (63.19%), Query Frame = 0
Query: 1 MVSLMAVRRARTP--ILISSFFKVRSPLP---STFTFNGGNQTQTLIKTLTTSATPNDF- 60
M SLMA+R ART + I S ++RS P S F F+ G IK L+TSA ND+
Sbjct: 1 MSSLMAIRCARTQNIVTIGSLLQLRSSFPRLSSQFHFS-GTLNSIPIKHLSTSAAANDYH 60
Query: 61 -SNFSPPPPQQQRSSPDPRY--------------LHGQWGSP--GQIQNRDYVQQGNPNN 120
+ S P Q QR P + QW + GQI Q G N
Sbjct: 61 QNPQSGSPSQHQRPYPPQSFDSQNQTNTNQRVPQSPNQWSTQHGGQIP-----QYGGQNP 120
Query: 121 QMNHRSQNHNPGFSRQGQGYSQAG--NPNSWNSQNQY--QNP----PQSNTQNFNYQQQR 180
Q + + +QG SQ G NP + QY Q P P +N QN N QQ
Sbjct: 121 QHGGQRPPYGGQNPQQGGQMSQYGGHNPQHGGHRPQYGGQRPQYGGPGNNYQNQNVQQSN 180
Query: 181 GPNQWNNQNQGYPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVE 240
+ Q Q PQ R ++P NQ N A S +E+ R C K+A+E
Sbjct: 181 QSQYYTPQQQQQPQPPRSSNQSP-----NQMNEVAP---PPSVEEVMRLCQRRLYKDAIE 240
Query: 241 LLKEGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGS 300
LL +G D +CF +LFE C KS E++K VHD+FLQS R D +LNN V+ M+G+C S
Sbjct: 241 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 300
Query: 301 MSDARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSA 360
++DA+RVFDHM D+++DSWHLM+ Y+DNG+GD+ L LFE + K GL+PN +TFL V A
Sbjct: 301 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 360
Query: 361 CASASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVE 420
CA+ +EE F++F+SMKN++ I+P +HYLG+LGVLG+ GHL EA Y+ LP EPT +
Sbjct: 361 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTAD 420
Query: 421 IWETLKNYARIHGDVDLEDYAEELIVDLDPTKVSSNKLPTPPPKKRSAISMLDGKNRIIE 480
WE ++NYAR+HGD+DLEDY EEL+VD+DP+K NK+PTPPPK +M+ K+RI+E
Sbjct: 421 FWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILE 480
Query: 481 FRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 540
FRN T YKD+ K A K K YVPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I T
Sbjct: 481 FRNLTFYKDEAKEMAAK--KGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICT 540
Query: 541 PARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
P R L IIKNLR+CGDCHN IKIMS+I+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 PPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
BLAST of Sed0023345 vs. ExPASy Swiss-Prot
Match:
Q680H3 (Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2)
HSP 1 Score: 313.5 bits (802), Expect = 4.7e-84
Identity = 167/410 (40.73%), Postives = 247/410 (60.24%), Query Frame = 0
Query: 181 NNQAANSLVSSAD----ELRRFCGEGKIKEAVE----LLKEGVKADADCFQVLFELCGKS 240
NN AN L D E FC GK+K+A+ L D L ++CG++
Sbjct: 208 NNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEA 267
Query: 241 KSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVFDHMSDRNIDSWHLMI 300
+ + AK VH S D+ N+ +LEMY CG ++A VF+ MS++N+++W ++I
Sbjct: 268 EGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIII 327
Query: 301 KGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVEEGFMYFESMKNDYQI 360
+ +A NG G++ +++F K+ G P+ Q F + AC V+EG ++FESM DY I
Sbjct: 328 RCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGI 387
Query: 361 TPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNYARIHGDVDLEDYAEE 420
P ++ Y+ L+ + PG L+EA ++V+++PMEP V++WETL N +R+HG+++L DY E
Sbjct: 388 APSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAE 447
Query: 421 LIVDLDPTK-----------VSSNKLPTPPPKKRSAISMLDG-KNRIIEFR--NPTLYKD 480
++ LDPT+ V ++ + KKRS I L G K+ + EFR + L ++
Sbjct: 448 VVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPEN 507
Query: 481 DEKLKALKAMK----EQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 540
DE + L+ +K E GYV +TR LHDIDQE+KE LL HSER+A A ++++ R P
Sbjct: 508 DELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKP 567
Query: 541 LRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
+IKNLR+C DCHNA+KIMS IVGRE+I RD KRFH K+G C+C DYW
Sbjct: 568 FTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
BLAST of Sed0023345 vs. ExPASy Swiss-Prot
Match:
Q9SUU7 (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 8.1e-84
Identity = 198/546 (36.26%), Postives = 304/546 (55.68%), Query Frame = 0
Query: 40 TLIKTLTTSATPNDFSNFSPPPPQQQRSSPDPRYLHGQWG---SPGQIQNRDYVQQGNPN 99
+L L+T+A F N + P SS Y++G G S G Q Y Q NP
Sbjct: 21 SLFSYLSTAALRLGFENPTNGNP-MDNSSHHIGYVNGFNGGEQSLGGFQQNSYEQSLNPV 80
Query: 100 NQMNHRSQNHNPGFSRQGQGYSQAGNPNSWNSQNQYQNPPQSNTQNFNYQQQRGPNQWNN 159
+ N ++ + G++R +Q+ ++ N +N N+Q G + +
Sbjct: 81 SGQNPTNRFYQNGYNR---------------NQSYGEHSEIINQRNQNWQSSDGCSSYGT 140
Query: 160 QNQGYPQFGRPEQRNPQVENSNQFNN-QAANSLVSSADELRRFCGEGKIKEAVELLK--- 219
G PQ EN+ N+ Q +S SS DEL C EGK+K+AVE++K
Sbjct: 141 TGNGVPQ-----------ENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWR 200
Query: 220 -EGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMS 279
EG D + +LCG +++ + AKVVH++ S SD+ N ++EMY CGS+
Sbjct: 201 NEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVE 260
Query: 280 DARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACA 339
DA VF+ M +RN+++W +I+ +A NG G++ ++ F K+ G +P+ + F + AC
Sbjct: 261 DALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACG 320
Query: 340 SASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIW 399
+ EG ++FESM +Y I P M+HY+ L+ +L EPG+L+EA +V+ MEP V++W
Sbjct: 321 VLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVES--MEPNVDLW 380
Query: 400 ETLKNYARIHGDVDLEDYAEELIVDLDPTKVSSNKLPTPPPKKRSAI------SMLDGKN 459
ETL N +R+HGD+ L D ++++ LD ++++ P K S + M G N
Sbjct: 381 ETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPN 440
Query: 460 ---RIIEFRNPTLYKDDEKLKALKAMKEQ----GYVPDTRYVLHDIDQEAKEQALLYHSE 519
R + + + ++ E ALK++KE GYVP ++ LHD+DQE+K++ L H+E
Sbjct: 441 YGIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNE 500
Query: 520 RLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 565
R A + TPAR+ +R++KNLR+C DCHNA+K+MS+IVGRELI RD KRFHH KDG C
Sbjct: 501 RFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVC 537
BLAST of Sed0023345 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 285.4 bits (729), Expect = 1.4e-75
Identity = 152/431 (35.27%), Postives = 246/431 (57.08%), Query Frame = 0
Query: 161 YPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVELLKEGVKADAD 220
Y ++G + + N+ + N+L+ A RR E ++ +L++G +
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALI--AGHARRSGTEKALELFQGMLRDGFRPSHF 265
Query: 221 CFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVFDHM 280
+ LF C + E K VH Y ++S + N +L+MY K GS+ DAR++FD +
Sbjct: 266 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 325
Query: 281 SDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVEEGF 340
+ R++ SW+ ++ YA +G G E + FE ++++G++PN +FL V++AC+ + ++EG+
Sbjct: 326 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 385
Query: 341 MYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNYARI 400
Y+E MK D I P+ HY+ ++ +LG G LN A +++++P+EPT IW+ L N R+
Sbjct: 386 HYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 445
Query: 401 HGDVDLEDYAEELIVDLDPTKVSSN---------------------KLPTPPPKKRSAIS 460
H + +L YA E + +LDP + K+ KK A S
Sbjct: 446 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 505
Query: 461 MLDGKNRIIEF-RNPTLYKDDEKL-----KALKAMKEQGYVPDTRYVLHDIDQEAKEQAL 520
++ +N I F N + E++ + L +KE GYVPDT +V+ +DQ+ +E L
Sbjct: 506 WVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNL 565
Query: 521 LYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHF 565
YHSE++A+A+ L++TP + + I KN+R+CGDCH AIK+ S++VGRE+IVRD RFHHF
Sbjct: 566 QYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHF 625
BLAST of Sed0023345 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 282.3 bits (721), Expect = 1.2e-74
Identity = 148/417 (35.49%), Postives = 231/417 (55.40%), Query Frame = 0
Query: 180 FNNQAANSLVSSADELRRFCGEGKIKEAVELLKE----GVKADADCFQVLFELCGKSKSF 239
F+ LV+ + F GK +EA+ L E G+K D L C K +
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 240 ENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVFDHMSDRNIDSWHLMIKGY 299
K VH Y ++ ++ +N +L++Y +CG + +A+ +FD M D+N SW +I G
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 300 ADNGLGDEGLELFEYIKKL-GLQPNSQTFLFVMSACASASAVEEGFMYFESMKNDYQITP 359
A NG G E +ELF+Y++ GL P TF+ ++ AC+ V+EGF YF M+ +Y+I P
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEP 358
Query: 360 DMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNYARIHGDVDLEDYAEELI 419
++H+ ++ +L G + +A++Y+ +PM+P V IW TL +HGD DL ++A I
Sbjct: 359 RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQI 418
Query: 420 VDLDPTKVSS---------------------NKLPTPPPKKRSAISMLDGKNRIIEF--- 479
+ L+P ++ KK S+++ NR+ EF
Sbjct: 419 LQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMG 478
Query: 480 --RNPTLYKDDEKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 539
+P KLK + ++ +GYVP V D+++E KE A++YHSE++AIA+ LI
Sbjct: 479 DKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLI 538
Query: 540 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
STP R+P+ ++KNLR+C DCH AIK++S++ RE++VRD RFHHFK+G CSC DYW
Sbjct: 539 STPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Sed0023345 vs. ExPASy TrEMBL
Match:
A0A6J1EIR6 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434643 PE=3 SV=1)
HSP 1 Score: 980.7 bits (2534), Expect = 2.6e-282
Identity = 500/588 (85.03%), Postives = 522/588 (88.78%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRRARTPILIS F KVRS LPS F F+ GNQT+TLIK L TSATPNDFSNF P
Sbjct: 1 MASLMAVRRARTPILISFFLKVRSSLPSRFIFSCGNQTETLIKALCTSATPNDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
PP QQ SS DPR+L GQWGSP Q+ QNRDYVQQG+ NNQMN+RS+N
Sbjct: 61 PPPQQHSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVQQGSSNNQMNYRSEN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGFSRQGQGYSQAGNPNSWN N QYQNPPQ N Q+FNYQQQRGPNQWNNQ
Sbjct: 121 QSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVELLKEGVKA 240
NQGYPQFGRP Q NPQVENS Q NNQA N VS DELRRFC EGKIKEAVELLKEGVKA
Sbjct: 181 NQGYPQFGRPGQGNPQVENSYQLNNQAPNPSVSPIDELRRFCEEGKIKEAVELLKEGVKA 240
Query: 241 DADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVF 300
DADCF VLF+LCGKS SF+NAKVVHDYFLQSTCRSD+QLNNKVLEMYGKCGSMSDARRVF
Sbjct: 241 DADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVF 300
Query: 301 DHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVE 360
DHM DRNIDSWHLMIKGYA+NGLGDEGLELFE ++KLGLQPNSQTFLFVM ACASASA+E
Sbjct: 301 DHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIE 360
Query: 361 EGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNY 420
EGFMYFESMKNDYQI PD+DHYLGLLGVLGEPGH+NEAF+Y +KLPMEPTVE+WETLKNY
Sbjct: 361 EGFMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYGEKLPMEPTVEVWETLKNY 420
Query: 421 ARIHGDVDLEDYAEELIVDLDPTK-VSSNKLPTPPPKKRSAISMLDGKNRIIEFRNPTLY 480
ARIHGDVDLEDYAEELIVDLDPTK SS K+PTPPPK+RSAISMLDGKNRI EFRNPTLY
Sbjct: 421 ARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLY 480
Query: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR
Sbjct: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
Query: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
BLAST of Sed0023345 vs. ExPASy TrEMBL
Match:
A0A6J1GL94 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111455360 PE=3 SV=1)
HSP 1 Score: 966.1 bits (2496), Expect = 6.5e-278
Identity = 493/598 (82.44%), Postives = 520/598 (86.96%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRR RTPI ISSF KVRSPLPSTFTF+ GN+T+TLIK L+TSA P+DFSNF P
Sbjct: 1 MASLMAVRRVRTPIHISSFIKVRSPLPSTFTFSCGNRTETLIKALSTSAFPDDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
P QQ SS DPRYL GQWGSP Q+ QNRDYVQQG+P+NQMN+RSQN
Sbjct: 61 TPPQQPSSSDPRYLQGQWGSPSQVHRPSGNFNNQSFSEFQNRDYVQQGSPSNQMNYRSQN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGF RQGQ Y+Q GNPNSWN N QYQNP Q N QNFNYQQQR PNQW+NQ
Sbjct: 121 QSSYPNPGFPRQGQSYTQGGNPNSWNPPNQSYPQYQNPSQPNPQNFNYQQQRAPNQWSNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAA-----------NSLVSSADELRRFCGEGKIKE 240
NQG PQFG+P QRN Q ENS Q NNQA N+LVS DELRRFCGEGK+KE
Sbjct: 181 NQGLPQFGKPGQRNLQAENSYQLNNQAGIQGHGAQNHTPNALVSPIDELRRFCGEGKLKE 240
Query: 241 AVELLKEGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGK 300
AVELLKEGVKADADCF FELCGKSKSFENAKVVHDYFLQSTCRSD+QLNNKVLEMYGK
Sbjct: 241 AVELLKEGVKADADCFHEFFELCGKSKSFENAKVVHDYFLQSTCRSDLQLNNKVLEMYGK 300
Query: 301 CGSMSDARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFV 360
CGSMSDA+RVFDHM DR+I+SWHLMIKGYADNGLGDEGLELFE +KKLGL PNSQTFLFV
Sbjct: 301 CGSMSDAQRVFDHMLDRSIESWHLMIKGYADNGLGDEGLELFENMKKLGLHPNSQTFLFV 360
Query: 361 MSACASASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEP 420
MSACASASAVEEGFMYFESMKNDY I PDMDHYLGLLG+LGEPGH+NEAF+YV+KLPMEP
Sbjct: 361 MSACASASAVEEGFMYFESMKNDYHINPDMDHYLGLLGILGEPGHINEAFEYVEKLPMEP 420
Query: 421 TVEIWETLKNYARIHGDVDLEDYAEELIVDLDPTKVSSNKLPTPPPKKRSAISMLDGKNR 480
TVE+WETLKNYARIHGDVDLEDYAEELIVDLDPTK +SNK+PTPPPKKR AISMLDGKNR
Sbjct: 421 TVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASNKIPTPPPKKRFAISMLDGKNR 480
Query: 481 IIEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 540
I+EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL
Sbjct: 481 IVEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 540
Query: 541 ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 596
BLAST of Sed0023345 vs. ExPASy TrEMBL
Match:
A0A6J1JN43 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485971 PE=3 SV=1)
HSP 1 Score: 961.4 bits (2484), Expect = 1.6e-276
Identity = 492/588 (83.67%), Postives = 517/588 (87.93%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRRARTPILIS FFKVRS LPS FTF+ GNQT+TLIK L TSATPNDFSNF P
Sbjct: 1 MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
PP QQ SS DPR+L QWGSP Q+ NRDYV QG+ NNQ+N+RS+N
Sbjct: 61 PPPQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSEN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPG SRQGQGYS AGNPNSW+ N QYQNPPQ N Q+FNYQQQRGPNQWNNQ
Sbjct: 121 QSSHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVELLKEGVKA 240
NQGYPQFGRP Q PQVENS Q NNQA N VS DELRRFC EGKIKEAVELLKEGVKA
Sbjct: 181 NQGYPQFGRPGQGKPQVENSYQLNNQALNPSVSLTDELRRFCEEGKIKEAVELLKEGVKA 240
Query: 241 DADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVF 300
DADCF VLF+LCGKS SF+NAKVVHDYFLQST RSD+QLNNKVLEMYGKCGS+SDARRVF
Sbjct: 241 DADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTYRSDLQLNNKVLEMYGKCGSISDARRVF 300
Query: 301 DHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVE 360
DHM DRNIDSWHLMI+GYA+NGLGDEGLELFE +KKLGLQPNSQTFLFVM ACASASA+E
Sbjct: 301 DHMPDRNIDSWHLMIEGYAENGLGDEGLELFESMKKLGLQPNSQTFLFVMRACASASAIE 360
Query: 361 EGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNY 420
EGFMYFESMKNDYQI PD+DHYLGLLGVLGEPGH+NEAF+YV+KLPMEPTVE+WETLKNY
Sbjct: 361 EGFMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNY 420
Query: 421 ARIHGDVDLEDYAEELIVDLDPTK-VSSNKLPTPPPKKRSAISMLDGKNRIIEFRNPTLY 480
ARIHGDVDLED AEELIVDLDPTK SS K+PTPPPK+RSAISMLDGKNRI EFRNPTLY
Sbjct: 421 ARIHGDVDLEDCAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLY 480
Query: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR
Sbjct: 481 KDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 540
Query: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
BLAST of Sed0023345 vs. ExPASy TrEMBL
Match:
A0A6J1I4R8 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111470986 PE=3 SV=1)
HSP 1 Score: 958.7 bits (2477), Expect = 1.0e-275
Identity = 491/598 (82.11%), Postives = 520/598 (86.96%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRR RTPI ISSF KVRSPLPSTFTF+ GNQT+TLIK L+TSA P+DFSNF P
Sbjct: 1 MASLMAVRRVRTPIHISSFIKVRSPLPSTFTFSCGNQTETLIKALSTSAFPDDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
P QQ SS PRYL GQ GSP Q+ QNRDYVQ G+P+NQMN+RSQN
Sbjct: 61 TPPQQPSSSHPRYLQGQRGSPSQVHRPSGNFNNQSFSEFQNRDYVQLGSPSNQMNNRSQN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPGF RQGQ Y+Q GNPNSWN N QYQNP Q N QNFNYQQQR PNQW+NQ
Sbjct: 121 QSSYPNPGFPRQGQSYTQGGNPNSWNPPNQSYPQYQNPSQPNPQNFNYQQQRAPNQWSNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAA-----------NSLVSSADELRRFCGEGKIKE 240
NQG PQFG+P QRN Q ENS Q NNQA N+LVS DELRRFCGEGK+KE
Sbjct: 181 NQGLPQFGKPGQRNLQAENSYQLNNQAGIQGHGAQNHAPNALVSPIDELRRFCGEGKLKE 240
Query: 241 AVELLKEGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGK 300
AVELLKEGVKADADCF LFELCGKSKSF+NAKVVHDYFLQSTCRSD+QLNNKVLEMYGK
Sbjct: 241 AVELLKEGVKADADCFHELFELCGKSKSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGK 300
Query: 301 CGSMSDARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFV 360
CGSMSDA+RVFDHM DR+I+SWHLMIKGYADNGLGDEGLELFE +KKLGLQPNSQTFLFV
Sbjct: 301 CGSMSDAQRVFDHMPDRSIESWHLMIKGYADNGLGDEGLELFENMKKLGLQPNSQTFLFV 360
Query: 361 MSACASASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEP 420
MSACASASAVEEGFMYFESMKNDY I PDMDHYLGLLG+LGEPGH+NEAF+YV+KLP+EP
Sbjct: 361 MSACASASAVEEGFMYFESMKNDYHINPDMDHYLGLLGILGEPGHINEAFEYVEKLPIEP 420
Query: 421 TVEIWETLKNYARIHGDVDLEDYAEELIVDLDPTKVSSNKLPTPPPKKRSAISMLDGKNR 480
TVE+WETLKNYA+IHGDVDLEDYAEELIVDLDPTK +SNK+PTPPPKKRSAISMLDGKNR
Sbjct: 421 TVEVWETLKNYAKIHGDVDLEDYAEELIVDLDPTKAASNKIPTPPPKKRSAISMLDGKNR 480
Query: 481 IIEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 540
I+EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL
Sbjct: 481 IVEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 540
Query: 541 ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 596
BLAST of Sed0023345 vs. ExPASy TrEMBL
Match:
A0A6J1JDU2 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485971 PE=3 SV=1)
HSP 1 Score: 953.4 bits (2463), Expect = 4.4e-274
Identity = 492/599 (82.14%), Postives = 517/599 (86.31%), Query Frame = 0
Query: 1 MVSLMAVRRARTPILISSFFKVRSPLPSTFTFNGGNQTQTLIKTLTTSATPNDFSNFSPP 60
M SLMAVRRARTPILIS FFKVRS LPS FTF+ GNQT+TLIK L TSATPNDFSNF P
Sbjct: 1 MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNF--P 60
Query: 61 PPQQQRSSPDPRYLHGQWGSPGQI---------------QNRDYVQQGNPNNQMNHRSQN 120
PP QQ SS DPR+L QWGSP Q+ NRDYV QG+ NNQ+N+RS+N
Sbjct: 61 PPPQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSEN 120
Query: 121 H----NPGFSRQGQGYSQAGNPNSWNSQN----QYQNPPQSNTQNFNYQQQRGPNQWNNQ 180
NPG SRQGQGYS AGNPNSW+ N QYQNPPQ N Q+FNYQQQRGPNQWNNQ
Sbjct: 121 QSSHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQ 180
Query: 181 NQGYPQFGRPEQRNPQVENSNQFNNQAA-----------NSLVSSADELRRFCGEGKIKE 240
NQGYPQFGRP Q PQVENS Q NNQA N VS DELRRFC EGKIKE
Sbjct: 181 NQGYPQFGRPGQGKPQVENSYQLNNQAGVQGHGSQNQALNPSVSLTDELRRFCEEGKIKE 240
Query: 241 AVELLKEGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGK 300
AVELLKEGVKADADCF VLF+LCGKS SF+NAKVVHDYFLQST RSD+QLNNKVLEMYGK
Sbjct: 241 AVELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTYRSDLQLNNKVLEMYGK 300
Query: 301 CGSMSDARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFV 360
CGS+SDARRVFDHM DRNIDSWHLMI+GYA+NGLGDEGLELFE +KKLGLQPNSQTFLFV
Sbjct: 301 CGSISDARRVFDHMPDRNIDSWHLMIEGYAENGLGDEGLELFESMKKLGLQPNSQTFLFV 360
Query: 361 MSACASASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEP 420
M ACASASA+EEGFMYFESMKNDYQI PD+DHYLGLLGVLGEPGH+NEAF+YV+KLPMEP
Sbjct: 361 MRACASASAIEEGFMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEP 420
Query: 421 TVEIWETLKNYARIHGDVDLEDYAEELIVDLDPTK-VSSNKLPTPPPKKRSAISMLDGKN 480
TVE+WETLKNYARIHGDVDLED AEELIVDLDPTK SS K+PTPPPK+RSAISMLDGKN
Sbjct: 421 TVEVWETLKNYARIHGDVDLEDCAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKN 480
Query: 481 RIIEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 540
RI EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG
Sbjct: 481 RISEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 540
Query: 541 LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 597
BLAST of Sed0023345 vs. TAIR 10
Match:
AT2G15690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 509.6 bits (1311), Expect = 3.2e-144
Identity = 300/595 (50.42%), Postives = 376/595 (63.19%), Query Frame = 0
Query: 1 MVSLMAVRRARTP--ILISSFFKVRSPLP---STFTFNGGNQTQTLIKTLTTSATPNDF- 60
M SLMA+R ART + I S ++RS P S F F+ G IK L+TSA ND+
Sbjct: 1 MSSLMAIRCARTQNIVTIGSLLQLRSSFPRLSSQFHFS-GTLNSIPIKHLSTSAAANDYH 60
Query: 61 -SNFSPPPPQQQRSSPDPRY--------------LHGQWGSP--GQIQNRDYVQQGNPNN 120
+ S P Q QR P + QW + GQI Q G N
Sbjct: 61 QNPQSGSPSQHQRPYPPQSFDSQNQTNTNQRVPQSPNQWSTQHGGQIP-----QYGGQNP 120
Query: 121 QMNHRSQNHNPGFSRQGQGYSQAG--NPNSWNSQNQY--QNP----PQSNTQNFNYQQQR 180
Q + + +QG SQ G NP + QY Q P P +N QN N QQ
Sbjct: 121 QHGGQRPPYGGQNPQQGGQMSQYGGHNPQHGGHRPQYGGQRPQYGGPGNNYQNQNVQQSN 180
Query: 181 GPNQWNNQNQGYPQFGRPEQRNPQVENSNQFNNQAANSLVSSADELRRFCGEGKIKEAVE 240
+ Q Q PQ R ++P NQ N A S +E+ R C K+A+E
Sbjct: 181 QSQYYTPQQQQQPQPPRSSNQSP-----NQMNEVAP---PPSVEEVMRLCQRRLYKDAIE 240
Query: 241 LLKEGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGS 300
LL +G D +CF +LFE C KS E++K VHD+FLQS R D +LNN V+ M+G+C S
Sbjct: 241 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 300
Query: 301 MSDARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSA 360
++DA+RVFDHM D+++DSWHLM+ Y+DNG+GD+ L LFE + K GL+PN +TFL V A
Sbjct: 301 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 360
Query: 361 CASASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVE 420
CA+ +EE F++F+SMKN++ I+P +HYLG+LGVLG+ GHL EA Y+ LP EPT +
Sbjct: 361 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTAD 420
Query: 421 IWETLKNYARIHGDVDLEDYAEELIVDLDPTKVSSNKLPTPPPKKRSAISMLDGKNRIIE 480
WE ++NYAR+HGD+DLEDY EEL+VD+DP+K NK+PTPPPK +M+ K+RI+E
Sbjct: 421 FWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILE 480
Query: 481 FRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 540
FRN T YKD+ K A K K YVPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I T
Sbjct: 481 FRNLTFYKDEAKEMAAK--KGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICT 540
Query: 541 PARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
P R L IIKNLR+CGDCHN IKIMS+I+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 PPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
BLAST of Sed0023345 vs. TAIR 10
Match:
AT2G25580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 313.5 bits (802), Expect = 3.4e-85
Identity = 167/410 (40.73%), Postives = 247/410 (60.24%), Query Frame = 0
Query: 181 NNQAANSLVSSAD----ELRRFCGEGKIKEAVE----LLKEGVKADADCFQVLFELCGKS 240
NN AN L D E FC GK+K+A+ L D L ++CG++
Sbjct: 208 NNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEA 267
Query: 241 KSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVFDHMSDRNIDSWHLMI 300
+ + AK VH S D+ N+ +LEMY CG ++A VF+ MS++N+++W ++I
Sbjct: 268 EGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIII 327
Query: 301 KGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACASASAVEEGFMYFESMKNDYQI 360
+ +A NG G++ +++F K+ G P+ Q F + AC V+EG ++FESM DY I
Sbjct: 328 RCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGI 387
Query: 361 TPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNYARIHGDVDLEDYAEE 420
P ++ Y+ L+ + PG L+EA ++V+++PMEP V++WETL N +R+HG+++L DY E
Sbjct: 388 APSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAE 447
Query: 421 LIVDLDPTK-----------VSSNKLPTPPPKKRSAISMLDG-KNRIIEFR--NPTLYKD 480
++ LDPT+ V ++ + KKRS I L G K+ + EFR + L ++
Sbjct: 448 VVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPEN 507
Query: 481 DEKLKALKAMK----EQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 540
DE + L+ +K E GYV +TR LHDIDQE+KE LL HSER+A A ++++ R P
Sbjct: 508 DELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKP 567
Query: 541 LRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
+IKNLR+C DCHNA+KIMS IVGRE+I RD KRFH K+G C+C DYW
Sbjct: 568 FTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
BLAST of Sed0023345 vs. TAIR 10
Match:
AT4G32450.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 312.8 bits (800), Expect = 5.7e-85
Identity = 198/546 (36.26%), Postives = 304/546 (55.68%), Query Frame = 0
Query: 40 TLIKTLTTSATPNDFSNFSPPPPQQQRSSPDPRYLHGQWG---SPGQIQNRDYVQQGNPN 99
+L L+T+A F N + P SS Y++G G S G Q Y Q NP
Sbjct: 21 SLFSYLSTAALRLGFENPTNGNP-MDNSSHHIGYVNGFNGGEQSLGGFQQNSYEQSLNPV 80
Query: 100 NQMNHRSQNHNPGFSRQGQGYSQAGNPNSWNSQNQYQNPPQSNTQNFNYQQQRGPNQWNN 159
+ N ++ + G++R +Q+ ++ N +N N+Q G + +
Sbjct: 81 SGQNPTNRFYQNGYNR---------------NQSYGEHSEIINQRNQNWQSSDGCSSYGT 140
Query: 160 QNQGYPQFGRPEQRNPQVENSNQFNN-QAANSLVSSADELRRFCGEGKIKEAVELLK--- 219
G PQ EN+ N+ Q +S SS DEL C EGK+K+AVE++K
Sbjct: 141 TGNGVPQ-----------ENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWR 200
Query: 220 -EGVKADADCFQVLFELCGKSKSFENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMS 279
EG D + +LCG +++ + AKVVH++ S SD+ N ++EMY CGS+
Sbjct: 201 NEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVE 260
Query: 280 DARRVFDHMSDRNIDSWHLMIKGYADNGLGDEGLELFEYIKKLGLQPNSQTFLFVMSACA 339
DA VF+ M +RN+++W +I+ +A NG G++ ++ F K+ G +P+ + F + AC
Sbjct: 261 DALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACG 320
Query: 340 SASAVEEGFMYFESMKNDYQITPDMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIW 399
+ EG ++FESM +Y I P M+HY+ L+ +L EPG+L+EA +V+ MEP V++W
Sbjct: 321 VLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVES--MEPNVDLW 380
Query: 400 ETLKNYARIHGDVDLEDYAEELIVDLDPTKVSSNKLPTPPPKKRSAI------SMLDGKN 459
ETL N +R+HGD+ L D ++++ LD ++++ P K S + M G N
Sbjct: 381 ETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPN 440
Query: 460 ---RIIEFRNPTLYKDDEKLKALKAMKEQ----GYVPDTRYVLHDIDQEAKEQALLYHSE 519
R + + + ++ E ALK++KE GYVP ++ LHD+DQE+K++ L H+E
Sbjct: 441 YGIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNE 500
Query: 520 RLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKC 565
R A + TPAR+ +R++KNLR+C DCHNA+K+MS+IVGRELI RD KRFHH KDG C
Sbjct: 501 RFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVC 537
BLAST of Sed0023345 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 282.3 bits (721), Expect = 8.3e-76
Identity = 148/417 (35.49%), Postives = 231/417 (55.40%), Query Frame = 0
Query: 180 FNNQAANSLVSSADELRRFCGEGKIKEAVELLKE----GVKADADCFQVLFELCGKSKSF 239
F+ LV+ + F GK +EA+ L E G+K D L C K +
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 240 ENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVFDHMSDRNIDSWHLMIKGY 299
K VH Y ++ ++ +N +L++Y +CG + +A+ +FD M D+N SW +I G
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 300 ADNGLGDEGLELFEYIKKL-GLQPNSQTFLFVMSACASASAVEEGFMYFESMKNDYQITP 359
A NG G E +ELF+Y++ GL P TF+ ++ AC+ V+EGF YF M+ +Y+I P
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEP 358
Query: 360 DMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNYARIHGDVDLEDYAEELI 419
++H+ ++ +L G + +A++Y+ +PM+P V IW TL +HGD DL ++A I
Sbjct: 359 RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQI 418
Query: 420 VDLDPTKVSS---------------------NKLPTPPPKKRSAISMLDGKNRIIEF--- 479
+ L+P ++ KK S+++ NR+ EF
Sbjct: 419 LQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMG 478
Query: 480 --RNPTLYKDDEKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 539
+P KLK + ++ +GYVP V D+++E KE A++YHSE++AIA+ LI
Sbjct: 479 DKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLI 538
Query: 540 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
STP R+P+ ++KNLR+C DCH AIK++S++ RE++VRD RFHHFK+G CSC DYW
Sbjct: 539 STPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Sed0023345 vs. TAIR 10
Match:
AT4G21065.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 282.3 bits (721), Expect = 8.3e-76
Identity = 148/417 (35.49%), Postives = 231/417 (55.40%), Query Frame = 0
Query: 180 FNNQAANSLVSSADELRRFCGEGKIKEAVELLKE----GVKADADCFQVLFELCGKSKSF 239
F+ LV+ + F GK +EA+ L E G+K D L C K +
Sbjct: 46 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 105
Query: 240 ENAKVVHDYFLQSTCRSDVQLNNKVLEMYGKCGSMSDARRVFDHMSDRNIDSWHLMIKGY 299
K VH Y ++ ++ +N +L++Y +CG + +A+ +FD M D+N SW +I G
Sbjct: 106 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 165
Query: 300 ADNGLGDEGLELFEYIKKL-GLQPNSQTFLFVMSACASASAVEEGFMYFESMKNDYQITP 359
A NG G E +ELF+Y++ GL P TF+ ++ AC+ V+EGF YF M+ +Y+I P
Sbjct: 166 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEP 225
Query: 360 DMDHYLGLLGVLGEPGHLNEAFDYVDKLPMEPTVEIWETLKNYARIHGDVDLEDYAEELI 419
++H+ ++ +L G + +A++Y+ +PM+P V IW TL +HGD DL ++A I
Sbjct: 226 RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQI 285
Query: 420 VDLDPTKVSS---------------------NKLPTPPPKKRSAISMLDGKNRIIEF--- 479
+ L+P ++ KK S+++ NR+ EF
Sbjct: 286 LQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMG 345
Query: 480 --RNPTLYKDDEKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 539
+P KLK + ++ +GYVP V D+++E KE A++YHSE++AIA+ LI
Sbjct: 346 DKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLI 405
Query: 540 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
STP R+P+ ++KNLR+C DCH AIK++S++ RE++VRD RFHHFK+G CSC DYW
Sbjct: 406 STPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022927876.1 | 5.3e-282 | 85.03 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur... | [more] |
KAG6588655.1 | 2.2e-280 | 84.35 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG7013281.1 | 1.1e-279 | 84.18 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023530084.1 | 1.2e-278 | 83.47 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur... | [more] |
XP_022952757.1 | 1.3e-277 | 82.44 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9ZQE5 | 4.5e-143 | 50.42 | Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidop... | [more] |
Q680H3 | 4.7e-84 | 40.73 | Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX... | [more] |
Q9SUU7 | 8.1e-84 | 36.26 | Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidop... | [more] |
Q9LIQ7 | 1.4e-75 | 35.27 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
A8MQA3 | 1.2e-74 | 35.49 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EIR6 | 2.6e-282 | 85.03 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc... | [more] |
A0A6J1GL94 | 6.5e-278 | 82.44 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc... | [more] |
A0A6J1JN43 | 1.6e-276 | 83.67 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor... | [more] |
A0A6J1I4R8 | 1.0e-275 | 82.11 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc... | [more] |
A0A6J1JDU2 | 4.4e-274 | 82.14 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
AT2G15690.1 | 3.2e-144 | 50.42 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G25580.1 | 3.4e-85 | 40.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G32450.1 | 5.7e-85 | 36.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21065.1 | 8.3e-76 | 35.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G21065.2 | 8.3e-76 | 35.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |