Sed0022895 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTAATAATCCCCTTTCTCAGGACCTTTCATTTGGAATTTCTTTTTCTAAATGGAGAAAGAAAGTTGCAAAGAAGACAAGTTTGAGATTTTAGTGTCCACTTGGGAGTTAAGGTTGCTGTTGCCGAGTTCTTGTTTACAACGGGAGGAAGAAGAAAATCGAGACGATGATTTAGTGAAGACTCCGAGATCTTTGGAACCTACGACGAGTCTAAAGTGTCCATCGCCACCGAGAAAACCGAAGAGGTTGCCATCGGCGAAACGGAAGGCAAGCGACGGGCGGGCAGTTTTGATGTCACATGATTATCTATTCGGGCAAATGGGGTTGGATTTGGAGTTGCTATTCCCTTCCAATCTTCTTGGCGGTAAGATTGTTAAGAAGGTTAAACGATTGGAGTGATGTGAAGTTGCGAAGTTTCTTTTCAATTTGGTGTAGTTTTTTCTTTGATGTAATTTTAAATATTTTAATGTATGTGTCATATTTATTCTTATCATCAATTGGTGATGAGTTTGAAGCTTCCTGATTTTACTTACTTCAG ATGGCCTAATAATCCCCTTTCTCAGGACCTTTCATTTGGAATTTCTTTTTCTAAATGGAGAAAGAAAGTTGCAAAGAAGACAAGTTTGAGATTTTAGTGTCCACTTGGGAGTTAAGGTTGCTGTTGCCGAGTTCTTGTTTACAACGGGAGGAAGAAGAAAATCGAGACGATGATTTAGTGAAGACTCCGAGATCTTTGGAACCTACGACGAGTCTAAAGTGTCCATCGCCACCGAGAAAACCGAAGAGGTTGCCATCGGCGAAACGGAAGGCAAGCGACGGGCGGGCAGTTTTGATGTCACATGATTATCTATTCGGGCAAATGGGGTTGGATTTGGAGTTGCTATTCCCTTCCAATCTTCTTGGCGGTAAGATTGTTAAGAAGGTTAAACGATTGGAGTGATGTGAAGTTGCGAAGTTTCTTTTCAATTTGGTGTAGTTTTTTCTTTGATGTAATTTTAAATATTTTAATGTATGTGTCATATTTATTCTTATCATCAATTGGTGATGAGTTTGAAGCTTCCTGATTTTACTTACTTCAG ATGGAGAAAGAAAGTTGCAAAGAAGACAAGTTTGAGATTTTAGTGTCCACTTGGGAGTTAAGGTTGCTGTTGCCGAGTTCTTGTTTACAACGGGAGGAAGAAGAAAATCGAGACGATGATTTAGTGAAGACTCCGAGATCTTTGGAACCTACGACGAGTCTAAAGTGTCCATCGCCACCGAGAAAACCGAAGAGGTTGCCATCGGCGAAACGGAAGGCAAGCGACGGGCGGGCAGTTTTGATGTCACATGATTATCTATTCGGGCAAATGGGGTTGGATTTGGAGTTGCTATTCCCTTCCAATCTTCTTGGCGGTAAGATTGTTAAGAAGGTTAAACGATTGGAGTGA MEKESCKEDKFEILVSTWELRLLLPSSCLQREEEENRDDDLVKTPRSLEPTTSLKCPSPPRKPKRLPSAKRKASDGRAVLMSHDYLFGQMGLDLELLFPSNLLGGKIVKKVKRLE Homology
BLAST of Sed0022895 vs. NCBI nr
Match: XP_022947800.1 (cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of Sed0022895 vs. NCBI nr
Match: XP_023006801.1 (cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima]) HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28 Identity = 76/117 (64.96%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of Sed0022895 vs. NCBI nr
Match: KAG6605463.1 (hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.7 bits (335), Expect = 1.0e-27 Identity = 75/113 (66.37%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Sed0022895 vs. NCBI nr
Match: XP_023532326.1 (cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27 Identity = 73/112 (65.18%), Postives = 86/112 (76.79%), Query Frame = 0
BLAST of Sed0022895 vs. NCBI nr
Match: KAG6570710.1 (hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121.3 bits (303), Expect = 5.4e-24 Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 0
BLAST of Sed0022895 vs. ExPASy TrEMBL
Match: A0A6J1KYS4 (cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661 GN=LOC111499465 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 7.8e-29 Identity = 76/117 (64.96%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of Sed0022895 vs. ExPASy TrEMBL
Match: A0A6J1G7X1 (cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=3662 GN=LOC111451555 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 7.8e-29 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of Sed0022895 vs. ExPASy TrEMBL
Match: A0A0A0KHB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22 Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of Sed0022895 vs. ExPASy TrEMBL
Match: A0A3N7FK75 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G030200 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.5e-08 Identity = 52/119 (43.70%), Postives = 71/119 (59.66%), Query Frame = 0
BLAST of Sed0022895 vs. ExPASy TrEMBL
Match: A0A5N5LFK3 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_013780 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.2e-06 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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