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Sed0023029 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTTCGACGAACAAGTTTGAAGCTTTGGGTTTTGGCAGTGGCTCTGTTTTCTTGGCCAACATCCAACGGCCAGGTGGCTGTCCCCGCCCAGCTCTGCATCAGCGATTGCTCCACGTGTCCGGTGGTTTGCACGGCGGCAACGACAACAACACCACCTCCGGCGCTCCAATCGCCGCCGCGCAACTACATTCCGCCGCCCCCGCCGCCTGAATTTTACGGTGGGTATATGACGCCGTCGTCGTATTCTTTCTGGGCTCCGCCGCCGCCTCCGGTGGGGGTTTACTTTTCCGGTGCGCGACCGTCGGGGCAAATGCCGCGGACGGCGGGGCCGGGGGATTATTCTTATCCTTATTACTATTTTTACAGTTCGAATGGCGGTTGTTCGTTGTGTTCTGTTTCTGTGTTTGTTGTGTGTTTGTTTCATTTTGTTTTTCGATGGTGATGACAACAACGTGGGCGGATTTGTTGTCGTGGTTGCTTAAGGTTAGTTTTTTGAGAATGAGATGAATAGTTTCTGATAATTAATGTACTTTTTTTTTAATTTAACAATAATTGTTTAATTTTTGTTTATATTATTAATTGTGCTGTGCTCTAGCTGGACTTCACTTTTATTTTTTTGTTGCTAAAAATTAGTTAATAATCAATGTATTGTTTTTTTTTAATTTAGGGTAGTTATTACAAAACATCACTTACCACAATTTTTTTAAAAATTTCCTCCAACCAATTTATTGTAACATCTCAAAATTAGCTACTCGTTTTTGTAATCCATCTATGTAAACTCACATTCAAATGAATTATTGACAATAATTTTTTTTTTTTTGTAAAAATTCAAATTCCAATAAGTTATTCCCTTCAATTTTTCTACAAAAAGAAAAAAAAAATTGCATTTATTATAACCTTAATTTTTAATCACTAAAAAAAAAATCATTATAATCCCTCAAAATAATTTCTCATGCAATTATTCATCCAAACACATCTTCCTGATTTCGTATTTAGTTAGTAAAATTATTATTCATGATTTTTTATGTTGTTGGTCATTTGTTGTACAAAAAAACAAATTAACCGTCAATATAATTTGGGCTATTCAACTCAAACGGTAAAGCTGATTGAGTTGGATTATAATTTCTTTGGATTGATTATAATTTTTATTTTTATTTACTTCAATTAGATTATAATTTTATAATTTGAGGATGACAAATTTGTATTTTGTTCATTATTTCTCAATTTGAACTAAAAATAATATTATATATTATTATATATGCCTAAGATTAATAAATCATCTATGTCTTGCATATTGGTAGTGACACATGTATTAACAATATATATATTTTGGGTTTAGATATAATATGAATAAAATTTCCCTACACATGCATGTGTAGGAGAGCTCTATATTTTACACTATTAGTTGCCACAAATTTTTTTTTTTATAAATGAAAATATTAAAAAGTAATTGCAATTAATTTATTGACTAAGAATATATATTACAGAGTTTTTTTTTTTTAAAACAAACAATATATATTTAATATATAAGTTCTACTTCAGGGCGCTGTCCAAGGAAAGGAAAAAATAGGTGAGTTGGAAAGGTAAAATATGCATTACAAAAAATATATTATTAATTAAATTTAAAAAAAAAACACAGATTTATAAATACTTTAAACTATGGCTAAATATGTAATTATTTTTGTAAAAGTAGCTATTTACTACAATTTCCATAAAATAAAATAGGGAATTGGAATCGTGGATTATAAGGAAGGAATAACTGCCCCTTTTGTACTAAACATTTGACCATTCATGTTCAACTTAATATTTATGAAACTAGAAAATACTGATGTGCGTTGCACGTGTAAATACATGTATTAATAATTTTTGTTGGTAAAAATAATACTAAATAATAATATTAGTGTAAAAAAAAGAACTACTAATAAAAAGTAAAATAAGATGTTGGTTTTTTTGTTTATACTTTTTTATATATATTTGAATTAATATTGAATATATGAGTTAACATTTAATAAATTTTTAATATCAAAAGAGTTGGTGGGACGTTGGTTTATTTTTTTGGAGATAATCCAATTCAACACCATGATCATAGGTTAA ATGCCGTTTCGACGAACAAGTTTGAAGCTTTGGGTTTTGGCAGTGGCTCTGTTTTCTTGGCCAACATCCAACGGCCAGGTGGCTGTCCCCGCCCAGCTCTGCATCAGCGATTGCTCCACGTGTCCGGTGGTTTGCACGGCGGCAACGACAACAACACCACCTCCGGCGCTCCAATCGCCGCCGCGCAACTACATTCCGCCGCCCCCGCCGCCTGAATTTTACGGTGGGTATATGACGCCGTCGTCGTATTCTTTCTGGGCTCCGCCGCCGCCTCCGGTGGGGGTTTACTTTTCCGGTGCGCGACCGTCGGGGCAAATGCCGCGGACGGCGGGGCCGGGGGATTATTCTTATCCTTATTACTATTTTTACAGTTCGAATGGCGAGTTGGTGGGACGTTGGTTTATTTTTTTGGAGATAATCCAATTCAACACCATGATCATAGGTTAA ATGCCGTTTCGACGAACAAGTTTGAAGCTTTGGGTTTTGGCAGTGGCTCTGTTTTCTTGGCCAACATCCAACGGCCAGGTGGCTGTCCCCGCCCAGCTCTGCATCAGCGATTGCTCCACGTGTCCGGTGGTTTGCACGGCGGCAACGACAACAACACCACCTCCGGCGCTCCAATCGCCGCCGCGCAACTACATTCCGCCGCCCCCGCCGCCTGAATTTTACGGTGGGTATATGACGCCGTCGTCGTATTCTTTCTGGGCTCCGCCGCCGCCTCCGGTGGGGGTTTACTTTTCCGGTGCGCGACCGTCGGGGCAAATGCCGCGGACGGCGGGGCCGGGGGATTATTCTTATCCTTATTACTATTTTTACAGTTCGAATGGCGAGTTGGTGGGACGTTGGTTTATTTTTTTGGAGATAATCCAATTCAACACCATGATCATAGGTTAA MPFRRTSLKLWVLAVALFSWPTSNGQVAVPAQLCISDCSTCPVVCTAATTTTPPPALQSPPRNYIPPPPPPEFYGGYMTPSSYSFWAPPPPPVGVYFSGARPSGQMPRTAGPGDYSYPYYYFYSSNGELVGRWFIFLEIIQFNTMIIG Homology
BLAST of Sed0023029 vs. NCBI nr
Match: KAE8649911.1 (hypothetical protein Csa_012510 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 6.7e-27 Identity = 82/137 (59.85%), Postives = 92/137 (67.15%), Query Frame = 0
BLAST of Sed0023029 vs. NCBI nr
Match: XP_022981722.1 (leucine-rich repeat extensin-like protein 1 [Cucurbita maxima]) HSP 1 Score: 131.0 bits (328), Expect = 8.7e-27 Identity = 84/140 (60.00%), Postives = 93/140 (66.43%), Query Frame = 0
BLAST of Sed0023029 vs. NCBI nr
Match: KAG6608366.1 (Conserved oligomeric Golgi complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26 Identity = 82/135 (60.74%), Postives = 89/135 (65.93%), Query Frame = 0
BLAST of Sed0023029 vs. NCBI nr
Match: XP_022940707.1 (leucine-rich repeat extensin-like protein 2 [Cucurbita moschata]) HSP 1 Score: 125.9 bits (315), Expect = 2.8e-25 Identity = 81/140 (57.86%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of Sed0023029 vs. NCBI nr
Match: XP_023523402.1 (leucine-rich repeat extensin-like protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 119.0 bits (297), Expect = 3.4e-23 Identity = 74/125 (59.20%), Postives = 81/125 (64.80%), Query Frame = 0
BLAST of Sed0023029 vs. ExPASy TrEMBL
Match: A0A0A0L054 (Microtubule associated protein (Ase1) OS=Cucumis sativus OX=3659 GN=Csa_4G646240 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 3.2e-27 Identity = 82/137 (59.85%), Postives = 92/137 (67.15%), Query Frame = 0
BLAST of Sed0023029 vs. ExPASy TrEMBL
Match: A0A6J1IUS7 (leucine-rich repeat extensin-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111480787 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.2e-27 Identity = 84/140 (60.00%), Postives = 93/140 (66.43%), Query Frame = 0
BLAST of Sed0023029 vs. ExPASy TrEMBL
Match: A0A6J1FKD3 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111446222 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25 Identity = 81/140 (57.86%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of Sed0023029 vs. ExPASy TrEMBL
Match: A0A2N9HA71 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39158 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 7.5e-16 Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of Sed0023029 vs. ExPASy TrEMBL
Match: A0A6A1VUN3 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR4G020414 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12 Identity = 60/146 (41.10%), Postives = 75/146 (51.37%), Query Frame = 0
BLAST of Sed0023029 vs. TAIR 10
Match: AT5G11990.1 (proline-rich family protein ) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-06 Identity = 48/153 (31.37%), Postives = 65/153 (42.48%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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