Sed0022878 (gene) Chayote v1

Overview
NameSed0022878
Typegene
OrganismSechium edule (Chayote v1)
DescriptionReplication protein A subunit
LocationLG08: 1617414 .. 1621932 (+)
RNA-Seq ExpressionSed0022878
SyntenySed0022878
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTCAACCTCTCGCCGGATCTCTCTCAGAGCTCTGACCTACCTTCTTCTCATCCTCTACAGTCGAGCAATGGCGAAAACCACAACACCGGGGGGTATTTCGAAGATCTTGGCGAATCCGTCGCCGGATTCGGCCTCCGATGTCCCCGAGGTCGTGCTTCAGGTCCTCGATCTCAAGGCGACGGGAAATCGCTACATGTGAGTGTTCTTTTTCGTCATTTTTATGAATTTTGATTAGTACTCTGCCGTTCTACATGTGATCTATCTTGAAGTGTCTGATTAGTTCGTTGTAGTCCTTGTTGACATGATTTATGTTGGAAATCTTGTTTAGATCTCAATGTTTGTGTTGTGTTTGTAACGTAGAGTCTAGGCTGTTAATTTGTTTGAAGTCTCTGGTTTAGATCTCAAGGCGACGGGAAATTGCTACATGTGAGTGATCTTTTTGTCATTTTTGTGAATTATGATTAGTAATTTTCTGTTCTATATGTGACCTGGCATGAAGTGTATGAAACTCCCTGTTGATTCTGACCTAAGTTCGGTGAAGTCCTTGTTGACATGATTAAGGTTGGAACTCTGGTTTAGATCTCAATGTTTGTGTTGTGATTAAGACTCTGCTGTTCTATCTGTGACCTTGCTTAAAGTGTCTGATTAGTTTGGTGCAATCCTCGTTGATATGATTTATGTTGAAAATCTGGTTTAGATCTCAATGTTTGTGTTGTGTTTTGTAATGTAGACTGTTAATTGGTTTTAAGTCTCTGCGAACAGCATTTAGTTTGAGTAAATTGATGCATTAACGATTTGGGAGTTTTCTGTTGATGTTTGTGATTGAAGGTTTAAAGGTTATTTGGATTGTTTCGTTAATTGATATTATTTCACTTTCAGGTTTACTGCTACCGATGGGGATATGAAGCTAAAAGCTATTCTTCCATCAAACCTTACGTCTGAGGTCATATCTGGAAACATTCAAAATCTGGGTCTTATTCGTGTTGTTGATTATTCTCTCAATGACATCCCGAACAAGTCAGAAAAGTGAGTTTAATGAGTAAAATCTTGATAATTAATCATGTGTTGCATTCCCTAATTTTGTAAGAATCTATTCTTTGTTTTGATTTGATTTTCATATGCGACACCTTTTTTAATATCAGGTATCTAATTGTGACGAAATGTGAGGTTGTTTCTTCTGCTCTAGAAAAGGAGGTAAAAACTGAGGTTAAATTGGAAACCATTGTTTTGAAACCAAAGCAAGAGTGTGACGATACGAGTGGGATTAATAATGGAGCTGGTGGTATCCTTTTAAAACCAAAGCAAGAATTTGTTTCCAAATCTGCTGCCCAGATTGTACATGAGCAGCGTACAAAGTGAGTATACTCTCTTGAAGAGAATTTGTTGTCCTTTGTTCTTAGGTTTTCTGAATTTTTCTGTGCAATTACTGATACATATTCAAATGTTTTTGGTTGTCTTTGAACAGTATGGCACCATCTGCACGAATGTCCATGACAAGGCGAGTTCATCCCCTTGTTTGCTTAAATCCATATCAAGGAGATTGGACCATCAAAGTCCGTGTTACAGACAAGGGAAACCTTCGCACCTACAAGAATGCTCAAGGTGAAGGTTGTGTTTTCAATGTGGTGTTGACAGATGAAGATGTAAGCAATTTTCTGATCTGTTTAATCTTTACCATGTTCAACTGAAACAATTGCATTTTTTAATCTAATGTTGATAAGCAAGTGAACTTGTTTCTTTTCGTTCAGGGTACACAAATACAGGCAACGATGTTCAATGAAGCTGCAAGAAAGTTCTATGAAAAGTTTGCCGTTGGCAAAGTTTACTACATTTCCAGGGGAACTTTGAAAGTTGCTAATAAGAAATTCAAGACAGTTCAAAATGACTATGAAATGACTTTAAATGTCTATTCTCAAGTAGATGAGGCCAGCAATGAAGCTGCTTTCATTCCTGAAACAAAATTTAATTTTGTCAAGATTGATATGCTAGGTCCACACGTGAATGGAAGGGAGCTTGTTGGTAAGAATTCTATTCTAGCTTAATTAACTTGTCCTTGCATAATTTTTCTTTGCTAATTAGAAAGTTCATGTGTTTATGCATCTGTCAGATGTTATTGGAGTTGTGCAGAGTGTTTCTTCAACAATGAGCATTCGAAGGAAAATCAACAATGAGACAGCTGCTAAACGCGATGTAACTATTGCAGATGAGACGTGAGTAATTGTTTCTCATTGATGAAGATTGTTGTCCATGTACATCATTGATATTGAAGTTGCGAGATTCAAATTGCAGGAAAAAGACAGTTGTGATATCTTTATGGAATGATCTTGCAACAAATTTGGGGCAGGAGTTGCTTGACGTTGCCGATCAATCTCCTATAATTGCAGTGAAGCATCTTAAAGTTGGAGATTTTCAAGGTACTGCTAAGATTGAAGAAAAATTATGTCTGGTGGAGAGATGTGCAGACTTTTACATATTATTTGGTTTCAATTGCAGGTGTATCTTTGTCTACAATAAGTAGAAGCTCAATTTTAATAAACCCAGACATGAAGGAAGCACACGATTTGAGATCCTGGTAAGTTTACAAATTGCTAATTGTGTTGGTACAATAATTATATCATTAACTATAATAGTAATGCACATATTACCTGCGTACAGGTACGATTCTGAAGGAAAAGCCATATCATTGTCTTCTGTCAGCTCTGGCTTGAGCCCATCATCCAAAAGTGGGTTGAGGTCCATGTACGCTGACCGGGTCTCCCTATCTCATATACTCCAAAATAAATCGTTGGGAGAAGAAAAGGTAACATTTTCTAATTAAACAAAGTAAAACTTCAAAATGATTTATTCAAGTGTTCTATGCAAATGGAATTATTATTCAACAAGAATAACATTAAGTTCTTGTCTTGACAGCCTGTGTTCTTCAGCATTAGAGCATATGTCAGCTTCATTAAGCCCGATCAAACGATGTGGTATCGGGCTTGTAAAACATGCAACAAGAAGGTGACTGAAGCCATTGGATCAGGATACTGGTGCGAAAGTTGCCAGAAAAACGATGAAGAATGCAGTTTAAGGTACATAATGGTTGTGAGAGTTTCTGATGCAAGTGGTGAAGCTTGGTTCTCTACATTCAATGAAGAAGCAGAGAGGATTATAGGATGCTCTGCAGATGAGCTCGACCAGCTCAAATCACAGGTAACAAATCATATATTATTATAGTTTGTCATTGAAAAACTTGAAATTAGCAGTGTAAAAAAAAATGTCCAGCTACCTAAATAACATGACTATCCAACTCAAACTGTAATCGTTGATTTTAGTTAAAATTTTCTTTGAATTGGGTTGGTCAAAGTAAATGTGTAACATATTGAATTGGTTTTTGGGTTATCCAATTTTTGATTTGGTTCAATCCAATCAAACATGAACTTAGATTAACATTATATGTGTGTTTAAGATCCATTATCAAGATAGATTTTTAGCAGGCACTAACAAAAGCATTTTTACTTTTTTATGTTTGCATATTTATGGGCTATAGGTTTTAAGGTAATAAGCTATGTCTTGAAGAGTAAAGAAAACTAACATTTCTTTAAAAAGAAAGGGGAATGAACCCAATGTGGTAAATTCAACCCATCCTTGTATTGGGTTTCTCTAATGTATAGGTTTGGATGGACCAACCTTTAAAACTTAAATAGTTATTTTGTCCGATAAAAATAAAATTGAGATCTAATTTAAGATTGACGAGTTCAAAAGAGACATTATTTTTAGAGGACATATTAGGGTTTTACATGGGAAAGAATGAAGATCTTGTAACAATGTATAAAAAATGTGGATTATTTTTTTCATTGTCAATTAATTTTGAGACGGATGGATGTCCACTCTATCAAATAATTAGAAACAAATTCAGTTGACATTTTTTTTGCTCATGTTTTAAATACAGATTGGAGAAGAAAGTTCATATCAACTGAAACTGAAAGAAGCCACTTGGGTTCCACATTTGTTTCGAGTCAGTGTTTCTCAGAATGAATACAACAATGAGAAGAGACAAAGGATGACAGTCAGGTCAGTTGCTCCAGTTGACTTTTCTGCTGAATCCAGATTTTTGTTAGATGAAATTGCAAAGATGAAAGCTTCATAAGAGTGTGATTTATTGCAGAGCCATGACTTATCTATCTTATCATATTATTTTAGGACCTTAGTAGTAAATGTAAATTATATCATCAATTAACAATTTCTTTTCTCTAGTGACCATATGGGAATGTTTTTGCATATATTACAGCTTTTGTAGCTAGATGCTTTCTTCTAACGCTTCAATTCTTCCTTCTAAACGAAAGGCATGTCTTCTGGCTCAATTATATATGGTTACTCATTTCATCTGGATAAGTGATGTGAAAATTATCCATAAAGGTCAATGAGAAATGTTCCCATGTCTGGAAAAAGTATCTGTTAGTGTTTATAATAATAATTAGTGAGGTTCTATAATTTGGGTTCTTTTTTTTTAGTACATATTGGGAGAGGGAG

mRNA sequence

CTTCTTCTTCAACCTCTCGCCGGATCTCTCTCAGAGCTCTGACCTACCTTCTTCTCATCCTCTACAGTCGAGCAATGGCGAAAACCACAACACCGGGGGGTATTTCGAAGATCTTGGCGAATCCGTCGCCGGATTCGGCCTCCGATGTCCCCGAGGTCGTGCTTCAGGTCCTCGATCTCAAGGCGACGGGAAATCGCTACATGTTTACTGCTACCGATGGGGATATGAAGCTAAAAGCTATTCTTCCATCAAACCTTACGTCTGAGGTCATATCTGGAAACATTCAAAATCTGGGTCTTATTCGTGTTGTTGATTATTCTCTCAATGACATCCCGAACAAGTCAGAAAAGTATCTAATTGTGACGAAATGTGAGGTTGTTTCTTCTGCTCTAGAAAAGGAGGTAAAAACTGAGGTTAAATTGGAAACCATTGTTTTGAAACCAAAGCAAGAGTGTGACGATACGAGTGGGATTAATAATGGAGCTGGTGGTATCCTTTTAAAACCAAAGCAAGAATTTGTTTCCAAATCTGCTGCCCAGATTGTACATGAGCAGCGTACAAATATGGCACCATCTGCACGAATGTCCATGACAAGGCGAGTTCATCCCCTTGTTTGCTTAAATCCATATCAAGGAGATTGGACCATCAAAGTCCGTGTTACAGACAAGGGAAACCTTCGCACCTACAAGAATGCTCAAGGTGAAGGTTGTGTTTTCAATGTGGTGTTGACAGATGAAGATGGTACACAAATACAGGCAACGATGTTCAATGAAGCTGCAAGAAAGTTCTATGAAAAGTTTGCCGTTGGCAAAGTTTACTACATTTCCAGGGGAACTTTGAAAGTTGCTAATAAGAAATTCAAGACAGTTCAAAATGACTATGAAATGACTTTAAATGTCTATTCTCAAGTAGATGAGGCCAGCAATGAAGCTGCTTTCATTCCTGAAACAAAATTTAATTTTGTCAAGATTGATATGCTAGGTCCACACGTGAATGGAAGGGAGCTTGTTGATGTTATTGGAGTTGTGCAGAGTGTTTCTTCAACAATGAGCATTCGAAGGAAAATCAACAATGAGACAGCTGCTAAACGCGATGTAACTATTGCAGATGAGACGAAAAAGACAGTTGTGATATCTTTATGGAATGATCTTGCAACAAATTTGGGGCAGGAGTTGCTTGACGTTGCCGATCAATCTCCTATAATTGCAGTGAAGCATCTTAAAGTTGGAGATTTTCAAGGTGTATCTTTGTCTACAATAAGTAGAAGCTCAATTTTAATAAACCCAGACATGAAGGAAGCACACGATTTGAGATCCTGGTACGATTCTGAAGGAAAAGCCATATCATTGTCTTCTGTCAGCTCTGGCTTGAGCCCATCATCCAAAAGTGGGTTGAGGTCCATGTACGCTGACCGGGTCTCCCTATCTCATATACTCCAAAATAAATCGTTGGGAGAAGAAAAGCCTGTGTTCTTCAGCATTAGAGCATATGTCAGCTTCATTAAGCCCGATCAAACGATGTGGTATCGGGCTTGTAAAACATGCAACAAGAAGGTGACTGAAGCCATTGGATCAGGATACTGGTGCGAAAGTTGCCAGAAAAACGATGAAGAATGCAGTTTAAGGTACATAATGGTTGTGAGAGTTTCTGATGCAAGTGGTGAAGCTTGGTTCTCTACATTCAATGAAGAAGCAGAGAGGATTATAGGATGCTCTGCAGATGAGCTCGACCAGCTCAAATCACAGATTGGAGAAGAAAGTTCATATCAACTGAAACTGAAAGAAGCCACTTGGGTTCCACATTTGTTTCGAGTCAGTGTTTCTCAGAATGAATACAACAATGAGAAGAGACAAAGGATGACAGTCAGGTCAGTTGCTCCAGTTGACTTTTCTGCTGAATCCAGATTTTTGTTAGATGAAATTGCAAAGATGAAAGCTTCATAAGAGTGTGATTTATTGCAGAGCCATGACTTATCTATCTTATCATATTATTTTAGGACCTTAGTAGTAAATGTAAATTATATCATCAATTAACAATTTCTTTTCTCTAGTGACCATATGGGAATGTTTTTGCATATATTACAGCTTTTGTAGCTAGATGCTTTCTTCTAACGCTTCAATTCTTCCTTCTAAACGAAAGGCATGTCTTCTGGCTCAATTATATATGGTTACTCATTTCATCTGGATAAGTGATGTGAAAATTATCCATAAAGGTCAATGAGAAATGTTCCCATGTCTGGAAAAAGTATCTGTTAGTGTTTATAATAATAATTAGTGAGGTTCTATAATTTGGGTTCTTTTTTTTTAGTACATATTGGGAGAGGGAG

Coding sequence (CDS)

ATGGCGAAAACCACAACACCGGGGGGTATTTCGAAGATCTTGGCGAATCCGTCGCCGGATTCGGCCTCCGATGTCCCCGAGGTCGTGCTTCAGGTCCTCGATCTCAAGGCGACGGGAAATCGCTACATGTTTACTGCTACCGATGGGGATATGAAGCTAAAAGCTATTCTTCCATCAAACCTTACGTCTGAGGTCATATCTGGAAACATTCAAAATCTGGGTCTTATTCGTGTTGTTGATTATTCTCTCAATGACATCCCGAACAAGTCAGAAAAGTATCTAATTGTGACGAAATGTGAGGTTGTTTCTTCTGCTCTAGAAAAGGAGGTAAAAACTGAGGTTAAATTGGAAACCATTGTTTTGAAACCAAAGCAAGAGTGTGACGATACGAGTGGGATTAATAATGGAGCTGGTGGTATCCTTTTAAAACCAAAGCAAGAATTTGTTTCCAAATCTGCTGCCCAGATTGTACATGAGCAGCGTACAAATATGGCACCATCTGCACGAATGTCCATGACAAGGCGAGTTCATCCCCTTGTTTGCTTAAATCCATATCAAGGAGATTGGACCATCAAAGTCCGTGTTACAGACAAGGGAAACCTTCGCACCTACAAGAATGCTCAAGGTGAAGGTTGTGTTTTCAATGTGGTGTTGACAGATGAAGATGGTACACAAATACAGGCAACGATGTTCAATGAAGCTGCAAGAAAGTTCTATGAAAAGTTTGCCGTTGGCAAAGTTTACTACATTTCCAGGGGAACTTTGAAAGTTGCTAATAAGAAATTCAAGACAGTTCAAAATGACTATGAAATGACTTTAAATGTCTATTCTCAAGTAGATGAGGCCAGCAATGAAGCTGCTTTCATTCCTGAAACAAAATTTAATTTTGTCAAGATTGATATGCTAGGTCCACACGTGAATGGAAGGGAGCTTGTTGATGTTATTGGAGTTGTGCAGAGTGTTTCTTCAACAATGAGCATTCGAAGGAAAATCAACAATGAGACAGCTGCTAAACGCGATGTAACTATTGCAGATGAGACGAAAAAGACAGTTGTGATATCTTTATGGAATGATCTTGCAACAAATTTGGGGCAGGAGTTGCTTGACGTTGCCGATCAATCTCCTATAATTGCAGTGAAGCATCTTAAAGTTGGAGATTTTCAAGGTGTATCTTTGTCTACAATAAGTAGAAGCTCAATTTTAATAAACCCAGACATGAAGGAAGCACACGATTTGAGATCCTGGTACGATTCTGAAGGAAAAGCCATATCATTGTCTTCTGTCAGCTCTGGCTTGAGCCCATCATCCAAAAGTGGGTTGAGGTCCATGTACGCTGACCGGGTCTCCCTATCTCATATACTCCAAAATAAATCGTTGGGAGAAGAAAAGCCTGTGTTCTTCAGCATTAGAGCATATGTCAGCTTCATTAAGCCCGATCAAACGATGTGGTATCGGGCTTGTAAAACATGCAACAAGAAGGTGACTGAAGCCATTGGATCAGGATACTGGTGCGAAAGTTGCCAGAAAAACGATGAAGAATGCAGTTTAAGGTACATAATGGTTGTGAGAGTTTCTGATGCAAGTGGTGAAGCTTGGTTCTCTACATTCAATGAAGAAGCAGAGAGGATTATAGGATGCTCTGCAGATGAGCTCGACCAGCTCAAATCACAGATTGGAGAAGAAAGTTCATATCAACTGAAACTGAAAGAAGCCACTTGGGTTCCACATTTGTTTCGAGTCAGTGTTTCTCAGAATGAATACAACAATGAGAAGAGACAAAGGATGACAGTCAGGTCAGTTGCTCCAGTTGACTTTTCTGCTGAATCCAGATTTTTGTTAGATGAAATTGCAAAGATGAAAGCTTCATAA

Protein sequence

MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSNLTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLETIVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHPLVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKFYEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVKIDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWNDLATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDSEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVRSVAPVDFSAESRFLLDEIAKMKAS
Homology
BLAST of Sed0022878 vs. NCBI nr
Match: XP_022971740.1 (replication protein A 70 kDa DNA-binding subunit B [Cucurbita maxima])

HSP 1 Score: 1105.5 bits (2858), Expect = 0.0e+00
Identity = 562/624 (90.06%), Postives = 594/624 (95.19%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   TPGGISKILANPSPDSASDVP+VVLQVLDLKATGNRYMFTA DGDMKLK+ILPSN
Sbjct: 1   MANAPTPGGISKILANPSPDSASDVPQVVLQVLDLKATGNRYMFTAADGDMKLKSILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLE--T 120
           LTSEVISGNIQNLGLIRV+DYSLNDIPNK EKYLIVTKCEVVSSAL+KEVK+EVK E   
Sbjct: 61  LTSEVISGNIQNLGLIRVLDYSLNDIPNKPEKYLIVTKCEVVSSALDKEVKSEVKKEEAD 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPKQE DD S +N G+ GILLKPKQE V+KSAAQIVHEQRTNMAPSARMSMTRRVHP
Sbjct: 121 IVLKPKQELDDKSAVNTGS-GILLKPKQELVAKSAAQIVHEQRTNMAPSARMSMTRRVHP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVL DEDGTQIQATMFNEAARKF
Sbjct: 181 LVYLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLADEDGTQIQATMFNEAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE +NEAAF+PETKFNFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVTNEAAFVPETKFNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGRELVDVIGVVQSVS TMSIRRKINNETA KRDVTIADETKKTVV+SLWND
Sbjct: 301 IDMLGPHVNGRELVDVIGVVQSVSPTMSIRRKINNETAPKRDVTIADETKKTVVVSLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ DQSPIIA+K+L+VGDFQGVSLSTISRSSILINPD+KEAH LRSWYDS
Sbjct: 361 LATTVGQELLDIVDQSPIIALKYLRVGDFQGVSLSTISRSSILINPDIKEAHQLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKAIS++SVSSG+SPSSKSG RSMY DRVSLSHILQNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAISMASVSSGMSPSSKSGSRSMYTDRVSLSHILQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVT+AIGSGYWCESCQKNDEECSLRYIMVVRVSDAS EAW STFN 
Sbjct: 481 DQTMWYRACKTCNKKVTDAIGSGYWCESCQKNDEECSLRYIMVVRVSDASCEAWLSTFNA 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERI+GC+A+ELD LKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIVGCTAEELDGLKSQIGEEASYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. NCBI nr
Match: KAG6587586.1 (Replication protein A 70 kDa DNA-binding subunit B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021553.1 Replication protein A 70 kDa DNA-binding subunit B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1105.5 bits (2858), Expect = 0.0e+00
Identity = 563/624 (90.22%), Postives = 594/624 (95.19%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   TPGGISKILANPSPDSASDVP+VVLQVLDLKATGNRYMFTA DGDMKLK+ILPSN
Sbjct: 1   MANAPTPGGISKILANPSPDSASDVPQVVLQVLDLKATGNRYMFTAADGDMKLKSILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLE--T 120
           LTSEVISGNIQNLGLIRV+DYSLNDIPNK EKYLIVTKCEVVSSALEKEVK EVK E   
Sbjct: 61  LTSEVISGNIQNLGLIRVLDYSLNDIPNKPEKYLIVTKCEVVSSALEKEVKFEVKKEEAD 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPKQE DD S +N G+ GILLKPKQE V+KSAAQIVHEQ TNMAPSARMSMTRRVHP
Sbjct: 121 IVLKPKQELDDKSAVNTGS-GILLKPKQELVAKSAAQIVHEQSTNMAPSARMSMTRRVHP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF
Sbjct: 181 LVYLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE +NEAAF+PETKFNFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVTNEAAFVPETKFNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDVIGVVQSVS TMSIRRKINNETA KRDVTIADETKKTVV+SLWND
Sbjct: 301 IDMLGPHVNGRDLVDVIGVVQSVSPTMSIRRKINNETAPKRDVTIADETKKTVVVSLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ADQSPIIA+K+L+VGDFQGVSLSTISRSSILINPD+KEAH LRSWYDS
Sbjct: 361 LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSILINPDIKEAHQLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKAIS++SVSSG+SPSSKSG RSMY DRVSLSHILQNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAISMASVSSGMSPSSKSGSRSMYTDRVSLSHILQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVT+AIGSGYWCESCQKNDEECSLRYIMVVRVSDAS EAW STFN 
Sbjct: 481 DQTMWYRACKTCNKKVTDAIGSGYWCESCQKNDEECSLRYIMVVRVSDASCEAWLSTFNA 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERI+GC+A+ELD LKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIVGCTAEELDGLKSQIGEEASYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. NCBI nr
Match: XP_022933609.1 (replication protein A 70 kDa DNA-binding subunit B-like [Cucurbita moschata])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 561/624 (89.90%), Postives = 593/624 (95.03%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   TPGGISKILANPSPDSASDVP+VVLQVLDLKATGNRYMFTA DGDMKLK+ILPSN
Sbjct: 1   MANAPTPGGISKILANPSPDSASDVPQVVLQVLDLKATGNRYMFTAADGDMKLKSILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLE--T 120
           LTSEVISGNIQNLGLIRV+DYSLNDIPNK EKYLIVTKCEVVSSALEKEVK EVK E   
Sbjct: 61  LTSEVISGNIQNLGLIRVLDYSLNDIPNKPEKYLIVTKCEVVSSALEKEVKFEVKKEEAD 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPKQE DD S +N G+ GILLKPKQE V+KSAAQIVHEQ TNMAPSARMSMTRRVHP
Sbjct: 121 IVLKPKQELDDKSAVNTGS-GILLKPKQELVAKSAAQIVHEQSTNMAPSARMSMTRRVHP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF
Sbjct: 181 LVYLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE +NEAAF+PETKFNFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVTNEAAFVPETKFNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDV+GVVQSVS TMSIRRKINNETA KRDVTIADETKKTVV+SLWND
Sbjct: 301 IDMLGPHVNGRDLVDVVGVVQSVSPTMSIRRKINNETAPKRDVTIADETKKTVVVSLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ DQSPIIA+K+L+VGDFQGVSLSTISRSSILINPD+KEAH LRSWYDS
Sbjct: 361 LATTVGQELLDIVDQSPIIALKYLRVGDFQGVSLSTISRSSILINPDIKEAHQLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKAIS++SVSSG+SPSSKSG RSMY DRVSLSHILQNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAISMASVSSGMSPSSKSGSRSMYTDRVSLSHILQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVT+AIGSGYWCESCQKNDEECSLRYIMVVRVSDAS EAW STFN 
Sbjct: 481 DQTMWYRACKTCNKKVTDAIGSGYWCESCQKNDEECSLRYIMVVRVSDASCEAWLSTFNA 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERI+GC+A+ELD LKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIVGCTAEELDGLKSQIGEEASYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. NCBI nr
Match: XP_023530839.1 (replication protein A 70 kDa DNA-binding subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 562/624 (90.06%), Postives = 594/624 (95.19%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   TPGGISKILANPSPDSASDVP+VVLQVLDLKATGNRYMFTA DGDMKLK+ILPSN
Sbjct: 1   MANAPTPGGISKILANPSPDSASDVPQVVLQVLDLKATGNRYMFTAADGDMKLKSILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLE--T 120
           LTSEVISGNIQNLGLIRV+DYSLNDIPNK EKYLIVTKCEVVSSALEKEVK+EVK E   
Sbjct: 61  LTSEVISGNIQNLGLIRVLDYSLNDIPNKPEKYLIVTKCEVVSSALEKEVKSEVKKEEAD 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPKQE  D S +N G+ GILLKPKQE V+KSAAQIVHEQ TNMAPSARMSMTRRVHP
Sbjct: 121 IVLKPKQEL-DVSAVNTGS-GILLKPKQELVAKSAAQIVHEQSTNMAPSARMSMTRRVHP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF
Sbjct: 181 LVYLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE +NEAAF+PETKFNFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVTNEAAFVPETKFNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDVIGVVQSVS TMSIRRKINNETA KRDVTIADETKKTVV+SLWND
Sbjct: 301 IDMLGPHVNGRDLVDVIGVVQSVSPTMSIRRKINNETAPKRDVTIADETKKTVVVSLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ADQSPIIA+K+L+VGDFQGVSLSTISRSSILINPD+KEAH LRSWYDS
Sbjct: 361 LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSILINPDIKEAHQLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKAIS++SVSSG+SPSSKSG RSMY DRVSLSHILQNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAISMASVSSGMSPSSKSGSRSMYTDRVSLSHILQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVT+AIGSGYWCESCQKNDEECSLRYIMVVRVSDAS EAW STFN 
Sbjct: 481 DQTMWYRACKTCNKKVTDAIGSGYWCESCQKNDEECSLRYIMVVRVSDASCEAWLSTFNA 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERI+GC+A+ELD LKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIVGCTAEELDGLKSQIGEEASYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 622

BLAST of Sed0022878 vs. NCBI nr
Match: XP_038878718.1 (replication protein A 70 kDa DNA-binding subunit B-like [Benincasa hispida])

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 555/624 (88.94%), Postives = 595/624 (95.35%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   T GGIS IL+NPSPDS SDVP+VV+QV+DLKATGNRYMFTA+DGDMKLKAILPSN
Sbjct: 1   MADAPTVGGISNILSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLET-- 120
           LTS+VISGNIQNLGLIRV+DYSLNDIPNK EKYLIVTKCEVVS ALEKEVKTEVK E   
Sbjct: 61  LTSDVISGNIQNLGLIRVLDYSLNDIPNKQEKYLIVTKCEVVSPALEKEVKTEVKKEETG 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           I+LKPK E DD S  NNG+ GILLKPKQE V+KSAAQIVHEQ+TNMAP+ARMSMTRRVHP
Sbjct: 121 IILKPKLEDDDKSTFNNGS-GILLKPKQELVAKSAAQIVHEQQTNMAPAARMSMTRRVHP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPYQGDWTIKVRVTDKGNLRTYKNAQGEG VFNVVLTDEDGTQIQATMFN+AARKF
Sbjct: 181 LVYLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGYVFNVVLTDEDGTQIQATMFNDAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYYISRG LKVANKKFKTVQNDYEMTLNV SQVDE S+EAAF+PETK+NFVK
Sbjct: 241 YEKFSLGKVYYISRGALKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDVIGVVQSVS TMSIRRKINNETA KRDVTIADETKKTVVISLWND
Sbjct: 301 IDMLGPHVNGRDLVDVIGVVQSVSPTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ADQSPIIAVK+L+VGDFQGVSLSTISRSSI+INPD+KEAHDLRSWYDS
Sbjct: 361 LATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRSSIMINPDIKEAHDLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKA+S+SSVSSGLSPS+KSG RSMY+DR+SLSHILQNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAVSMSSVSSGLSPSTKSGTRSMYSDRISLSHILQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTC KKVTEAIGSGYWC++CQKNDEECSL+YIMVVRVSDASGEAWFSTFNE
Sbjct: 481 DQTMWYRACKTCKKKVTEAIGSGYWCDNCQKNDEECSLKYIMVVRVSDASGEAWFSTFNE 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERIIGCSADELDQLKSQ+GEE+SYQLKLK+ATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIIGCSADELDQLKSQVGEENSYQLKLKQATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. ExPASy Swiss-Prot
Match: Q9SD82 (Replication protein A 70 kDa DNA-binding subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA1B PE=3 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 3.3e-248
Identity = 425/623 (68.22%), Postives = 517/623 (82.99%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           M  + T  GI+ +LAN S DS+S  PE+V+QV+DLK  GNRY F+A DG MK+KA+LP+ 
Sbjct: 1   MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAGNRYTFSANDGKMKIKAMLPAT 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKS-EKYLIVTKCEVVSSALEKEVKTEVKLETI 120
           LTS++ISG IQNLGLIR+++Y++NDIP KS EKY+++TKCE V+SAL+ E+K E+K  T 
Sbjct: 61  LTSDIISGKIQNLGLIRLLEYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAEIKAST- 120

Query: 121 VLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHPL 180
                              GI+LKPK EFV+KSA+QI++EQR N AP+ARM+MTRRVHPL
Sbjct: 121 -------------------GIMLKPKHEFVAKSASQIINEQRGNAAPAARMAMTRRVHPL 180

Query: 181 VCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKFY 240
           V LNPYQG WTIKVRVT+KG +RTYKNA+GEGCVFNV LTDE+GTQIQATMFN AARKFY
Sbjct: 181 VSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFY 240

Query: 241 EKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVKI 300
           ++F +GKVYYISRG+LK+ANK+FKTVQNDYEMTLN  S+V+EASNE  F PETKFNFV I
Sbjct: 241 DRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPI 300

Query: 301 DMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWNDL 360
           D LG +VN ++L+DVIGVVQSVS TMSIRRK +NE   KRD+T+ADETKKTVV+SLWNDL
Sbjct: 301 DELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDL 360

Query: 361 ATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDSE 420
           AT +GQELLD+AD  P+IA+K LKVG FQGVSLSTISRS+++INP+  EA  L+SWYD+E
Sbjct: 361 ATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDAE 420

Query: 421 GKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKPD 480
           GK  S+S++ SG+S S+ +G RSMY+DRV LSHI  N SLGEEKPVFFS RAY+SFIKPD
Sbjct: 421 GKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPD 480

Query: 481 QTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNEE 540
           QTMWYRACKTCNKKVTEA+ SGYWCESCQK D+ECSLRYIM V+VSD++GE W S FN+E
Sbjct: 481 QTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDE 540

Query: 541 AERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVRS 600
           AE+IIGC+AD+L+ LKS+ GE + +Q KLKEATW  HLFR+SVSQ EYN+EKRQR+TVR 
Sbjct: 541 AEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRG 600

Query: 601 VAPVDFSAESRFLLDEIAKMKAS 623
           V+P+DF+AE+R LL +I+K K S
Sbjct: 601 VSPIDFAAETRLLLQDISKNKTS 603

BLAST of Sed0022878 vs. ExPASy Swiss-Prot
Match: Q9FME0 (Replication protein A 70 kDa DNA-binding subunit D OS=Arabidopsis thaliana OX=3702 GN=RPA1D PE=2 SV=1)

HSP 1 Score: 845.5 bits (2183), Expect = 3.8e-244
Identity = 420/622 (67.52%), Postives = 520/622 (83.60%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           M  + TP  IS +L+NPS DS+SD  E+V+QV+DLK  GNRY F+A DG  K+KA+  ++
Sbjct: 1   MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGNRYTFSANDGKTKVKAMFTAS 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKL-ETI 120
           LT E+ISG IQNLGLIR++D+++NDI +KS KY +VTKCE V S L+ E+  + K  E  
Sbjct: 61  LTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLDSKSGEEE 120

Query: 121 VLKPKQ---ECDDTSGINNGAG-GILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRR 180
             +PK+   E    S +N+    GI LKPKQEFV+KSA+QI+ EQR N AP+ARM+MTRR
Sbjct: 121 AREPKKQKLEHSPVSPLNDVVSTGITLKPKQEFVAKSASQIMSEQRGNAAPAARMAMTRR 180

Query: 181 VHPLVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAA 240
           VHPLV LNPYQG+WTIKVRVT+KG +R YKNA+GEGCVFNV LTDE+GTQIQATMFN+AA
Sbjct: 181 VHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAA 240

Query: 241 RKFYEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFN 300
           RKF+++F +GKVYYISRG+LK+ANK+FKTVQNDYEMTLN  S+V+EAS+E  FIPETKFN
Sbjct: 241 RKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFN 300

Query: 301 FVKIDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISL 360
           FV I+ LG +VN +EL+D+IGVVQSVS TMSIRR+ +NE   KRD+T+ADE++KTVV+SL
Sbjct: 301 FVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSL 360

Query: 361 WNDLATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSW 420
           WNDLAT +GQELLD+ADQSP+IA+K LKVGDFQGVSLSTISRS+++INP+  EA  L+SW
Sbjct: 361 WNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSW 420

Query: 421 YDSEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSF 480
           +DSEGK IS+SS+ SG+SPS+K+G RS+Y DRV LSHI  N SL EEKPVFFS RAY+SF
Sbjct: 421 FDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISF 480

Query: 481 IKPDQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFST 540
           IKPDQTMWY+ACKTCNKKVTEA+ SGYWCE CQ+  EECSLRYIM V+V+D+SGE W S+
Sbjct: 481 IKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISS 540

Query: 541 FNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRM 600
           FN+EAE+I+GCSADEL++LKS+ GE + YQ KLKEATW  H+FRVSV+QNEYN EKRQR+
Sbjct: 541 FNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRV 600

Query: 601 TVRSVAPVDFSAESRFLLDEIA 618
           TV+ VAP+DF+AE+R LL +I+
Sbjct: 601 TVKGVAPLDFAAETRLLLQDIS 622

BLAST of Sed0022878 vs. ExPASy Swiss-Prot
Match: Q10Q08 (Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1B PE=1 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 4.7e-234
Identity = 410/626 (65.50%), Postives = 504/626 (80.51%), Query Frame = 0

Query: 2   AKTTTPGGISKILANPSPDSAS--DVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPS 61
           A + TPG ++ +L N SPD+A+   VPE+VLQV+DLK  G R+ F A+DG  K+K +L +
Sbjct: 6   APSVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIGTRFTFLASDGKDKIKTMLLT 65

Query: 62  NLTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLE-- 121
            L  EV SGNIQNLG+IRV+DY+ N I  K EK LI+TK EVV  AL+ E+K E + +  
Sbjct: 66  QLAPEVRSGNIQNLGVIRVLDYTCNTIGEKQEKVLIITKLEVVFKALDSEIKCEAEKQEE 125

Query: 122 --TIVLKPKQECDDTSGINNG--AGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMT 181
              I+L PK+E    S   N      ++LKPKQE   KSA+QIV+EQR N AP+AR++MT
Sbjct: 126 KPAILLSPKEESVVLSKPTNAPPLPPVVLKPKQEV--KSASQIVNEQRGNAAPAARLAMT 185

Query: 182 RRVHPLVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNE 241
           RRVHPL+ LNPYQG+W IKVRVT KGNLRTYKNA+GEGCVFNV LTD DGTQIQATMFNE
Sbjct: 186 RRVHPLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQIQATMFNE 245

Query: 242 AARKFYEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETK 301
           AA+KFY  F +GKVYYIS+G+L+VANK+FKTV NDYEMTLN  + V+EA  E  FIP+ +
Sbjct: 246 AAKKFYPMFELGKVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEAEGE-TFIPQIQ 305

Query: 302 FNFVKIDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVI 361
           +NFVKID LGP+V GRELVDVIGVVQSVS T+S+RRKI+NET  KRD+ +AD++ KTV I
Sbjct: 306 YNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTI 365

Query: 362 SLWNDLATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLR 421
           SLWNDLAT  GQELLD+ D +PIIA+K LKV DFQG+SLST+ RS+I++NPD+ EA  LR
Sbjct: 366 SLWNDLATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLR 425

Query: 422 SWYDSEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYV 481
           +WYDSEGK  S++S+ S +  S   G RSMY+DRV LSHI  + +LG++KPVFFS+ AY+
Sbjct: 426 AWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYI 485

Query: 482 SFIKPDQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWF 541
           S IKPDQTMWYRACKTCNKKVTEAIGSGYWCE CQKND ECSLRYIMV++VSD +GEAW 
Sbjct: 486 SLIKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWL 545

Query: 542 STFNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ 601
           S FN++AERI+GCSADELD+++ + G++ SY LKLKEATWVPHLFRVSV+QNEY NEKRQ
Sbjct: 546 SLFNDQAERIVGCSADELDRIRKEEGDD-SYLLKLKEATWVPHLFRVSVTQNEYMNEKRQ 605

Query: 602 RMTVRSVAPVDFSAESRFLLDEIAKM 620
           R+TVRS APVD +AE++++L+EIAK+
Sbjct: 606 RITVRSEAPVDHAAEAKYMLEEIAKL 627

BLAST of Sed0022878 vs. ExPASy Swiss-Prot
Match: Q9SKI4 (Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA1A PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-84
Identity = 202/628 (32.17%), Postives = 335/628 (53.34%), Query Frame = 0

Query: 29  VLQVLDLKATG-------NRYMFTATDGDMKLKAILPSNLTSEVISGNIQNLGLIRVVDY 88
           +LQVL++K  G        RY F  +DG     A++   L   V SG  +   +++++DY
Sbjct: 23  LLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDY 82

Query: 89  SLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLETIVLKPKQECDDTSGINNGAGGIL 148
             +D+  K  K ++V   E +    E      +  ET   + ++    T  I      + 
Sbjct: 83  ICSDV--KGRKLIVVLNMETIVQQSETIGNPTIFGETDT-EAQKTFSGTGNIPPPNRVVF 142

Query: 149 LKPK-QEFVSKSAAQIVH-EQRTNMAPSARMSM---------------------TRRVHP 208
            +P  Q  V+++  + V+ + + N  PS R S+                       RV P
Sbjct: 143 NEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPASYRNHGPIMKNEAPARVIP 202

Query: 209 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 268
           +  LNPYQG W IK RVT KG++R Y NA+G+G VF+  L D DG +I+ T FN    +F
Sbjct: 203 IAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRF 262

Query: 269 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 328
           Y+   VGKVY IS+G+LK A K F  ++N++E+ L   S V+   +E   IP+ +F+F  
Sbjct: 263 YDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRP 322

Query: 329 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 388
           I  +  +     ++DVIGVV SV+ ++ I RK   ET  +R + + DE+ K V ++LW +
Sbjct: 323 ISDI-ENAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGE 382

Query: 389 LATNLGQELLDVADQS--PIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWY 448
                G++L ++ D +  P++A+K  KV DF G S+ TIS + + INPD  EAH LR+W+
Sbjct: 383 FCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWF 442

Query: 449 DSEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFI 508
           D  GK  +  S+S    P    G  S    R ++S I +      +KP + +++A +SFI
Sbjct: 443 DYGGKDTASFSISRDTMP----GGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFI 502

Query: 509 KPDQTMWYRAC------KTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGE 568
           K D +  Y AC      K CNKKVT +  + + C+ C +  +EC  RY++ V++ D +G 
Sbjct: 503 KTD-SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGL 562

Query: 569 AWFSTFNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNE 619
            W + F E  E I+GC A +L  +K ++ +E  +   +++  +  ++ ++ + +  Y +E
Sbjct: 563 TWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDE 622

BLAST of Sed0022878 vs. ExPASy Swiss-Prot
Match: Q6YZ49 (Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1A PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.7e-82
Identity = 205/671 (30.55%), Postives = 345/671 (51.42%), Query Frame = 0

Query: 6   TPGGISKILANPSPDSASDVPEVVLQVLDLKAT---------GNRYMFTATDGDMKLKAI 65
           TP G++  LA  +        + VLQ+++L+           G R+    +DG     A+
Sbjct: 7   TPNGVAAALAGDTN------LKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSAL 66

Query: 66  LPSNLTSEVISGNIQNLGLIRVVDYSLNDIPNKS-----EKYLIVTKCEVVS-----SAL 125
             + L+    SG ++   ++++ +Y +N++  +         ++V++CE++      S  
Sbjct: 67  FAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTALSET 126

Query: 126 EKEVKTEVKLETIVLKPK-------------QECDDTSGINNGAGGILLKPKQEFVSKSA 185
              +    ++E     P+             +  D+     N   G        F ++ +
Sbjct: 127 GSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAG----NSSNFATRPS 186

Query: 186 AQIVHEQRTNMAPSARMSMTRRVH-------------PLVCLNPYQGDWTIKVRVTDKGN 245
            ++   Q T + PS R +   + H             P+  LNPYQG W IK RVT KG+
Sbjct: 187 DKVPVFQPT-VQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGD 246

Query: 246 LRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKFYEKFAVGKVYYISRGTLKVANK 305
           +R Y NA+G+G VF+  L D DG +I+ T FN    +FYE   VGKVY +SRG L+ A K
Sbjct: 247 IRRYHNAKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQK 306

Query: 306 KFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVKIDMLGPHVNGRELVDVIGVVQS 365
            +  + N++E+ L   S VD   +E + IP  +F+F  I+ +    N   ++D+IGVV S
Sbjct: 307 NYNHLNNEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQN-NAILDIIGVVTS 366

Query: 366 VSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWNDLATNLGQELLDVADQS--PIIA 425
           V+   +I+RK   ET  KR + + D + ++V +++W D     G +L  + ++   P++A
Sbjct: 367 VNPCTTIQRKNGMET-QKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLA 426

Query: 426 VKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDSEGKAISLSSVSSGLSP-SSK 485
           VK  KV DF G S+ TIS + + INPD  EAH LR W+DS G+  S  S+S  ++P +S+
Sbjct: 427 VKAGKVSDFSGKSVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASR 486

Query: 486 SGLRSMYADRVSLSHILQNKSLG-EEKPVFFSIRAYVSFIKPDQTMWYRAC------KTC 545
           + +R   A        ++++ LG  +KP + +++A V F K +++ +Y AC      + C
Sbjct: 487 NEIRKTVAQ-------IKDEGLGMGDKPDWITVKATVIFFK-NESFFYTACPNMIGDRQC 546

Query: 546 NKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNEEAERIIGCSADE 605
           NKKVT++    + C+ C +  EEC  RY++  ++ D SG AW + F E  + ++GCSA E
Sbjct: 547 NKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATE 606

Query: 606 LDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVRSVAPVDFSAESR 622
           L+ LK +  E+  +   +    +  +L R+ V +  Y +E++ + T   V  VD S ES+
Sbjct: 607 LNALKER--EDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESK 654

BLAST of Sed0022878 vs. ExPASy TrEMBL
Match: A0A6J1I6K6 (Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111470404 PE=3 SV=1)

HSP 1 Score: 1105.5 bits (2858), Expect = 0.0e+00
Identity = 562/624 (90.06%), Postives = 594/624 (95.19%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   TPGGISKILANPSPDSASDVP+VVLQVLDLKATGNRYMFTA DGDMKLK+ILPSN
Sbjct: 1   MANAPTPGGISKILANPSPDSASDVPQVVLQVLDLKATGNRYMFTAADGDMKLKSILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLE--T 120
           LTSEVISGNIQNLGLIRV+DYSLNDIPNK EKYLIVTKCEVVSSAL+KEVK+EVK E   
Sbjct: 61  LTSEVISGNIQNLGLIRVLDYSLNDIPNKPEKYLIVTKCEVVSSALDKEVKSEVKKEEAD 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPKQE DD S +N G+ GILLKPKQE V+KSAAQIVHEQRTNMAPSARMSMTRRVHP
Sbjct: 121 IVLKPKQELDDKSAVNTGS-GILLKPKQELVAKSAAQIVHEQRTNMAPSARMSMTRRVHP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVL DEDGTQIQATMFNEAARKF
Sbjct: 181 LVYLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLADEDGTQIQATMFNEAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE +NEAAF+PETKFNFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVTNEAAFVPETKFNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGRELVDVIGVVQSVS TMSIRRKINNETA KRDVTIADETKKTVV+SLWND
Sbjct: 301 IDMLGPHVNGRELVDVIGVVQSVSPTMSIRRKINNETAPKRDVTIADETKKTVVVSLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ DQSPIIA+K+L+VGDFQGVSLSTISRSSILINPD+KEAH LRSWYDS
Sbjct: 361 LATTVGQELLDIVDQSPIIALKYLRVGDFQGVSLSTISRSSILINPDIKEAHQLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKAIS++SVSSG+SPSSKSG RSMY DRVSLSHILQNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAISMASVSSGMSPSSKSGSRSMYTDRVSLSHILQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVT+AIGSGYWCESCQKNDEECSLRYIMVVRVSDAS EAW STFN 
Sbjct: 481 DQTMWYRACKTCNKKVTDAIGSGYWCESCQKNDEECSLRYIMVVRVSDASCEAWLSTFNA 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERI+GC+A+ELD LKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIVGCTAEELDGLKSQIGEEASYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. ExPASy TrEMBL
Match: A0A6J1F085 (Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111440985 PE=3 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 561/624 (89.90%), Postives = 593/624 (95.03%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   TPGGISKILANPSPDSASDVP+VVLQVLDLKATGNRYMFTA DGDMKLK+ILPSN
Sbjct: 1   MANAPTPGGISKILANPSPDSASDVPQVVLQVLDLKATGNRYMFTAADGDMKLKSILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLE--T 120
           LTSEVISGNIQNLGLIRV+DYSLNDIPNK EKYLIVTKCEVVSSALEKEVK EVK E   
Sbjct: 61  LTSEVISGNIQNLGLIRVLDYSLNDIPNKPEKYLIVTKCEVVSSALEKEVKFEVKKEEAD 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPKQE DD S +N G+ GILLKPKQE V+KSAAQIVHEQ TNMAPSARMSMTRRVHP
Sbjct: 121 IVLKPKQELDDKSAVNTGS-GILLKPKQELVAKSAAQIVHEQSTNMAPSARMSMTRRVHP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF
Sbjct: 181 LVYLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE +NEAAF+PETKFNFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVTNEAAFVPETKFNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDV+GVVQSVS TMSIRRKINNETA KRDVTIADETKKTVV+SLWND
Sbjct: 301 IDMLGPHVNGRDLVDVVGVVQSVSPTMSIRRKINNETAPKRDVTIADETKKTVVVSLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ DQSPIIA+K+L+VGDFQGVSLSTISRSSILINPD+KEAH LRSWYDS
Sbjct: 361 LATTVGQELLDIVDQSPIIALKYLRVGDFQGVSLSTISRSSILINPDIKEAHQLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKAIS++SVSSG+SPSSKSG RSMY DRVSLSHILQNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAISMASVSSGMSPSSKSGSRSMYTDRVSLSHILQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVT+AIGSGYWCESCQKNDEECSLRYIMVVRVSDAS EAW STFN 
Sbjct: 481 DQTMWYRACKTCNKKVTDAIGSGYWCESCQKNDEECSLRYIMVVRVSDASCEAWLSTFNA 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERI+GC+A+ELD LKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIVGCTAEELDGLKSQIGEEASYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. ExPASy TrEMBL
Match: A0A0A0LSG2 (Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_1G013800 PE=3 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 552/624 (88.46%), Postives = 593/624 (95.03%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   T GGISK+L+NPSPDS SDVP+VV+QV+DLKATGNRYMFTA+DG MKLKAILPSN
Sbjct: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLET-- 120
           LTS+VISGNIQNLGLIR++DYSLNDIPNKSEKYLIVTKCEVVS ALEKEVKTEVK E   
Sbjct: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
            +LKPK E DD S  NNG+ GI+LKPKQE V+KSAAQIVHEQR NMAP+ARMSMTRRV P
Sbjct: 121 TILKPKVELDDKSTFNNGS-GIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPY GDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFN+AARKF
Sbjct: 181 LVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE SNEAAF+PETK+NFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDVIGVVQ+VSSTMSIRRKINNETA KRDVTIADETKKTVVISLWND
Sbjct: 301 IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ADQSPIIA+K+L+VGDFQGVSLSTISRSSI INPD+KEAHDLRSWYDS
Sbjct: 361 LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDS 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKA+S+SSVSSGLSPS+KSG RSMY+DR+SLSHIL+NKSLGEEKP FFSIRAYVSFIKP
Sbjct: 421 EGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVTEAIGSGYWC++CQKNDEECSLRYIMVVRVSDASGEAW STFNE
Sbjct: 481 DQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNE 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERI+GCSADELDQLKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. ExPASy TrEMBL
Match: A0A5A7UTE7 (Replication protein A subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003010 PE=3 SV=1)

HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 552/624 (88.46%), Postives = 592/624 (94.87%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   T GGISKIL+NPSPDS +DVP+VV+QV+DLKATGNRYMFTA+DGDMKLKAILPSN
Sbjct: 1   MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLET-- 120
           LTS+VISGNIQNLGLIR++DYSLNDIPNKS+KYLIV KC VVS ALEKEVKTEVK E   
Sbjct: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSDKYLIVAKCVVVSPALEKEVKTEVKKEEAG 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPK E DD S  NNG+ GILLKPKQE V+KSAAQIVHEQR NMAP+ARMSMTRRV P
Sbjct: 121 IVLKPKVELDDKSKFNNGS-GILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPY GDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFN+AARKF
Sbjct: 181 LVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE S+EAAF+PETK+NFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDVIGVVQ+VSSTMSIRRKINNETA KRDVTIADETKKTVVISLWND
Sbjct: 301 IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ADQSPIIAVK+L+VGDFQGVSLSTISRSSI INPD+KEAHDLRSWYD+
Sbjct: 361 LATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDA 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKA+S+SSVSSG+SPS+KSG RSMY+DRVSLSHI QNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAVSMSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVTEAIGSGYWC++CQKNDEECSLRYIMVVRVSDASGE W STFNE
Sbjct: 481 DQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEVWVSTFNE 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERIIGCSADELDQLKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. ExPASy TrEMBL
Match: A0A1S3BX02 (Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103494045 PE=3 SV=1)

HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 552/624 (88.46%), Postives = 592/624 (94.87%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           MA   T GGISKIL+NPSPDS +DVP+VV+QV+DLKATGNRYMFTA+DGDMKLKAILPSN
Sbjct: 1   MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSN 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLET-- 120
           LTS+VISGNIQNLGLIR++DYSLNDIPNKS+KYLIV KC VVS ALEKEVKTEVK E   
Sbjct: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSDKYLIVAKCVVVSPALEKEVKTEVKKEEAG 120

Query: 121 IVLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHP 180
           IVLKPK E DD S  NNG+ GILLKPKQE V+KSAAQIVHEQR NMAP+ARMSMTRRV P
Sbjct: 121 IVLKPKVELDDKSKFNNGS-GILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQP 180

Query: 181 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 240
           LV LNPY GDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFN+AARKF
Sbjct: 181 LVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKF 240

Query: 241 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 300
           YEKF++GKVYY+SRGTLKVANKKFKTVQNDYEMTLNV SQVDE S+EAAF+PETK+NFVK
Sbjct: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVK 300

Query: 301 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 360
           IDMLGPHVNGR+LVDVIGVVQ+VSSTMSIRRKINNETA KRDVTIADETKKTVVISLWND
Sbjct: 301 IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 360

Query: 361 LATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDS 420
           LAT +GQELLD+ADQSPIIAVK+L+VGDFQGVSLSTISRSSI INPD+KEAHDLRSWYD+
Sbjct: 361 LATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDA 420

Query: 421 EGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKP 480
           EGKA+S+SSVSSG+SPS+KSG RSMY+DRVSLSHI QNKSLGEEKP+FFSIRAYVSFIKP
Sbjct: 421 EGKAVSMSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNE 540
           DQTMWYRACKTCNKKVTEAIGSGYWC++CQKNDEECSLRYIMVVRVSDASGE W STFNE
Sbjct: 481 DQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEVWVSTFNE 540

Query: 541 EAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVR 600
           EAERIIGCSADELDQLKSQIGEE+SYQLKLKEATWVPHLFRVSVSQNEYNNEKRQR+TVR
Sbjct: 541 EAERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600

Query: 601 SVAPVDFSAESRFLLDEIAKMKAS 623
           SVAPVDF+AESRFLL+EIAKMKAS
Sbjct: 601 SVAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Sed0022878 vs. TAIR 10
Match: AT5G08020.1 (RPA70-kDa subunit B )

HSP 1 Score: 859.0 bits (2218), Expect = 2.4e-249
Identity = 425/623 (68.22%), Postives = 517/623 (82.99%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           M  + T  GI+ +LAN S DS+S  PE+V+QV+DLK  GNRY F+A DG MK+KA+LP+ 
Sbjct: 1   MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAGNRYTFSANDGKMKIKAMLPAT 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKS-EKYLIVTKCEVVSSALEKEVKTEVKLETI 120
           LTS++ISG IQNLGLIR+++Y++NDIP KS EKY+++TKCE V+SAL+ E+K E+K  T 
Sbjct: 61  LTSDIISGKIQNLGLIRLLEYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAEIKAST- 120

Query: 121 VLKPKQECDDTSGINNGAGGILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRRVHPL 180
                              GI+LKPK EFV+KSA+QI++EQR N AP+ARM+MTRRVHPL
Sbjct: 121 -------------------GIMLKPKHEFVAKSASQIINEQRGNAAPAARMAMTRRVHPL 180

Query: 181 VCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKFY 240
           V LNPYQG WTIKVRVT+KG +RTYKNA+GEGCVFNV LTDE+GTQIQATMFN AARKFY
Sbjct: 181 VSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFY 240

Query: 241 EKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVKI 300
           ++F +GKVYYISRG+LK+ANK+FKTVQNDYEMTLN  S+V+EASNE  F PETKFNFV I
Sbjct: 241 DRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPI 300

Query: 301 DMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWNDL 360
           D LG +VN ++L+DVIGVVQSVS TMSIRRK +NE   KRD+T+ADETKKTVV+SLWNDL
Sbjct: 301 DELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDL 360

Query: 361 ATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYDSE 420
           AT +GQELLD+AD  P+IA+K LKVG FQGVSLSTISRS+++INP+  EA  L+SWYD+E
Sbjct: 361 ATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDAE 420

Query: 421 GKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIKPD 480
           GK  S+S++ SG+S S+ +G RSMY+DRV LSHI  N SLGEEKPVFFS RAY+SFIKPD
Sbjct: 421 GKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPD 480

Query: 481 QTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFSTFNEE 540
           QTMWYRACKTCNKKVTEA+ SGYWCESCQK D+ECSLRYIM V+VSD++GE W S FN+E
Sbjct: 481 QTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDE 540

Query: 541 AERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRMTVRS 600
           AE+IIGC+AD+L+ LKS+ GE + +Q KLKEATW  HLFR+SVSQ EYN+EKRQR+TVR 
Sbjct: 541 AEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRG 600

Query: 601 VAPVDFSAESRFLLDEIAKMKAS 623
           V+P+DF+AE+R LL +I+K K S
Sbjct: 601 VSPIDFAAETRLLLQDISKNKTS 603

BLAST of Sed0022878 vs. TAIR 10
Match: AT5G61000.1 (Replication factor-A protein 1-related )

HSP 1 Score: 845.5 bits (2183), Expect = 2.7e-245
Identity = 420/622 (67.52%), Postives = 520/622 (83.60%), Query Frame = 0

Query: 1   MAKTTTPGGISKILANPSPDSASDVPEVVLQVLDLKATGNRYMFTATDGDMKLKAILPSN 60
           M  + TP  IS +L+NPS DS+SD  E+V+QV+DLK  GNRY F+A DG  K+KA+  ++
Sbjct: 1   MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGNRYTFSANDGKTKVKAMFTAS 60

Query: 61  LTSEVISGNIQNLGLIRVVDYSLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKL-ETI 120
           LT E+ISG IQNLGLIR++D+++NDI +KS KY +VTKCE V S L+ E+  + K  E  
Sbjct: 61  LTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLDSKSGEEE 120

Query: 121 VLKPKQ---ECDDTSGINNGAG-GILLKPKQEFVSKSAAQIVHEQRTNMAPSARMSMTRR 180
             +PK+   E    S +N+    GI LKPKQEFV+KSA+QI+ EQR N AP+ARM+MTRR
Sbjct: 121 AREPKKQKLEHSPVSPLNDVVSTGITLKPKQEFVAKSASQIMSEQRGNAAPAARMAMTRR 180

Query: 181 VHPLVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAA 240
           VHPLV LNPYQG+WTIKVRVT+KG +R YKNA+GEGCVFNV LTDE+GTQIQATMFN+AA
Sbjct: 181 VHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAA 240

Query: 241 RKFYEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFN 300
           RKF+++F +GKVYYISRG+LK+ANK+FKTVQNDYEMTLN  S+V+EAS+E  FIPETKFN
Sbjct: 241 RKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFN 300

Query: 301 FVKIDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISL 360
           FV I+ LG +VN +EL+D+IGVVQSVS TMSIRR+ +NE   KRD+T+ADE++KTVV+SL
Sbjct: 301 FVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSL 360

Query: 361 WNDLATNLGQELLDVADQSPIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSW 420
           WNDLAT +GQELLD+ADQSP+IA+K LKVGDFQGVSLSTISRS+++INP+  EA  L+SW
Sbjct: 361 WNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSW 420

Query: 421 YDSEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSF 480
           +DSEGK IS+SS+ SG+SPS+K+G RS+Y DRV LSHI  N SL EEKPVFFS RAY+SF
Sbjct: 421 FDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISF 480

Query: 481 IKPDQTMWYRACKTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEAWFST 540
           IKPDQTMWY+ACKTCNKKVTEA+ SGYWCE CQ+  EECSLRYIM V+V+D+SGE W S+
Sbjct: 481 IKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISS 540

Query: 541 FNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRM 600
           FN+EAE+I+GCSADEL++LKS+ GE + YQ KLKEATW  H+FRVSV+QNEYN EKRQR+
Sbjct: 541 FNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRV 600

Query: 601 TVRSVAPVDFSAESRFLLDEIA 618
           TV+ VAP+DF+AE+R LL +I+
Sbjct: 601 TVKGVAPLDFAAETRLLLQDIS 622

BLAST of Sed0022878 vs. TAIR 10
Match: AT2G06510.1 (replication protein A 1A )

HSP 1 Score: 315.5 bits (807), Expect = 9.8e-86
Identity = 202/628 (32.17%), Postives = 335/628 (53.34%), Query Frame = 0

Query: 29  VLQVLDLKATG-------NRYMFTATDGDMKLKAILPSNLTSEVISGNIQNLGLIRVVDY 88
           +LQVL++K  G        RY F  +DG     A++   L   V SG  +   +++++DY
Sbjct: 23  LLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDY 82

Query: 89  SLNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLETIVLKPKQECDDTSGINNGAGGIL 148
             +D+  K  K ++V   E +    E      +  ET   + ++    T  I      + 
Sbjct: 83  ICSDV--KGRKLIVVLNMETIVQQSETIGNPTIFGETDT-EAQKTFSGTGNIPPPNRVVF 142

Query: 149 LKPK-QEFVSKSAAQIVH-EQRTNMAPSARMSM---------------------TRRVHP 208
            +P  Q  V+++  + V+ + + N  PS R S+                       RV P
Sbjct: 143 NEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPASYRNHGPIMKNEAPARVIP 202

Query: 209 LVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKF 268
           +  LNPYQG W IK RVT KG++R Y NA+G+G VF+  L D DG +I+ T FN    +F
Sbjct: 203 IAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRF 262

Query: 269 YEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVK 328
           Y+   VGKVY IS+G+LK A K F  ++N++E+ L   S V+   +E   IP+ +F+F  
Sbjct: 263 YDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRP 322

Query: 329 IDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWND 388
           I  +  +     ++DVIGVV SV+ ++ I RK   ET  +R + + DE+ K V ++LW +
Sbjct: 323 ISDI-ENAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGE 382

Query: 389 LATNLGQELLDVADQS--PIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWY 448
                G++L ++ D +  P++A+K  KV DF G S+ TIS + + INPD  EAH LR+W+
Sbjct: 383 FCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWF 442

Query: 449 DSEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFI 508
           D  GK  +  S+S    P    G  S    R ++S I +      +KP + +++A +SFI
Sbjct: 443 DYGGKDTASFSISRDTMP----GGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFI 502

Query: 509 KPDQTMWYRAC------KTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGE 568
           K D +  Y AC      K CNKKVT +  + + C+ C +  +EC  RY++ V++ D +G 
Sbjct: 503 KTD-SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGL 562

Query: 569 AWFSTFNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNE 619
            W + F E  E I+GC A +L  +K ++ +E  +   +++  +  ++ ++ + +  Y +E
Sbjct: 563 TWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDE 622

BLAST of Sed0022878 vs. TAIR 10
Match: AT2G06510.2 (replication protein A 1A )

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-84
Identity = 200/627 (31.90%), Postives = 333/627 (53.11%), Query Frame = 0

Query: 30  LQVLDLKATG-------NRYMFTATDGDMKLKAILPSNLTSEVISGNIQNLGLIRVVDYS 89
           + VL++K  G        RY F  +DG     A++   L   V SG  +   +++++DY 
Sbjct: 1   MPVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYI 60

Query: 90  LNDIPNKSEKYLIVTKCEVVSSALEKEVKTEVKLETIVLKPKQECDDTSGINNGAGGILL 149
            +D+  K  K ++V   E +    E      +  ET   + ++    T  I      +  
Sbjct: 61  CSDV--KGRKLIVVLNMETIVQQSETIGNPTIFGETDT-EAQKTFSGTGNIPPPNRVVFN 120

Query: 150 KPK-QEFVSKSAAQIVH-EQRTNMAPSARMSM---------------------TRRVHPL 209
           +P  Q  V+++  + V+ + + N  PS R S+                       RV P+
Sbjct: 121 EPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPASYRNHGPIMKNEAPARVIPI 180

Query: 210 VCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNEAARKFY 269
             LNPYQG W IK RVT KG++R Y NA+G+G VF+  L D DG +I+ T FN    +FY
Sbjct: 181 AALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFY 240

Query: 270 EKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEASNEAAFIPETKFNFVKI 329
           +   VGKVY IS+G+LK A K F  ++N++E+ L   S V+   +E   IP+ +F+F  I
Sbjct: 241 DVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPI 300

Query: 330 DMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVTIADETKKTVVISLWNDL 389
             +  +     ++DVIGVV SV+ ++ I RK   ET  +R + + DE+ K V ++LW + 
Sbjct: 301 SDI-ENAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGEF 360

Query: 390 ATNLGQELLDVADQS--PIIAVKHLKVGDFQGVSLSTISRSSILINPDMKEAHDLRSWYD 449
               G++L ++ D +  P++A+K  KV DF G S+ TIS + + INPD  EAH LR+W+D
Sbjct: 361 CNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFD 420

Query: 450 SEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLGEEKPVFFSIRAYVSFIK 509
             GK  +  S+S    P    G  S    R ++S I +      +KP + +++A +SFIK
Sbjct: 421 YGGKDTASFSISRDTMP----GGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIK 480

Query: 510 PDQTMWYRAC------KTCNKKVTEAIGSGYWCESCQKNDEECSLRYIMVVRVSDASGEA 569
            D +  Y AC      K CNKKVT +  + + C+ C +  +EC  RY++ V++ D +G  
Sbjct: 481 TD-SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLT 540

Query: 570 WFSTFNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEATWVPHLFRVSVSQNEYNNEK 619
           W + F E  E I+GC A +L  +K ++ +E  +   +++  +  ++ ++ + +  Y +E+
Sbjct: 541 WITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQ 600

BLAST of Sed0022878 vs. TAIR 10
Match: AT5G45400.1 (Replication factor-A protein 1-related )

HSP 1 Score: 291.6 bits (745), Expect = 1.5e-78
Identity = 164/468 (35.04%), Postives = 266/468 (56.84%), Query Frame = 0

Query: 163 NMAPSARMSMTRRVHPLVCLNPYQGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDED 222
           N  P AR     R++P+  LNPYQG WTIKVRVT K +LR + N +GEG +F+  L D D
Sbjct: 286 NRGPVARNEAPPRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDAD 345

Query: 223 GTQIQATMFNEAARKFYEKFAVGKVYYISRGTLKVANKKFKTVQNDYEMTLNVYSQVDEA 282
           G +I+ T FN+A  +F++K  VG VY ISRG LK A K F  + NDYE+ L+  S +   
Sbjct: 346 GGEIRVTCFNDAVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC 405

Query: 283 SNEAAFIPETKFNFVKIDMLGPHVNGRELVDVIGVVQSVSSTMSIRRKINNETAAKRDVT 342
            ++   IP   F+F  I  +  ++      DVIG+V S+S T++I RK N     KR + 
Sbjct: 406 EDDGT-IPRYHFHFRNIGDI-ENMENNSTTDVIGIVSSISPTVAIMRK-NLTEVQKRSLQ 465

Query: 343 IADETKKTVVISLWNDLATNLGQELLDVADQS--PIIAVKHLKVGDFQGVSLSTISRSSI 402
           + D + ++V +++W +     GQ+L ++ D    P++A+K  ++G+F G  +STI  S  
Sbjct: 466 LKDMSGRSVEVTMWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQF 525

Query: 403 LINPDMKEAHDLRSWYDSEGKAISLSSVSSGLSPSSKSGLRSMYADRVSLSHILQNKSLG 462
            I PD  EA +LR WY+ EG+    +S+S   S   +  +R + A        ++++ LG
Sbjct: 526 FIEPDFPEARELRQWYEREGRNAHFTSISREFSGVGRQEVRKVIAQ-------IKDEKLG 585

Query: 463 -EEKPVFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYW-CESCQKNDE 522
             EKP + ++ A +SF+K  +   Y AC      + C+KKVT   G G W CE C K  +
Sbjct: 586 TSEKPDWITVCATISFMKV-ENFCYTACPIMNGDRPCSKKVTNN-GDGTWRCEKCDKCVD 645

Query: 523 ECSLRYIMVVRVSDASGEAWFSTFNEEAERIIGCSADELDQLKSQIGEESSYQLKLKEAT 582
           EC  RYI+ +++ D +   W + F E  E I+G SA +L  +K +  +E  ++  ++   
Sbjct: 646 ECDYRYILQIQLQDHTDLTWATAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVA 705

Query: 583 WVPHLFRVSVSQNEYNNEKRQRMTVRSVAPVDFSAESRFLLDEIAKMK 621
           +  ++F++ + +  Y++E+R + TV     +++S+ +RF+L+ I K+K
Sbjct: 706 FTKYIFKLKIKEETYSDEQRVKATVVKAEKLNYSSNTRFMLEAIDKLK 741

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022971740.10.0e+0090.06replication protein A 70 kDa DNA-binding subunit B [Cucurbita maxima][more]
KAG6587586.10.0e+0090.22Replication protein A 70 kDa DNA-binding subunit B, partial [Cucurbita argyrospe... [more]
XP_022933609.10.0e+0089.90replication protein A 70 kDa DNA-binding subunit B-like [Cucurbita moschata][more]
XP_023530839.10.0e+0090.06replication protein A 70 kDa DNA-binding subunit B [Cucurbita pepo subsp. pepo][more]
XP_038878718.10.0e+0088.94replication protein A 70 kDa DNA-binding subunit B-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9SD823.3e-24868.22Replication protein A 70 kDa DNA-binding subunit B OS=Arabidopsis thaliana OX=37... [more]
Q9FME03.8e-24467.52Replication protein A 70 kDa DNA-binding subunit D OS=Arabidopsis thaliana OX=37... [more]
Q10Q084.7e-23465.50Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japoni... [more]
Q9SKI41.4e-8432.17Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=37... [more]
Q6YZ493.7e-8230.55Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japoni... [more]
Match NameE-valueIdentityDescription
A0A6J1I6K60.0e+0090.06Replication protein A subunit OS=Cucurbita maxima OX=3661 GN=LOC111470404 PE=3 S... [more]
A0A6J1F0850.0e+0089.90Replication protein A subunit OS=Cucurbita moschata OX=3662 GN=LOC111440985 PE=3... [more]
A0A0A0LSG20.0e+0088.46Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_1G013800 PE=3 SV... [more]
A0A5A7UTE70.0e+0088.46Replication protein A subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A1S3BX020.0e+0088.46Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103494045 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G08020.12.4e-24968.22RPA70-kDa subunit B [more]
AT5G61000.12.7e-24567.52Replication factor-A protein 1-related [more]
AT2G06510.19.8e-8632.17replication protein A 1A [more]
AT2G06510.21.1e-8431.90replication protein A 1A [more]
AT5G45400.11.5e-7835.04Replication factor-A protein 1-related [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 537..557
NoneNo IPR availableGENE3D2.40.50.140coord: 430..619
e-value: 2.9E-52
score: 178.7
NoneNo IPR availableGENE3D2.40.50.140coord: 173..281
e-value: 1.8E-34
score: 120.1
NoneNo IPR availableGENE3D2.40.50.140coord: 5..112
e-value: 2.3E-13
score: 52.1
NoneNo IPR availableGENE3D2.40.50.140coord: 289..429
e-value: 3.8E-39
score: 135.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 5..617
NoneNo IPR availablePANTHERPTHR23273:SF32REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-RELATEDcoord: 5..617
NoneNo IPR availableCDDcd04474RPA1_DBD_Acoord: 178..274
e-value: 2.65322E-44
score: 151.245
NoneNo IPR availableCDDcd04475RPA1_DBD_Bcoord: 311..417
e-value: 6.68801E-35
score: 125.389
IPR004591Replication factor A protein 1TIGRFAMTIGR00617TIGR00617coord: 3..618
e-value: 3.6E-191
score: 634.7
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 189..275
e-value: 1.9E-10
score: 40.6
IPR013955Replication factor A, C-terminalPFAMPF08646Rep_fac-A_Ccoord: 466..612
e-value: 2.3E-45
score: 153.9
IPR013955Replication factor A, C-terminalCDDcd04476RPA1_DBD_Ccoord: 454..618
e-value: 2.29051E-54
score: 180.967
IPR007199Replication factor-A protein 1, N-terminalPFAMPF04057Rep-A_Ncoord: 6..103
e-value: 2.5E-21
score: 75.6
IPR031657Replication protein A, OB domainPFAMPF16900REPA_OB_2coord: 307..403
e-value: 5.9E-22
score: 77.4
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 444..619
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 177..285
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 294..423
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0022878.1Sed0022878.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0007004 telomere maintenance via telomerase
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
cellular_component GO:0005662 DNA replication factor A complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0043047 single-stranded telomeric DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding