Sed0023317 (gene) Chayote v1

Overview


Name	Sed0023317
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG07: 3095946 .. 3098834 (-)
RNA-Seq Expression	Sed0023317
Synteny	Sed0023317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCATGGACGACCTAGAAGAACTTCGCGTGGAAGAAGCATTGCCATTGCTTCCTACTCAAGTTCTTCAAGAAGCTTGCGATATCAAGGTTTTTCTCTCTATACTTTTTCACTTCTCTGAACTCCTCGATTTTCAGATCTGTTTTCTGTTTGTTTCTCGGGAAAAAAACACTCCGAGAGAGAAGTTTTGCTTTCGCTTGATTTTTCTTTGCGGTTTCGTTTGTGATCATCAGGTTCGTACGAGGCAACCGCACCAGAATCACTTCCAGCGGCAACGCCGCTACGATCGTTCTCTGTTATCGCCGTCTGATCTCGCGTTTTCACCGGTACGGAATTGCATTCGGATCGCGATTTTTTTTTTATTTCGATCGTTTTTCGAGCCCTAGGTTATTACGATTCCGTGTGCCTGATTGATTTTATGATTTTGATTCGGTCGAAATTGAATTTAGAATCAGAAATCGATGTGCGGTAGTGTCTATTCTCTGCCGCACTGGAGGCAAAATCAGCCGTCTGCGGCGGAGAATTGGACGGGCGGAGGATCTGGAATGCAAGCGATTTTCCTCGATTCCGGCCGGCATTTAGGCGGCACTGGCGTATTTCTTCCTCGAGGAACAGGCGGCACTGGTTTTCAACCGAACAAGAAGCCAGGTTCGATTCTGATTCATCGTTTGGTTGATATTTCTCTGTTCAATAATTTTCGATTGATTGATTTAAAAAATGAAAAGAAAAAAAAAAACAGAAGAAGAACTCTGTATTCGTGCTTACCTGTTTCTCTCTCGCTCTGTTTTCAATCAATTCATCGAAACCGAAGAGAGAGAGAGATAGAGAGAGGAATTTGGCTTTAAATCGCACGATGTGTTCACTTTTTCGAATTTTAATCAATCAAAATAGAATATATTGATGATCTAAATTAAATAAACATAAGAAAATTGGGAACTACATGTAGTCCTCTCATCAATACATGAAATATTGATGTGTATATATATAATCATTGAACTTCACTCAATTTTAATTATCCTTTTCAAATATCTAATTTTAATTTAATAAATTTTAAAATTAGTTCTTAGGAATTTGATCTCGTTTGATGTTCGATTTTTGATTTTTTTGTTTTTAATTTTTTAAAAACAGGTTTGTTTGTTAATTAATTTTGATTTTGATTTTTAAAATATTAAAGGAATTTTTAAAATTAAGGTTTCGTTTCAGAAATTATTTTATTTTTTATTTTTTAAATTTCGAAAATCAAAAACAAAAATTCAAATGGTTATAAATGAGGCATAAATAAAATAATTTTTAAAAACTAATTTTTATGTTTTTTATGGAAAAATGTTAGGAAAGTGATAAAAACACACAAAAAAATAAAGTTTCATGTGCAAATTTGAAGTTTGTTAGATCAATGATATTTTAAAACAATTTTATTAAATATTAAAATAATAAAATTTGGTTTTTAAAAATTAGAAACCATTATCGAACGTATATTTAATTTTTAAAAAACAAAAAATCAAGAATAAGGATCAAAAGTGTGTAATTTTTATTTTTTAAAACTAAAAATAAAAAAACACAAAATAAAAAACGAATAATAAAATAATCATCAAACGAATGTTAAATTTGTATTTTAACTCATTCTTTGAATGTATTATCTTTATCCAACCCCAAATTTGTTGTGGTTATTATATCAAATGGAATTATTATAAAAAAAAAAAAAGTGATCGTATTGTTTTTTAAGATAAATAAATGCAAGCTGTAGAGGCAACAATTACCAAAAAAAGTGATTGTTTTTTTTAACATATATAAAGTGATTGGGTATTGATTATATGTCCAAATTCCTACCATATAAGGTCATATTGTAATATTTAAGATTTAGATTTTAGGCAATGTTTGGAAAATTGTGTTTCAAAACTGTTTATAATTTTTTTTTTTTGAAACAAAAACTGTTTATAATAAGGTTTGTTACAACAATAAAAAAACAAACATGTATATGTATTTATTGAAACAATCACAATACGACATATATACGTATACACAAACTATAAATATTTTTAACATAGTAAAAAAAGTAGAATTTTAATGTATTATATATTAAAATGAATTTTAGAAATTATATAGAAGTATGATTAAAAAAAAATTGTAATGAATTTTTCTTAAAAGTATTAAACTAGCTATATTTAAACATGTAAACATATTCACTACTCAGACTATTATTTGATAAACTTTTGTTTTTGGGAAAAACAAAATCTTTTTAATATTTATGCGTGTGAATATCCACAGTTGGAATCTTAATTTTGGAGTGAATTTACAAAATATGTGCAGGTTGCTCGATGATTCTTGTTCCTGCTCGTGTTGTTCAAACTCTTAATTTCGATGTACAAGCACTTGCACAAGGATTGCAAACTTCCCCCCACAAAGGTATGCTAAATATACTTCCAAATAAAAGTTTGATGTATATTTTTTCTAAAAAGTTTAATATAAAAATATCTCCGTCACCAACGGGCAAAATTGTTTTATTTTAGTTCATTTTCAAATGCAATTTTTATTTTCTTGAATGAAATATCATTTTGGCCACTTTTTATTTACTTTCACACACTCATTGTATTTTAGTCATTTTCAGGTGCTATTCGTTTTAATTCATTTTCAAATATTTTGTTTCCAATCTTTAGACAATTACAATTTAGTTTAGTATGTGTGTTAAAACTTTGCCATCGGATTAGTTTTATGTAGATTTGCAAATTGCAGATCCCAAAAGCAACCCAATAGGTGGTAGAGAATGCAACTCTGAAGTAAAAAATGAGGAGGGCAAAGATGTAACTTCAACACATTGTTCCTTCATTTCCCAAAATCAAACCAATTCATCACAAGAGATATTTCTTCCCAAGGAATGGACATATTAA

mRNA sequence

ATGGCGGCCATGGACGACCTAGAAGAACTTCGCGTGGAAGAAGCATTGCCATTGCTTCCTACTCAAGTTCTTCAAGAAGCTTGCGATATCAAGGTTCGTACGAGGCAACCGCACCAGAATCACTTCCAGCGGCAACGCCGCTACGATCGTTCTCTGTTATCGCCGTCTGATCTCGCGTTTTCACCGAATCAGAAATCGATGTGCGGTAGTGTCTATTCTCTGCCGCACTGGAGGCAAAATCAGCCGTCTGCGGCGGAGAATTGGACGGGCGGAGGATCTGGAATGCAAGCGATTTTCCTCGATTCCGGCCGGCATTTAGGCGGCACTGGCGTATTTCTTCCTCGAGGAACAGGCGGCACTGGTTTTCAACCGAACAAGAAGCCAGGTTGCTCGATGATTCTTGTTCCTGCTCGTGTTGTTCAAACTCTTAATTTCGATGTACAAGCACTTGCACAAGGATTGCAAACTTCCCCCCACAAAGATCCCAAAAGCAACCCAATAGGTGGTAGAGAATGCAACTCTGAAGTAAAAAATGAGGAGGGCAAAGATGTAACTTCAACACATTGTTCCTTCATTTCCCAAAATCAAACCAATTCATCACAAGAGATATTTCTTCCCAAGGAATGGACATATTAA

Coding sequence (CDS)

ATGGCGGCCATGGACGACCTAGAAGAACTTCGCGTGGAAGAAGCATTGCCATTGCTTCCTACTCAAGTTCTTCAAGAAGCTTGCGATATCAAGGTTCGTACGAGGCAACCGCACCAGAATCACTTCCAGCGGCAACGCCGCTACGATCGTTCTCTGTTATCGCCGTCTGATCTCGCGTTTTCACCGAATCAGAAATCGATGTGCGGTAGTGTCTATTCTCTGCCGCACTGGAGGCAAAATCAGCCGTCTGCGGCGGAGAATTGGACGGGCGGAGGATCTGGAATGCAAGCGATTTTCCTCGATTCCGGCCGGCATTTAGGCGGCACTGGCGTATTTCTTCCTCGAGGAACAGGCGGCACTGGTTTTCAACCGAACAAGAAGCCAGGTTGCTCGATGATTCTTGTTCCTGCTCGTGTTGTTCAAACTCTTAATTTCGATGTACAAGCACTTGCACAAGGATTGCAAACTTCCCCCCACAAAGATCCCAAAAGCAACCCAATAGGTGGTAGAGAATGCAACTCTGAAGTAAAAAATGAGGAGGGCAAAGATGTAACTTCAACACATTGTTCCTTCATTTCCCAAAATCAAACCAATTCATCACAAGAGATATTTCTTCCCAAGGAATGGACATATTAA

Protein sequence

MAAMDDLEELRVEEALPLLPTQVLQEACDIKVRTRQPHQNHFQRQRRYDRSLLSPSDLAFSPNQKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQPNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKDVTSTHCSFISQNQTNSSQEIFLPKEWTY

Homology

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BLAST of Sed0023317 vs. NCBI nr
Match: XP_038899697.1 (uncharacterized protein LOC120086955 isoform X1 [Benincasa hispida])

HSP 1 Score: 275.4 bits (703), Expect = 4.1e-70
Identity = 149/208 (71.63%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNHFQR----QRRYDRSLLSPSDLAFSPN 67
           +ELRVEEA+P LPTQVL EACDIKV  +Q H +H Q+     RR+DR LLSPSD + SPN
Sbjct: 4   DELRVEEAMPWLPTQVLDEACDIKVYMKQ-HHHHIQQPYFLHRRHDRPLLSPSDFSLSPN 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
           QKS   +V S PH RQ   +A  NWT GG GMQAIFLDSGR LGGTGVFLPRGTGGT +Q
Sbjct: 64  QKSKYNNVCSRPHQRQKPAAAEANWTAGGHGMQAIFLDSGRQLGGTGVFLPRGTGGTSYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ S  K+PKSN   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQAL--GLQISSRKEPKSNQ-KGRECNSIVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           VTST+CS +SQNQTNSSQEIFLPKEWTY
Sbjct: 184 VTSTNCS-MSQNQTNSSQEIFLPKEWTY 206

[Close]

BLAST of Sed0023317 vs. NCBI nr
Match: XP_022992554.1 (uncharacterized protein LOC111488842 isoform X1 [Cucurbita maxima])

HSP 1 Score: 272.7 bits (696), Expect = 2.6e-69
Identity = 145/208 (69.71%), Postives = 158/208 (75.96%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNH----FQRQRRYDRSLLSPSDLAFSPN 67
           EELRVEEA+P LP+QVL EACDIKV  RQ H        QRQR +DR LLS SD A S N
Sbjct: 4   EELRVEEAMPWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRHHDRPLLSSSDFALSSN 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
           QKS   +V SLPH RQ    +A NWT GG GMQAIFLD GR LGGTGVFLPRGTGGT +Q
Sbjct: 64  QKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGGTNYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ SP KDPK N   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQALGLGLQISPRKDPKINK-NGRECNSMVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           V   +CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 184 V---NCSFVSRNQAHSSQEIFLPKEWTY 207

[Close]

BLAST of Sed0023317 vs. NCBI nr
Match: XP_023548800.1 (uncharacterized protein LOC111807346 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-68
Identity = 147/208 (70.67%), Postives = 158/208 (75.96%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNH----FQRQRRYDRSLLSPSDLAFSPN 67
           EELRVEEALP LP+QVL EACDIKV  RQ H        QRQRR+DR LLS SD A S N
Sbjct: 4   EELRVEEALPWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRRHDRPLLSSSDFALSSN 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
           QKS   +V SLPH RQ    +A NWT GG GMQAIFLD GR LGGTGVFLPRGTGGT +Q
Sbjct: 64  QKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGGTNYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ SP KDPK N   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQAL--GLQISPRKDPKINQ-NGRECNSMVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           V    CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 184 V---KCSFVSRNQAHSSQEIFLPKEWTY 205

[Close]

BLAST of Sed0023317 vs. NCBI nr
Match: XP_022953989.1 (uncharacterized protein LOC111456382 isoform X1 [Cucurbita moschata])

HSP 1 Score: 268.1 bits (684), Expect = 6.5e-68
Identity = 146/208 (70.19%), Postives = 157/208 (75.48%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNH----FQRQRRYDRSLLSPSDLAFSPN 67
           EELRVEEALP LP+QVL EACDIKV  RQ H        QRQRR+DR LLS SD A S N
Sbjct: 4   EELRVEEALPWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRRHDRPLLSSSDFALSSN 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
           QKS   +V SLPH RQ    +A NWT GG GMQAIFLD GR LGGTGVFLPRGTG T +Q
Sbjct: 64  QKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGSTNYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ SP KDPK N   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQAL--GLQISPRKDPKINQ-NGRECNSMVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           V    CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 184 V---KCSFVSRNQAHSSQEIFLPKEWTY 205

[Close]

BLAST of Sed0023317 vs. NCBI nr
Match: XP_038899698.1 (uncharacterized protein LOC120086955 isoform X2 [Benincasa hispida])

HSP 1 Score: 266.5 bits (680), Expect = 1.9e-67
Identity = 147/208 (70.67%), Postives = 163/208 (78.37%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNHFQR----QRRYDRSLLSPSDLAFSPN 67
           +ELRVEEA+P LPTQVL EACDIKV  +Q H +H Q+     RR+DR LLSPSD + SP 
Sbjct: 4   DELRVEEAMPWLPTQVLDEACDIKVYMKQ-HHHHIQQPYFLHRRHDRPLLSPSDFSLSP- 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
            KS   +V S PH RQ   +A  NWT GG GMQAIFLDSGR LGGTGVFLPRGTGGT +Q
Sbjct: 64  -KSKYNNVCSRPHQRQKPAAAEANWTAGGHGMQAIFLDSGRQLGGTGVFLPRGTGGTSYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ S  K+PKSN   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQAL--GLQISSRKEPKSNQ-KGRECNSIVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           VTST+CS +SQNQTNSSQEIFLPKEWTY
Sbjct: 184 VTSTNCS-MSQNQTNSSQEIFLPKEWTY 204

[Close]

BLAST of Sed0023317 vs. ExPASy TrEMBL
Match: A0A6J1JXV2 (uncharacterized protein LOC111488842 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488842 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.3e-69
Identity = 145/208 (69.71%), Postives = 158/208 (75.96%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNH----FQRQRRYDRSLLSPSDLAFSPN 67
           EELRVEEA+P LP+QVL EACDIKV  RQ H        QRQR +DR LLS SD A S N
Sbjct: 4   EELRVEEAMPWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRHHDRPLLSSSDFALSSN 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
           QKS   +V SLPH RQ    +A NWT GG GMQAIFLD GR LGGTGVFLPRGTGGT +Q
Sbjct: 64  QKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGGTNYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ SP KDPK N   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQALGLGLQISPRKDPKINK-NGRECNSMVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           V   +CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 184 V---NCSFVSRNQAHSSQEIFLPKEWTY 207

[Close]

BLAST of Sed0023317 vs. ExPASy TrEMBL
Match: A0A6J1GRJ3 (uncharacterized protein LOC111456382 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456382 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.2e-68
Identity = 146/208 (70.19%), Postives = 157/208 (75.48%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNH----FQRQRRYDRSLLSPSDLAFSPN 67
           EELRVEEALP LP+QVL EACDIKV  RQ H        QRQRR+DR LLS SD A S N
Sbjct: 4   EELRVEEALPWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRRHDRPLLSSSDFALSSN 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
           QKS   +V SLPH RQ    +A NWT GG GMQAIFLD GR LGGTGVFLPRGTG T +Q
Sbjct: 64  QKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGSTNYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ SP KDPK N   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQAL--GLQISPRKDPKINQ-NGRECNSMVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           V    CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 184 V---KCSFVSRNQAHSSQEIFLPKEWTY 205

[Close]

BLAST of Sed0023317 vs. ExPASy TrEMBL
Match: A0A6J1JW11 (uncharacterized protein LOC111488842 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488842 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.0e-67
Identity = 143/208 (68.75%), Postives = 156/208 (75.00%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNH----FQRQRRYDRSLLSPSDLAFSPN 67
           EELRVEEA+P LP+QVL EACDIKV  RQ H        QRQR +DR LLS SD A S  
Sbjct: 4   EELRVEEAMPWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRHHDRPLLSSSDFALS-- 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
            KS   +V SLPH RQ    +A NWT GG GMQAIFLD GR LGGTGVFLPRGTGGT +Q
Sbjct: 64  SKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGGTNYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ SP KDPK N   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQALGLGLQISPRKDPKINK-NGRECNSMVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           V   +CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 184 V---NCSFVSRNQAHSSQEIFLPKEWTY 205

[Close]

BLAST of Sed0023317 vs. ExPASy TrEMBL
Match: A0A6J1GR68 (uncharacterized protein LOC111456382 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456382 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.5e-65
Identity = 144/208 (69.23%), Postives = 155/208 (74.52%), Query Frame = 0


Query: 8   EELRVEEALPLLPTQVLQEACDIKVRTRQPHQNH----FQRQRRYDRSLLSPSDLAFSPN 67
           EELRVEEALP LP+QVL EACDIKV  RQ H        QRQRR+DR LLS SD A S  
Sbjct: 4   EELRVEEALPWLPSQVLDEACDIKVYMRQHHHKQQPYFLQRQRRHDRPLLSSSDFALS-- 63

Query: 68  QKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGGTGFQ 127
            KS   +V SLPH RQ    +A NWT GG GMQAIFLD GR LGGTGVFLPRGTG T +Q
Sbjct: 64  SKSKFSNVSSLPHQRQKPAVSAANWTAGGHGMQAIFLDCGRQLGGTGVFLPRGTGSTNYQ 123

Query: 128 PNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKD 187
           PNKKP CSM+LVPARVVQ LN DVQAL  GLQ SP KDPK N   GRECNS VKN++GKD
Sbjct: 124 PNKKPACSMVLVPARVVQALNLDVQAL--GLQISPRKDPKINQ-NGRECNSMVKNKKGKD 183

Query: 188 VTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           V    CSF+S+NQ +SSQEIFLPKEWTY
Sbjct: 184 V---KCSFVSRNQAHSSQEIFLPKEWTY 203

[Close]

BLAST of Sed0023317 vs. ExPASy TrEMBL
Match: A0A6J1D8Z6 (uncharacterized protein LOC111018471 OS=Momordica charantia OX=3673 GN=LOC111018471 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.2e-64
Identity = 146/212 (68.87%), Postives = 161/212 (75.94%), Query Frame = 0


Query: 3   AMDDLEELRVEEALPLLPTQVLQEACDIKVRTRQPHQN-HFQRQRRYDRSLLSP--SDLA 62
           A DDL EL VEEA+P LP+QVL EACDIKV  RQ  Q  +  RQRR+DR L SP     A
Sbjct: 2   AADDL-ELAVEEAMPWLPSQVLDEACDIKVYMRQQQQKPYLHRQRRHDRPLSSPPSDHFA 61

Query: 63  FSPNQKSMCGSVYSLPHWRQNQPSAAENWTGGGSGMQAIFLDSGRHLGGTGVFLPRGTGG 122
             P+QKS  G+V + PH  Q Q SAA NWT GG GMQAIFLDSGR LGGTGVFLPRG   
Sbjct: 62  LPPHQKSKYGNVSARPH--QKQKSAA-NWTAGGPGMQAIFLDSGRQLGGTGVFLPRG-AA 121

Query: 123 TGFQPNKKPGCSMILVPARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNE 182
           TG+QPNKKP CS++L+PARVVQ LN DVQAL  G Q SP KDP  N   GRECNS VKN+
Sbjct: 122 TGYQPNKKPVCSIVLLPARVVQALNLDVQAL--GFQISPRKDPNGNQ-KGRECNSTVKNK 181

Query: 183 EGKDVTSTHCSFISQNQTNSSQEIFLPKEWTY 212
           +GKDVTST+CSF+SQNQTNSSQEIFLPKEWTY
Sbjct: 182 KGKDVTSTNCSFMSQNQTNSSQEIFLPKEWTY 205

[Close]

BLAST of Sed0023317 vs. TAIR 10
Match: AT4G02830.1 (unknown protein; Has 74 Blast hits to 74 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-09
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 87  NW--TGGGSGMQAIFL-DSGRHLGGTGVFLPRGTGGTGFQPNKKPGCSMILVPARVVQTL 146
           NW  + G   MQA FL   GR   GTGVFLP         P KK  CS +L+P RVVQ L
Sbjct: 73  NWQRSKGEDRMQAFFLVTPGRTTSGTGVFLP---ATASHPPTKKTACSPVLLPTRVVQAL 132

Query: 147 NFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKDVTSTHCSFISQNQTNSSQEI 206
           N ++     G+  SP  + + N       +S+ K+E    + +T     ++N  +S +++
Sbjct: 133 NLNIH--NNGIHISPRPEIREN-------DSKKKSEM---LATTPIKIEAENPIDSPEKL 184

Query: 207 FLPKEWTY 212
            LP+EW Y
Sbjct: 193 -LPEEWIY 184

[Close]

BLAST of Sed0023317 vs. TAIR 10
Match: AT4G02830.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-09
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 87  NW--TGGGSGMQAIFL-DSGRHLGGTGVFLPRGTGGTGFQPNKKPGCSMILVPARVVQTL 146
           NW  + G   MQA FL   GR   GTGVFLP         P KK  CS +L+P RVVQ L
Sbjct: 71  NWQRSKGEDRMQAFFLVTPGRTTSGTGVFLP---ATASHPPTKKTACSPVLLPTRVVQAL 130

Query: 147 NFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKDVTSTHCSFISQNQTNSSQEI 206
           N ++     G+  SP  + + N       +S+ K+E    + +T     ++N  +S +++
Sbjct: 131 NLNIH--NNGIHISPRPEIREN-------DSKKKSEM---LATTPIKIEAENPIDSPEKL 182

Query: 207 FLPKEWTY 212
            LP+EW Y
Sbjct: 191 -LPEEWIY 182

[Close]

BLAST of Sed0023317 vs. TAIR 10
Match: AT5G59050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 55/200 (27.50%), Postives = 87/200 (43.50%), Query Frame = 0


Query: 19  LPTQVLQEACDIKVRTRQPHQNHFQRQRRYDRSLLSPSDLAFSPNQKSMCGSVYSLPHWR 78
           +P Q  Q   D ++R+ Q +    ++++  +R            N   +     +  H  
Sbjct: 132 IPFQSKQALIDDQIRSIQANFQKIKKEKEKER----------QRNADVLGHKARNYHHLH 191

Query: 79  QNQPSAAENWTGGGSGMQAIFLD---SGRHLGGTGVFLPRGTGGTGFQPNKKPGCSMILV 138
           QNQ           SG++A+F+D   S    GGTGVFLPRG  GT  +  KK GCS +++
Sbjct: 192 QNQRPR--------SGVKAVFVDGSGSRTGSGGTGVFLPRG-HGTVVESRKKSGCSTVII 251

Query: 139 PARVVQTLNFDVQALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKDVTSTHCS--FIS 198
           PARVV+ L      L      S    P  + +     N ++K+ +   ++       +  
Sbjct: 252 PARVVEALKVHFDKLGVPSTFSSDIPPFHDALLVSMNNKKIKSNKNTSLSRVQSGSPYEM 311

Query: 199 QNQTNSSQE--IFLPKEWTY 212
           +    S QE    LP+EWTY
Sbjct: 312 EMSAESHQEPPADLPQEWTY 312

[Close]

BLAST of Sed0023317 vs. TAIR 10
Match: AT3G54000.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 41/128 (32.03%), Postives = 54/128 (42.19%), Query Frame = 0


Query: 95  MQAIFLDSGRHLG-----GTGVFLPRGTGGTG-FQPNKKPGCSMILVPARVVQTLNFDVQ 154
           M+A+F+  G H G     GTGVFLPR    T   +  +KP  S +LVPAR+ Q LN ++ 
Sbjct: 247 MRAVFI--GDHTGKRGSTGTGVFLPRSVNHTSRTETREKPTISTVLVPARLAQVLNLNLG 306

Query: 155 ALAQGLQTSPHKDPKSNPIGGRECNSEVKNEEGKDVTSTHCSFISQ-----NQTNSSQEI 212
              +   T        N +  R+              S +  F SQ         S QE 
Sbjct: 307 EPVRSTAT-------LNDVSWRQ-------------RSNNGGFSSQMVGGVRAEQSVQEP 352

The following BLAST results are available for this feature:

BLAST of Sed0023317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899697.1	4.1e-70	71.63	uncharacterized protein LOC120086955 isoform X1 [Benincasa hispida]	[more]
XP_022992554.1	2.6e-69	69.71	uncharacterized protein LOC111488842 isoform X1 [Cucurbita maxima]	[more]
XP_023548800.1	1.3e-68	70.67	uncharacterized protein LOC111807346 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022953989.1	6.5e-68	70.19	uncharacterized protein LOC111456382 isoform X1 [Cucurbita moschata]	[more]
XP_038899698.1	1.9e-67	70.67	uncharacterized protein LOC120086955 isoform X2 [Benincasa hispida]	[more]

BLAST of Sed0023317 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXV2	1.3e-69	69.71	uncharacterized protein LOC111488842 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GRJ3	3.2e-68	70.19	uncharacterized protein LOC111456382 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JW11	6.0e-67	68.75	uncharacterized protein LOC111488842 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GR68	1.5e-65	69.23	uncharacterized protein LOC111456382 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1D8Z6	6.2e-64	68.87	uncharacterized protein LOC111018471 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Sed0023317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02830.1	9.5e-09	35.16	unknown protein; Has 74 Blast hits to 74 proteins in 13 species: Archae - 0; Bac...	[more]
AT4G02830.2	9.5e-09	35.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G59050.1	1.2e-08	27.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G54000.1	1.4e-04	32.03	CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPr...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..180
None	No IPR available	PANTHER	PTHR33356	TIP41-LIKE PROTEIN	coord: 32..211
None	No IPR available	PANTHER	PTHR33356:SF13	OS01G0850000 PROTEIN	coord: 32..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023317.1	Sed0023317.1	mRNA