Sed0023214 (gene) Chayote v1

Overview


Name	Sed0023214
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin
Location	LG10: 7910197 .. 7912421 (-)
RNA-Seq Expression	Sed0023214
Synteny	Sed0023214

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTGTGGCAGTGATCAAAATCTGTACGTTTTTCTGAGAGAGATTCGTAAAAAGTAATGGCAGCAGCGACAACAGGAGAGGGACGAGTCATTCGCTGCAACACCATTGATTCGTGGAACCATCAAATGCAGAAGGGCAATGCCTCTCAGCAACTGGTAATTTTGAACACCCCATTTTCAATTTCAATTTCAATTTTATTCTAATTTTGTTGTATAACATCAACAATATCATAACCAATCAGTGGCCTTTTAGGGATTTCTGTTTTGGCATTGTTTGATTTGATCGTCTCATTGGTTTCAATGCCCTCTGCATAATCACTTGATTTGATCTGTTTCAAAATGGCATTGATTTGCTTGATGAACTCAACTTTTTTTTTTTTTTTTTTGATTTTGTGGTCTGGTAGAAAAAGTACTAATCAAAGTATGATATGTTTCGGATTTTTTCGTGCTTTCCTTTTCTTTATTAACATTCGGTGTCATTTTTTGTCTCCCACTTATTGCTTTCCGCATAAAACAAAAGTTGGATACATCTGTTGTAGTATATCTTAGTACATTAACATCATAATAGGGTGTTTGTTTGGGACGAAGAGAATCAGAATTATTATAACAACAATGAAAATTATAGAGACAATATACAAGAGCGATTATCCAGAAGAATAATTATATTTTTAGAGTGAATGAGGAGAATCTTTAAAAGGTAAAGAGAATAATTAAAAGAGAATAAAATAATAAATACGAAGAGAATGAAAAGTGATTATAAAAATACATCATCTTAAATAAGGATAAGAGAATCATTCTCCCATAATTATTCTCACCTTTTTGGCATAATCGCTCATATACAAAAACCAACCAATCCATGGCTAAATTTCACCACCATTCATTTTCTCACAAGAATAGAAGCAATTTACATGTAACAGGGACTCTTCTTTCTTTCTTTTTTTTGAAATTACAACAATCAGGGATAGAAAATTCGAACCCGTGGCCTCATAGATTATAAGCATACACTGATGTTATTGAGCTACTTCATGTACTTAACCAATTAGCATTCGTGTTATATAGTTGGATTTTGCTCATGAGTGTTGAAACTGATGCAGATAGTTGTGGATTTCACTGCATCATGGTGCGGTCCATGTCGGTTCATTGGACCTTTTCTGGACGAGCTTGCTCAGAAATTCCCTAGTGTCACATTTCTCAAGGTCGATGTGGATGATCTTCAGGTACTAAATATTATCATATTGAGAATATAATTAAATTTACTTCAATCCATTGTTTAAGTTTTTGGATTGATGAATGGTTTACTATAAATCAACATGGTATTGTGTTTAAGCTCTTATCGAGTTATTTCATTCCCAATTAATATTGATTTTTACTTGATGAACATTCTCAAAATTTCCAAACCCATAAGTGAGAAGACTGTTGGTTGATATAATTAAATTAACTTCAACTCATAAATTTAAGCTATTGGATTGATTGTTGATTTAACATAATTTTACCTATCATTTATAAGCCCCTCTATTACTTTTCTTTTAGTATGTAGCTTTTTGTTAAAAGGGAATTTACCATCAGCAGCACATTCTACCTTTTGTATTATATTTGTACCATAATTTTCAAAATAATTCATCTATAGTACATTGATCTCTATCACTCAACTAATAATAGAACTCAATTTGGATTTCTATCACTGATAGAAAATTCAAGCAGTGATAGAACTTGATTTGAATTTTCTACTATAAATGAATTAATTTTGATTTAGTGTTATAGATGTAAATATTTTGCCATTTTTTGTTATACATGCAAAATCCCCTTATTAAAATGTGTTTATTGTTGCAGTCGGTAGCTAAGGATTGGGGGGTGGAGGCAATGCCTACTTTCATGTTTCTGAAAGAGGGAAGAATTTTGGACAAAGTGATGGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATCGCTGCTACTGCTGCTGCTTGATAATCACACAGGATAATTGGGCTATGAAGTATGGATATATACAACTTATTATTACTATGAAATCGCTATAATTTTCTTTACTTGGCTACTATCTCCTAGCTGCTGGCTTGGTTGTTAGAACATGGTATATTCTTTCTTCTGAATGGCTTTTGTTGTTATCTTTCTTCTTACCATTGACATTGTTGCATTAGCTTAATTGAGAATTGGGAATTTGATATTCAATGAACCATGTTTGGACCTGTGAACA

mRNA sequence

CAAATTGTGGCAGTGATCAAAATCTGTACGTTTTTCTGAGAGAGATTCGTAAAAAGTAATGGCAGCAGCGACAACAGGAGAGGGACGAGTCATTCGCTGCAACACCATTGATTCGTGGAACCATCAAATGCAGAAGGGCAATGCCTCTCAGCAACTGATAGTTGTGGATTTCACTGCATCATGGTGCGGTCCATGTCGGTTCATTGGACCTTTTCTGGACGAGCTTGCTCAGAAATTCCCTAGTGTCACATTTCTCAAGGTCGATGTGGATGATCTTCAGTCGGTAGCTAAGGATTGGGGGGTGGAGGCAATGCCTACTTTCATGTTTCTGAAAGAGGGAAGAATTTTGGACAAAGTGATGGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATCGCTGCTACTGCTGCTGCTTGATAATCACACAGGATAATTGGGCTATGAAGTATGGATATATACAACTTATTATTACTATGAAATCGCTATAATTTTCTTTACTTGGCTACTATCTCCTAGCTGCTGGCTTGGTTGTTAGAACATGGTATATTCTTTCTTCTGAATGGCTTTTGTTGTTATCTTTCTTCTTACCATTGACATTGTTGCATTAGCTTAATTGAGAATTGGGAATTTGATATTCAATGAACCATGTTTGGACCTGTGAACA

Coding sequence (CDS)

ATGGCAGCAGCGACAACAGGAGAGGGACGAGTCATTCGCTGCAACACCATTGATTCGTGGAACCATCAAATGCAGAAGGGCAATGCCTCTCAGCAACTGATAGTTGTGGATTTCACTGCATCATGGTGCGGTCCATGTCGGTTCATTGGACCTTTTCTGGACGAGCTTGCTCAGAAATTCCCTAGTGTCACATTTCTCAAGGTCGATGTGGATGATCTTCAGTCGGTAGCTAAGGATTGGGGGGTGGAGGCAATGCCTACTTTCATGTTTCTGAAAGAGGGAAGAATTTTGGACAAAGTGATGGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATCGCTGCTACTGCTGCTGCTTGA

Protein sequence

MAAATTGEGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLKVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA

Homology

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BLAST of Sed0023214 vs. NCBI nr
Match: KAG6603933.1 (hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034113.1 hypothetical protein SDJN02_03840, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.0 bits (580), Expect = 4.3e-56
Identity = 106/115 (92.17%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EGRVIRCNTIDSWNHQ+QKGNASQ+LIVVDFTASWCGPCRFI PFLDELAQKFPSVTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           VDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH+AAT++A
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Sed0023214 vs. NCBI nr
Match: XP_022950147.1 (thioredoxin H-type-like [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 9.6e-56
Identity = 105/115 (91.30%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EGRVIRCNTIDSWNHQ+QKGNASQ+LIVVDFTASWCGPCRFI PFLDELAQKFPSVTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           VDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GA+KEELQQTVFKH+AAT++A
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Sed0023214 vs. NCBI nr
Match: XP_022977568.1 (thioredoxin H-type [Cucurbita maxima])

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 105/114 (92.11%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EGRVIRCNTIDSWNHQ+QKGNASQ+LIVVDFTASWCGPCRFI PFLDELAQKFPSVTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAA 122
           VDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH+AAT++
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of Sed0023214 vs. NCBI nr
Match: XP_023543830.1 (thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 105/115 (91.30%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EGRVI CNTIDSWNHQ+QKGNASQ+LIVVDFTASWCGPCRFI PFLDELAQKFPSVTFLK
Sbjct: 5   EGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           VDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH+AAT++A
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Sed0023214 vs. NCBI nr
Match: XP_023517738.1 (thioredoxin H-type [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 4.0e-54
Identity = 102/119 (85.71%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 4   ATTGEGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSV 63
           A   EGRVIRCNTIDSWNHQ+QKGNAS++LIVVDF+ASWCGPCRFI PFL++LAQKFP+V
Sbjct: 2   AAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTV 61

Query: 64  TFLKVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           TFLKVDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH++ATA+A
Sbjct: 62  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Sed0023214 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-44
Identity = 79/113 (69.91%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EG+VI C+T+++WN Q+QKGN ++ LIVVDFTASWCGPCRFI PFL ELA+K P+VTFLK
Sbjct: 5   EGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATA 121
           VDVD+L++VA +W VE+MPTFMFLKEG+I+DKV+GAKK+ELQQT+ KH+A  +
Sbjct: 65  VDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAS 117

[Close]

BLAST of Sed0023214 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.3e-43
Identity = 75/110 (68.18%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EG+VI C+T+++WN Q+QK N S+ L+VVDFTASWCGPCRFI PF  +LA+K P+V FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIA 118
           VD D+L+SVA DW ++AMPTFMFLKEG+ILDKV+GAKK+ELQ T+ KH+A
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Sed0023214 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 7.4e-43
Identity = 79/115 (68.70%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EG+VI  +T+D+WN  +QKG   ++LIVVDFTASWCGPC+FI  F  ELA+K P+VTFLK
Sbjct: 4   EGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLK 63

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           VDVD+L+SVA DW VEAMPTFMFLKEG+I+DKV+GAKK+ELQQT+ KHI++T+ A
Sbjct: 64  VDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTSTA 118

[Close]

BLAST of Sed0023214 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-37
Identity = 69/121 (57.02%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 3   AATTGEGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPS 62
           A ++ EG+V  C+ ++ WN   +KG  +++L+VVDFTASWCGPCRFI P L ++A+K P 
Sbjct: 6   ATSSEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPH 65

Query: 63  VTFLKVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIA-ATAA 122
           V FLKVDVD+L++V+ +W VEAMPTF+F+K+G+ +D+V+GAKKEELQQT+ KH A AT  
Sbjct: 66  VIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVT 125

[Close]

BLAST of Sed0023214 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.7e-35
Identity = 63/116 (54.31%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 7   GEGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFL 66
           GEG VI C+T++ WN +++  N S++LIV+DFTASWC PCRFI P   E+A+KF +V F 
Sbjct: 3   GEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFF 62

Query: 67  KVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           K+DVD+LQ+VA+++ VEAMPTF+F+KEG I+D+V+GA K+E+ + + KH    A+A
Sbjct: 63  KIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

[Close]

BLAST of Sed0023214 vs. ExPASy TrEMBL
Match: A0A6J1GE02 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.7e-56
Identity = 105/115 (91.30%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EGRVIRCNTIDSWNHQ+QKGNASQ+LIVVDFTASWCGPCRFI PFLDELAQKFPSVTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           VDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GA+KEELQQTVFKH+AAT++A
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Sed0023214 vs. ExPASy TrEMBL
Match: A0A6J1IQD5 (thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.1e-56
Identity = 105/114 (92.11%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EGRVIRCNTIDSWNHQ+QKGNASQ+LIVVDFTASWCGPCRFI PFLDELAQKFPSVTFLK
Sbjct: 5   EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAA 122
           VDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH+AAT++
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of Sed0023214 vs. ExPASy TrEMBL
Match: A0A6J1BTW6 (thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53
Identity = 101/114 (88.60%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EGRVIRCNT+D+WN Q+QKGN SQ+LIVVDFTASWCGPCRFIGPFLDELA K PSVTFLK
Sbjct: 5   EGRVIRCNTVDAWNQQIQKGNGSQELIVVDFTASWCGPCRFIGPFLDELAHKCPSVTFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAA 122
           VDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH+AATA+
Sbjct: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 118

[Close]

BLAST of Sed0023214 vs. ExPASy TrEMBL
Match: A0A6J1HER7 (thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53
Identity = 101/119 (84.87%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 4   ATTGEGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSV 63
           A   EGRVIRCNTIDSWN Q+QKGNAS++LIVVDF+ASWCGPCRFI PFL++LAQKFP+V
Sbjct: 2   AAAAEGRVIRCNTIDSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTV 61

Query: 64  TFLKVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           TFLKVDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH++ATA+A
Sbjct: 62  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Sed0023214 vs. ExPASy TrEMBL
Match: A0A6J1KSA6 (thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 100/119 (84.03%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 4   ATTGEGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSV 63
           A   EGRVIRCNTI SWN Q+QKGNAS++LIVVDF+ASWCGPCRFI PFL++LAQKFP+V
Sbjct: 2   AAAAEGRVIRCNTIGSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTV 61

Query: 64  TFLKVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           TFLKVDVDDL+SVAKDWGVEAMPTFMFLKEGRI+DKV+GAKKEELQQTVFKH++ATA+A
Sbjct: 62  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Sed0023214 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-44
Identity = 75/110 (68.18%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EG+VI C+T+++WN Q+QK N S+ L+VVDFTASWCGPCRFI PF  +LA+K P+V FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIA 118
           VD D+L+SVA DW ++AMPTFMFLKEG+ILDKV+GAKK+ELQ T+ KH+A
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Sed0023214 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 147.5 bits (371), Expect = 6.9e-36
Identity = 63/116 (54.31%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 7   GEGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFL 66
           GEG VI C+T++ WN +++  N S++LIV+DFTASWC PCRFI P   E+A+KF +V F 
Sbjct: 3   GEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFF 62

Query: 67  KVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           K+DVD+LQ+VA+++ VEAMPTF+F+KEG I+D+V+GA K+E+ + + KH    A+A
Sbjct: 63  KIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

[Close]

BLAST of Sed0023214 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKF-PSVTFL 67
           EG+VI C+T D W  Q+ K   S +LIV+DFTASWC PCR I P  ++LA+KF  S  F 
Sbjct: 5   EGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFF 64

Query: 68  KVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAA 122
           KVDVD+LQSVAK++GVEAMPTF+F+K G ++DK++GA KE+LQ  + KH   T A
Sbjct: 65  KVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

[Close]

BLAST of Sed0023214 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 132.5 bits (332), Expect = 2.3e-31
Identity = 59/115 (51.30%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 8   EGRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKFPSVTFLK 67
           EG VI C+T++ W  +++  N S++LIV+DFTA+WC PCRFI P   +LA+K   V F K
Sbjct: 4   EGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFK 63

Query: 68  VDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFKHIAATAAA 123
           VDVD+L +VA+++ V+AMPTF+F+KEG I + V+GA KEE+   + KH    AAA
Sbjct: 64  VDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]

BLAST of Sed0023214 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-25
Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 2   AAATTGE-GRVIRCNTIDSWNHQMQKGNASQQLIVVDFTASWCGPCRFIGPFLDELAQKF 61
           AA T  E  RV++ ++   W     +   S +L+VVDF+ASWCGPCR I P +  +A KF
Sbjct: 17  AAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKF 76

Query: 62  PSVTFLKVDVDDLQSVAKDWGVEAMPTFMFLKEGRILDKVMGAKKEELQQTVFK 115
             V F+K+DVD+L  VAK++ V AMPTF+ +K G+ +++++GAKK+EL++ V K
Sbjct: 77  NDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of Sed0023214 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603933.1	4.3e-56	92.17	hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950147.1	9.6e-56	91.30	thioredoxin H-type-like [Cucurbita moschata]	[more]
XP_022977568.1	1.3e-55	92.11	thioredoxin H-type [Cucurbita maxima]	[more]
XP_023543830.1	1.6e-55	91.30	thioredoxin H-type-like [Cucurbita pepo subsp. pepo]	[more]
XP_023517738.1	4.0e-54	85.71	thioredoxin H-type [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0023214 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	1.0e-44	69.91	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	3.3e-43	68.18	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q07090	7.4e-43	68.70	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P29449	2.7e-37	57.02	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	9.7e-35	54.31	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of Sed0023214 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE02	4.7e-56	91.30	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1	[more]
A0A6J1IQD5	6.1e-56	92.11	thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1	[more]
A0A6J1BTW6	1.3e-53	88.60	thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1	[more]
A0A6J1HER7	1.7e-53	84.87	thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1	[more]
A0A6J1KSA6	1.1e-52	84.03	thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 P...	[more]

BLAST of Sed0023214 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	2.4e-44	68.18	thioredoxin H-type 1	[more]
AT1G45145.1	6.9e-36	54.31	thioredoxin H-type 5	[more]
AT1G19730.1	1.3e-34	57.39	Thioredoxin superfamily protein	[more]
AT5G42980.1	2.3e-31	51.30	thioredoxin 3	[more]
AT5G39950.1	2.5e-25	45.61	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 81..92 score: 40.28 coord: 42..51 score: 59.89 coord: 34..42 score: 53.21
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..121 e-value: 7.9E-37 score: 127.9
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 8..118
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 8..118
None	No IPR available	CDD	cd02947	TRX_family	coord: 29..112 e-value: 3.7146E-35 score: 114.578
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 16..112 e-value: 4.1E-28 score: 97.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..117 score: 14.083647
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 35..53
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 9..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023214.1	Sed0023214.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity