Sed0022885 (gene) Chayote v1

Overview


Name	Sed0022885
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein NUCLEAR FUSION DEFECTIVE 4-like
Location	LG11: 3431283 .. 3433013 (-)
RNA-Seq Expression	Sed0022885
Synteny	Sed0022885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGAACAAAGAAGTAAAAAACTGGCAATTCGTGAAACAAGTTATCAATGGTCGATGGTTTACGATATTCGCCTCGTTTTTTATCATGATTGGCACAGGTTCCACTTACTTGTTTGGAACATACTCTAAAGTCATAAAAACACAATTCGATTACACTCAAACCCAAATAAATACCTTGGGATTTGCCAAAGATCTCGGCGCCAACCTTGGAATAATAGCTGGGCTTCTCGCTGAGGTGTCTCCACCGTGGGTTCTATTCCTTTTGGGTTCAACCTCAAATTTCCTAAGCTACTTCATAATATGGCTTTTTATTACCGGCCACATCCCTAAGCCCCAATTGTGGCTCATGTTCCTTTTCATTTGCATCTCCGCAAATTCTCAAAACTTTCCGAACACTGCCATTATGGTTACAAGCGTCCGAAACTTTCCTAACCGCCGCGGAATCATCTTGGGTCTTCTCAAAGGCTTTGTCGGACTTGGTGGCGCTGTTTTGACCCAAATTTATTTAGCAATTTACGGCCACGAAAACCCATCTAACCTTGTGCTTCTTCTTTCATGGCTTCCCTCCATTGTTGCTCTCCTTTTTTTCCACTCGATTCGCACAATTCAAGCCCAGAAACACCCACATGAGCTTAATGTGTTTTACCATCTTCTTTCTGTCTCCATAACAATGGCAGTCTTCATCTTTTTCCTCACCATTATTCAAAAACAAATTGTTTTCTCTCACGTCGGCTATGTCGGTGGCGTCGCCGTCGTCATAGCCTTACTATGTCTTCCCTTGCTCATTGCAATCAAAGAAGAGTTGTTCCTTTTCAAGCTCAACAAACAAACAAGTGATCAATGCTTTTCGTATCAATTCCACAAATAATTGCAGTAAATCGCTCGCCCCACTACGCAAAATGTGCGTAGCAACAAGCCGCAAAGAGGGGAAGATTTTAGCATCTTACAAGCTCTATTGAGCAAAGACATGGCTTTGATTTTCATAGCAACGGTTAGTGGATGCGGTTCGTCGGTTGCCGCCATCGACAACCTTGGACAAATAGCGGAATCACTCGGATACCCAGCTCAACATATAAATGTCTTCGTTTCGTGGCTTTCCATTTTCAATTTCTTTGGTCGGGTGTCCTCAGGTTTCATCTCTGAAACCATGATGACAAAATACAAACTCCCTCGTCCTCTAATGTTCGGATTCACCCAACTCTTCATCTGCCTCGGCCTACTCTCCATCGCCTTCCCTTTCTCAGGTTCGATTTATGCAGCGTCGTTGATAATCGGGTTTGGATTCGGAGCCCAAGTTCCATTATTGTTTGCCATAATCTCTGATTTATTCGGGTTGAAACATTACTCCACATTGCTCAATTGCGGGAACTTGGCAGTACCACTAGGATCTTACATATTGAATGTGCATGTGGTTGGAAAATTGTATGATGAGGAAGCCATTAAAGCTGGTAATGTGAAGAACGGGAAGGGGCTGACGTGTACTGGCACTAATTGCTTTAGTGGCGCTTTCATGATTTTATCTGTGGTGACTTTGTTTGGAGTGATGGCTTCATTTGTGCTGGCTTATAGGACAAGAGAATTTTACAAAGGGGATATTTATAAGAAATATAATGATGATTTTGGAGTTACTAAATCGGAAGTGGAACTCAATTCTTCTTTGGAGGATAAGAAAAATGATGAACACATAAACAATTTTGATGATAATACCAACTCTGCCTCCAAATAG

mRNA sequence

ATGGGCAAGAACAAAGAAGTAAAAAACTGGCAATTCGTGAAACAAGTTATCAATGGTCGATGGTTTACGATATTCGCCTCGTTTTTTATCATGATTGGCACAGGTTCCACTTACTTGTTTGGAACATACTCTAAAGTCATAAAAACACAATTCGATTACACTCAAACCCAAATAAATACCTTGGGATTTGCCAAAGATCTCGGCGCCAACCTTGGAATAATAGCTGGGCTTCTCGCTGAGAAACACCCACATGAGCTTAATGTGTTTTACCATCTTCTTTCTGTCTCCATAACAATGGCAGTCTTCATCTTTTTCCTCACCATTATTCAAAAACAAATTGTTTTCTCTCACGTCGGCTATGTCGGTGGCGTCGCCGTCGTCATAGCCTTACTATGTCTTCCCTTGCTCATTGCAATCAAAGAAGAGTTGTTCCTTTTCAAGCTCAACAAACAAACAAGTGATCAATGCTTTTCCAACAAGCCGCAAAGAGGGGAAGATTTTAGCATCTTACAAGCTCTATTGAGCAAAGACATGGCTTTGATTTTCATAGCAACGGTTAGTGGATGCGGTTCGTCGAACGGGAAGGGGCTGACGTGTACTGGCACTAATTGCTTTAGTGGCGCTTTCATGATTTTATCTGTGGTGACTTTGTTTGGAGTGATGGCTTCATTTGTGCTGGCTTATAGGACAAGAGAATTTTACAAAGGGGATATTTATAAGAAATATAATGATGATTTTGGAGTTACTAAATCGGAAGTGGAACTCAATTCTTCTTTGGAGGATAAGAAAAATGATGAACACATAAACAATTTTGATGATAATACCAACTCTGCCTCCAAATAG

Coding sequence (CDS)

ATGGGCAAGAACAAAGAAGTAAAAAACTGGCAATTCGTGAAACAAGTTATCAATGGTCGATGGTTTACGATATTCGCCTCGTTTTTTATCATGATTGGCACAGGTTCCACTTACTTGTTTGGAACATACTCTAAAGTCATAAAAACACAATTCGATTACACTCAAACCCAAATAAATACCTTGGGATTTGCCAAAGATCTCGGCGCCAACCTTGGAATAATAGCTGGGCTTCTCGCTGAGAAACACCCACATGAGCTTAATGTGTTTTACCATCTTCTTTCTGTCTCCATAACAATGGCAGTCTTCATCTTTTTCCTCACCATTATTCAAAAACAAATTGTTTTCTCTCACGTCGGCTATGTCGGTGGCGTCGCCGTCGTCATAGCCTTACTATGTCTTCCCTTGCTCATTGCAATCAAAGAAGAGTTGTTCCTTTTCAAGCTCAACAAACAAACAAGTGATCAATGCTTTTCCAACAAGCCGCAAAGAGGGGAAGATTTTAGCATCTTACAAGCTCTATTGAGCAAAGACATGGCTTTGATTTTCATAGCAACGGTTAGTGGATGCGGTTCGTCGAACGGGAAGGGGCTGACGTGTACTGGCACTAATTGCTTTAGTGGCGCTTTCATGATTTTATCTGTGGTGACTTTGTTTGGAGTGATGGCTTCATTTGTGCTGGCTTATAGGACAAGAGAATTTTACAAAGGGGATATTTATAAGAAATATAATGATGATTTTGGAGTTACTAAATCGGAAGTGGAACTCAATTCTTCTTTGGAGGATAAGAAAAATGATGAACACATAAACAATTTTGATGATAATACCAACTCTGCCTCCAAATAG

Protein sequence

MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINTLGFAKDLGANLGIIAGLLAEKHPHELNVFYHLLSVSITMAVFIFFLTIIQKQIVFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQTSDQCFSNKPQRGEDFSILQALLSKDMALIFIATVSGCGSSNGKGLTCTGTNCFSGAFMILSVVTLFGVMASFVLAYRTREFYKGDIYKKYNDDFGVTKSEVELNSSLEDKKNDEHINNFDDNTNSASK

Homology

[Close]

BLAST of Sed0022885 vs. NCBI nr
Match: KAG6583529.1 (Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-69
Identity = 199/516 (38.57%), Postives = 227/516 (43.99%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N+  ++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++K +FDY QTQ+NT
Sbjct: 1   MGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKAKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSM 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------S 276
            FS  GY GGVAV+  L+CLPLLIAIKEELFLFKL KQT                    S
Sbjct: 241 AFSQAGYAGGVAVIGVLICLPLLIAIKEELFLFKLGKQTMNPSVVVSIPREQLKEISKIS 300

[Close]

BLAST of Sed0022885 vs. NCBI nr
Match: XP_022964773.1 (uncharacterized protein LOC111464774 [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-65
Identity = 200/573 (34.90%), Postives = 231/573 (40.31%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N+  ++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSM 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------- 276
           VFS  GY  GVAV++ L+CLPLLIAIKEELFLFKL+KQT                     
Sbjct: 241 VFSQAGYASGVAVIVVLICLPLLIAIKEELFLFKLDKQTMNPSVLVSIPHEQLEEISLPS 300

[Close]

BLAST of Sed0022885 vs. NCBI nr
Match: XP_023520294.1 (uncharacterized protein LOC111783608 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-65
Identity = 202/574 (35.19%), Postives = 230/574 (40.07%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N+ V++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGDNRGVESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSDYIPKPHLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTNVRNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNKNST 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPSIVCFLCFLPIRTIKGRKHPQELKVFYHLLYVSIVIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------S 276
            FS  GY  GVAV++ L+CLPLL+AIKEELFLFKL KQT                    S
Sbjct: 241 AFSQAGYASGVAVIVILICLPLLVAIKEELFLFKLGKQTMNPSVVVSLPCEQLEEISKIS 300

[Close]

BLAST of Sed0022885 vs. NCBI nr
Match: XP_022970244.1 (uncharacterized protein LOC111469253 [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-65
Identity = 198/576 (34.38%), Postives = 228/576 (39.58%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N++V++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGDNRKVESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVPKPHLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTNVSNFPNQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSI 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPTIVCFLCFLPIRTIKARKHPRELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------- 276
            FS  GY GG+ V++ L+CLPLLIAIKEELFLFKL KQT                     
Sbjct: 241 AFSQAGYAGGIVVIVVLICLPLLIAIKEELFLFKLGKQTMNPSVVVSLPREQLEEISKLS 300

[Close]

BLAST of Sed0022885 vs. NCBI nr
Match: XP_022964779.1 (uncharacterized protein LOC111464779 [Cucurbita moschata])

HSP 1 Score: 259.2 bits (661), Expect = 4.0e-65
Identity = 201/576 (34.90%), Postives = 228/576 (39.58%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N+  ++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSM 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------- 276
           VFS  GY  GVAV++ L+CLPLLIAIKEELFLFKL KQT                     
Sbjct: 241 VFSQAGYASGVAVIVVLICLPLLIAIKEELFLFKLGKQTMNPSVVVSLPCEQLEEISKNS 300

[Close]

BLAST of Sed0022885 vs. ExPASy TrEMBL
Match: A0A0A0LVD8 (Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G097660 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.9e-84
Identity = 181/314 (57.64%), Postives = 214/314 (68.15%), Query Frame = 0


Query: 5   KEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINTLGFA 64
           +E KNW+FVKQV+ GRWFTIFASF +MIG GS YLFGTYSK++KT+F+Y QTQ+NTLGFA
Sbjct: 2   EERKNWRFVKQVVEGRWFTIFASFLVMIGCGSPYLFGTYSKLLKTKFNYNQTQLNTLGFA 61

Query: 65  KDLGANLGIIAGLLAE--------------------KHPHELNVFYHLLSVSITMAVFIF 124
           KDLG+NLG+ AGL AE                    K+PHE  VFYH L ++IT+A+FI 
Sbjct: 62  KDLGSNLGVFAGLFAEILAILFFFFHGYPPLIIQAPKYPHERKVFYHFLYIAITIAIFIL 121

Query: 125 FLTIIQKQIVFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQTSDQ--------- 184
           FLTI Q+  VFSH  Y+GGV V++ L+ LPLLIAIKEE FLFKLN+QT D          
Sbjct: 122 FLTITQRNTVFSHGNYIGGVVVIVVLISLPLLIAIKEEFFLFKLNQQTKDPSVVSIPVQK 181

Query: 185 -----------CFSN---KPQRGEDFSILQALLSKDMALIFIATVSGCGSSNGKGLTCTG 244
                        SN    PQRGEDFSILQAL S DM LIFIAT+S CGSSNGKGLTC G
Sbjct: 182 LEEIPETSLPLSLSNNLSNPQRGEDFSILQALFSIDMTLIFIATISACGSSNGKGLTCKG 241

Query: 245 TNCFSGAFMILSVVTLFGVMASFVLAYRTREFYKGDIYKKYNDDFGVTKSEVELNSSLED 276
            +CFS +F+IL  VT FG MASFVLAYRTREFYKGDIYK+Y D+    +  V+L      
Sbjct: 242 AHCFSESFIILVGVTTFGAMASFVLAYRTREFYKGDIYKRYRDE----QMWVKL------ 301

[Close]

BLAST of Sed0022885 vs. ExPASy TrEMBL
Match: A0A6J1HLW5 (uncharacterized protein LOC111464774 OS=Cucurbita moschata OX=3662 GN=LOC111464774 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 6.7e-66
Identity = 200/573 (34.90%), Postives = 231/573 (40.31%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N+  ++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSM 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------- 276
           VFS  GY  GVAV++ L+CLPLLIAIKEELFLFKL+KQT                     
Sbjct: 241 VFSQAGYASGVAVIVVLICLPLLIAIKEELFLFKLDKQTMNPSVLVSIPHEQLEEISLPS 300

[Close]

BLAST of Sed0022885 vs. ExPASy TrEMBL
Match: A0A6J1I4Z4 (uncharacterized protein LOC111469253 OS=Cucurbita maxima OX=3661 GN=LOC111469253 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 8.7e-66
Identity = 198/576 (34.38%), Postives = 228/576 (39.58%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N++V++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGDNRKVESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVPKPHLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTNVSNFPNQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSI 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPTIVCFLCFLPIRTIKARKHPRELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------- 276
            FS  GY GG+ V++ L+CLPLLIAIKEELFLFKL KQT                     
Sbjct: 241 AFSQAGYAGGIVVIVVLICLPLLIAIKEELFLFKLGKQTMNPSVVVSLPREQLEEISKLS 300

[Close]

BLAST of Sed0022885 vs. ExPASy TrEMBL
Match: A0A6J1HP71 (uncharacterized protein LOC111464779 OS=Cucurbita moschata OX=3662 GN=LOC111464779 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 201/576 (34.90%), Postives = 228/576 (39.58%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N+  ++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSM 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------- 276
           VFS  GY  GVAV++ L+CLPLLIAIKEELFLFKL KQT                     
Sbjct: 241 VFSQAGYASGVAVIVVLICLPLLIAIKEELFLFKLGKQTMNPSVVVSLPCEQLEEISKNS 300

[Close]

BLAST of Sed0022885 vs. ExPASy TrEMBL
Match: A0A6J1HLW0 (uncharacterized protein LOC111464768 OS=Cucurbita moschata OX=3662 GN=LOC111464768 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65
Identity = 199/573 (34.73%), Postives = 230/573 (40.14%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG N+  ++W FVKQV+ GRWF++F SF IMIG GS YLFGTYSK++KT+FDY QTQ+NT
Sbjct: 1   MGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNT 60

Query: 61  LGFAKDLGANLGIIAGLLAE---------------------------------------- 120
           LGFAKDLG+NLG+ AGL AE                                        
Sbjct: 61  LGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSM 180

Query: 181 ---------------------------KHPHELNVFYHLLSVSITMAVFIFFLTIIQKQI 240
                                      KHP EL VFYHLL VSI +AVF+ FLTI Q+ I
Sbjct: 181 DLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNI 240

Query: 241 VFSHVGYVGGVAVVIALLCLPLLIAIKEELFLFKLNKQT--------------------- 276
           VFS  GY  GVAV++ L+CLPLLIAIKEELFLFKL+KQT                     
Sbjct: 241 VFSQAGYASGVAVIVLLICLPLLIAIKEELFLFKLDKQTMNPSVLVSIPHEQLEEISLPS 300

[Close]

BLAST of Sed0022885 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 9.7e-25
Identity = 95/353 (26.91%), Postives = 134/353 (37.96%), Query Frame = 0


Query: 1   MGKNKEVKNWQFVKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINT 60
           MG ++ V+   F+    NGRWF +FASF IM   G+TYLFGTYSK IK+   Y QT +N 
Sbjct: 1   MGNDETVR---FLIHFFNGRWFMVFASFLIMACAGATYLFGTYSKDIKSTLGYDQTTLNL 60

Query: 61  LGFAKDLGANLGIIAGLLAEKHP------------------------------------- 120
           LGF KDLGAN+G+++GL+AE  P                                     
Sbjct: 61  LGFFKDLGANVGVLSGLIAEVTPTWFVLTIGSAMNFVGYFMIWLTVTGKVAKPKVWQMCL 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 YICIGANSQNFANTGALVTCVKNFPESRGVMLGLLKGYVGLSGAIFTQLYFAIYGHDSKS 180

Query: 181 -----------------------------HELNVFYHLLSVSITMAVFIFFLTIIQKQIV 193
                                        +EL+VFY  L +SI +A+F+  + I +KQ+ 
Sbjct: 181 LILLIAWLPAAVSLVFVYLIREKKVVRQRNELSVFYQFLYISIFLALFLMAMNIAEKQVH 240

HSP 2 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 47/123 (38.21%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 133 LPLLIAIKEELFLFKLNKQTSDQCFSNKPQRGEDFSILQALLSKDMALIFIATVSGCGSS 192
           LPLL AI  ELF  K      +      P      ++    +  D   +   T  G    
Sbjct: 445 LPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEALKQLTARGLTRK 504

Query: 193 NGKGLTCTGTNCFSGAFMILSVVTLFGVMASFVLAYRTREFYKGDIYKKYNDDFGVTKSE 252
           + K LTC G+ C+   F+IL+ VT FG + S  LA RTREFYKGDIYKK+ +     +SE
Sbjct: 505 DVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREFYKGDIYKKFRES---PESE 564

Query: 253 VEL 256
            EL
Sbjct: 565 SEL 564

[Close]

BLAST of Sed0022885 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 3.3e-17
Identity = 84/344 (24.42%), Postives = 118/344 (34.30%), Query Frame = 0


Query: 15  QVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINTLGFAKDLGANLGII 74
           Q++ GRWF  F S  IM   G+TY+FG YS  IK    Y QT +N L F KDLGAN+G++
Sbjct: 16  QILTGRWFMFFGSLLIMSTAGATYMFGIYSGDIKETLGYDQTTLNLLSFFKDLGANVGVL 75

Query: 75  AGLLAEKHP--------------------------------------------------- 134
           AGLL E  P                                                   
Sbjct: 76  AGLLNEVTPPWFILLIGAILNFFGYFMIWLAVTERISKPQVWHMCLYICVGANSQSFANT 135

Query: 135 ------------------------------------------------------------ 193
                                                                       
Sbjct: 136 GSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYRAFYGEDTKELILMIGWLPAIVSF 195

HSP 2 Score: 63.2 bits (152), Expect = 3.9e-10
Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 194 GKGLTCTGTNCFSGAFMILSVVTLFGVMASFVLAYRTREFYKGDIYKKYND 245
           G+ L C GT+CF  +F+I++ VTLFGV+ S VL  RT++FYK DIYKK+ +
Sbjct: 515 GQDLNCIGTSCFKLSFIIIAAVTLFGVLVSMVLVIRTKKFYKSDIYKKFRE 565

[Close]

BLAST of Sed0022885 vs. TAIR 10
Match: AT3G01930.2 (Major facilitator superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 6.1e-11
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 13 VKQVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINTLGFAKDLGANLG 72
          VK  IN RW    A+ +I    G  YLFG+ S VIK+  +Y Q Q++ LG AKDLG ++G
Sbjct: 9  VKSFINNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQLSRLGVAKDLGDSVG 68

Query: 73 IIAGLLAEKHP 84
           +AG L+E  P
Sbjct: 69 FLAGTLSEILP 79

[Close]

BLAST of Sed0022885 vs. TAIR 10
Match: AT5G14120.1 (Major facilitator superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-10
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 17 INGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINTLGFAKDLGANLGIIAG 76
          IN RW    A+ +I    G  YLFG+ S VIK+  +Y Q +++ LG AKDLG ++G IAG
Sbjct: 13 INNRWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKELSRLGVAKDLGDSVGFIAG 72

Query: 77 LLAEKHP 84
           L+E  P
Sbjct: 73 TLSEILP 79

[Close]

BLAST of Sed0022885 vs. TAIR 10
Match: AT1G74780.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08
Identity = 24/64 (37.50%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 15 QVINGRWFTIFASFFIMIGTGSTYLFGTYSKVIKTQFDYTQTQINTLGFAKDLGANLGII 74
          +++  +W  + AS +I   +G++Y FG YS V+K+   Y Q+ ++T+   KD+GAN G+ 
Sbjct: 2  EILRTKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVF 61

Query: 75 AGLL 79
          +GLL
Sbjct: 62 SGLL 65

The following BLAST results are available for this feature:

BLAST of Sed0022885 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583529.1	2.7e-69	38.57	Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022964773.1	1.4e-65	34.90	uncharacterized protein LOC111464774 [Cucurbita moschata]	[more]
XP_023520294.1	1.4e-65	35.19	uncharacterized protein LOC111783608 [Cucurbita pepo subsp. pepo]	[more]
XP_022970244.1	1.8e-65	34.38	uncharacterized protein LOC111469253 [Cucurbita maxima]	[more]
XP_022964779.1	4.0e-65	34.90	uncharacterized protein LOC111464779 [Cucurbita moschata]	[more]

BLAST of Sed0022885 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022885 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVD8	1.9e-84	57.64	Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G09766...	[more]
A0A6J1HLW5	6.7e-66	34.90	uncharacterized protein LOC111464774 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]
A0A6J1I4Z4	8.7e-66	34.38	uncharacterized protein LOC111469253 OS=Cucurbita maxima OX=3661 GN=LOC111469253...	[more]
A0A6J1HP71	1.9e-65	34.90	uncharacterized protein LOC111464779 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]
A0A6J1HLW0	2.5e-65	34.73	uncharacterized protein LOC111464768 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]

BLAST of Sed0022885 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28120.1	9.7e-25	26.91	Major facilitator superfamily protein	[more]
AT2G39210.1	3.3e-17	24.42	Major facilitator superfamily protein	[more]
AT3G01930.2	6.1e-11	46.48	Major facilitator superfamily protein	[more]
AT5G14120.1	6.7e-10	46.27	Major facilitator superfamily protein	[more]
AT1G74780.1	2.2e-08	37.50	Nodulin-like / Major Facilitator Superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010658	Nodulin-like	PFAM	PF06813	Nodulin-like	coord: 20..84 e-value: 3.4E-19 score: 69.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..280
None	No IPR available	PANTHER	PTHR21576:SF29	PROTEIN NUCLEAR FUSION DEFECTIVE 4	coord: 80..192
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 192..246
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 80..192
None	No IPR available	PANTHER	PTHR21576:SF29	PROTEIN NUCLEAR FUSION DEFECTIVE 4	coord: 192..246
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 4..83
None	No IPR available	PANTHER	PTHR21576:SF29	PROTEIN NUCLEAR FUSION DEFECTIVE 4	coord: 4..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022885.1	Sed0022885.1	mRNA