Sed0023105 (gene) Chayote v1

Overview


Name	Sed0023105
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAN GTPase-activating protein 1-like
Location	LG07: 3521893 .. 3524682 (-)
RNA-Seq Expression	Sed0023105
Synteny	Sed0023105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGTTTACAAAAGTGTTTGGATTCGATGACAGTTTCATCGTTTCCCCCCATACGATGTTTCTCTTTTCTCTACGATTACCCTTCGCCGATTTCTGTAAACCCTTCAAATTGTTGCATAAACCCTTACTGAGGAAAATCATTTTCAGTCCATTTTCCTTTTCTTCTCTCTTTCTAGGGCTCCGTTTCTGAGGATTTCACTCTTTTCCCAGGTATTTATTATCTATTTTCCTGCGATTTTTTAGGACGGGCTTTCTCTAATCAGTTCCTGTAAGATTTTATACCTTTTGCTGAAAAATTCATGGCATTTTGTCTTATTTATACAGGAAACTATGCAGTTTAATATCCCTTTATACTTATTGCATATGTAGTACTAACGCTTAGTATGGATATCAAATGGGTCATTTCTCATACTAATCACAGTGATACATTTTGGAGTTATGTCCAATTTATGATACTCTGAGAGTCTGATATGACTGTAGAAAGTTCAAAGCTAGGGATGGATGCCTTTCCATTTTGTTACTTTCTTTTTTTTTAAAAATCCTTATCACTTCCTTGAGTAATGGTAGTTGTAAAATCTGAAACTTTTGGCATTGCTATCAGCTATCAACTGCTCACAATGATAACCAACTGCCCATTTGGGCATTTTCTATCTTTCTTGGATACCCTGATTATACTCAAATTAAACTTCATGTCAAATGATATTGATTGCATGATGCTTGATTTCTCTCTCATTTGTATTTTACCCTAAATTCATTTTTTAATAGTTTTATTCATTGGGTACTTTGAAAGCGAGTGATACTTTTCTATTCTGCTATATTTGTCTGTAAATGGTATAAAATAGGTTGGTGACTGACTCTATTTGAAATGGTGAGATATAGTATCTGCTTGACAATCTTCTGTTAGGGGTAAGGTTGAGCTGGGAGATAAAGCCTGACTAAATTTTTTCCCTCTGAAGTCTGACCTTTGAATATTTTTCACTTTTACTTATTGTGGCTCGTTATACTGCAGATTGTTTTCCCATGGATTCTGCCACCCAGATGTTCCCACATCGGGTAGTGTCAATTAAATTATGGCCTCCAAGCCAGAGCACTAGGTTCATGCTTGTAGAACGAATCATCAAGAATCTTACAACACCCTCCATTTTTTCCCGGAAGTATGGCTTATTGAGTAAAGAAGAAGCCGAGGAGGATGCCAAGGAAGCAGAAGATATGGCTTTTGCGACGGCAAACCAACACTTCGAGAAGGAGCCAGATAGTGATGGAAGCTCTGCAATTCAAATTTATGCCAAAGAATCTAGTAGGCTTATGCTGGATATATTGAAAAGGGATTCTGGAGTAAAGAAGGATGGAGTGGCGATAATATCTGAGAAGTCTACTACTCAAGGAACTGTTTTTGATATATCCGGAGGACGAAGGGCGTTTTTTGATGCAGAGGAAGCTAATAAGCTTTTAGAACCTCTAAAAGATCCTGAAAACTTGTTTACTAAGATCTGCTTTAGTAATAGAAGTTTTGGCTTAGATGCTGCTCGTGTTGCTGAACCGTTCTTGTTGTCCATCAAAGATCGGTTGACAGTAGTTGACCTATCAGATTTCATTGCCGGAAGGTCAGAGGTGGAGGCTCTTGAAGTCATGAATATCTTTTCTTCAGCATTAGAGGGTTGTGACTTGAGGTCTCTGAACCTTTCAGACAATGCCATGGGTGAGAAGGGTATCCGGGCATTTGGCTCACTTTTGAGATCACAGAAAAATTTGGAGGAGCTTTATATGATGAATGATGGTATTTCAGAGGAAGCTGCAAGAGCAGTCTGTGAGTTGATTCCATCTACGGGCAAGCTTCGCGTCCTTCAGTTTCATAACAACATGACAGGAGATGAAGGCGCAATTGCGATTTCCGAAATTGTCAAGGGTTCTCCTGCATTGGAGGATTTCCGTTGTTCCTCGACTAGGGTAGGTTCCGATGGAGGGGTGGCACTAGCTGAAGCTATTGGGACTTGTACCAATCTCAAGAAGCTTGATTTGCGCGACAACATGTTTGGAGTGGAAGCTGGAATTGCTTTGAGTAAATCGATAACTGCCTTTCCAGGTTTAACTGAAATTTATCTTAGCTATTTGAACTTGGAGGATGAAGGAGCCGAAGCATTGGCCAACGCCCTTAAAGATTCCGCTCCATCCCTCGAAGTTTTTGGAATAGCCAGAAATGATATAACTGCTACAGGTGCTGCCTCAATTGCAGCCTGTGTAGCAACAAAACAATTCCTTCGTTAGTTATATTTGGCTGAGAATGAACTGAAAGATGATGGTGTGATATTGATCAGCAAGGCACTGCAGGATGAACATGATCAATTAAGCGAAGTCGACGTTAGTGCGAATTCAATTCGAAGGGCTGGGGCAAGATTCTTAGCTCAAATATTAGTGCAGAAGCGGGGATTTAAGTTGCTAAACATCAACAACAATTATATCTCAGAATAAGGAATCGACGAATTGAAGGAGATATTTAAAAATTCTCCCAGCATGCTCGGTCCTTTGGATGAGAATGATCCAGATGGAGAAGACTATGATGAAGATGCTGAAGAAAACGGCGATCACGATGATGAACTCGAATCGAAACTCAAGGGCCTCGACGTTAAACAAGAGGACTAAGAATTTCACAGGTCTGTTTGGATCAATATTTGATATTATCTGTTTTTGTTTCTGGCTTTTTTTGCTATCTTTTGTGGGTGAAATTAACAAATCCCCTTTTATTATATGTGGAAGGTTCAGACCAATATTCTTCTAGTTTAGAGAGTTTTG

mRNA sequence

TTAGTTTACAAAAGTGTTTGGATTCGATGACAGTTTCATCGTTTCCCCCCATACGATGTTTCTCTTTTCTCTACGATTACCCTTCGCCGATTTCTGTAAACCCTTCAAATTGTTGCATAAACCCTTACTGAGGAAAATCATTTTCAGTCCATTTTCCTTTTCTTCTCTCTTTCTAGGGCTCCGTTTCTGAGGATTTCACTCTTTTCCCAGATTGTTTTCCCATGGATTCTGCCACCCAGATGTTCCCACATCGGGTAGTGTCAATTAAATTATGGCCTCCAAGCCAGAGCACTAGGTTCATGCTTGTAGAACGAATCATCAAGAATCTTACAACACCCTCCATTTTTTCCCGGAAGTATGGCTTATTGAGTAAAGAAGAAGCCGAGGAGGATGCCAAGGAAGCAGAAGATATGGCTTTTGCGACGGCAAACCAACACTTCGAGAAGGAGCCAGATAGTGATGGAAGCTCTGCAATTCAAATTTATGCCAAAGAATCTAGTAGGCTTATGCTGGATATATTGAAAAGGGATTCTGGAGTAAAGAAGGATGGAGTGGCGATAATATCTGAGAAGTCTACTACTCAAGGAACTGTTTTTGATATATCCGGAGGACGAAGGGCGTTTTTTGATGCAGAGGAAGCTAATAAGCTTTTAGAACCTCTAAAAGATCCTGAAAACTTGTTTACTAAGATCTGCTTTAGTAATAGAAGTTTTGGCTTAGATGCTGCTCGTGTTGCTGAACCGTTCTTGTTGTCCATCAAAGATCGGTTGACAGTAGTTGACCTATCAGATTTCATTGCCGGAAGGTCAGAGGTGGAGGCTCTTGAAGTCATGAATATCTTTTCTTCAGCATTAGAGGGTTGTGACTTGAGGTCTCTGAACCTTTCAGACAATGCCATGGGTGAGAAGGGTATCCGGGCATTTGGCTCACTTTTGAGATCACAGAAAAATTTGGAGGAGCTTTATATGATGAATGATGGTATTTCAGAGGAAGCTGCAAGAGCAGTCTGTGAGTTGATTCCATCTACGGGCAAGCTTCGCGTCCTTCAGTTTCATAACAACATGACAGGAGATGAAGGCGCAATTGCGATTTCCGAAATTGTCAAGGGTTCTCCTGCATTGGAGGATTTCCGTTGTTCCTCGACTAGGGTAGGTTCCGATGGAGGGGTGGCACTAGCTGAAGCTATTGGGACTTGTACCAATCTCAAGAAGCTTGATTTGCGCGACAACATGTTTGGAGTGGAAGCTGGAATTGCTTTGAGTAAATCGATAACTGCCTTTCCAGGTTTAACTGAAATTTATCTTAGCTATTTGAACTTGGAGGATGAAGGAGCCGAAGCATTGGCCAACGCCCTTAAAGATTCCGCTCCATCCCTCGAAGTTTTTGGAATAGCCAGAAATGATATAACTGCTACAGGTGCTGCCTCAATTGCAGCCTGTGTAGCAACAAAACAATTCCTTCGTTAGTTATATTTGGCTGAGAATGAACTGAAAGATGATGGTGTGATATTGATCAGCAAGGCACTGCAGGATGAACATGATCAATTAAGCGAAGTCGACGTTAGTGCGAATTCAATTCGAAGGGCTGGGGCAAGATTCTTAGCTCAAATATTAGTGCAGAAGCGGGGATTTAAGTTGCTAAACATCAACAACAATTATATCTCAGAATAAGGAATCGACGAATTGAAGGAGATATTTAAAAATTCTCCCAGCATGCTCGGTCCTTTGGATGAGAATGATCCAGATGGAGAAGACTATGATGAAGATGCTGAAGAAAACGGCGATCACGATGATGAACTCGAATCGAAACTCAAGGGCCTCGACGTTAAACAAGAGGACTAAGAATTTCACAGGTCTGTTTGGATCAATATTTGATATTATCTGTTTTTGTTTCTGGCTTTTTTTGCTATCTTTTGTGGGTGAAATTAACAAATCCCCTTTTATTATATGTGGAAGGTTCAGACCAATATTCTTCTAGTTTAGAGAGTTTTG

Coding sequence (CDS)

ATGGATTCTGCCACCCAGATGTTCCCACATCGGGTAGTGTCAATTAAATTATGGCCTCCAAGCCAGAGCACTAGGTTCATGCTTGTAGAACGAATCATCAAGAATCTTACAACACCCTCCATTTTTTCCCGGAAGTATGGCTTATTGAGTAAAGAAGAAGCCGAGGAGGATGCCAAGGAAGCAGAAGATATGGCTTTTGCGACGGCAAACCAACACTTCGAGAAGGAGCCAGATAGTGATGGAAGCTCTGCAATTCAAATTTATGCCAAAGAATCTAGTAGGCTTATGCTGGATATATTGAAAAGGGATTCTGGAGTAAAGAAGGATGGAGTGGCGATAATATCTGAGAAGTCTACTACTCAAGGAACTGTTTTTGATATATCCGGAGGACGAAGGGCGTTTTTTGATGCAGAGGAAGCTAATAAGCTTTTAGAACCTCTAAAAGATCCTGAAAACTTGTTTACTAAGATCTGCTTTAGTAATAGAAGTTTTGGCTTAGATGCTGCTCGTGTTGCTGAACCGTTCTTGTTGTCCATCAAAGATCGGTTGACAGTAGTTGACCTATCAGATTTCATTGCCGGAAGGTCAGAGGTGGAGGCTCTTGAAGTCATGAATATCTTTTCTTCAGCATTAGAGGGTTGTGACTTGAGGTCTCTGAACCTTTCAGACAATGCCATGGGTGAGAAGGGTATCCGGGCATTTGGCTCACTTTTGAGATCACAGAAAAATTTGGAGGAGCTTTATATGATGAATGATGGTATTTCAGAGGAAGCTGCAAGAGCAGTCTGTGAGTTGATTCCATCTACGGGCAAGCTTCGCGTCCTTCAGTTTCATAACAACATGACAGGAGATGAAGGCGCAATTGCGATTTCCGAAATTGTCAAGGGTTCTCCTGCATTGGAGGATTTCCGTTGTTCCTCGACTAGGGTAGGTTCCGATGGAGGGGTGGCACTAGCTGAAGCTATTGGGACTTGTACCAATCTCAAGAAGCTTGATTTGCGCGACAACATGTTTGGAGTGGAAGCTGGAATTGCTTTGAGTAAATCGATAACTGCCTTTCCAGGTTTAACTGAAATTTATCTTAGCTATTTGAACTTGGAGGATGAAGGAGCCGAAGCATTGGCCAACGCCCTTAAAGATTCCGCTCCATCCCTCGAAGTTTTTGGAATAGCCAGAAATGATATAACTGCTACAGGTGCTGCCTCAATTGCAGCCTGTGTAGCAACAAAACAATTCCTTCGTTAG

Protein sequence

MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKEAEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTTQGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIKDRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRSQKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFLR

Homology

[Close]

BLAST of Sed0023105 vs. NCBI nr
Match: XP_023004254.1 (RAN GTPase-activating protein 1-like [Cucurbita maxima] >XP_023514749.1 RAN GTPase-activating protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 708.4 bits (1827), Expect = 3.7e-200
Identity = 365/413 (88.38%), Postives = 390/413 (94.43%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDSA Q FP RV+SIKLWPPSQSTRFML+ERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 1   MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   +K+DG AIISE++  
Sbjct: 61  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DAEEA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP L+SIK
Sbjct: 121 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGR E EALEV+NIFSSALEGCDLRSL+LS+NAMGEKG+RAFGSLL+S
Sbjct: 181 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QK+LEELY+MNDGISEEAARA+CELIPST KLR+LQFHNNMTGDEGAIAISEIVKGSPAL
Sbjct: 241 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT+LKKLDLRDNMFGVEAGIALSKSI+AFPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  +A NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. NCBI nr
Match: XP_038898694.1 (RAN GTPase-activating protein 1 [Benincasa hispida])

HSP 1 Score: 708.4 bits (1827), Expect = 3.7e-200
Identity = 366/413 (88.62%), Postives = 389/413 (94.19%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDS+TQ F  RV+SIKLWPPSQSTRFML+ERIIKNLTTPSIFSRKYGLLSKE+AEEDAK+
Sbjct: 1   MDSSTQTFQPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEDAEEDAKQ 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            EDMAFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   VK+DG  +ISEK+TT
Sbjct: 61  VEDMAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPRVKEDGEVLISEKATT 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DAEEA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP LLSIK
Sbjct: 121 RGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILLSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGRSE EAL+VMNIFS+ALEGCDLR L+LS+NAMGEKG+RAFGSLLRS
Sbjct: 181 DRLTEVDLSDFIAGRSEGEALQVMNIFSAALEGCDLRYLDLSNNAMGEKGVRAFGSLLRS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QKNLEELY+MNDGISEEAARAVCELIPST KLR+LQFHNNMTGDEGAIAISEIVKGSPAL
Sbjct: 241 QKNLEELYLMNDGISEEAARAVCELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIG CT LKKLDLRDNMFGVEAG+ALSKSI+AFPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGACTCLKKLDLRDNMFGVEAGMALSKSISAFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSL+V  +A NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLDVLEMAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. NCBI nr
Match: XP_022960216.1 (RAN GTPase-activating protein 1-like [Cucurbita moschata])

HSP 1 Score: 708.4 bits (1827), Expect = 3.7e-200
Identity = 365/413 (88.38%), Postives = 390/413 (94.43%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDSA Q FP RV+SIKLWPPSQSTRFML+ERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 1   MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   +K+DG AIISE++  
Sbjct: 61  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DAEEA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP L+SIK
Sbjct: 121 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGR E EALEV+NIFSSALEGCDLRSL+LS+NAMGEKG+RAFGSLL+S
Sbjct: 181 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QK+LEELY+MNDGISEEAARA+CELIPST KLR+LQFHNNMTGDEGAIAISEIVKGSPAL
Sbjct: 241 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT+LKKLDLRDNMFGVEAGIALSKSI+AFPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  +A NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. NCBI nr
Match: KAG6593086.1 (RAN GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 706.8 bits (1823), Expect = 1.1e-199
Identity = 363/413 (87.89%), Postives = 390/413 (94.43%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDSA Q FP RV+SIKLWPPSQSTRFML+ERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 24  MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 83

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   +K+DG AIISE++  
Sbjct: 84  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 143

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DAEEA +LLEPLKDP NLFTKICFSNRSFGLDAARVA+P L+SIK
Sbjct: 144 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAQPILMSIK 203

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGR E EALEV+NIFSSALEGCDLRSL+LS+NAMGEKG+RAFGSLL+S
Sbjct: 204 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 263

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QK+LEELY+MNDGISEEAARA+CELIPST KLR+LQFHNNMTGDEGAIAISEIVKGSPAL
Sbjct: 264 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 323

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT+LKKLDLRDNMFGVEAGIALSKS++AFPGLTEIY
Sbjct: 324 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSVSAFPGLTEIY 383

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  +A NDITA GAASIAACVATKQFL
Sbjct: 384 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFL 436

[Close]

BLAST of Sed0023105 vs. NCBI nr
Match: XP_008451278.1 (PREDICTED: RAN GTPase-activating protein 1 [Cucumis melo] >XP_008451279.1 PREDICTED: RAN GTPase-activating protein 1 [Cucumis melo])

HSP 1 Score: 706.4 bits (1822), Expect = 1.4e-199
Identity = 367/413 (88.86%), Postives = 387/413 (93.70%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDS+TQ F  RV+SIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 1   MDSSTQTFQPRVMSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKQ 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            EDMAFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   VK+DG  +ISEK  T
Sbjct: 61  VEDMAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPRVKEDGEVLISEKPAT 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DA+EA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP LLSIK
Sbjct: 121 RGTVFDISGGRRAFIDADEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILLSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGRSE +ALEVMNIFS+ALEGCDLR L+LS+NAMGEKG+RAFGSLLRS
Sbjct: 181 DRLTEVDLSDFIAGRSEGDALEVMNIFSAALEGCDLRYLDLSNNAMGEKGVRAFGSLLRS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QKNLEELY+MNDGISEEAARAV ELIPST KLR+LQFHNNMTGDEGA+AISEIVKGSPAL
Sbjct: 241 QKNLEELYLMNDGISEEAARAVRELIPSTDKLRILQFHNNMTGDEGAVAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT LKKLDLRDNMFGVEAGIALSKSI++FPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRDNMFGVEAGIALSKSISSFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  IA NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLEVLEIAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. ExPASy Swiss-Prot
Match: Q9LE82 (RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 5.1e-152
Identity = 278/413 (67.31%), Postives = 335/413 (81.11%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MD + +   +RV+S+K+WPPS+STR MLVER+ KN+TTPSIFSRKYGLLS EEAE+DAK 
Sbjct: 1   MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATAN+HF+ EPD DG+SA+ +YAKESS+LMLD++KR  G +++    +S+    
Sbjct: 61  IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKR--GPQEESEVEVSKDG-- 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
               FDISGG RAF + EEA  LL PL DP N +TKI FSNRSFG +AA+ A   L SIK
Sbjct: 121 -DVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           D+LT VDLSDF+AGR E EALEVMN+FSSALEG  LR LNLSDNA+GEKGIRAF SL+ S
Sbjct: 181 DQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNLSDNALGEKGIRAFASLINS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           Q +LEELY+MNDGISE+AARAV EL+PST K+RVLQFHNNMTGDEGA AI+EIV+  P+L
Sbjct: 241 QHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTR+GS+GGVALAEA+  C++LKKLDLRDNMFGVE GIAL+K+++    LTEIY
Sbjct: 301 EDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           +SYLNLEDEG EAL+ AL  SAPSLEV  +A NDIT     ++AAC+A+KQ L
Sbjct: 361 MSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSL 408

[Close]

BLAST of Sed0023105 vs. ExPASy Swiss-Prot
Match: Q9M651 (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 518.1 bits (1333), Expect = 9.3e-146
Identity = 266/406 (65.52%), Postives = 331/406 (81.53%), Query Frame = 0


Query: 9   PHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKEAEDMAFAT 68
           PH   SIKLWPPS  TR  L+ERI  N ++ +IF+ KYG L+K++A E+AK  ED+AF+T
Sbjct: 9   PH-AFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFST 68

Query: 69  ANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT-QGTVFDI 128
           ANQ FE+EPD DG SA+Q+YAKE S+L+L++LK+    K     +ISE S + + T FDI
Sbjct: 69  ANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSPRETFFDI 128

Query: 129 SGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIKDRLTVVD 188
           S G+RAF +AEEA +LL+PLK+P N +TKICFSNRSFGL AARVAEP L S+KD+L  VD
Sbjct: 129 SKGKRAFIEAEEAEELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQLKEVD 188

Query: 189 LSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRSQKNLEEL 248
           LSDF+AGR E+EALEVMNIFS AL+G  L SLNLSDNA+GEKG+RAFG+LL+S  +LEEL
Sbjct: 189 LSDFVAGRPELEALEVMNIFSDALQGSILSSLNLSDNALGEKGVRAFGALLKSLSSLEEL 248

Query: 249 YMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPALEDFRCSS 308
           Y+MNDGIS+EAA+AV ELIPST  LRVL FHNNMTGDEGA+AI+E+VK SP LE+FRCSS
Sbjct: 249 YLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSS 308

Query: 309 TRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIYLSYLNLE 368
           TRVGS GG+AL+EA+  CT+++KLDLRDNMFG EAG++LSK++++F  +TE+YLSYLNLE
Sbjct: 309 TRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLE 368

Query: 369 DEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           DEGA A+ NALK+SA  +EV  +A NDIT   A++IAACVA KQ L
Sbjct: 369 DEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDL 413

[Close]

BLAST of Sed0023105 vs. ExPASy Swiss-Prot
Match: O13066 (Ran GTPase-activating protein 1 OS=Xenopus laevis OX=8355 GN=rangap1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 8.7e-19
Identity = 80/292 (27.40%), Postives = 136/292 (46.58%), Query Frame = 0


Query: 137 AEEANKLLEPLKDPENLFTKICFSNRSFGLDAAR-VAEPFLLSIKDRLTVVDLSDFIAGR 196
           A++A +++  +++ E L   +     + G++AA+ +AE  +L  K  L     SD   GR
Sbjct: 35  AQDAEEVIREIEEYEGL-QALRLEGNTVGVEAAKAIAE--VLQRKPDLKRCHWSDMFTGR 94

Query: 197 SEVEALEVMNIFSSAL--EGCDLRSLNLSDNAMGEKGIRAFGSLLRSQK--NLEELYMMN 256
              E    +     AL   G  L  L+LSDNA G  G+R F +LL+S     L+EL + N
Sbjct: 95  LRPEIPTALRSLGDALITAGAQLTELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNN 154

Query: 257 DGISEEAARAVCELIPSTGK----------LRVLQFHNNMTGDEGAIAISEIVKGSPALE 316
            G+     + +   +    K          L+V     N   ++GA A+SE  +    LE
Sbjct: 155 CGMGIGGGKILAAALTECHKKSSAHGKPLALKVFIAGRNRLENDGATALSEAFRLIGTLE 214

Query: 317 DFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIYL 376
           +       +   G  ALAE+    + LK ++L DN F  + G+A+++++     +  I  
Sbjct: 215 EVHMPQNGINHAGITALAESFKANSLLKVINLNDNTFTEKGGVAMAEALKTLRQVEVINF 274

Query: 377 SYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
               +  +GA+A+A+ALK+    L+   ++  +I A  A S+A  V  K  L
Sbjct: 275 GDCLVRSKGAQAIASALKEGLHKLKDLNLSYCEIKADAAVSLAESVEDKSDL 323

[Close]

BLAST of Sed0023105 vs. ExPASy Swiss-Prot
Match: P46060 (Ran GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=RANGAP1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-16
Identity = 76/308 (24.68%), Postives = 135/308 (43.83%), Query Frame = 0


Query: 117 KSTTQGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFL 176
           K+   G      G       AE+A  +++ ++D ++L   +     + G++AARV     
Sbjct: 15  KTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSL-EALRLEGNTVGVEAARVIAK-A 74

Query: 177 LSIKDRLTVVDLSDFIAGRSEVEALEVMNIFSSAL--EGCDLRSLNLSDNAMGEKGIRAF 236
           L  K  L     SD   GR   E    +      L   G  L  L+LSDNA G  G++ F
Sbjct: 75  LEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGF 134

Query: 237 GSLLRSQK--NLEELYMMNDGISEEAARAVCELI-------PSTGK---LRVLQFHNNMT 296
            +LL+S     L+EL + N G+     + +   +        + GK   L+V     N  
Sbjct: 135 EALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRL 194

Query: 297 GDEGAIAISEIVKGSPALEDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEA 356
            ++GA A++E  +    LE+       +   G  ALA+A      L+ ++L DN F  + 
Sbjct: 195 ENDGATALAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKG 254

Query: 357 GIALSKSITAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAAS 411
            +A+++++     +  I      +  +GA A+A+A++   P L+   ++  +I    A +
Sbjct: 255 AVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALA 314

[Close]

BLAST of Sed0023105 vs. ExPASy Swiss-Prot
Match: Q7RTR2 (NLR family CARD domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NLRC3 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 4.1e-16
Identity = 70/259 (27.03%), Postives = 122/259 (47.10%), Query Frame = 0


Query: 162 RSFGLDAARVAEPFL------LSIKD-RLTVVDLSDFIAGRSEVEALEVMNIFSSALEGC 221
           R   LD  +  +P +      LS KD R+  + L++        +AL       S L   
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALA-----RSLLVNR 699

Query: 222 DLRSLNLSDNAMGEKGIRAFGSLLRSQKNLEELYMMNDGISEEAARAVCELIPSTGKLRV 281
            L SL+L  N++G +G +A    L+  + L  L +  + + ++ AR++ E + S   L +
Sbjct: 700 SLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSM 759

Query: 282 LQFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLR 341
           L    N  G  GA  +++ +K + +L++   SS  +G  G  ALAEA+     L+ LDL+
Sbjct: 760 LHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQ 819

Query: 342 DNMFGVEAGIALSKSITAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVFGIARND 401
            N        AL  ++     L  + L   ++  EGA+A+A+AL  ++ +L+   +  N 
Sbjct: 820 SNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANS-TLKNLDLTANL 879

Query: 402 ITATGAASIAACVATKQFL 414
           +   GA +IA  V   + L
Sbjct: 880 LHDQGARAIAVAVRENRTL 892

[Close]

BLAST of Sed0023105 vs. ExPASy TrEMBL
Match: A0A6J1KVR8 (RAN GTPase-activating protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497640 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.8e-200
Identity = 365/413 (88.38%), Postives = 390/413 (94.43%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDSA Q FP RV+SIKLWPPSQSTRFML+ERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 1   MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   +K+DG AIISE++  
Sbjct: 61  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DAEEA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP L+SIK
Sbjct: 121 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGR E EALEV+NIFSSALEGCDLRSL+LS+NAMGEKG+RAFGSLL+S
Sbjct: 181 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QK+LEELY+MNDGISEEAARA+CELIPST KLR+LQFHNNMTGDEGAIAISEIVKGSPAL
Sbjct: 241 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT+LKKLDLRDNMFGVEAGIALSKSI+AFPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  +A NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. ExPASy TrEMBL
Match: A0A6J1H710 (RAN GTPase-activating protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111461021 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.8e-200
Identity = 365/413 (88.38%), Postives = 390/413 (94.43%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDSA Q FP RV+SIKLWPPSQSTRFML+ERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 1   MDSAAQTFPPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEEAEEDAKK 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   +K+DG AIISE++  
Sbjct: 61  VEDIAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPVLKEDGEAIISERAAA 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DAEEA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP L+SIK
Sbjct: 121 KGTVFDISGGRRAFIDAEEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILMSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGR E EALEV+NIFSSALEGCDLRSL+LS+NAMGEKG+RAFGSLL+S
Sbjct: 181 DRLTEVDLSDFIAGRPEGEALEVVNIFSSALEGCDLRSLDLSNNAMGEKGVRAFGSLLKS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QK+LEELY+MNDGISEEAARA+CELIPST KLR+LQFHNNMTGDEGAIAISEIVKGSPAL
Sbjct: 241 QKHLEELYLMNDGISEEAARAICELIPSTDKLRILQFHNNMTGDEGAIAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT+LKKLDLRDNMFGVEAGIALSKSI+AFPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGTCTHLKKLDLRDNMFGVEAGIALSKSISAFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  +A NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLEVLEMAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. ExPASy TrEMBL
Match: A0A1S3BRW2 (RAN GTPase-activating protein 1 OS=Cucumis melo OX=3656 GN=LOC103492625 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 6.8e-200
Identity = 367/413 (88.86%), Postives = 387/413 (93.70%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDS+TQ F  RV+SIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 1   MDSSTQTFQPRVMSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKQ 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            EDMAFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   VK+DG  +ISEK  T
Sbjct: 61  VEDMAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPRVKEDGEVLISEKPAT 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DA+EA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP LLSIK
Sbjct: 121 RGTVFDISGGRRAFIDADEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILLSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGRSE +ALEVMNIFS+ALEGCDLR L+LS+NAMGEKG+RAFGSLLRS
Sbjct: 181 DRLTEVDLSDFIAGRSEGDALEVMNIFSAALEGCDLRYLDLSNNAMGEKGVRAFGSLLRS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QKNLEELY+MNDGISEEAARAV ELIPST KLR+LQFHNNMTGDEGA+AISEIVKGSPAL
Sbjct: 241 QKNLEELYLMNDGISEEAARAVRELIPSTDKLRILQFHNNMTGDEGAVAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT LKKLDLRDNMFGVEAGIALSKSI++FPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRDNMFGVEAGIALSKSISSFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  IA NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLEVLEIAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. ExPASy TrEMBL
Match: A0A5A7UUV6 (RAN GTPase-activating protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00610 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 6.8e-200
Identity = 367/413 (88.86%), Postives = 387/413 (93.70%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDS+TQ F  RV+SIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAK+
Sbjct: 1   MDSSTQTFQPRVMSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKQ 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            EDMAFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   VK+DG  +ISEK  T
Sbjct: 61  VEDMAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPRVKEDGEVLISEKPAT 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
           +GTVFDISGGRRAF DA+EA +LLEPLKDP NLFTKICFSNRSFGLDAARVAEP LLSIK
Sbjct: 121 RGTVFDISGGRRAFIDADEAKELLEPLKDPGNLFTKICFSNRSFGLDAARVAEPILLSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           DRLT VDLSDFIAGRSE +ALEVMNIFS+ALEGCDLR L+LS+NAMGEKG+RAFGSLLRS
Sbjct: 181 DRLTEVDLSDFIAGRSEGDALEVMNIFSAALEGCDLRYLDLSNNAMGEKGVRAFGSLLRS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           QKNLEELY+MNDGISEEAARAV ELIPST KLR+LQFHNNMTGDEGA+AISEIVKGSPAL
Sbjct: 241 QKNLEELYLMNDGISEEAARAVRELIPSTDKLRILQFHNNMTGDEGAVAISEIVKGSPAL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGS+GGVALAEAIGTCT LKKLDLRDNMFGVEAGIALSKSI++FPGLTEIY
Sbjct: 301 EDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRDNMFGVEAGIALSKSISSFPGLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANALKDSAPSLEV  IA NDITA GAASIAACVATKQFL
Sbjct: 361 LSYLNLEDEGAEALANALKDSAPSLEVLEIAGNDITAKGAASIAACVATKQFL 413

[Close]

BLAST of Sed0023105 vs. ExPASy TrEMBL
Match: A0A6J1DNI5 (RAN GTPase-activating protein 1-like OS=Momordica charantia OX=3673 GN=LOC111022864 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.9e-198
Identity = 364/413 (88.14%), Postives = 385/413 (93.22%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MDSATQ F  RV+SIKLWPPSQSTRFML+ERIIKNLTTPSIFSRKYGLLSKE+AE+DAK+
Sbjct: 25  MDSATQTFQPRVMSIKLWPPSQSTRFMLIERIIKNLTTPSIFSRKYGLLSKEDAEDDAKK 84

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            EDMAFATANQHFEKEPD DGSSA+QIYAKESSRLMLDILKR   VK+DG AIISEK+ T
Sbjct: 85  VEDMAFATANQHFEKEPDGDGSSAVQIYAKESSRLMLDILKRGPRVKEDGEAIISEKAIT 144

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
            GTVFDISGGRR+F DAEEA +LLEPLKD ENLFTKICFSNRSFGLDAARVAEP LLSIK
Sbjct: 145 PGTVFDISGGRRSFIDAEEAKELLEPLKDLENLFTKICFSNRSFGLDAARVAEPILLSIK 204

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           D+LT VDLSDFIAGRSE EALEVMNIFSSALEGCDLR LNLS+NAMGEKG+RAFGSLLRS
Sbjct: 205 DQLTEVDLSDFIAGRSEGEALEVMNIFSSALEGCDLRYLNLSNNAMGEKGVRAFGSLLRS 264

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
            +NLEELY+MNDGISEEAARAVCELIPST KLR+LQFHNNMTGDEGA+AISEIVKGSPAL
Sbjct: 265 LRNLEELYLMNDGISEEAARAVCELIPSTEKLRILQFHNNMTGDEGAVAISEIVKGSPAL 324

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTRVGSDGGVALAEA+G CT LKKLDLRDNMFGVEAGIALSKSI+AFP LTEIY
Sbjct: 325 EDFRCSSTRVGSDGGVALAEAVGMCTRLKKLDLRDNMFGVEAGIALSKSISAFPSLTEIY 384

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           LSYLNLEDEGAEALANAL+DSA SLEV  +A NDITA GAASIAACVATKQFL
Sbjct: 385 LSYLNLEDEGAEALANALEDSAASLEVLEMAGNDITAKGAASIAACVATKQFL 437

[Close]

BLAST of Sed0023105 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 538.9 bits (1387), Expect = 3.6e-153
Identity = 278/413 (67.31%), Postives = 335/413 (81.11%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MD + +   +RV+S+K+WPPS+STR MLVER+ KN+TTPSIFSRKYGLLS EEAE+DAK 
Sbjct: 1   MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATAN+HF+ EPD DG+SA+ +YAKESS+LMLD++KR  G +++    +S+    
Sbjct: 61  IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKR--GPQEESEVEVSKDG-- 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
               FDISGG RAF + EEA  LL PL DP N +TKI FSNRSFG +AA+ A   L SIK
Sbjct: 121 -DVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           D+LT VDLSDF+AGR E EALEVMN+FSSALEG  LR LNLSDNA+GEKGIRAF SL+ S
Sbjct: 181 DQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNLSDNALGEKGIRAFASLINS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           Q +LEELY+MNDGISE+AARAV EL+PST K+RVLQFHNNMTGDEGA AI+EIV+  P+L
Sbjct: 241 QHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTR+GS+GGVALAEA+  C++LKKLDLRDNMFGVE GIAL+K+++    LTEIY
Sbjct: 301 EDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           +SYLNLEDEG EAL+ AL  SAPSLEV  +A NDIT     ++AAC+A+KQ L
Sbjct: 361 MSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSL 408

[Close]

BLAST of Sed0023105 vs. TAIR 10
Match: AT3G63130.2 (RAN GTPase activating protein 1 )

HSP 1 Score: 538.9 bits (1387), Expect = 3.6e-153
Identity = 278/413 (67.31%), Postives = 335/413 (81.11%), Query Frame = 0


Query: 1   MDSATQMFPHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKE 60
           MD + +   +RV+S+K+WPPS+STR MLVER+ KN+TTPSIFSRKYGLLS EEAE+DAK 
Sbjct: 1   MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60

Query: 61  AEDMAFATANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT 120
            ED+AFATAN+HF+ EPD DG+SA+ +YAKESS+LMLD++KR  G +++    +S+    
Sbjct: 61  IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKR--GPQEESEVEVSKDG-- 120

Query: 121 QGTVFDISGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIK 180
               FDISGG RAF + EEA  LL PL DP N +TKI FSNRSFG +AA+ A   L SIK
Sbjct: 121 -DVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIK 180

Query: 181 DRLTVVDLSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRS 240
           D+LT VDLSDF+AGR E EALEVMN+FSSALEG  LR LNLSDNA+GEKGIRAF SL+ S
Sbjct: 181 DQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNLSDNALGEKGIRAFASLINS 240

Query: 241 QKNLEELYMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPAL 300
           Q +LEELY+MNDGISE+AARAV EL+PST K+RVLQFHNNMTGDEGA AI+EIV+  P+L
Sbjct: 241 QHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSL 300

Query: 301 EDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIY 360
           EDFRCSSTR+GS+GGVALAEA+  C++LKKLDLRDNMFGVE GIAL+K+++    LTEIY
Sbjct: 301 EDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIY 360

Query: 361 LSYLNLEDEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           +SYLNLEDEG EAL+ AL  SAPSLEV  +A NDIT     ++AAC+A+KQ L
Sbjct: 361 MSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSL 408

[Close]

BLAST of Sed0023105 vs. TAIR 10
Match: AT5G19320.1 (RAN GTPase activating protein 2 )

HSP 1 Score: 518.1 bits (1333), Expect = 6.6e-147
Identity = 266/406 (65.52%), Postives = 331/406 (81.53%), Query Frame = 0


Query: 9   PHRVVSIKLWPPSQSTRFMLVERIIKNLTTPSIFSRKYGLLSKEEAEEDAKEAEDMAFAT 68
           PH   SIKLWPPS  TR  L+ERI  N ++ +IF+ KYG L+K++A E+AK  ED+AF+T
Sbjct: 9   PH-AFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFST 68

Query: 69  ANQHFEKEPDSDGSSAIQIYAKESSRLMLDILKRDSGVKKDGVAIISEKSTT-QGTVFDI 128
           ANQ FE+EPD DG SA+Q+YAKE S+L+L++LK+    K     +ISE S + + T FDI
Sbjct: 69  ANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSPRETFFDI 128

Query: 129 SGGRRAFFDAEEANKLLEPLKDPENLFTKICFSNRSFGLDAARVAEPFLLSIKDRLTVVD 188
           S G+RAF +AEEA +LL+PLK+P N +TKICFSNRSFGL AARVAEP L S+KD+L  VD
Sbjct: 129 SKGKRAFIEAEEAEELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQLKEVD 188

Query: 189 LSDFIAGRSEVEALEVMNIFSSALEGCDLRSLNLSDNAMGEKGIRAFGSLLRSQKNLEEL 248
           LSDF+AGR E+EALEVMNIFS AL+G  L SLNLSDNA+GEKG+RAFG+LL+S  +LEEL
Sbjct: 189 LSDFVAGRPELEALEVMNIFSDALQGSILSSLNLSDNALGEKGVRAFGALLKSLSSLEEL 248

Query: 249 YMMNDGISEEAARAVCELIPSTGKLRVLQFHNNMTGDEGAIAISEIVKGSPALEDFRCSS 308
           Y+MNDGIS+EAA+AV ELIPST  LRVL FHNNMTGDEGA+AI+E+VK SP LE+FRCSS
Sbjct: 249 YLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSS 308

Query: 309 TRVGSDGGVALAEAIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIYLSYLNLE 368
           TRVGS GG+AL+EA+  CT+++KLDLRDNMFG EAG++LSK++++F  +TE+YLSYLNLE
Sbjct: 309 TRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLE 368

Query: 369 DEGAEALANALKDSAPSLEVFGIARNDITATGAASIAACVATKQFL 414
           DEGA A+ NALK+SA  +EV  +A NDIT   A++IAACVA KQ L
Sbjct: 369 DEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDL 413

[Close]

BLAST of Sed0023105 vs. TAIR 10
Match: AT1G10510.1 (RNI-like superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16
Identity = 51/198 (25.76%), Postives = 94/198 (47.47%), Query Frame = 0


Query: 216 LRSLNLSDNAMGEKGIRAFGSLLRSQKNLEELYMMNDGISEEAARAVCELIPSTGKLRVL 275
           +  ++ S N +   G++AF  +L+S   L+ L +  + I +E A+ +C  +     + +L
Sbjct: 200 VEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEIL 259

Query: 276 QFHNNMTGDEGAIAISEIVKGSPALEDFRCSSTRVGSDGGVALAEAIGTCTNLKKLDLRD 335
           Q ++   GDEGA  I+E++K +  L     ++  +   G  +LA A+     ++ L L  
Sbjct: 260 QLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNG 319

Query: 336 NMFGVEAGIALSKSITAFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVFGIARNDI 395
           N  G     AL+K +     L E++L   ++ DEG  AL   L      + +  +  N I
Sbjct: 320 NYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSI 379

Query: 396 TATGAASIAACVATKQFL 414
           +A GA  +A  +   + L
Sbjct: 380 SAKGAFYVAEYIKRSKSL 397

[Close]

BLAST of Sed0023105 vs. TAIR 10
Match: AT3G06000.1 (RNI-like superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 4.3e-13
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 321 AIGTCTNLKKLDLRDNMFGVEAGIALSKSITAFPGLTEIYLSYLNLEDEGAEALANALKD 380
           A  TCT++K             G+++SK  ++F  LT I LSY NLE+ GA AL NALK+
Sbjct: 16  AFETCTHIK------------VGVSMSKPFSSFSFLTVINLSYTNLENGGAIALVNALKN 75

Query: 381 SAPSLEVFGIARNDITATGAASIAACVATKQFLR 415
           SAPSL+V  +A N+IT   A +IA C+A K+ L+
Sbjct: 76  SAPSLQVIEMAGNNITYEAATAIAVCLAAKRHLK 97

The following BLAST results are available for this feature:

BLAST of Sed0023105 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004254.1	3.7e-200	88.38	RAN GTPase-activating protein 1-like [Cucurbita maxima] >XP_023514749.1 RAN GTPa...	[more]
XP_038898694.1	3.7e-200	88.62	RAN GTPase-activating protein 1 [Benincasa hispida]	[more]
XP_022960216.1	3.7e-200	88.38	RAN GTPase-activating protein 1-like [Cucurbita moschata]	[more]
KAG6593086.1	1.1e-199	87.89	RAN GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008451278.1	1.4e-199	88.86	PREDICTED: RAN GTPase-activating protein 1 [Cucumis melo] >XP_008451279.1 PREDIC...	[more]

BLAST of Sed0023105 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE82	5.1e-152	67.31	RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 ...	[more]
Q9M651	9.3e-146	65.52	RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 ...	[more]
O13066	8.7e-19	27.40	Ran GTPase-activating protein 1 OS=Xenopus laevis OX=8355 GN=rangap1 PE=1 SV=1	[more]
P46060	1.8e-16	24.68	Ran GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=RANGAP1 PE=1 SV=1	[more]
Q7RTR2	4.1e-16	27.03	NLR family CARD domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NLRC3 PE=...	[more]

BLAST of Sed0023105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KVR8	1.8e-200	88.38	RAN GTPase-activating protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497640...	[more]
A0A6J1H710	1.8e-200	88.38	RAN GTPase-activating protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114610...	[more]
A0A1S3BRW2	6.8e-200	88.86	RAN GTPase-activating protein 1 OS=Cucumis melo OX=3656 GN=LOC103492625 PE=4 SV=...	[more]
A0A5A7UUV6	6.8e-200	88.86	RAN GTPase-activating protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1DNI5	4.9e-198	88.14	RAN GTPase-activating protein 1-like OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Sed0023105 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63130.1	3.6e-153	67.31	RAN GTPase activating protein 1	[more]
AT3G63130.2	3.6e-153	67.31	RAN GTPase activating protein 1	[more]
AT5G19320.1	6.6e-147	65.52	RAN GTPase activating protein 2	[more]
AT1G10510.1	1.4e-16	25.76	RNI-like superfamily protein	[more]
AT3G06000.1	4.3e-13	45.74	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 51..71
None	No IPR available	SMART	SM00368	LRR_RI_2	coord: 382..409 e-value: 7.1 score: 11.1 coord: 325..352 e-value: 1.0 score: 17.1 coord: 297..324 e-value: 77.0 score: 3.8 coord: 269..296 e-value: 24.0 score: 7.4 coord: 353..380 e-value: 0.54 score: 19.0 coord: 241..268 e-value: 3.7 score: 13.1 coord: 213..240 e-value: 6.4E-4 score: 29.0
None	No IPR available	PANTHER	PTHR46761	RAN GTPASE-ACTIVATING PROTEIN 1	coord: 1..413
None	No IPR available	PANTHER	PTHR46761:SF5	RAN GTPASE-ACTIVATING PROTEIN 2	coord: 1..413
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 134..412
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 356..375 e-value: 0.096 score: 12.8 coord: 324..347 e-value: 0.11 score: 12.7 coord: 215..234 e-value: 0.16 score: 12.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 130..413 e-value: 1.3E-57 score: 197.0
IPR025265	WPP domain	PFAM	PF13943	WPP	coord: 14..108 e-value: 6.0E-34 score: 116.4
IPR038214	WPP domain superfamily	GENE3D	1.10.246.200	WPP domain	coord: 14..112 e-value: 6.5E-34 score: 118.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023105.1	Sed0023105.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding