Sed0023264 (gene) Chayote v1

Overview


Name	Sed0023264
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein DCL homolog, chloroplastic
Location	LG01: 21308986 .. 21311953 (+)
RNA-Seq Expression	Sed0023264
Synteny	Sed0023264

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAGGCAGACCGGAGGATGGGGATTGAAGAAAATTTCTGTATTTTCTCCAAATCCATGAGATTGATGATAATGTGAGAGACCGTTAACAGTTCTTCTTCTTCTTCATAATTTTCTAATAATTTTCGAGAAAAAACGATGCTCTGCAATCGCAGGCTACAATTTCGTCCTCAATAGCTGCAAATTCAAGCTGAAACACGGGCAAGGTCATGGCCATGGCGTCCATTTTGAATCCACCGCCATTTGCGCCATTTTACGCCCTAAATCCAAGCTTCTTCAACTCTTCACCAGCGATCTTATGTTTTCCAGCGCAGCCAATGACTCGTGCCCTAAAGACTGGCCCCGAAGGCACTAGAATTCGGAGCCACGAAGAATTTAGCTCCGATTTGCTGCGGAAACCGGTTGTTCCGCCGGCGAAGGACATGGCCGGATCATCGGAGGATGACGTGAGCAGCGAGGAGAGTGGAAATGACGAGGAGGAGGTTTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTTGTTGGCTTTGTTAGGATGGTGCTTCACTCTGGAAAGTAAGTATTCGTTTTTTTCTTGACTTTATTGATTGAATTTGAGGCTTGTTCCAGGTGAAATAGAGTTTGTGCTATTTTGTTATTAAGTGAATATTTAGCTGGTTGTTGCTTAAATTTGAATCGTGTTACTCGAAAATGAACGGAACTATATAACTTGCGATTGAAATTGTTGAACTTTCATGGAACTTTTATCAATTTCCAGAGCAAGTAAGAACAACAATTGAGAGTCCTGTGAATTGAGAGTCCTGTGAATTAGTTTCTTCAAAGTTCATTGATGTTAGAATCAATTTGTTCGAATTTAATCATGGCTTGACTTTCCTAGAGGCTCTTGCAACAATATATACTCAACCTTTTGGTCGCCCATGGGTATTACTTGATTTACTTTCAATATGATCTTACAATATGAATGGTTAAGATGAATTATATATGATGTACCAATATGAAGGCTAAGTCTACAGTTTACTACATAAATTTCTCTCTCTTACTAATCTTATATTCCAACGATCATTTAGAAGTTCAAGTTGCTATGATTCAGCATATCTCCTAACAGAATATGTTAACGTTTTATAGTTGTTTTTCTTAACTAGGATATACGAGGTGTCTTGGCTGTGTTCTTTTATCATGTAATGTCAACTAATTTAGCACTTACTATCTGAAAGAAAATACTTGAGAAACTAATAAAGAAAAGGTTCAATCCATAGTGACCACCTGCTAAGAATTAATTTCTTTCTTGTTTCTTTGGCAACAAAATGTCCTGTGAGATTAGTCAAGGGTAAATAAGTTGGCCCAGACATTAGTAGATATAAAAAATATATATTATCATAAAGAAATATATACTATCTTGAATTGATTAGCATGATGAGGTGAAGTGTACTCTCCATTTGTTAATCGTCTTTAATCAAGCATATGCAGATATGGAAGTGGGGATAGGTTAAGCCCAGAACACGAGAAAACAATTCTTGACAGGTTGCTTCCATACCATCCTGAGTGTGAGAAGAAGGTTGGATGTGGGATTGATTATATCACGGTATGTATATCTCTCGTTCTCCATATTTTTGCATGCCTCGTGTTTTAGCCTGTTTTTAGAAGTTATATTTACATTCGTCCAGGGGTGGCACAATGGTTGAAGACTTGGGCTTTGAAGGTATGCTCCCTTCAAGGTCTCGGGTTCGAGTTTCACGTGTGATATTAGTCCTTCGATATCTCTAATGTCTGGTCTAAGAACTGGCGTGGTTACCCTTGTTTCAAAAGAAGAAGTTCCATTTACATTCAGTAAAATAGCTGATTAGATACACTAGCCTTTTTTCAATTTCCTTGGATGAAAATTTATTTTGTGGTGAATCTGGTAAGGAAATTTAATATGCATTATCAATTTTTTTGATTACTTCTAATGAAACTTCTTGGTTATCTGTTGATGAGATTGGAGCTCATAATCCTAAAATATGTCTATAATGTTTGACTTAAAAAGGTCCCCAAAGGGTAGCCTCGTTGGTTGAGGCTTGGAGCTTTCAAAACATGCTCCTTGGTGGTCTTAGCTTCGAAACCACTTAATTGTAAAATTTCTTGTTGTGTCTCGAGTTTGGGTCATGGGACGGGCGCGGGTTTACTTGAGTATAGCTTCCCAGTTTTTTTAAAAAATGTTTGACTTAAAAAGATGTAACTTGTTGCGGAACAGAACGTGAAGATACATAAAGTACTCATTGTGCATAGTGAGAAACATTGGCATTGATAATTGAAAACGACGAAACGTTTTGGATCTTTGTTGAAACATCGTAATATTCAGTTGATTGTATATTTGTTATGCTGTCAAAAGGGTTATTCGTATGACTCGACTTTTGTCTCTTGTTGAGGAAAATTGGAAAAAGAAGGAAACCTGCTTATGGGCAGTGCCATTTTCGCTTTTGAACTATTTTCTTTGAAATTAATCTTAGCATTGAATACATACTCTGTCTTTGTTCACTGAAATGATGATAACAATTGGTGTTTGTGGTCGGCAGATTGGATATCATCCTGATTTTGTAAGCTCAAGATGTTTATTCATAGTCAGGAAAGATGGAGAGTTGGTTGATTTTTCATATTGGAAGTGCATCAAGGGTATGATCAGAAAGAAGTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGGCGTAGACGCAATCTCCGTCGGTAACGCATACAAGATCTGTTAATAATACTATTGTACACCATTCAATTTCAGGAATTCCTTGAATATCAAAGCTTGAAATTGGCTTACCACGCTTGTGTGGTTCTCTAGTGTGTAATGATTTGAAATGCACGAATGGATATAGGGTGAAGGTAGTAGACTCTTGCTTGACGAAGCTTCTTGTAAAATTGAATTTTGTAAATCCTAACCGTTACCTCCAATTTCCATGATCC

mRNA sequence

GCCAGGCAGACCGGAGGATGGGGATTGAAGAAAATTTCTGTATTTTCTCCAAATCCATGAGATTGATGATAATGTGAGAGACCGTTAACAGTTCTTCTTCTTCTTCATAATTTTCTAATAATTTTCGAGAAAAAACGATGCTCTGCAATCGCAGGCTACAATTTCGTCCTCAATAGCTGCAAATTCAAGCTGAAACACGGGCAAGGTCATGGCCATGGCGTCCATTTTGAATCCACCGCCATTTGCGCCATTTTACGCCCTAAATCCAAGCTTCTTCAACTCTTCACCAGCGATCTTATGTTTTCCAGCGCAGCCAATGACTCGTGCCCTAAAGACTGGCCCCGAAGGCACTAGAATTCGGAGCCACGAAGAATTTAGCTCCGATTTGCTGCGGAAACCGGTTGTTCCGCCGGCGAAGGACATGGCCGGATCATCGGAGGATGACGTGAGCAGCGAGGAGAGTGGAAATGACGAGGAGGAGGTTTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTTGTTGGCTTTGTTAGGATGGTGCTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAACACGAGAAAACAATTCTTGACAGGTTGCTTCCATACCATCCTGAGTGTGAGAAGAAGGTTGGATGTGGGATTGATTATATCACGATTGGATATCATCCTGATTTTGTAAGCTCAAGATGTTTATTCATAGTCAGGAAAGATGGAGAGTTGGTTGATTTTTCATATTGGAAGTGCATCAAGGGTATGATCAGAAAGAAGTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGGCGTAGACGCAATCTCCGTCGGTAACGCATACAAGATCTGTTAATAATACTATTGTACACCATTCAATTTCAGGAATTCCTTGAATATCAAAGCTTGAAATTGGCTTACCACGCTTGTGTGGTTCTCTAGTGTGTAATGATTTGAAATGCACGAATGGATATAGGGTGAAGGTAGTAGACTCTTGCTTGACGAAGCTTCTTGTAAAATTGAATTTTGTAAATCCTAACCGTTACCTCCAATTTCCATGATCC

Coding sequence (CDS)

ATGGCCATGGCGTCCATTTTGAATCCACCGCCATTTGCGCCATTTTACGCCCTAAATCCAAGCTTCTTCAACTCTTCACCAGCGATCTTATGTTTTCCAGCGCAGCCAATGACTCGTGCCCTAAAGACTGGCCCCGAAGGCACTAGAATTCGGAGCCACGAAGAATTTAGCTCCGATTTGCTGCGGAAACCGGTTGTTCCGCCGGCGAAGGACATGGCCGGATCATCGGAGGATGACGTGAGCAGCGAGGAGAGTGGAAATGACGAGGAGGAGGTTTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCTCTTGTTGGCTTTGTTAGGATGGTGCTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAACACGAGAAAACAATTCTTGACAGGTTGCTTCCATACCATCCTGAGTGTGAGAAGAAGGTTGGATGTGGGATTGATTATATCACGATTGGATATCATCCTGATTTTGTAAGCTCAAGATGTTTATTCATAGTCAGGAAAGATGGAGAGTTGGTTGATTTTTCATATTGGAAGTGCATCAAGGGTATGATCAGAAAGAAGTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGGCGTAGACGCAATCTCCGTCGGTAA

Protein sequence

MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMTRALKTGPEGTRIRSHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEVWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRRNLRR

Homology

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BLAST of Sed0023264 vs. NCBI nr
Match: XP_038897137.1 (protein DCL homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 391.3 bits (1004), Expect = 5.2e-105
Identity = 194/225 (86.22%), Postives = 204/225 (90.67%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHE 60
           MAMASIL PPPF P ++LNP+FFNSSP ILCFP QPM      TRALKTGPEG+RIRSHE
Sbjct: 3   MAMASILKPPPFVPSHSLNPNFFNSSPVILCFPTQPMTSFHLSTRALKTGPEGSRIRSHE 62

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEVWVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPVVPPA+D+A  SEDD SSEESGND  EEE WVDWEDKILEDTVPLVGFVR
Sbjct: 63  EYSSDLLRKPVVPPARDLARLSEDDDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVR 122

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLHSGKYGSGDRL+PEHEKTILDRLLPYHPE EKK+GCGIDYITIGYHPDF SSRCLFI
Sbjct: 123 MVLHSGKYGSGDRLNPEHEKTILDRLLPYHPESEKKIGCGIDYITIGYHPDFESSRCLFI 182

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHF-RRRRNLRR 217
           VRKDGELVDFSYWKCIKG+IRKKYPLHAESFILRHF RRRRN RR
Sbjct: 183 VRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR 227

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BLAST of Sed0023264 vs. NCBI nr
Match: XP_022133006.1 (protein DCL homolog, chloroplastic [Momordica charantia])

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102
Identity = 188/220 (85.45%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMT------RALKTGPEGTRIRSHE 60
           MAMAS+  PPPF PF++LNPSF NSSP ILCFP  PMT      RALKTGPEG+RIRSHE
Sbjct: 1   MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHE 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEVWVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPVVPPAKD A  SEDD  SEESG D  EEE WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEEDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLHSGKYGSGDRLS EHEKTILDRLLPYHPECEKK+GCGIDYITIGYHPDF SSRCLFI
Sbjct: 121 MVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRR 213
           VRKDGELVDFSYWKCIKG+IRK YPLHAESFILRHFRRRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRR 220

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BLAST of Sed0023264 vs. NCBI nr
Match: XP_008452556.1 (PREDICTED: protein DCL, chloroplastic [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100
Identity = 186/225 (82.67%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHE 60
           MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--WVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHF-RRRRNLRR 217
           VRKDGELVDFSYWKCIKG+IRK YPL+AESFILRHF RRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

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BLAST of Sed0023264 vs. NCBI nr
Match: KAA0064386.1 (protein DCL [Cucumis melo var. makuwa] >TYK20201.1 protein DCL [Cucumis melo var. makuwa])

HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100
Identity = 186/225 (82.67%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHE 60
           MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--WVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHF-RRRRNLRR 217
           VRKDGELVDFSYWKCIKG+IRK YPL+AESFILRHF RRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

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BLAST of Sed0023264 vs. NCBI nr
Match: XP_004141259.1 (protein DCL homolog, chloroplastic [Cucumis sativus] >KGN55194.1 hypothetical protein Csa_011993 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 9.6e-99
Identity = 183/225 (81.33%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHE 60
           MAMASIL PPPF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG R+RSH+
Sbjct: 1   MAMASILKPPPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGIRLRSHQ 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGN-DEEEV-WVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPV P AKD+AG SEDD SSEESGN DEEEV WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVGPSAKDLAGPSEDDDSSEESGNEDEEEVEWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLH+GKY +GDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFI
Sbjct: 121 MVLHTGKYENGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHF-RRRRNLRR 217
           VRKDGE+VDFSYWKCIKG+IRK YPL+AESFILRHF RRRRN RR
Sbjct: 181 VRKDGEMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNSRR 225

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BLAST of Sed0023264 vs. ExPASy Swiss-Prot
Match: Q9C642 (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.3e-69
Identity = 131/224 (58.48%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 1   MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIR 60
           M++ASI +  P A P++        F+SSP  L FP       +P  RAL+T  +G +I 
Sbjct: 1   MSLASIPSSSPVASPYFRCRTYIFSFSSSPLCLYFPRGDSTSLRPRVRALRTESDGAKIG 60

Query: 61  SHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEVWVDWEDKILEDTVPLVGFV 120
           + E + S+LLR+P +      +  S ++   EE  N E + +VDWEDKILE TVPLVGFV
Sbjct: 61  NSESYGSELLRRPRI-----ASEESSEEEEEEEEENSEGDEFVDWEDKILEVTVPLVGFV 120

Query: 121 RMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLF 180
           RM+LHSGKY + DRLSPEHE+TI++ LLPYHPECEKK+GCGIDYI +G+HPDF SSRC+F
Sbjct: 121 RMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMF 180

Query: 181 IVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRRNLR 216
           IVRKDGE+VDFSYWKCIKG+I+KKYPL+A+SFILRHFR+RR  R
Sbjct: 181 IVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQNR 219

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BLAST of Sed0023264 vs. ExPASy Swiss-Prot
Match: Q42463 (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64
Identity = 129/213 (60.56%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 8   NPPPFAPFYALNP---SFFNSSPAILCFPAQPMTRALKTGPEGTRIRSHEEFSSDLLRKP 67
           N  P +    L+P   SF       LC  A     A+KTG EG  IRS    +++LLRKP
Sbjct: 17  NSSPISHHLLLSPSSLSFSRCGGLRLCRCA-----AVKTGSEGGGIRSD---NAELLRKP 76

Query: 68  VVPPAKDMAGSSED---DVSSEESG--NDEEEVWVDWEDKILEDTVPLVGFVRMVLHSGK 127
           V+    +    SE+   + S +E G  + + E WVDWED+ILEDTVPLVGFVRM+LHSGK
Sbjct: 77  VISTELETTSESEELVKEESDDEVGKKSGDGEGWVDWEDQILEDTVPLVGFVRMILHSGK 136

Query: 128 YGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGEL 187
           Y  GDRLSP+H++TIL RLLPYHPEC+KK+G G+DYIT+GYHPDF +SRCLFIVRKDGE 
Sbjct: 137 YAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVDYITVGYHPDFENSRCLFIVRKDGET 196

Query: 188 VDFSYWKCIKGMIRKKYPLHAESFILRHFRRRR 213
           VDFSYWKCIKG+IRK YPL+A+SFILRHFR+RR
Sbjct: 197 VDFSYWKCIKGLIRKNYPLYADSFILRHFRKRR 221

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BLAST of Sed0023264 vs. ExPASy Swiss-Prot
Match: Q5D869 (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-21
Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 97   EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYI 156
            E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+I
Sbjct: 1736 EQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFI 1795

Query: 157  TIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRR 213
            T+  H  F  SRC F+V  DG   DFSY K +   + KKYP  AE FI ++F + R
Sbjct: 1796 TVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPR 1851

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BLAST of Sed0023264 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 134 ILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCI 189
           +LD +   H E EKK+G GI    +  HP +  SRC F+VR+D    DFS+ KC+
Sbjct: 105 LLDLIKKGHSEPEKKIGGGIKTFQVRTHPMW-KSRCFFLVREDDTADDFSFRKCV 158

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BLAST of Sed0023264 vs. ExPASy Swiss-Prot
Match: P85936 (Protein DCL, chloroplastic (Fragment) OS=Pseudotsuga menziesii OX=3357 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.1e-04
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 0


Query: 93  WVDWEDKILEDTVPLVGFVRMV 115
           WVDWED+IL+DTVPLV FVRM+
Sbjct: 2   WVDWEDQILQDTVPLVNFVRMI 23

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BLAST of Sed0023264 vs. ExPASy TrEMBL
Match: A0A6J1BTU2 (protein DCL homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005680 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.3e-103
Identity = 188/220 (85.45%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPMT------RALKTGPEGTRIRSHE 60
           MAMAS+  PPPF PF++LNPSF NSSP ILCFP  PMT      RALKTGPEG+RIRSHE
Sbjct: 1   MAMASVSKPPPFPPFHSLNPSFLNSSPVILCFPMHPMTSLHPSIRALKTGPEGSRIRSHE 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGND--EEEVWVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPVVPPAKD A  SEDD  SEESG D  EEE WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDFARISEDDEGSEESGTDGEEEEDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLHSGKYGSGDRLS EHEKTILDRLLPYHPECEKK+GCGIDYITIGYHPDF SSRCLFI
Sbjct: 121 MVLHSGKYGSGDRLSLEHEKTILDRLLPYHPECEKKIGCGIDYITIGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRR 213
           VRKDGELVDFSYWKCIKG+IRK YPLHAESFILRHFRRRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRRRR 220

[Close]

BLAST of Sed0023264 vs. ExPASy TrEMBL
Match: A0A5A7VDC9 (Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003370 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.4e-101
Identity = 186/225 (82.67%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHE 60
           MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--WVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHF-RRRRNLRR 217
           VRKDGELVDFSYWKCIKG+IRK YPL+AESFILRHF RRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

[Close]

BLAST of Sed0023264 vs. ExPASy TrEMBL
Match: A0A1S3BVA4 (protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493543 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.4e-101
Identity = 186/225 (82.67%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHE 60
           MAMASIL   PF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG+RIRSH+
Sbjct: 1   MAMASILTLLPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGSRIRSHQ 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEV--WVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPVVPPAKD+AG SEDD SSEESGNDEEE   WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDEEEEVDWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLH+GKY SGDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFI
Sbjct: 121 MVLHTGKYESGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHF-RRRRNLRR 217
           VRKDGELVDFSYWKCIKG+IRK YPL+AESFILRHF RRRRNLRR
Sbjct: 181 VRKDGELVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNLRR 225

[Close]

BLAST of Sed0023264 vs. ExPASy TrEMBL
Match: A0A0A0L2D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639820 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.6e-99
Identity = 183/225 (81.33%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPAQPM------TRALKTGPEGTRIRSHE 60
           MAMASIL PPPF PF++LNP+FFNSSP ILCFP  P+      TRALKTGPEG R+RSH+
Sbjct: 1   MAMASILKPPPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGIRLRSHQ 60

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGN-DEEEV-WVDWEDKILEDTVPLVGFVR 120
           E+SSDLLRKPV P AKD+AG SEDD SSEESGN DEEEV WVDWEDKILEDTVPLVGFVR
Sbjct: 61  EYSSDLLRKPVGPSAKDLAGPSEDDDSSEESGNEDEEEVEWVDWEDKILEDTVPLVGFVR 120

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLH+GKY +GDRL PEHEKTIL+RLLPYHPE EKK+GCG+DYIT+GYHPDF SSRCLFI
Sbjct: 121 MVLHTGKYENGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFI 180

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHF-RRRRNLRR 217
           VRKDGE+VDFSYWKCIKG+IRK YPL+AESFILRHF RRRRN RR
Sbjct: 181 VRKDGEMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRNSRR 225

[Close]

BLAST of Sed0023264 vs. ExPASy TrEMBL
Match: A0A6J1FJS0 (protein DCL homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445979 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.3e-97
Identity = 181/223 (81.17%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 1   MAMASILNPPPFAPFYALNPSFFNSSPAILCFPA------QPMTRALKTGPEGTRIRSHE 60
           MA+ASIL PPP  PF++LNPSFF SSP ILCFP        P TRAL TGPEG+RIRSHE
Sbjct: 3   MAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALNTGPEGSRIRSHE 62

Query: 61  EFSSDLLRKPVVPPAKDMAGSSEDDVSSEESG--NDEEEVWVDWEDKILEDTVPLVGFVR 120
           E SSDLLRKPVVPPAKD+AG SED+ SSEESG  +DEEE WVDWE+ ILEDTVPLV FVR
Sbjct: 63  ECSSDLLRKPVVPPAKDLAGLSEDEESSEESGDDDDEEEDWVDWENIILEDTVPLVTFVR 122

Query: 121 MVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFI 180
           MVLHSGKY  GDRLSPEHEKTIL+RLLPYHP+ EKKVGCGIDYIT+ YHPD+ SSRCLFI
Sbjct: 123 MVLHSGKYEIGDRLSPEHEKTILERLLPYHPKYEKKVGCGIDYITVRYHPDYESSRCLFI 182

Query: 181 VRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRRNLR 216
           VRKDGELVDFSYWKCIK +IRKKYPLHAESFILRHFRRRRNLR
Sbjct: 183 VRKDGELVDFSYWKCIKSLIRKKYPLHAESFILRHFRRRRNLR 225

[Close]

BLAST of Sed0023264 vs. TAIR 10
Match: AT1G45230.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 261.9 bits (668), Expect = 4.5e-70
Identity = 131/224 (58.48%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 1   MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIR 60
           M++ASI +  P A P++        F+SSP  L FP       +P  RAL+T  +G +I 
Sbjct: 1   MSLASIPSSSPVASPYFRCRTYIFSFSSSPLCLYFPRGDSTSLRPRVRALRTESDGAKIG 60

Query: 61  SHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEVWVDWEDKILEDTVPLVGFV 120
           + E + S+LLR+P +      +  S ++   EE  N E + +VDWEDKILE TVPLVGFV
Sbjct: 61  NSESYGSELLRRPRI-----ASEESSEEEEEEEEENSEGDEFVDWEDKILEVTVPLVGFV 120

Query: 121 RMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLF 180
           RM+LHSGKY + DRLSPEHE+TI++ LLPYHPECEKK+GCGIDYI +G+HPDF SSRC+F
Sbjct: 121 RMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMF 180

Query: 181 IVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRRNLR 216
           IVRKDGE+VDFSYWKCIKG+I+KKYPL+A+SFILRHFR+RR  R
Sbjct: 181 IVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQNR 219

[Close]

BLAST of Sed0023264 vs. TAIR 10
Match: AT1G45230.2 (Protein of unknown function (DUF3223) )

HSP 1 Score: 258.8 bits (660), Expect = 3.8e-69
Identity = 130/224 (58.04%), Postives = 165/224 (73.66%), Query Frame = 0


Query: 1   MAMASILNPPPFA-PFYALNPSF--FNSSPAILCFP------AQPMTRALKTGPEGTRIR 60
           M++ASI +  P A P++        F+SSP  L FP       +P  RAL+T  +G +I 
Sbjct: 1   MSLASIPSSSPVASPYFRCRTYIFSFSSSPLCLYFPRGDSTSLRPRVRALRTESDGAKIG 60

Query: 61  SHEEFSSDLLRKPVVPPAKDMAGSSEDDVSSEESGNDEEEVWVDWEDKILEDTVPLVGFV 120
           + E + S+LLR+P +      +  S ++   EE  N E + +VDWEDKILE TVPLVGFV
Sbjct: 61  NSESYGSELLRRPRI-----ASEESSEEEEEEEEENSEGDEFVDWEDKILEVTVPLVGFV 120

Query: 121 RMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLF 180
           RM+LHSGKY + DRLSPEHE+TI++ LLPYHPECEKK+GCGIDYI + +HPDF SSRC+F
Sbjct: 121 RMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVWHHPDFESSRCMF 180

Query: 181 IVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRRNLR 216
           IVRKDGE+VDFSYWKCIKG+I+KKYPL+A+SFILRHFR+RR  R
Sbjct: 181 IVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQNR 219

[Close]

BLAST of Sed0023264 vs. TAIR 10
Match: AT3G46630.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 93  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCG 152
           W + E +IL D  P+    + +LHS +Y  G+RL  E EK ++++LLPYHP  + K+GCG
Sbjct: 87  WKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCG 146

Query: 153 IDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRR 211
           +D+I +  HP F  SRCLF+VR DG  +DFSY KC++  +R KYP HAE FI  HF+R
Sbjct: 147 LDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKR 204

[Close]

BLAST of Sed0023264 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B )

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 97   EDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPECEKKVGCGIDYI 156
            E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+I
Sbjct: 1736 EQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFI 1795

Query: 157  TIGYHPDFVSSRCLFIVRKDGELVDFSYWKCIKGMIRKKYPLHAESFILRHFRRRR 213
            T+  H  F  SRC F+V  DG   DFSY K +   + KKYP  AE FI ++F + R
Sbjct: 1796 TVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPR 1851

[Close]

BLAST of Sed0023264 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 134 ILDRLLPYHPECEKKVGCGIDYITIGYHPDFVSSRCLFIVRKDGELVDFSYWKCI 189
           +LD +   H E EKK+G GI    +  HP +  SRC F+VR+D    DFS+ KC+
Sbjct: 105 LLDLIKKGHSEPEKKIGGGIKTFQVRTHPMW-KSRCFFLVREDDTADDFSFRKCV 158

The following BLAST results are available for this feature:

BLAST of Sed0023264 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897137.1	5.2e-105	86.22	protein DCL homolog, chloroplastic [Benincasa hispida]	[more]
XP_022133006.1	1.1e-102	85.45	protein DCL homolog, chloroplastic [Momordica charantia]	[more]
XP_008452556.1	1.7e-100	82.67	PREDICTED: protein DCL, chloroplastic [Cucumis melo]	[more]
KAA0064386.1	1.7e-100	82.67	protein DCL [Cucumis melo var. makuwa] >TYK20201.1 protein DCL [Cucumis melo var...	[more]
XP_004141259.1	9.6e-99	81.33	protein DCL homolog, chloroplastic [Cucumis sativus] >KGN55194.1 hypothetical pr...	[more]

BLAST of Sed0023264 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C642	6.3e-69	58.48	Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 S...	[more]
Q42463	1.6e-64	60.56	Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1	[more]
Q5D869	3.7e-21	38.79	DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1...	[more]
Q8L557	2.9e-05	43.64	Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1	[more]
P85936	7.1e-04	81.82	Protein DCL, chloroplastic (Fragment) OS=Pseudotsuga menziesii OX=3357 PE=1 SV=1	[more]

BLAST of Sed0023264 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BTU2	5.3e-103	85.45	protein DCL homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11100568...	[more]
A0A5A7VDC9	8.4e-101	82.67	Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003370 P...	[more]
A0A1S3BVA4	8.4e-101	82.67	protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493543 PE=4 SV=1	[more]
A0A0A0L2D0	4.6e-99	81.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639820 PE=4 SV=1	[more]
A0A6J1FJS0	3.3e-97	81.17	protein DCL homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Sed0023264 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45230.1	4.5e-70	58.48	Protein of unknown function (DUF3223)	[more]
AT1G45230.2	3.8e-69	58.04	Protein of unknown function (DUF3223)	[more]
AT3G46630.1	1.3e-32	49.15	Protein of unknown function (DUF3223)	[more]
AT2G40030.1	2.6e-22	38.79	nuclear RNA polymerase D1B	[more]
AT5G62440.1	2.0e-06	43.64	Protein of unknown function (DUF3223)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.40		coord: 106..194 e-value: 5.2E-25 score: 89.8
None	No IPR available	PFAM	PF11523	DUF3223	coord: 113..188 e-value: 1.5E-27 score: 96.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..89
None	No IPR available	PANTHER	PTHR33415:SF15	PROTEIN DCL HOMOLOG, CHLOROPLASTIC	coord: 21..213
IPR044673	Protein DCL-like	PANTHER	PTHR33415	FAMILY NOT NAMED	coord: 21..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023264.1	Sed0023264.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding