Sed0022871 (gene) Chayote v1

Overview


Name	Sed0022871
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MYB transcription factor 13
Location	LG13: 22876765 .. 22877629 (+)
RNA-Seq Expression	Sed0022871
Synteny	Sed0022871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTCGCCGCCGCCGCTCTTCCTTTTTTTTTCTCCCATTGATGGCTACCGCCGACCGGATTAAGGGTCCATGGACTCCCGACGAGGATCAGCTATTGCGCCGTCTCGTCCACAACCTCGGCCCAAGGAATTGGTCTCTGATTAGCAAATCAATCCCCGGCAGATCCGGCAAGTCCTGCCGTCTCCGGTGGTGCAACCAGCTCTCGCCGGAGCTACAGCACCGCCCCTTCACTCCCGAAGAAGACGACACCATCATCACCGCCCACTCCAGATTCGGCAACAAATGGGCCGCCATTGCCCGTTTCCTCAACGGCCGCACCGACAACGCCATAAAAAACCACTGGAACTCCACCCTCAAACGCAAATCCTCCTCCGACGCCGATTTCCAACCCCGCCAGAAAAGATCGCCGTTCAACCCCGGCAGCCCCTCTGCCTCCGATTCGAGCGATTCCACGCAACCGGATCCTCCCACCTCGCTCAGCCTCGGGTTGCCCGGGTCCGACCCGGAACCCAACCAGGGTCCGAACAAGAAATTCTTCAGCGCGGAGTTCTTGGGCGTGATGCAGGAAATGATCAGAAAAGAAGTGCAGAATTACATGTCTGGGATTGAGCAAAACGGCATGTATTTTCAGCCGGAGGTTCTTACAAACGCTGTGGTCAAACGGATTGGGATTAGCAAGCTCGATTAGTGGTTTCATTTCTTCTTTTTCCGCTAATAAGTAAGTGTACAGAAGAACAAGGTGGAGATCTTCGAATCATTTAGATACAGAGTATAATATATGATACAATTAGATCATCGGTTTAAGTGGCGAATTCCTGTTCGTTTCAATCAAGTATATATATATGCAAGCAATTTATTATTATTA

mRNA sequence

CCGTCGCCGCCGCCGCTCTTCCTTTTTTTTTCTCCCATTGATGGCTACCGCCGACCGGATTAAGGGTCCATGGACTCCCGACGAGGATCAGCTATTGCGCCGTCTCGTCCACAACCTCGGCCCAAGGAATTGGTCTCTGATTAGCAAATCAATCCCCGGCAGATCCGGCAAGTCCTGCCGTCTCCGGTGGTGCAACCAGCTCTCGCCGGAGCTACAGCACCGCCCCTTCACTCCCGAAGAAGACGACACCATCATCACCGCCCACTCCAGATTCGGCAACAAATGGGCCGCCATTGCCCGTTTCCTCAACGGCCGCACCGACAACGCCATAAAAAACCACTGGAACTCCACCCTCAAACGCAAATCCTCCTCCGACGCCGATTTCCAACCCCGCCAGAAAAGATCGCCGTTCAACCCCGGCAGCCCCTCTGCCTCCGATTCGAGCGATTCCACGCAACCGGATCCTCCCACCTCGCTCAGCCTCGGGTTGCCCGGGTCCGACCCGGAACCCAACCAGGGTCCGAACAAGAAATTCTTCAGCGCGGAGTTCTTGGGCGTGATGCAGGAAATGATCAGAAAAGAAGTGCAGAATTACATGTCTGGGATTGAGCAAAACGGCATGTATTTTCAGCCGGAGGTTCTTACAAACGCTGTGGTCAAACGGATTGGGATTAGCAAGCTCGATTAGTGGTTTCATTTCTTCTTTTTCCGCTAATAAGTAAGTGTACAGAAGAACAAGGTGGAGATCTTCGAATCATTTAGATACAGAGTATAATATATGATACAATTAGATCATCGGTTTAAGTGGCGAATTCCTGTTCGTTTCAATCAAGTATATATATATGCAAGCAATTTATTATTATTA

Coding sequence (CDS)

ATGGCTACCGCCGACCGGATTAAGGGTCCATGGACTCCCGACGAGGATCAGCTATTGCGCCGTCTCGTCCACAACCTCGGCCCAAGGAATTGGTCTCTGATTAGCAAATCAATCCCCGGCAGATCCGGCAAGTCCTGCCGTCTCCGGTGGTGCAACCAGCTCTCGCCGGAGCTACAGCACCGCCCCTTCACTCCCGAAGAAGACGACACCATCATCACCGCCCACTCCAGATTCGGCAACAAATGGGCCGCCATTGCCCGTTTCCTCAACGGCCGCACCGACAACGCCATAAAAAACCACTGGAACTCCACCCTCAAACGCAAATCCTCCTCCGACGCCGATTTCCAACCCCGCCAGAAAAGATCGCCGTTCAACCCCGGCAGCCCCTCTGCCTCCGATTCGAGCGATTCCACGCAACCGGATCCTCCCACCTCGCTCAGCCTCGGGTTGCCCGGGTCCGACCCGGAACCCAACCAGGGTCCGAACAAGAAATTCTTCAGCGCGGAGTTCTTGGGCGTGATGCAGGAAATGATCAGAAAAGAAGTGCAGAATTACATGTCTGGGATTGAGCAAAACGGCATGTATTTTCAGCCGGAGGTTCTTACAAACGCTGTGGTCAAACGGATTGGGATTAGCAAGCTCGATTAG

Protein sequence

MATADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSSDADFQPRQKRSPFNPGSPSASDSSDSTQPDPPTSLSLGLPGSDPEPNQGPNKKFFSAEFLGVMQEMIRKEVQNYMSGIEQNGMYFQPEVLTNAVVKRIGISKLD

Homology

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BLAST of Sed0022871 vs. NCBI nr
Match: XP_008452606.1 (PREDICTED: transcription factor MYB44-like [Cucumis melo] >KAA0064419.1 transcription factor MYB44-like [Cucumis melo var. makuwa] >TYK20168.1 transcription factor MYB44-like [Cucumis melo var. makuwa])

HSP 1 Score: 308.5 bits (789), Expect = 4.4e-80
Identity = 171/267 (64.04%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MATADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQH 60
           MAT DRIKGPW+PDED+LLRRLVHN GPRNWSLISKSI GRSGKSCRLRWCNQLSPE++H
Sbjct: 1   MATTDRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSISGRSGKSCRLRWCNQLSPEVEH 60

Query: 61  RPFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSSDA--DFQPR 120
           RPFTP+EDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRKSSS A  D  P 
Sbjct: 61  RPFTPDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPL 120

Query: 121 QKRSP-------FNPGSPSASDSSDS------------------------------TQPD 180
           ++ +        FNP SPS SD SDS                              T  D
Sbjct: 121 KRSASVGAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKTFPPVPLISHSNQHPMETTSID 180

Query: 181 PPTSLSLGLPGSD--------PEPNQ------GPNKKFFSAEFLGVMQEMIRKEVQNYMS 215
           PPTSL+L LPGSD         E N       G  K+FFSAEFLGVMQEMIRKEVQ+YMS
Sbjct: 181 PPTSLTLSLPGSDSGEAPKHMSEGNHQSGKKAGIEKQFFSAEFLGVMQEMIRKEVQSYMS 240

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BLAST of Sed0022871 vs. NCBI nr
Match: XP_004141275.1 (transcription factor MYB44 [Cucumis sativus] >KGN55237.1 hypothetical protein Csa_012129 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-79
Identity = 171/263 (65.02%), Postives = 187/263 (71.10%), Query Frame = 0


Query: 1   MAT-ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQ 60
           MAT  DRIKGPW+PDED+LLRRLVHN GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++
Sbjct: 1   MATITDRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVE 60

Query: 61  HRPFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSSDA--DFQP 120
           HRPFT +EDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRKSSS A  D  P
Sbjct: 61  HRPFTSDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHP 120

Query: 121 RQKRSP-------FNPGSPSASDSSDS-------------------------------TQ 180
            ++ +        FNP SPS SD SDS                               T 
Sbjct: 121 LKRSTSASAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKPFPPVPPLISHSNHPPMDTTS 180

Query: 181 PDPPTSLSLGLPGSD----PEPNQGPN---KKFFSAEFLGVMQEMIRKEVQNYMSGIEQN 216
            DPPTSL+L LPGSD    P+     N   K+FFSAEFLGVMQEMIRKEVQ+YMSG+EQN
Sbjct: 181 IDPPTSLTLSLPGSDSGDAPKHMSEANRIEKQFFSAEFLGVMQEMIRKEVQSYMSGMEQN 240

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BLAST of Sed0022871 vs. NCBI nr
Match: XP_038897438.1 (transcription factor MYB44-like [Benincasa hispida])

HSP 1 Score: 305.4 bits (781), Expect = 3.8e-79
Identity = 172/266 (64.66%), Postives = 184/266 (69.17%), Query Frame = 0


Query: 5   DRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFT 64
           DRIKGPW+PDED+LLRRLVHN GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HRPFT
Sbjct: 11  DRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFT 70

Query: 65  PEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRK-SSSDADFQPRQKRSP 124
            +EDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRK SSS A+     KRS 
Sbjct: 71  SDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSSIAEHDHPLKRSA 130

Query: 125 -------FNPGSPSASDSSDS-----------------------------TQPDPPTSLS 184
                  F+P SPS SD SDS                             T  DPPTSL+
Sbjct: 131 SVGAPLYFSPSSPSGSDLSDSSLSGMSSSQLCKAFPSASLISQSDQPPMDTSIDPPTSLT 190

Query: 185 LGLPGSD--------PEPNQ----------GPNKKFFSAEFLGVMQEMIRKEVQNYMSGI 216
           L LPGSD         EP Q          G  K+FFSAEFLGVMQEMIRKEVQ+YMSGI
Sbjct: 191 LSLPGSDAGEVPKLVSEPKQAVVVQSGNKMGIEKQFFSAEFLGVMQEMIRKEVQSYMSGI 250

[Close]

BLAST of Sed0022871 vs. NCBI nr
Match: QCH41125.1 (MYB transcription factor 13 [Dimocarpus longan])

HSP 1 Score: 284.6 bits (727), Expect = 6.9e-73
Identity = 168/305 (55.08%), Postives = 181/305 (59.34%), Query Frame = 0


Query: 4   ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPF 63
           ADRIKGPW+P+ED+ L+RLV + GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HRPF
Sbjct: 8   ADRIKGPWSPEEDEALQRLVQSFGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 67

Query: 64  TPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSS-------DADFQ 123
           TPEEDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRK SS       DA   
Sbjct: 68  TPEEDDTIIRAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMSDDINDDAQNP 127

Query: 124 PRQKRSP------------FNPGSPSASDSSDSTQP------------------------ 183
              KRS              NP SPS SD SDS+ P                        
Sbjct: 128 QPLKRSASVGPGNNVSGLYLNPSSPSGSDLSDSSLPGVSHSPAYRPLLRTGSHVPVETSS 187

Query: 184 ---DPPTSLSLGLPGSD--PEPNQGP---------------------------------- 216
              DP TSLSL LPGSD     NQGP                                  
Sbjct: 188 STSDPLTSLSLSLPGSDSCEASNQGPGSGSNTVYDPNLMVQPQSRTQTPTQVAAQPLAVQ 247

[Close]

BLAST of Sed0022871 vs. NCBI nr
Match: XP_024162701.1 (transcription factor MYB44 [Rosa chinensis] >PRQ27762.1 putative transcription factor MYB-HB-like family [Rosa chinensis])

HSP 1 Score: 284.3 bits (726), Expect = 9.0e-73
Identity = 164/297 (55.22%), Postives = 184/297 (61.95%), Query Frame = 0


Query: 2   ATADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHR 61
           A ADRIKGPW+P+ED+ L+RLV + GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HR
Sbjct: 10  AAADRIKGPWSPEEDEALQRLVQSYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHR 69

Query: 62  PFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRK-SSSDADFQPRQ- 121
           PFTPEEDDTII AH+RFGNKWA I+R LNGRTDNAIKNHWNSTLKRK SS   D  P Q 
Sbjct: 70  PFTPEEDDTIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKFSSFSDDMSPEQP 129

Query: 122 -KRSP------------FNPGSPSASDSSDSTQP----------------DPPTSLSLGL 181
            KRS              NPGSPS SD SDS+ P                DPPTSLSL L
Sbjct: 130 LKRSASVGAGTTVSGLYMNPGSPSGSDLSDSSLPGVIPPSQAVRPVAPVADPPTSLSLSL 189

Query: 182 PGSDPEPNQ--------------------------------------------------- 216
           PGS+  PN                                                    
Sbjct: 190 PGSNEGPNHQRSASGSGSSWVVSPKPKAQIVQLQPQVIQAQPEEAGGGEAARQGNHNSEA 249

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BLAST of Sed0022871 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-52
Identity = 128/304 (42.11%), Postives = 167/304 (54.93%), Query Frame = 0


Query: 4   ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPF 63
           ADRIKGPW+P+ED+ LRRLV   GPRNW++ISKSIPGRSGKSCRLRWCNQLSP+++HRPF
Sbjct: 2   ADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPF 61

Query: 64  TPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKS--------SSDADF 123
           + EED+TI  AH++FGNKWA IAR LNGRTDNA+KNHWNSTLKRK             D 
Sbjct: 62  SAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDH 121

Query: 124 QPRQKR----SP-------FNPGSPSASDSSD---------------------------- 183
           +P ++     SP        +PGSP+ SD SD                            
Sbjct: 122 RPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLPI 181

Query: 184 ---STQPDPPTSLSLGLPGSD--PEPNQ-------------------------------- 216
              S+  DPPTSLSL LPG+D   E N+                                
Sbjct: 182 ETSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRG 241

[Close]

BLAST of Sed0022871 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 128/272 (47.06%), Postives = 155/272 (56.99%), Query Frame = 0


Query: 5   DRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFT 64
           +RIKGPW+P+ED LL+RLV   GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HR F+
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 65  PEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSS---SDADF------ 124
            EED+TII AH+RFGNKWA I+R LNGRTDNAIKNHWNSTLKRK S      DF      
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGGNGGY 129

Query: 125 -------QPRQKRSP----------FNPGSPSASDSSD--------------------ST 184
                  QP ++ +            +PGSPS SD S+                    S+
Sbjct: 130 DGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAHVFKPTVRSEVTASSS 189

Query: 185 QPDPPTSLSLGLPGSDP-----EP---NQG------------PNKK-------------- 195
             DPPT LSL LP +D      EP   NQ             P +K              
Sbjct: 190 GEDPPTYLSLSLPWTDETVRVNEPVQLNQNTVMDGGYTAELFPVRKEEQVEVEEEEAKGI 249

[Close]

BLAST of Sed0022871 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 123/271 (45.39%), Postives = 154/271 (56.83%), Query Frame = 0


Query: 4   ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPF 63
           ADR+KGPW+ +ED+ LRR+V   GPRNWS ISKSIPGRSGKSCRLRWCNQLSPE++HRPF
Sbjct: 2   ADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 61

Query: 64  TPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSS------------S 123
           +PEED+TI+TA ++FGNKWA IAR LNGRTDNA+KNHWNSTLKRK S             
Sbjct: 62  SPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTTVTETEE 121

Query: 124 DADFQPRQKRSP--------------FNPGSPSASDSSDST------------------- 183
           D D +P+++RS                +P SP+  D SDS+                   
Sbjct: 122 DQD-RPKKRRSVSFDSAFAPVDTGLYMSPESPNGIDVSDSSTIPSPSSPVAQLFKPMPIS 181

Query: 184 -------QP----------DPPTSLSLGLPGSD---PEPNQGPNKKFF------------ 192
                  QP          DPPTSLSL LPG++      N   N   F            
Sbjct: 182 GGFTVVPQPLPVEMSSSSEDPPTSLSLSLPGAENTSSSHNNNNNALMFPRFESQMKINVE 241

[Close]

BLAST of Sed0022871 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.8e-37
Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 5   DRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFT 64
           DR+KGPW+ +ED +L  LV  LG RNWS I++SIPGRSGKSCRLRWCNQL+P L    FT
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 65  PEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRK 109
             ED  II AH+  GNKWA IA+ L GRTDNAIKNHWNS L+R+
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRR 155

[Close]

BLAST of Sed0022871 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.2e-37
Identity = 66/103 (64.08%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 6   RIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFTP 65
           ++KGPW P++D+ L RLV   GPRNW+LIS+ IPGRSGKSCRLRWCNQL P L+ +PF+ 
Sbjct: 48  KVKGPWLPEQDEALTRLVKMCGPRNWNLISRGIPGRSGKSCRLRWCNQLDPILKRKPFSD 107

Query: 66  EEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRK 109
           EE+  I++A +  GNKW+ IA+ L GRTDNAIKNHWNS L+RK
Sbjct: 108 EEEHMIMSAQAVLGNKWSVIAKLLPGRTDNAIKNHWNSNLRRK 150

[Close]

BLAST of Sed0022871 vs. ExPASy TrEMBL
Match: A0A5D3D9I8 (Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003000 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 171/267 (64.04%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MATADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQH 60
           MAT DRIKGPW+PDED+LLRRLVHN GPRNWSLISKSI GRSGKSCRLRWCNQLSPE++H
Sbjct: 1   MATTDRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSISGRSGKSCRLRWCNQLSPEVEH 60

Query: 61  RPFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSSDA--DFQPR 120
           RPFTP+EDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRKSSS A  D  P 
Sbjct: 61  RPFTPDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPL 120

Query: 121 QKRSP-------FNPGSPSASDSSDS------------------------------TQPD 180
           ++ +        FNP SPS SD SDS                              T  D
Sbjct: 121 KRSASVGAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKTFPPVPLISHSNQHPMETTSID 180

Query: 181 PPTSLSLGLPGSD--------PEPNQ------GPNKKFFSAEFLGVMQEMIRKEVQNYMS 215
           PPTSL+L LPGSD         E N       G  K+FFSAEFLGVMQEMIRKEVQ+YMS
Sbjct: 181 PPTSLTLSLPGSDSGEAPKHMSEGNHQSGKKAGIEKQFFSAEFLGVMQEMIRKEVQSYMS 240

[Close]

BLAST of Sed0022871 vs. ExPASy TrEMBL
Match: A0A1S3BTM6 (transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103493578 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 171/267 (64.04%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MATADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQH 60
           MAT DRIKGPW+PDED+LLRRLVHN GPRNWSLISKSI GRSGKSCRLRWCNQLSPE++H
Sbjct: 1   MATTDRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSISGRSGKSCRLRWCNQLSPEVEH 60

Query: 61  RPFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSSDA--DFQPR 120
           RPFTP+EDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRKSSS A  D  P 
Sbjct: 61  RPFTPDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPL 120

Query: 121 QKRSP-------FNPGSPSASDSSDS------------------------------TQPD 180
           ++ +        FNP SPS SD SDS                              T  D
Sbjct: 121 KRSASVGAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKTFPPVPLISHSNQHPMETTSID 180

Query: 181 PPTSLSLGLPGSD--------PEPNQ------GPNKKFFSAEFLGVMQEMIRKEVQNYMS 215
           PPTSL+L LPGSD         E N       G  K+FFSAEFLGVMQEMIRKEVQ+YMS
Sbjct: 181 PPTSLTLSLPGSDSGEAPKHMSEGNHQSGKKAGIEKQFFSAEFLGVMQEMIRKEVQSYMS 240

[Close]

BLAST of Sed0022871 vs. ExPASy TrEMBL
Match: A0A0A0L3P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641690 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.3e-80
Identity = 171/263 (65.02%), Postives = 187/263 (71.10%), Query Frame = 0


Query: 1   MAT-ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQ 60
           MAT  DRIKGPW+PDED+LLRRLVHN GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++
Sbjct: 1   MATITDRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVE 60

Query: 61  HRPFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSSDA--DFQP 120
           HRPFT +EDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRKSSS A  D  P
Sbjct: 61  HRPFTSDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHP 120

Query: 121 RQKRSP-------FNPGSPSASDSSDS-------------------------------TQ 180
            ++ +        FNP SPS SD SDS                               T 
Sbjct: 121 LKRSTSASAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKPFPPVPPLISHSNHPPMDTTS 180

Query: 181 PDPPTSLSLGLPGSD----PEPNQGPN---KKFFSAEFLGVMQEMIRKEVQNYMSGIEQN 216
            DPPTSL+L LPGSD    P+     N   K+FFSAEFLGVMQEMIRKEVQ+YMSG+EQN
Sbjct: 181 IDPPTSLTLSLPGSDSGDAPKHMSEANRIEKQFFSAEFLGVMQEMIRKEVQSYMSGMEQN 240

[Close]

BLAST of Sed0022871 vs. ExPASy TrEMBL
Match: A0A4D6V150 (MYB transcription factor 13 OS=Dimocarpus longan OX=128017 PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.3e-73
Identity = 168/305 (55.08%), Postives = 181/305 (59.34%), Query Frame = 0


Query: 4   ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPF 63
           ADRIKGPW+P+ED+ L+RLV + GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HRPF
Sbjct: 8   ADRIKGPWSPEEDEALQRLVQSFGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 67

Query: 64  TPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSSS-------DADFQ 123
           TPEEDDTII AHSRFGNKWA IAR LNGRTDNAIKNHWNSTLKRK SS       DA   
Sbjct: 68  TPEEDDTIIRAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMSDDINDDAQNP 127

Query: 124 PRQKRSP------------FNPGSPSASDSSDSTQP------------------------ 183
              KRS              NP SPS SD SDS+ P                        
Sbjct: 128 QPLKRSASVGPGNNVSGLYLNPSSPSGSDLSDSSLPGVSHSPAYRPLLRTGSHVPVETSS 187

Query: 184 ---DPPTSLSLGLPGSD--PEPNQGP---------------------------------- 216
              DP TSLSL LPGSD     NQGP                                  
Sbjct: 188 STSDPLTSLSLSLPGSDSCEASNQGPGSGSNTVYDPNLMVQPQSRTQTPTQVAAQPLAVQ 247

[Close]

BLAST of Sed0022871 vs. ExPASy TrEMBL
Match: A0A2P6Q0R0 (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0308731 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.3e-73
Identity = 164/297 (55.22%), Postives = 184/297 (61.95%), Query Frame = 0


Query: 2   ATADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHR 61
           A ADRIKGPW+P+ED+ L+RLV + GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HR
Sbjct: 10  AAADRIKGPWSPEEDEALQRLVQSYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHR 69

Query: 62  PFTPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRK-SSSDADFQPRQ- 121
           PFTPEEDDTII AH+RFGNKWA I+R LNGRTDNAIKNHWNSTLKRK SS   D  P Q 
Sbjct: 70  PFTPEEDDTIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKFSSFSDDMSPEQP 129

Query: 122 -KRSP------------FNPGSPSASDSSDSTQP----------------DPPTSLSLGL 181
            KRS              NPGSPS SD SDS+ P                DPPTSLSL L
Sbjct: 130 LKRSASVGAGTTVSGLYMNPGSPSGSDLSDSSLPGVIPPSQAVRPVAPVADPPTSLSLSL 189

Query: 182 PGSDPEPNQ--------------------------------------------------- 216
           PGS+  PN                                                    
Sbjct: 190 PGSNEGPNHQRSASGSGSSWVVSPKPKAQIVQLQPQVIQAQPEEAGGGEAARQGNHNSEA 249

[Close]

BLAST of Sed0022871 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-53
Identity = 128/304 (42.11%), Postives = 167/304 (54.93%), Query Frame = 0


Query: 4   ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPF 63
           ADRIKGPW+P+ED+ LRRLV   GPRNW++ISKSIPGRSGKSCRLRWCNQLSP+++HRPF
Sbjct: 2   ADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPF 61

Query: 64  TPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKS--------SSDADF 123
           + EED+TI  AH++FGNKWA IAR LNGRTDNA+KNHWNSTLKRK             D 
Sbjct: 62  SAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDH 121

Query: 124 QPRQKR----SP-------FNPGSPSASDSSD---------------------------- 183
           +P ++     SP        +PGSP+ SD SD                            
Sbjct: 122 RPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLPI 181

Query: 184 ---STQPDPPTSLSLGLPGSD--PEPNQ-------------------------------- 216
              S+  DPPTSLSL LPG+D   E N+                                
Sbjct: 182 ETSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRG 241

[Close]

BLAST of Sed0022871 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 123/271 (45.39%), Postives = 154/271 (56.83%), Query Frame = 0


Query: 4   ADRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPF 63
           ADR+KGPW+ +ED+ LRR+V   GPRNWS ISKSIPGRSGKSCRLRWCNQLSPE++HRPF
Sbjct: 2   ADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 61

Query: 64  TPEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSS------------S 123
           +PEED+TI+TA ++FGNKWA IAR LNGRTDNA+KNHWNSTLKRK S             
Sbjct: 62  SPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTTVTETEE 121

Query: 124 DADFQPRQKRSP--------------FNPGSPSASDSSDST------------------- 183
           D D +P+++RS                +P SP+  D SDS+                   
Sbjct: 122 DQD-RPKKRRSVSFDSAFAPVDTGLYMSPESPNGIDVSDSSTIPSPSSPVAQLFKPMPIS 181

Query: 184 -------QP----------DPPTSLSLGLPGSD---PEPNQGPNKKFF------------ 192
                  QP          DPPTSLSL LPG++      N   N   F            
Sbjct: 182 GGFTVVPQPLPVEMSSSSEDPPTSLSLSLPGAENTSSSHNNNNNALMFPRFESQMKINVE 241

[Close]

BLAST of Sed0022871 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 128/272 (47.06%), Postives = 155/272 (56.99%), Query Frame = 0


Query: 5   DRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFT 64
           +RIKGPW+P+ED LL+RLV   GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HR F+
Sbjct: 10  ERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFS 69

Query: 65  PEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSS---SDADF------ 124
            EED+TII AH+RFGNKWA I+R LNGRTDNAIKNHWNSTLKRK S      DF      
Sbjct: 70  QEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGGNGGY 129

Query: 125 -------QPRQKRSP----------FNPGSPSASDSSD--------------------ST 184
                  QP ++ +            +PGSPS SD S+                    S+
Sbjct: 130 DGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAHVFKPTVRSEVTASSS 189

Query: 185 QPDPPTSLSLGLPGSDP-----EP---NQG------------PNKK-------------- 195
             DPPT LSL LP +D      EP   NQ             P +K              
Sbjct: 190 GEDPPTYLSLSLPWTDETVRVNEPVQLNQNTVMDGGYTAELFPVRKEEQVEVEEEEAKGI 249

[Close]

BLAST of Sed0022871 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 195.7 bits (496), Expect = 3.9e-50
Identity = 89/106 (83.96%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 5   DRIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFT 64
           DRIKGPW+P+ED LL+ LV   GPRNWSLISKSIPGRSGKSCRLRWCNQLSPE++HR FT
Sbjct: 10  DRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFT 69

Query: 65  PEEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRKSS 111
            EEDDTII AH+RFGNKWA IAR LNGRTDNAIKNHWNSTLKRK S
Sbjct: 70  AEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCS 115

[Close]

BLAST of Sed0022871 vs. TAIR 10
Match: AT3G55730.1 (myb domain protein 109 )

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40
Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 6   RIKGPWTPDEDQLLRRLVHNLGPRNWSLISKSIPGRSGKSCRLRWCNQLSPELQHRPFTP 65
           ++KGPW+ +ED +L +LV  LGPRNWSLI++ IPGRSGKSCRLRWCNQL P L+ +PF+ 
Sbjct: 54  KVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSD 113

Query: 66  EEDDTIITAHSRFGNKWAAIARFLNGRTDNAIKNHWNSTLKRK 109
           EED  II+AH+  GNKWA IA+ L GRTDNAIKNHWNSTL+RK
Sbjct: 114 EEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRK 156

The following BLAST results are available for this feature:

BLAST of Sed0022871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452606.1	4.4e-80	64.04	PREDICTED: transcription factor MYB44-like [Cucumis melo] >KAA0064419.1 transcri...	[more]
XP_004141275.1	1.3e-79	65.02	transcription factor MYB44 [Cucumis sativus] >KGN55237.1 hypothetical protein Cs...	[more]
XP_038897438.1	3.8e-79	64.66	transcription factor MYB44-like [Benincasa hispida]	[more]
QCH41125.1	6.9e-73	55.08	MYB transcription factor 13 [Dimocarpus longan]	[more]
XP_024162701.1	9.0e-73	55.22	transcription factor MYB44 [Rosa chinensis] >PRQ27762.1 putative transcription f...	[more]

BLAST of Sed0022871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDW1	4.1e-52	42.11	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
O23160	1.5e-51	47.06	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q9SN12	1.5e-51	45.39	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
Q42575	4.8e-37	66.35	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
O04192	8.2e-37	64.08	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]

BLAST of Sed0022871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D9I8	2.1e-80	64.04	Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BTM6	2.1e-80	64.04	transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103493578 PE=4 SV=...	[more]
A0A0A0L3P9	6.3e-80	65.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641690 PE=4 SV=1	[more]
A0A4D6V150	3.3e-73	55.08	MYB transcription factor 13 OS=Dimocarpus longan OX=128017 PE=2 SV=1	[more]
A0A2P6Q0R0	4.3e-73	55.22	Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R...	[more]

BLAST of Sed0022871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67300.1	2.9e-53	42.11	myb domain protein r1	[more]
AT3G50060.1	1.1e-52	45.39	myb domain protein 77	[more]
AT4G37260.1	1.1e-52	47.06	myb domain protein 73	[more]
AT2G23290.1	3.9e-50	83.96	myb domain protein 70	[more]
AT3G55730.1	1.3e-40	68.93	myb domain protein 109	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 59..107 e-value: 1.3E-14 score: 64.6 coord: 7..56 e-value: 1.8E-16 score: 70.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 3..54 score: 11.811219
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 55..105 score: 9.337777
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 10..52 e-value: 2.4094E-16 score: 67.9858
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 62..105 e-value: 1.6634E-12 score: 57.9706
None	No IPR available	GENE3D	1.10.10.60		coord: 7..59 e-value: 1.0E-22 score: 81.8
None	No IPR available	GENE3D	1.10.10.60		coord: 61..125 e-value: 1.5E-21 score: 78.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..146
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 3..202
None	No IPR available	PANTHER	PTHR45614:SF124	TRANSCRIPTION FACTOR MYB73	coord: 3..202
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 8..53 e-value: 1.2E-17 score: 63.8 coord: 62..103 e-value: 1.7E-14 score: 53.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 3..58 score: 26.983232
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 59..109 score: 22.379192
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 5..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022871.1	Sed0022871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding