Sed0023225 (gene) Chayote v1

Overview


Name	Sed0023225
Type	gene
Organism	Sechium edule (Chayote v1)
Description	serine/threonine-protein phosphatase 6 regulatory subunit 2
Location	LG10: 589169 .. 592723 (-)
RNA-Seq Expression	Sed0023225
Synteny	Sed0023225

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCGTAGGGTCGGCGGCGCCATTTTTGTGCTGCTACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTTGACCAGACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTTGACCAGACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTCGACCAGACGGTGGAATTGCTGGGCTTGTCGTCGGCGGAGGAAGATCTCCGTTCAAGCCACCGAGCATATCGCCGGAATCCAGAACTAGGGATTTGAGTGACAGCGAGGGGGTTTTCCACGTAGGTAATTTTTTTCGGAAATTATTAATGACGTCATAAATTAAAAAGGGGTTTCAGTTAAAAAATTAGTTAAAACGTGTAACTGAAAACTTCTTACACCCTTCTTCTTCTTCATTCATTCGATGCATCACTTTCAGATTTTACTACTAGGGTTTCCATTACTCCAAGCTATTTGATTTCTGGGCTAGTTGATCTGATTTGAGTGTTTCTTGGTAATCTTTCCCGAAATTTCATCGCCATGGCTGCATTGTCTGTGAGTATTCTTTCTTTCTTTTCATAAGAAATGTTGTTCTTGTAGATGTAGAGTTCGTCATTATTTAATTTCATGTTCTTTCGTATCAGGAATGCAAAGAATGTAATGATCGACTTATCAACTGGTAAGATTCTTTACCCATGTTGGTCCATACTTGGCTGATGTGCTTTTTGGGATAGGGGATCCAAACCTATAACGTCGTAGTCTTTCAATTATCTTTATACAAACTAGTTACCATGCTCATAGGTCTAAAACCGTCCCCATGCCGTCTTTCTCGAACTTAGGTTTCCTTTTCGTCTTTGGGATAGGGATCCAAACCTATAACGTTGCAGTCTTTCAATTATCTTGCACAAACTAGTTGCAATGCTCATAGGTCTAAAACCGTCCCTGTGCCGTCTTTCTTGAATTTTTAATATTTGTTATTCTCATGTTTTTCCTTCTTAGGTTTCCTTTCGTCCCTGTAACCCTGATGTCGCGGAAGAGAATTCCTCTTATGGAACATCTTCATCTTCAAGTAAGCTCACTTGTGAACTGTGAACTCTTTGGTGTGTTTTTCTATCCTGTTGAGATCATGTGGAGTTCTTACATTTCTTATTTCTTCTAGTTTTTCATTTAAGTTATACATCTTTTCTATTTTAATTCTTTTTAAAGCACTTCACATCCAAAAAAGATTAAGCAACATATACCAACTGTTTTAAGGCAGATGATCTACTTTGTTGGTTAACTAATCACTCACATGGCTTTCCAGGCACATCAAGCAATTGTTAAGAAGCTAGTTGATCTGATAGGAATTACTTCCACCCTGAAGGTTGGTTGTCGGTCATCTTTCTTTGTTTGCATCTCGTATTTTAACTCTTTTCTTACCGTAATTACAAGTTGTATGTTTTCAGACGACCACGGTCATCATCCTTCCTTCTGCTATATGAAATCTGTTGGGCTTTAAAATGTTAACTGACTATACATTATGAAGCTCATTGGAACGTTCTTTCTGAACAGGTTTTAGTAAGGCTTTATGGTGCTGATGAGCATCTGTACTCAAGCTATACAGAGTCAATGAAGTGGACTGAAGAGACTGATTTTCTGGAGGTGATAGTGGAAAAATTCAGCTCTTCAGTAAGTAGCTTTTTGGGGAAGTTATTCCTGGTTGTTTACATGCCTTTTTATTCCATGGAGACTGATGTTCTGGAGATGATATGGTTATTTGCAGTTGAACTTGCTGCCTTCCTCCCTAGAACCCAGGCCAACTACTGGAATAGCTCATGCATACAACCGCCAAATAACTCATGGATCAGTAACTATGGAGGTTGTAGAAGGCATGTTGGAGAGTTCAGGTATCGTAATGGCCATTGGGTCTTATTAAGTCCATGATTTTCGTACCTATTACGTCATGAAGGTATTATTACTAGCAATGAATCAGCCAAGCCAAGTTGATTACTTGTAGTTACTAGCAGGATCCTCACAGTTAAAGAAAATTTCTTACTTTATGGTATTGCAAGTCATTTTTATTTTTGATTTCCTGGAGAAACTAAAATTCACTTAAATAATGAAGTGTATTAAAGAGGAATTGTAGACAAGAATATGTAATCGTGCTTGCTTGAGTTAGCTTTTTGTACGTTTTTGCTTGATGTTGAATACTGTTGTGGTCTCTATTGTTCAGGTGGGATGGTCAAGCTTCTGGATGTCTCTTCATCAGAGACAGTTTTGGTTACTACATACGGAAAGTTACAGCCACCTCTTGGGAAACATCGTCCAAGGGTATCTCTTTTGTTTTCATTTAAGTGTATATAGGGCTCTACTATAAACTTGATACTTAAAGGCCCGTTTGATAACCATTTTCCTTAACTTTTGGTTTTAGAAATTTAAGCCTACCACAATTATCTTGACATATATTTTTCTTACTTGGATGTTTATACATTGCCTATATTTGTAGAAACCAAATAAGTAAGCTTTAAAAAAACTTGTTTTTGTTTTTGAAATTTAAGTAGCATTTAGGAATGATGGAACATATTGTAGGAAAATTCAAATAGGAATAAACTTAAATTTCAAAAACAAAAAATTACAAAACCAAATGGTTATCAAACGTGGCTTAAATCATTTGTTTATTTTTAAAAGAAATGAATGTCATCGGTTAAAAGAATCATAGGTAGAAAAAAAATGGAATGCTTTAAGGTGGTTGTTGACATCTTGTCACCTCGCTTTTCAAGCCTTTTTCCCCTTAATGGAAGTAATAGTGTTTCTTATATAAAAAAAGAAGTCTGTGTAGGATTTTAGTCATAAATAAGTTTGCTCTCTATAAAGTTTGGTTGAAAAGACGTAAAATACTAAAAAAAATGCACGATATTACTTTTTTTTATTTATTTTAGTGACATTTATGAATTTATTTTTCAGGTGGTTCAGATGTATTTTTTGATTTTGATCATATTTTCCTTCCTTTTTCGAATGGGTTCATCATCTCCTACCCCACCTCCTCCATCTCTCCCTGCCTGCTCCCCTCCCCAAACCTCGACCCTCGATGCTGGCCTCCTCGCCAAACCGGCAGTTCTTTTTCTTGGGATTGTGGGAACAGGAACTTTTGCTAACCTCTTCATCCCTAAGCTGAAAAAATATCTTCAAAATGCACCTGATTTTGTCTTTGCCTTTCTCTACACCTTTTGTCTTGGAATTGTTTGCGTATACACTTCATACTACATCAACATAGTCCAAATAATAATAACCTGGGCTGAGCGTAAATACCCGGAAAAAAAGTGGCTAAACTGCCAGGAATTCCTGTGGGGGTTACTCGGGATTTTTATCATCTACTCCATTTATGCAGGTAGGTTATTCTGTTATATTAGTTTATTTTTTTTATAATTGCTTTTTTAACACTATGTATTAATTTTGTTTTTTTTTTTCTTCAAGTTTTTTATTATAGGGAAAAATTAATGTTGGTGGGGAATAGAATATTTTGTGCGTGTAGAAAACGTCAAAGTCACTCAAGCATGGTGAGGCGAGTAACCTAG

mRNA sequence

ATGGCTTTCGTAGGGTCGGCGGCGCCATTTTTGTGCTGCTACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTTGACCAGACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTTGACCAGACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTCGACCAGACGGTGGAATTGCTGGGCTTGTCGTCGGCGGAGGAAGATCTCCGTTCAAGCCACCGAGCATATCGCCGGAATCCAGAACTAGGGATTTGAGTGACAGCGAGGGGGTTTTCCACGAATGCAAAGAATGTAATGATCGACTTATCAACTGGTTTCCTTTCGTCCCTGTAACCCTGATGTCGCGGAAGAGAATTCCTCTTATGGAACATCTTCATCTTCAAGCACATCAAGCAATTGTTAAGAAGCTAGTTGATCTGATAGGAATTACTTCCACCCTGAAGGTTTTAGTAAGGCTTTATGGTGCTGATGAGCATCTGTACTCAAGCTATACAGAGTCAATGAAGTGGACTGAAGAGACTGATTTTCTGGAGGTGATAGTGGAAAAATTCAGCTCTTCATTGAACTTGCTGCCTTCCTCCCTAGAACCCAGGCCAACTACTGGAATAGCTCATGCATACAACCGCCAAATAACTCATGGATCAGTAACTATGGAGGTTGTAGAAGGCATGTTGGAGAGTTCAGGTGGGATGGTCAAGCTTCTGGATGTCTCTTCATCAGAGACAGTTTTGGTTACTACATACGGAAAGTTACAGCCACCTCTTGGGAAACATCGTCCAAGGGTGGTTCAGATGTATTTTTTGATTTTGATCATATTTTCCTTCCTTTTTCGAATGGGTTCATCATCTCCTACCCCACCTCCTCCATCTCTCCCTGCCTGCTCCCCTCCCCAAACCTCGACCCTCGATGCTGGCCTCCTCGCCAAACCGGCAGTTCTTTTTCTTGGGATTGTGGGAACAGGAACTTTTGCTAACCTCTTCATCCCTAAGCTGAAAAAATATCTTCAAAATGCACCTGATTTTGTCTTTGCCTTTCTCTACACCTTTTGTCTTGGAATTGTTTGCGTATACACTTCATACTACATCAACATAGTCCAAATAATAATAACCTGGGCTGAGCGTAAATACCCGGAAAAAAAGTGGCTAAACTGCCAGGAATTCCTGTGGGGGTTACTCGGGATTTTTATCATCTACTCCATTTATGCAGTTTTTTATTATAGGGAAAAATTAATGTTGGTGGGGAATAGAATATTTTGTGCGTGTAGAAAACGTCAAAGTCACTCAAGCATGGTGAGGCGAGTAACCTAG

Coding sequence (CDS)

ATGGCTTTCGTAGGGTCGGCGGCGCCATTTTTGTGCTGCTACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTTGACCAGACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTTGACCAGACGGTGGAATTGCTGGACTTGTCTTCCTCCGCCGTCGTTTGCTCGACCAGACGGTGGAATTGCTGGGCTTGTCGTCGGCGGAGGAAGATCTCCGTTCAAGCCACCGAGCATATCGCCGGAATCCAGAACTAGGGATTTGAGTGACAGCGAGGGGGTTTTCCACGAATGCAAAGAATGTAATGATCGACTTATCAACTGGTTTCCTTTCGTCCCTGTAACCCTGATGTCGCGGAAGAGAATTCCTCTTATGGAACATCTTCATCTTCAAGCACATCAAGCAATTGTTAAGAAGCTAGTTGATCTGATAGGAATTACTTCCACCCTGAAGGTTTTAGTAAGGCTTTATGGTGCTGATGAGCATCTGTACTCAAGCTATACAGAGTCAATGAAGTGGACTGAAGAGACTGATTTTCTGGAGGTGATAGTGGAAAAATTCAGCTCTTCATTGAACTTGCTGCCTTCCTCCCTAGAACCCAGGCCAACTACTGGAATAGCTCATGCATACAACCGCCAAATAACTCATGGATCAGTAACTATGGAGGTTGTAGAAGGCATGTTGGAGAGTTCAGGTGGGATGGTCAAGCTTCTGGATGTCTCTTCATCAGAGACAGTTTTGGTTACTACATACGGAAAGTTACAGCCACCTCTTGGGAAACATCGTCCAAGGGTGGTTCAGATGTATTTTTTGATTTTGATCATATTTTCCTTCCTTTTTCGAATGGGTTCATCATCTCCTACCCCACCTCCTCCATCTCTCCCTGCCTGCTCCCCTCCCCAAACCTCGACCCTCGATGCTGGCCTCCTCGCCAAACCGGCAGTTCTTTTTCTTGGGATTGTGGGAACAGGAACTTTTGCTAACCTCTTCATCCCTAAGCTGAAAAAATATCTTCAAAATGCACCTGATTTTGTCTTTGCCTTTCTCTACACCTTTTGTCTTGGAATTGTTTGCGTATACACTTCATACTACATCAACATAGTCCAAATAATAATAACCTGGGCTGAGCGTAAATACCCGGAAAAAAAGTGGCTAAACTGCCAGGAATTCCTGTGGGGGTTACTCGGGATTTTTATCATCTACTCCATTTATGCAGTTTTTTATTATAGGGAAAAATTAATGTTGGTGGGGAATAGAATATTTTGTGCGTGTAGAAAACGTCAAAGTCACTCAAGCATGGTGAGGCGAGTAACCTAG

Protein sequence

MAFVGSAAPFLCCYGGIAGLVFLRRRLLDQTVELLDLSSSAVVCLTRRWNCWTCLPPPSFARPDGGIAGLVVGGGRSPFKPPSISPESRTRDLSDSEGVFHECKECNDRLINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLYSSYTESMKWTEETDFLEVIVEKFSSSLNLLPSSLEPRPTTGIAHAYNRQITHGSVTMEVVEGMLESSGGMVKLLDVSSSETVLVTTYGKLQPPLGKHRPRVVQMYFLILIIFSFLFRMGSSSPTPPPPSLPACSPPQTSTLDAGLLAKPAVLFLGIVGTGTFANLFIPKLKKYLQNAPDFVFAFLYTFCLGIVCVYTSYYINIVQIIITWAERKYPEKKWLNCQEFLWGLLGIFIIYSIYAVFYYREKLMLVGNRIFCACRKRQSHSSMVRRVT

Homology

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BLAST of Sed0023225 vs. NCBI nr
Match: XP_023544148.1 (serine/threonine-protein phosphatase 6 regulatory subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.2 bits (474), Expect = 3.1e-43
Identity = 117/231 (50.65%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQITHG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQITHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. NCBI nr
Match: KAG6581469.1 (Serine/threonine-protein phosphatase 6 regulatory subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 3.1e-43
Identity = 117/231 (50.65%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 117 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 176

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 177 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 236

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQITHG   S TME VEG
Sbjct: 237 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQITHGSTVSATMETVEG 296

[Close]

BLAST of Sed0023225 vs. NCBI nr
Match: XP_022926020.1 (serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 187.2 bits (474), Expect = 3.1e-43
Identity = 117/231 (50.65%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQITHG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQITHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. NCBI nr
Match: XP_022926019.1 (serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 187.2 bits (474), Expect = 3.1e-43
Identity = 117/231 (50.65%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQITHG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQITHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. NCBI nr
Match: XP_022146511.1 (serine/threonine-protein phosphatase 6 regulatory subunit 2 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 6.8e-43
Identity = 116/231 (50.22%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK IP M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTIPFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IV+KFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVDKFSSSDCSEVHSNAAETLCAITRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A+ YNR ITHG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYIYNRPITHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. ExPASy TrEMBL
Match: A0A6J1EJU5 (serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433261 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-43
Identity = 117/231 (50.65%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQITHG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQITHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. ExPASy TrEMBL
Match: A0A6J1EDU6 (serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433261 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-43
Identity = 117/231 (50.65%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQITHG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQITHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. ExPASy TrEMBL
Match: A0A6J1CZK7 (serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Momordica charantia OX=3673 GN=LOC111015714 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.3e-43
Identity = 116/231 (50.22%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK IP M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTIPFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IV+KFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVDKFSSSDCSEVHSNAAETLCAITRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A+ YNR ITHG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYIYNRPITHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. ExPASy TrEMBL
Match: A0A6J1IIS2 (serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477833 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.3e-43
Identity = 116/231 (50.22%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQI+HG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQISHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. ExPASy TrEMBL
Match: A0A6J1IQ90 (serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477833 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.3e-43
Identity = 116/231 (50.22%), Postives = 140/231 (60.61%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + L+ RK I  M+  ++QAHQAIVKKLVDLIGITS ++VL+RL GADEHLY
Sbjct: 121 LAGYFSKVVICLLLRKTISFMQ--YVQAHQAIVKKLVDLIGITSIMEVLIRLLGADEHLY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSS----------------------------------- 229
           SSYTESMKW EETD LE+IVEKFSS                                   
Sbjct: 181 SSYTESMKWIEETDVLEMIVEKFSSSDSSEVHSNAAETLCAVTRFAPPGLLAKISSPSFV 240

Query: 230 -------------------SLNLLPSSLEPRP-TTGIAHAYNRQITHG---SVTMEVVEG 283
                              SL++  S L+PR  T G A++YNRQI+HG   S TME VEG
Sbjct: 241 GRLFRHALEDSRPTSVLINSLSVCISLLDPRRLTVGTAYSYNRQISHGSTVSATMETVEG 300

[Close]

BLAST of Sed0023225 vs. TAIR 10
Match: AT1G30470.1 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 154.1 bits (388), Expect = 2.7e-37
Identity = 101/241 (41.91%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 100 FHECKEC-NDRLINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVL 159
           F E KE  N  L  +F  V + L+ RK IP M+   ++ HQ I+K+LVDLIGITS ++VL
Sbjct: 110 FLEAKETHNSLLAGYFSKVVICLLVRKTIPFMQ--FIKDHQEILKQLVDLIGITSIMEVL 169

Query: 160 VRLYGADEHLYSSYTESMKWTEETDFLEVIVEKFSS------------------------ 219
            RL G DEHLYS+YT +M+W E+TD LE+IV+KF S                        
Sbjct: 170 KRLVGTDEHLYSNYTSAMQWIEDTDVLEMIVDKFGSSESPEVHANAAEILCTVARYAPPG 229

Query: 220 ------------------------------SLNLLPSSLEP-RPTTGIAHAYNRQITHGS 279
                                         SL++  S L+P R T G  H Y RQ+THGS
Sbjct: 230 LATKLSSPSCTGRLLKHTLEDSRPKSVLVNSLSVCISLLDPKRFTLGTYHIYGRQLTHGS 289

Query: 280 VTM--EVVEGMLESSGGMVKLLDVSSSETVLVTTYGKLQPPLGKHRPRVVQMYFLILIIF 283
           +    E VEGML S G ++ LL+VSS+E VL+TTYGKLQPPLGKHR ++V+   ++L + 
Sbjct: 290 MVTNPETVEGMLGSLGDLLMLLNVSSAEGVLLTTYGKLQPPLGKHRLKIVEFISVLLTVG 348

[Close]

BLAST of Sed0023225 vs. TAIR 10
Match: AT1G30470.2 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 154.1 bits (388), Expect = 2.7e-37
Identity = 101/241 (41.91%), Postives = 133/241 (55.19%), Query Frame = 0


Query: 100 FHECKEC-NDRLINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVL 159
           F E KE  N  L  +F  V + L+ RK IP M+   ++ HQ I+K+LVDLIGITS ++VL
Sbjct: 106 FLEAKETHNSLLAGYFSKVVICLLVRKTIPFMQ--FIKDHQEILKQLVDLIGITSIMEVL 165

Query: 160 VRLYGADEHLYSSYTESMKWTEETDFLEVIVEKFSS------------------------ 219
            RL G DEHLYS+YT +M+W E+TD LE+IV+KF S                        
Sbjct: 166 KRLVGTDEHLYSNYTSAMQWIEDTDVLEMIVDKFGSSESPEVHANAAEILCTVARYAPPG 225

Query: 220 ------------------------------SLNLLPSSLEP-RPTTGIAHAYNRQITHGS 279
                                         SL++  S L+P R T G  H Y RQ+THGS
Sbjct: 226 LATKLSSPSCTGRLLKHTLEDSRPKSVLVNSLSVCISLLDPKRFTLGTYHIYGRQLTHGS 285

Query: 280 VTM--EVVEGMLESSGGMVKLLDVSSSETVLVTTYGKLQPPLGKHRPRVVQMYFLILIIF 283
           +    E VEGML S G ++ LL+VSS+E VL+TTYGKLQPPLGKHR ++V+   ++L + 
Sbjct: 286 MVTNPETVEGMLGSLGDLLMLLNVSSAEGVLLTTYGKLQPPLGKHRLKIVEFISVLLTVG 344

[Close]

BLAST of Sed0023225 vs. TAIR 10
Match: AT1G30470.3 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-35
Identity = 101/279 (36.20%), Postives = 139/279 (49.82%), Query Frame = 0


Query: 92  DLSDSEGVFHECKECNDRLINW-----------------------------FPFVPVTLM 151
           DL D + +  ECK  N RL+N+                             FPF+   + 
Sbjct: 23  DLLDEDEIIQECKALNGRLLNFLREKVQVEQLIRYIIEEPLEDVEKKRTFKFPFIACEIF 82

Query: 152 SRKRIPLMEHL--HLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLYSSYTESMKWTE 211
           + +   +++ L    + HQ I+K+LVDLIGITS ++VL RL G DEHLYS+YT +M+W E
Sbjct: 83  TCEIEMILKTLVEDEEDHQEILKQLVDLIGITSIMEVLKRLVGTDEHLYSNYTSAMQWIE 142

Query: 212 ETDFLEVIVEKFSS---------------------------------------------- 271
           +TD LE+IV+KF S                                              
Sbjct: 143 DTDVLEMIVDKFGSSESPEVHANAAEILCTVARYAPPGLATKLSSPSCTGRLLKHTLEDS 202

Query: 272 --------SLNLLPSSLEP-RPTTGIAHAYNRQITHGSVTM--EVVEGMLESSGGMVKLL 283
                   SL++  S L+P R T G  H Y RQ+THGS+    E VEGML S G ++ LL
Sbjct: 203 RPKSVLVNSLSVCISLLDPKRFTLGTYHIYGRQLTHGSMVTNPETVEGMLGSLGDLLMLL 262

[Close]

BLAST of Sed0023225 vs. TAIR 10
Match: AT3G45190.1 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 107.5 bits (267), Expect = 2.9e-23
Identity = 74/229 (32.31%), Postives = 115/229 (50.22%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + LM RK +PLM   +++AHQ + ++LVDLIGITS ++VL+RL GAD+H+Y
Sbjct: 121 LAGYFSKVVICLMLRKTVPLMN--YVKAHQNVFQQLVDLIGITSIMEVLIRLVGADDHVY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFSSSLNL----------------LPSSL---------- 229
            ++ + M+W  +++ LE+IV+K S S +L                 PS L          
Sbjct: 181 PNHLDVMQWLADSNLLEMIVDKLSPSNSLEVHANAAETLCTIAQNAPSPLATKLSSSSFV 240

Query: 230 ---------EPRPTTGIAHAYN-----------------------RQITHG--SVTMEVV 279
                    +P+  + + H  +                       +QI     SV  E +
Sbjct: 241 ARIFGHAFEDPQSKSSLVHTLSVCISLLSPRRSVVSSPFMYSFRGQQIFESPISVNPETI 300

[Close]

BLAST of Sed0023225 vs. TAIR 10
Match: AT2G28360.1 (SIT4 phosphatase-associated family protein )

HSP 1 Score: 97.1 bits (240), Expect = 3.9e-20
Identity = 72/229 (31.44%), Postives = 109/229 (47.60%), Query Frame = 0


Query: 110 LINWFPFVPVTLMSRKRIPLMEHLHLQAHQAIVKKLVDLIGITSTLKVLVRLYGADEHLY 169
           L  +F  V + LM RK   LM   +++ H  +  +LVDLIGITS ++VLVRL GAD+H+Y
Sbjct: 121 LAGYFGKVVICLMIRKTSALMS--YIKGHGNVFSQLVDLIGITSIMEVLVRLVGADDHVY 180

Query: 170 SSYTESMKWTEETDFLEVIVEKFS------------------------------------ 229
            ++ + M++  ++D LE+IV+K +                                    
Sbjct: 181 PNFPDVMRYLADSDLLEMIVDKLNPSSPPEVQANAAETLCAITRNAPSALATKLSSPGFV 240

Query: 230 ------------------SSLNLLPSSLEPR---PTTGIAHAYNRQITHGS---VTMEVV 279
                              SL +  S L+PR    ++   ++Y  Q    S   VT E +
Sbjct: 241 SRIFGHAIEDSHSKSGLVHSLTVCISLLDPRRSGASSPFFNSYRGQNMFESPVPVTQETI 300

The following BLAST results are available for this feature:

BLAST of Sed0023225 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544148.1	3.1e-43	50.65	serine/threonine-protein phosphatase 6 regulatory subunit 2 [Cucurbita pepo subs...	[more]
KAG6581469.1	3.1e-43	50.65	Serine/threonine-protein phosphatase 6 regulatory subunit 2, partial [Cucurbita ...	[more]
XP_022926020.1	3.1e-43	50.65	serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X2 [Cucurbit...	[more]
XP_022926019.1	3.1e-43	50.65	serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1 [Cucurbit...	[more]
XP_022146511.1	6.8e-43	50.22	serine/threonine-protein phosphatase 6 regulatory subunit 2 [Momordica charantia...	[more]

BLAST of Sed0023225 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023225 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJU5	1.5e-43	50.65	serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X2 OS=Cucurb...	[more]
A0A6J1EDU6	1.5e-43	50.65	serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1 OS=Cucurb...	[more]
A0A6J1CZK7	3.3e-43	50.22	serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Momordica charant...	[more]
A0A6J1IIS2	4.3e-43	50.22	serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X1 OS=Cucurb...	[more]
A0A6J1IQ90	4.3e-43	50.22	serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X2 OS=Cucurb...	[more]

BLAST of Sed0023225 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30470.1	2.7e-37	41.91	SIT4 phosphatase-associated family protein	[more]
AT1G30470.2	2.7e-37	41.91	SIT4 phosphatase-associated family protein	[more]
AT1G30470.3	3.3e-35	36.20	SIT4 phosphatase-associated family protein	[more]
AT3G45190.1	2.9e-23	32.31	SIT4 phosphatase-associated family protein	[more]
AT2G28360.1	3.9e-20	31.44	SIT4 phosphatase-associated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007587	SIT4 phosphatase-associated protein family	PANTHER	PTHR12634	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	coord: 201..280
IPR007587	SIT4 phosphatase-associated protein family	PANTHER	PTHR12634	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	coord: 100..195
None	No IPR available	PANTHER	PTHR12634:SF28	BNAANNG11330D PROTEIN	coord: 100..195 coord: 201..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023225.1	Sed0023225.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043666	regulation of phosphoprotein phosphatase activity
molecular_function	GO:0019903	protein phosphatase binding