Sed0023140 (gene) Chayote v1

Overview
NameSed0023140
Typegene
OrganismSechium edule (Chayote v1)
Descriptionpre-mRNA-splicing factor CWC22 homolog
LocationLG04: 37398081 .. 37404718 (+)
RNA-Seq ExpressionSed0023140
SyntenySed0023140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCTCGCCGGGAAAAGAGCTCCTCCGGCGAGATGTTCTCGTTTCCGAGCACTCCGGTCCAGGATCAGGATTCCGATTTCGAGTTCGGATCGATCACTCCCGATTCTCCTTCCACCTTCAACAACTCGCCGGCCGATCATCTGTTCTTGAACGGCCGTCTGTTGCCGCACTCCTTCCCGCCGCAGCCGATCGGAGTGTACATCGTGGATCGGACGAGCAGCGTCGGGAGCAAGGATTCGATCATGTCGTCGCGGAGTAACAGCACGAACAGCAGAAGCAGCAGCAGTTGCGGAAGCAGTACGAGCGCCAGAACGAGCTCTTCCAGCGATAACTACAATGTCGAGAGATCATCTTCCTCGCATCCGAAGAAATCGACGAAATCCTCTGTTTCGGCTCAGGTGTACGGATCGCGTCAGAGATGGCAGTTCATCGCGTCGGTGCCGGTGCCGGCGACGCTGAGCCGGGAGAATTCGAGGAAGAAGATTGGGGGAAAGTCGGATGGGAGGCGGAAGAAGAGGCGGACGGAGAAGGCGGCGGCGGCGAGGAAGAAGAAGAAAAAGAAGATGAATGTGTGGTTTGGAAGGAAGGTATTCCGGTGGATTATTCTGGTTTGTAAGGAATGCCATGCGATTGAGCCGTCGAGGAAGACGACGAAACCGACCAAGCAGAGGAGTTATTGAATGTTCATTATTCATTCATTTGAATTTGTTTATTTAATTTTCTTCTGGATTTTTCTTTTTTCTTGAATCGTTGGCGTTTTGATGATCATAATCATGGCGGTTGTTGATATGATCTGATCATCTCTGTTGAGTGGTGGTTAATAATGTAATGAGTTTATGGAATGAATCTGTTTGGTATCAATATGCAAAAAAAAAAAAAAAAATTCCAAAATGTAATACTGCTTTTCAAATGCTAGATCAAGTTACATCAGAGATAAGATAAACTCAAAGTAGCATATTAATAATAAAGGTAAATTATAAATTTAGTTCATGTGGTTAATTAAGAGAAAATTAGAATTAAGAATGGATTATTGATAATCATGTGCAAATTAAGTACATAACAATTAGTTATCATGCGTTAATATGGACAATGTATATTAAGTAGCTAATTGAATAATAAAAAAGGCAAAATCTAGATACGGAAAATACCTAGCTATTTGTGACTACAATAATGTCATATAACAAATATTGTAAGTATATTAAAAAAAATGCATTGAAAATTATATATCTAAGATGTGGCGTGACACATTAATATCTTATGGATAGTATATATTAGGTACTTCCTAAGTGTACCTAAATTTTCTTTAAAAAATGAGTTAAAATCAACAATTTAATAAAGTTTCTTTGAAAAGACAACTAAATTTTTATTTAATCAAACTATTTTAACTCACATTGTCCAAACAATACAAAACATTGTTTCATTTACACATAGATAACTATAGAATTCATTGATTTTTCTTTTATAAAAAAAACTATATAATCCATTGAAAATTTATAATATATATTTTTTTTTAAATAATTAATAATTATTTGATAATGTGAGCATCCATTCTAAAATTAATTGGTACGAAGATGAATAACTCACATATCTTTAAATTGATAAGACAGTCTTTTTCTACTTCGACTTAAGATCCTCATAAATAATAACACTAATAAGGACTAAACTCCACTTTTTCCCCTTTATTCCTTTTTTTATGTTTACTTATTAGGTTTGGACAGGCTTTAAGCTTAAGCTCTCTAACTAGATCCTTTCTTTCTCCACATGACATTTTTTTAGTCCAAAAACATCAAGTTGATTGGGATGTACTCAAGTTTTAGAATCACTAAAGTGAGCACTGGTTTTTTTTTCTTCTCTACCAACCACATAACAACCAAAGTGTTATGTAAATAAACAAATTAAAGAGAGAGGTACTTTGAGAAAACTTTAATAGTATATCAAAATGATAATTGATTGGGGCCTAACTATATGATATAAAATAATATGGTATTAACCAAGGGAAATCAATTAACTATATTTTAGGTTTTATAAAATTATTAGAACTAAATTCTAATTTTTGAAATTATATGAACTAAATTATAACTTTTTTCAAAGTATAGGAACTCAATTCTAACTTTCTTCAAATCATTGGGATTAAACTTTAATTATTTTTTTTAACTATGAGAACTATATTCTAAATTTCTTTAAACTACATGGACTAAACATTTTACCCATAAATAAATAATAAATAACAGTTTGTATATGATGATAAGGTAAGATTATAACTAATCCATGAGATGAAGCTTAAATTACAAGTTTGGATCTTGAAGTTACAAATTTGTCCTTAAAAACCTATTTGACATATGTGGTTGGAAAGGAAGGTTTTGTAGTGGATTATATTGGTTTGTAAGGATGAGATTAACCAACAATCAACTATTCTTGAGTCTTATGTGACTGTTCTATAAAATAAAAAGGAAAATATAATCAATTTATAGATGGATAATTAGAATAATGGTCCCTAACACATAGGGTAGTGATGATATTGATGAGGCTCAACATTTGGAAACCCATATGGGAGACAAACCTATTTTTCTAACCTTGATTTGTCCCAATGTTTATGCAAAGTAATGAAACTTAACCAAAATCATTTTTTTAAGTCTTTGAAGTGAGGCTTTCCTCACCCACAAAGGCTAAAGGGAATGCCCCTATGACCACCACATTCATTGGGTTTGTAAAAGCCCAAACAATCCAATATGCCATTACTTGAGTGTCTTTGATCCACTTTTTTTTCTTTTTTCTTTTTTTTTTTGTTTTAATCCACTTCTCTTCTAACCCCTTAAAAAAGGGTTATCTCTCTTTAATTTTGCTTTTAGTTTGGTATTAATTAAAAGATTGAACTTTGTTGGGAGTTGTGTACTTAGAAAAAGAACATGTGGGTCAAAAATTAAAGCTATATTCTTTGAAATGGAAGCAAAGAAGTTGGGTATGTATGTTAAGGGACGATATGAGAAAATAGTAGTGAAAATAGGATGGTTTGAAATTGCATGAGATGGAGTTTGAACTCATGAATTTTTAGTCATTGAATATGGTACATCGATTTTACTGAGTTACGATTTGAAATGTATATACTTATTTAAAAATTGGTGTTGAAATGAGAAGCAAACAAAAATCTTATTTGAAAATTGGTGTTTGAAGAGAGAATGGAAGTAAAAGTTTGTTTGAGATTTGGGGTTAAAAGTGATTGCTCGTTAAGAATTTTGTTTAGGGTTAGATGTTGGGGGGATAATGTTTTTTTCTATTTATTTTAACTATAATTGTTTCTTTTCATTATCATTTTTGTAATTGAATTTCAAAATTTTTAATTATTAAATTAAATTTAAATTATTCATTTTTAGTACACTAATTATCTTTTAATCCATGAATTTACTATAAAAATGAGTAATTTTGGGTCAATTTTTGCACGGAAAAAAATAAACACATAAATATTGGCTTGTTTGGCATATTTAGTTAGGAGTTAGTTTTAAGATTTATTTATTCTTCTCGAAAACCTACATCCAACCAAACGAGTTTTTATTAATTCATCTTCATTTTTACTTTTAAAAATAACTCTCATCTTTAATCATTCATTTATAATTACTCAATCATTTCTAACTCTATATTTTTAATCACTTCTTTCAAATCAATCAAAATAATTTATTTTTAATCATTTCTTTTTAACTACTAAAAATAACTACTCATTTTAAATGTACATAAAAAAAATAAAGTTTTAACTCTATCTCTTCTGTATAAAAACTACTTTCAAACAAGTTTTTTAAAAAACTCCCAATTTTTAATTATTCAATATAATTTTTTAACTCAAATATTACAAGTATGTCAAACACACAACCCCTATTTGTTTATTTCAAGTAATTTTATTAAATCAAAACATAAAGTACTTTACGTTCAATTTATAAAGTATATTTTTACCAAACTTAATTTAGCTGATATAGTCAACATGGTACTCTGGACTTAAAAGCTAGGGTGTTTGATTTTTTTTGTTTTTTTTTTTTTTTTTTTGGTGCTAGAATTTTTATGAAAAGTGTGAGAGCTATAAATGAAGTATTATAATTTCTCTTTAAAAAAACATATTCAAACGAGTTATTATTGTAACTAGTGAATTAATTACTCATTTTTAAATTCATTTTTAATCACTCATTTTTGTAACTCTTTTACAAAATTTACGTTCAAATGTGTTATTGGATACAACTCTTCTACAAAAATTCACATTCAAATAAGTTATTATTCATAATTTTTCATGCAACTACTTATCCAAATTCCCCTAAATATTTACTCAGTCTATGTAATAGTAATATAAAATTGATTTAAAATATTTATTTATTTATTCAAACCAATCCTAAAACTCTTTTGTTCCAAAAAAAAAAAAACTATTAGAGAGGACTACTTGTAGAGTAAACATTTAGGACCCATCAAAATTACTAATGTTGTCTTTTTTTTCTCATTACAAGACAGCACACAGCTAGAGAATAGCTTATGGGACAAAAACTCACTAGAGCTATAAAACCTTATCATATTTTTGTCCTCTTTTCATCTTTATTCAAAAAACCAATTTCTTGGTAAGAAAAATATTAAGAAGGTTATGATAAACCGTAGGTTATTATAAATGATTTTTGAGGGACAAGTTATTATAAAGAAATTATGATAAACGGTGTTTGAGGGGCTGGTTATGTAACAAAAAATAATATATGTAAAGTTTAAATAAACGACCGTAGGTTTAGATAAACGAGCACATAGGTTTAGACAAACGGATACGCAGGTTTAGGTAACCACCATTTATAATAAACGATGGGGTAAACATCGGTTGAGTTATTATAATCAACCAGCCCGTTTACATAAATGGGGCCCAAACATACCCTGAATGATTTAGTCATGGAAGGTGAAATAGTGTTTGAAATAAATTATCATCAAGTTAAGGTTAATAATAGGGTGAAAAGACAGATTCATTTTACCATCTTAGGCATGTCTTGGATTTCCCTATTTGACTTTTTCTTTTCTTTTTTTACAAAATTGAAAGTTTATTGTCCTAATTAGATATAAAATTGGATTCATAAATTTTTTTTAGTTCAACAAAGGGATGAAGCATCGGACCCTACAACTTTTTAGATGCAAAATTTTCTTAGATGAAAATGTTAAACATACATATTAGATGCAAAACTAAAACTATTAAATTTATTTAACATTTTCAAAGTTCTAAGTACCTAGTAGAAAAACTCTTTCTCAAAGAAAAACTATTAGAACGAAATTGAAAGTGATATATTTTAAGTCACCTACTAAACACAAATATAAAAGTTTATACACTAAATTTGTAAGTGGTCATATTTTTCTAAATTTCAACCCATTTGGATTAAGTGGGAACTGATTGGATTCTTTTGAGTATCAAGTTTTTTGGACTTCCTGATTTAAAAGATCTCCTAAGAGGGAAAAAATCTAATATTCTCATCAAATGAAATTTTATAAACATCATGATTGACTTAGTGGTTAAAAAAGTCTTGGACTATTAAAAAGTAGAATGTTCAATATATCGAAGAAACAAATATACAATTAAATATCTATAAATTAATGTTTCAAGTAAGTCTAGATTCCAAGACCTCGAAAGTAGAAACCGGAGTCTTCAACCAAATGGATCACCCCTCAAAAACAGCAAATACGCTCAAATATTAAAGTCATAAAACTTTTGATAAAATTGTTGTTGAAAGAAATCAATTTCTAAGTAAAATTAGTGTTAGAAGTGATGTAAGTAATTCAAATACGCTCAAATATTAAAGTCATAAAACTTTTGATAAAATTGTTGTTGAAAGAAATCAATTTGTAAGTAAAATTAGTGTTAGAAGAGATGTAAGTAATTCAAATACTTCGAAATTTAATGCATATTGACTAAATTTATCTGCAATATTTAATTGAAAAGACAAGTTGGACATAAAAGTCCAATCTCAATGGGAGACATGTTCCTTCTTATATGGTATAGCTTTGACCTAGTGAAACTATATTACAAGGGCCTGTCACTTCATTTTTTTAAGAATCTTGTATTATAAGTAAGAGTATTTAAATCAGCCACTAAAATTAAATCGTGAATTGAATTTTAGAGAGGAGAGCTTAGCACCATCAATATAAATCCAATAATTAAAGAGGTTACTGGTTCGAGTCCTCTCCCCCGCAATTATTCTAACCTCGAAAAAAATAAAATTAAACCATGAATTATGCTCTATTGATAAGAGGTATTTTTTACAAGAAAGAACATACAGATGTATCTACAAATATATTGTAGTAGATTGTACATGGTAAAAAATCGAGTCCAATCAAATTTGCTTGAAGGAAATAAGTACCTCATTTGGAGAACTATTTTTTTTATCATAATAGATATTATTAGCACTTTGACTACACTCATCAAGGCAACCGTCAAATTCTATAACATTTTCAAGCATACTCAGTAACTAAAATATCATTTGACAATGTTAAATTTTTTGGTTTTAAATTTGATTGTTATGGAGAACTGATAAGATATTGTGAGAAATGCATATATATAGATGAAACTACAAAGAAAAAAGCATCCAAGTACATGAAGAAACTAACTGAAATTAAAGAAAATAGCAGAAACAACTAG

mRNA sequence

ATGGAGTCTCGCCGGGAAAAGAGCTCCTCCGGCGAGATGTTCTCGTTTCCGAGCACTCCGGTCCAGGATCAGGATTCCGATTTCGAGTTCGGATCGATCACTCCCGATTCTCCTTCCACCTTCAACAACTCGCCGGCCGATCATCTGTTCTTGAACGGCCGTGTACGGATCGCGTCAGAGATGGCAGTTCATCGCGTCGGTGCCGGTGCCGGCGACGCTGAGCCGGGAGAATTCGAGGAAGAAGATTGGGGGAAAGTCGGATGGGAGGCGGAAGAAGAGGCGGACGGAGAAGGCGGCGGCGGCGAGGAAGAAGAAGAAAAAGAAGATGAATGTGTGGTTTGGAAGGAAGGTATTCCGGTGGATTATTCTGTTGGACATAAAAGTCCAATCTCAATGGGAGACATGTTCCTTCTTATATGGTATAGCTTTGACCTAGTGAAACTATATTACAAGGGCCTATATTGTGAGAAATGCATATATATAGATGAAACTACAAAGAAAAAAGCATCCAAGTACATGAAGAAACTAACTGAAATTAAAGAAAATAGCAGAAACAACTAG

Coding sequence (CDS)

ATGGAGTCTCGCCGGGAAAAGAGCTCCTCCGGCGAGATGTTCTCGTTTCCGAGCACTCCGGTCCAGGATCAGGATTCCGATTTCGAGTTCGGATCGATCACTCCCGATTCTCCTTCCACCTTCAACAACTCGCCGGCCGATCATCTGTTCTTGAACGGCCGTGTACGGATCGCGTCAGAGATGGCAGTTCATCGCGTCGGTGCCGGTGCCGGCGACGCTGAGCCGGGAGAATTCGAGGAAGAAGATTGGGGGAAAGTCGGATGGGAGGCGGAAGAAGAGGCGGACGGAGAAGGCGGCGGCGGCGAGGAAGAAGAAGAAAAAGAAGATGAATGTGTGGTTTGGAAGGAAGGTATTCCGGTGGATTATTCTGTTGGACATAAAAGTCCAATCTCAATGGGAGACATGTTCCTTCTTATATGGTATAGCTTTGACCTAGTGAAACTATATTACAAGGGCCTATATTGTGAGAAATGCATATATATAGATGAAACTACAAAGAAAAAAGCATCCAAGTACATGAAGAAACTAACTGAAATTAAAGAAAATAGCAGAAACAACTAG

Protein sequence

MESRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRVRIASEMAVHRVGAGAGDAEPGEFEEEDWGKVGWEAEEEADGEGGGGEEEEEKEDECVVWKEGIPVDYSVGHKSPISMGDMFLLIWYSFDLVKLYYKGLYCEKCIYIDETTKKKASKYMKKLTEIKENSRNN
Homology
[Close]
BLAST of Sed0023140 vs. NCBI nr
Match: XP_022139633.1 (uncharacterized protein LOC111010487 [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 9.9e-20
Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          ME+RREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 55

[Close]
BLAST of Sed0023140 vs. NCBI nr
Match: XP_038899281.1 (probable membrane-associated kinase regulator 1 [Benincasa hispida])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19
Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRREKSSSGE+FSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  MESRREKSSSGEIFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 55

[Close]
BLAST of Sed0023140 vs. NCBI nr
Match: XP_022941070.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata])

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 57

[Close]
BLAST of Sed0023140 vs. NCBI nr
Match: XP_023525336.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >KAG6607885.1 hypothetical protein SDJN03_01227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037411.1 hypothetical protein SDJN02_01037, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 57

[Close]
BLAST of Sed0023140 vs. NCBI nr
Match: XP_022981938.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima])

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 57

[Close]
BLAST of Sed0023140 vs. ExPASy TrEMBL
Match: A0A6J1CG39 (uncharacterized protein LOC111010487 OS=Momordica charantia OX=3673 GN=LOC111010487 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.8e-20
Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          ME+RREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  METRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 55

[Close]
BLAST of Sed0023140 vs. ExPASy TrEMBL
Match: A0A6J1J3G5 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480935 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.9e-18
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 57

[Close]
BLAST of Sed0023140 vs. ExPASy TrEMBL
Match: A0A6J1FSH9 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC111446467 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.9e-18
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPV--QDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRRE+SSSGE+FSFPSTPV  QDQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  MESRREQSSSGEIFSFPSTPVQDQDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 57

[Close]
BLAST of Sed0023140 vs. ExPASy TrEMBL
Match: A0A0A0L251 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631560 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPVQDQDSDFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRRE  SS E+FSFPSTPV DQDSDFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 3  MESRRENGSSAEIFSFPSTPVLDQDSDFEFGSITPDSPSTFNNSPADHLFVNGRL 57

[Close]
BLAST of Sed0023140 vs. ExPASy TrEMBL
Match: A0A5D3DWZ9 (Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001730 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 8.5e-17
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 1  MESRREKSSSGEMFSFPSTPVQDQDS-DFEFGSITPDSPSTFNNSPADHLFLNGRV 56
          MESRRE  SS E+FSFPSTPVQDQDS DFEFGSITPDSPSTFNNSPADHLF+NGR+
Sbjct: 1  MESRRENGSSAEIFSFPSTPVQDQDSDDFEFGSITPDSPSTFNNSPADHLFVNGRL 56

[Close]
BLAST of Sed0023140 vs. TAIR 10
Match: AT1G53163.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15250.1); Has 315 Blast hits to 216 proteins in 74 species: Archae - 0; Bacteria - 86; Metazoa - 43; Fungi - 52; Plants - 27; Viruses - 1; Other Eukaryotes - 106 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0 

Query: 2  ESRREKSSSGEMFSFPSTPVQDQ-DSDFEFGSITPDSPST---FNNSPADHLFLNGRV 56
          ++R+   +SGE  + P T ++    SDFEFGS+TP SPS      NSPADHLFLNGR+
Sbjct: 3  DNRKTTPNSGE--TKPETSLETSLSSDFEFGSLTPTSPSQDPFSENSPADHLFLNGRL 58

[Close]
BLAST of Sed0023140 vs. TAIR 10
Match: AT3G15250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits to 218 proteins in 63 species: Archae - 0; Bacteria - 22; Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 4.8e-04
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0 

Query: 18 STPVQDQDSDFEFGSITPDSPST---FNNSPADHLFLNGRV 56
          +T   +   +FEFGS+TP SPS      NSPADHLF NGR+
Sbjct: 7  TTNSDEPPPEFEFGSLTPTSPSQDSFSENSPADHLFFNGRL 47

The following BLAST results are available for this feature:
BLAST of Sed0023140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022139633.19.9e-2094.55uncharacterized protein LOC111010487 [Momordica charantia][more]
XP_038899281.11.3e-1994.55probable membrane-associated kinase regulator 1 [Benincasa hispida][more]
XP_022941070.11.2e-1789.47pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata][more]
XP_023525336.11.2e-1789.47pre-mRNA-splicing factor CWC22 homolog [Cucurbita pepo subsp. pepo] >KAG6607885.... [more]
XP_022981938.11.2e-1789.47pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima][more]
BLAST of Sed0023140 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0023140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CG394.8e-2094.55uncharacterized protein LOC111010487 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1J3G55.9e-1889.47pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114809... [more]
A0A6J1FSH95.9e-1889.47pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A0A0L2512.2e-1787.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631560 PE=4 SV=1[more]
A0A5D3DWZ98.5e-1787.50Putative membrane-associated kinase regulator 1 OS=Cucumis melo var. makuwa OX=1... [more]
BLAST of Sed0023140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53163.11.1e-0551.72unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15250.14.8e-0453.66unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0023140.1Sed0023140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0016310 phosphorylation
cellular_component GO:0005886 plasma membrane
molecular_function GO:0016301 kinase activity
molecular_function GO:0019210 kinase inhibitor activity