Sed0022978 (gene) Chayote v1

Overview


Name	Sed0022978
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Beta-galactosidase
Location	LG13: 22344741 .. 22345216 (+)
RNA-Seq Expression	Sed0022978
Synteny	Sed0022978

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCTTTTACTTATGACCACAAAGCCTTAATCATCGATGACCGAAGGAGAATCTTGATTTCTGGTTCTACTCATTATCCAAGAAGCACACCCCAGGTTTGAATCTTTCAATGTGAATCATGGGTCTGTTTCTATTTCCCTTTTTAATCACTTTTTTTTTGTTATAGATGTGGCCTGACCTTATACAGAAGGCCAAAGATGGAGGGTTGGATGTTATTGAAACATATGTGTTCTGGAATGGCCATGAGCCTTCTCCTGGACAGGTAAAATGGAGAATATTCTATGACATTAATGATTTTGTTTTTGCCATTTGGGTCTTTCTGGGGTTTGGATTTTACTGATTTTTTGTGTTGTGTTGCAATTTTTTTCAGTTTTATTTTGAGGATAGATATGATTTGGTGAGATTTGTGAAGTTGGTTCAACGAGCAGGCTTGTTTGTTCATCTAAGGATTGGTCCTTATGTTTATGCTTAA

mRNA sequence

ATGGCCTCTTTTACTTATGACCACAAAGCCTTAATCATCGATGACCGAAGGAGAATCTTGATTTCTGGTTCTACTCATTATCCAAGAAGCACACCCCAGATGTGGCCTGACCTTATACAGAAGGCCAAAGATGGAGGGTTGGATGTTATTGAAACATATGTGTTCTGGAATGGCCATGAGCCTTCTCCTGGACAGTTTTATTTTGAGGATAGATATGATTTGGTGAGATTTGTGAAGTTGGTTCAACGAGCAGGCTTGTTTGTTCATCTAAGGATTGGTCCTTATGTTTATGCTTAA

Coding sequence (CDS)

ATGGCCTCTTTTACTTATGACCACAAAGCCTTAATCATCGATGACCGAAGGAGAATCTTGATTTCTGGTTCTACTCATTATCCAAGAAGCACACCCCAGATGTGGCCTGACCTTATACAGAAGGCCAAAGATGGAGGGTTGGATGTTATTGAAACATATGTGTTCTGGAATGGCCATGAGCCTTCTCCTGGACAGTTTTATTTTGAGGATAGATATGATTTGGTGAGATTTGTGAAGTTGGTTCAACGAGCAGGCTTGTTTGTTCATCTAAGGATTGGTCCTTATGTTTATGCTTAA

Protein sequence

MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEPSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA

Homology

[Close]

BLAST of Sed0022978 vs. NCBI nr
Match: XP_038879851.1 (beta-galactosidase-like [Benincasa hispida])

HSP 1 Score: 197.2 bits (500), Expect = 6.6e-47
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKA+IID RRRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 23  MASVTYDHKAIIIDGRRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 82

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 83  PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 120

[Close]

BLAST of Sed0022978 vs. NCBI nr
Match: XP_038879716.1 (beta-galactosidase-like [Benincasa hispida])

HSP 1 Score: 196.8 bits (499), Expect = 8.6e-47
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKA+IID RRRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 103 MASVTYDHKAVIIDGRRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 162

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 163 PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 200

[Close]

BLAST of Sed0022978 vs. NCBI nr
Match: TYK10094.1 (beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 89/98 (90.82%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1  MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
          MAS TYDHKAL+ID +RRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 1  MASVTYDHKALVIDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60

Query: 61 PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
          PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 61 PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 98

[Close]

BLAST of Sed0022978 vs. NCBI nr
Match: XP_008450854.1 (PREDICTED: beta-galactosidase [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 89/98 (90.82%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKAL+ID +RRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 23  MASVTYDHKALVIDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 82

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 83  PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 120

[Close]

BLAST of Sed0022978 vs. NCBI nr
Match: XP_022966884.1 (beta-galactosidase-like [Cucurbita maxima])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKALII+ RRRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 26  MASVTYDHKALIINGRRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 85

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 86  PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. ExPASy Swiss-Prot
Match: Q9SCV0 (Beta-galactosidase 12 OS=Arabidopsis thaliana OX=3702 GN=BGAL12 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-44
Identity = 79/97 (81.44%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           A  TYD KA+II+ +RRIL+SGS HYPRSTP+MWPDLIQKAKDGGLDVI+TYVFWNGHEP
Sbjct: 27  AIVTYDRKAVIINGQRRILLSGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 86

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPGQ+YFEDRYDLV+F+K+VQ+AGL+VHLRIGPYV A
Sbjct: 87  SPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. ExPASy Swiss-Prot
Match: P45582 (Beta-galactosidase OS=Asparagus officinalis OX=4686 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-44
Identity = 79/97 (81.44%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           AS TYDHK++II+ +RRILISGS HYPRSTP+MWPDLIQKAKDGGLDVI+TYVFWNGHEP
Sbjct: 25  ASVTYDHKSVIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 84

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPGQ+YF  RYDLVRF+KLV++AGL+ HLRIGPYV A
Sbjct: 85  SPGQYYFGGRYDLVRFLKLVKQAGLYAHLRIGPYVCA 121

[Close]

BLAST of Sed0022978 vs. ExPASy Swiss-Prot
Match: P48981 (Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-44
Identity = 78/97 (80.41%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           AS +YDHKA+II+ ++RILISGS HYPRSTP+MWPDLIQKAKDGGLDVI+TYVFWNGHEP
Sbjct: 24  ASVSYDHKAIIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 83

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPG +YFE+RYDLV+F+KLVQ+ GLFV+LRIGPYV A
Sbjct: 84  SPGNYYFEERYDLVKFIKLVQQEGLFVNLRIGPYVCA 120

[Close]

BLAST of Sed0022978 vs. ExPASy Swiss-Prot
Match: Q8W0A1 (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-42
Identity = 74/97 (76.29%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           A+ TYD KA++++ +RRILISGS HYPRSTP+MWPDLI+KAKDGGLDV++TYVFWNGHEP
Sbjct: 24  AAVTYDRKAVVVNGQRRILISGSIHYPRSTPEMWPDLIEKAKDGGLDVVQTYVFWNGHEP 83

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPGQ+YFE RYDLV F+KLV++AGL+V+LRIGPYV A
Sbjct: 84  SPGQYYFEGRYDLVHFIKLVKQAGLYVNLRIGPYVCA 120

[Close]

BLAST of Sed0022978 vs. ExPASy Swiss-Prot
Match: Q5Z7L0 (Beta-galactosidase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0573600 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-42
Identity = 77/97 (79.38%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           A+ TYDH++L I+ +RRILISGS HYPRSTP+MWPDLIQKAKDGGLDVI+TYVFWNGHEP
Sbjct: 20  AAVTYDHRSLTINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 79

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
             GQ+YF DRYDLVRFVKLV++AGL+V+LRIGPYV A
Sbjct: 80  VQGQYYFSDRYDLVRFVKLVKQAGLYVNLRIGPYVCA 116

[Close]

BLAST of Sed0022978 vs. ExPASy TrEMBL
Match: A0A5D3CFV7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002350 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 89/98 (90.82%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1  MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
          MAS TYDHKAL+ID +RRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 1  MASVTYDHKALVIDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60

Query: 61 PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
          PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 61 PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 98

[Close]

BLAST of Sed0022978 vs. ExPASy TrEMBL
Match: A0A1S3BQ54 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492323 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 89/98 (90.82%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKAL+ID +RRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 23  MASVTYDHKALVIDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 82

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 83  PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 120

[Close]

BLAST of Sed0022978 vs. ExPASy TrEMBL
Match: A0A6J1HV39 (Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111466450 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.1e-47
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKALII+ RRRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 26  MASVTYDHKALIINGRRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 85

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 86  PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. ExPASy TrEMBL
Match: A0A6J1EFM6 (Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111433680 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.1e-47
Identity = 90/98 (91.84%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKALII+ RRRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 26  MASVTYDHKALIINGRRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 85

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRYDLVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 86  PSPGQYYFEDRYDLVRFVKLVQQAGLYVHLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. ExPASy TrEMBL
Match: A0A0A0LYV5 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G587990 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 88/98 (89.80%), Postives = 94/98 (95.92%), Query Frame = 0


Query: 1   MASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 60
           MAS TYDHKAL+ID +RRILISGS HYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE
Sbjct: 23  MASVTYDHKALVIDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHE 82

Query: 61  PSPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PSPGQ+YFEDRY+LVRFVKLVQ+AGL+VHLRIGPYV A
Sbjct: 83  PSPGQYYFEDRYELVRFVKLVQQAGLYVHLRIGPYVCA 120

[Close]

BLAST of Sed0022978 vs. TAIR 10
Match: AT4G26140.1 (beta-galactosidase 12 )

HSP 1 Score: 180.3 bits (456), Expect = 7.7e-46
Identity = 79/97 (81.44%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           A  TYD KA+II+ +RRIL+SGS HYPRSTP+MWPDLIQKAKDGGLDVI+TYVFWNGHEP
Sbjct: 27  AIVTYDRKAVIINGQRRILLSGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 86

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPGQ+YFEDRYDLV+F+K+VQ+AGL+VHLRIGPYV A
Sbjct: 87  SPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. TAIR 10
Match: AT4G26140.2 (beta-galactosidase 12 )

HSP 1 Score: 180.3 bits (456), Expect = 7.7e-46
Identity = 79/97 (81.44%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           A  TYD KA+II+ +RRIL+SGS HYPRSTP+MWPDLIQKAKDGGLDVI+TYVFWNGHEP
Sbjct: 27  AIVTYDRKAVIINGQRRILLSGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 86

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPGQ+YFEDRYDLV+F+K+VQ+AGL+VHLRIGPYV A
Sbjct: 87  SPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. TAIR 10
Match: AT3G52840.1 (beta-galactosidase 2 )

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-43
Identity = 76/97 (78.35%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           A  TYDHKALII+ +RRILISGS HYPRSTP+MWPDLI+KAK+GGLDVI+TYVFWNGHEP
Sbjct: 27  AVVTYDHKALIINGQRRILISGSIHYPRSTPEMWPDLIKKAKEGGLDVIQTYVFWNGHEP 86

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPG +YF+DRYDLV+F KLV +AGL++ LRIGPYV A
Sbjct: 87  SPGNYYFQDRYDLVKFTKLVHQAGLYLDLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. TAIR 10
Match: AT5G56870.1 (beta-galactosidase 4 )

HSP 1 Score: 171.8 bits (434), Expect = 2.8e-43
Identity = 76/97 (78.35%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 2   ASFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEP 61
           AS +YD KA+II+ +RRIL+SGS HYPRSTP+MWP LIQKAK+GGLDVIETYVFWNGHEP
Sbjct: 27  ASVSYDRKAVIINGQRRILLSGSIHYPRSTPEMWPGLIQKAKEGGLDVIETYVFWNGHEP 86

Query: 62  SPGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           SPGQ+YF DRYDLV+F+KLV +AGL+V+LRIGPYV A
Sbjct: 87  SPGQYYFGDRYDLVKFIKLVHQAGLYVNLRIGPYVCA 123

[Close]

BLAST of Sed0022978 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 )

HSP 1 Score: 167.5 bits (423), Expect = 5.2e-42
Identity = 72/96 (75.00%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 3   SFTYDHKALIIDDRRRILISGSTHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEPS 62
           S +YD +A+ I+ +RRILISGS HYPRSTP+MWPDLI+KAK+GGLDVI+TYVFWNGHEPS
Sbjct: 33  SVSYDSRAITINGKRRILISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQTYVFWNGHEPS 92

Query: 63  PGQFYFEDRYDLVRFVKLVQRAGLFVHLRIGPYVYA 99
           PG++YFE  YDLV+FVKLVQ++GL++HLRIGPYV A
Sbjct: 93  PGKYYFEGNYDLVKFVKLVQQSGLYLHLRIGPYVCA 128

The following BLAST results are available for this feature:

BLAST of Sed0022978 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879851.1	6.6e-47	91.84	beta-galactosidase-like [Benincasa hispida]	[more]
XP_038879716.1	8.6e-47	91.84	beta-galactosidase-like [Benincasa hispida]	[more]
TYK10094.1	1.1e-46	90.82	beta-galactosidase [Cucumis melo var. makuwa]	[more]
XP_008450854.1	1.1e-46	90.82	PREDICTED: beta-galactosidase [Cucumis melo]	[more]
XP_022966884.1	1.5e-46	91.84	beta-galactosidase-like [Cucurbita maxima]	[more]

BLAST of Sed0022978 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCV0	1.1e-44	81.44	Beta-galactosidase 12 OS=Arabidopsis thaliana OX=3702 GN=BGAL12 PE=2 SV=1	[more]
P45582	4.1e-44	81.44	Beta-galactosidase OS=Asparagus officinalis OX=4686 PE=2 SV=1	[more]
P48981	4.1e-44	80.41	Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1	[more]
Q8W0A1	1.3e-42	76.29	Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE...	[more]
Q5Z7L0	1.3e-42	79.38	Beta-galactosidase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0573600 PE...	[more]

BLAST of Sed0022978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFV7	5.4e-47	90.82	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00...	[more]
A0A1S3BQ54	5.4e-47	90.82	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492323 PE=3 SV=1	[more]
A0A6J1HV39	7.1e-47	91.84	Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111466450 PE=3 SV=1	[more]
A0A6J1EFM6	7.1e-47	91.84	Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111433680 PE=3 SV=1	[more]
A0A0A0LYV5	1.6e-46	89.80	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G587990 PE=3 SV=1	[more]

BLAST of Sed0022978 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26140.1	7.7e-46	81.44	beta-galactosidase 12	[more]
AT4G26140.2	7.7e-46	81.44	beta-galactosidase 12	[more]
AT3G52840.1	1.6e-43	78.35	beta-galactosidase 2	[more]
AT5G56870.1	2.8e-43	78.35	beta-galactosidase 4	[more]
AT3G13750.1	5.2e-42	75.00	beta galactosidase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001944	Glycoside hydrolase, family 35	PRINTS	PR00742	GLHYDRLASE35	coord: 14..31 score: 61.76 coord: 35..53 score: 70.28 coord: 90..98 score: 35.0
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 2..98
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..98 e-value: 7.1E-44 score: 152.4
None	No IPR available	PANTHER	PTHR23421:SF164	BETA-GALACTOSIDASE	coord: 2..98
IPR031330	Glycoside hydrolase 35, catalytic domain	PFAM	PF01301	Glyco_hydro_35	coord: 11..98 e-value: 2.0E-36 score: 126.2
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022978.1	Sed0022978.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds