Sed0022853 (gene) Chayote v1

Overview


Name	Sed0022853
Type	gene
Organism	Sechium edule (Chayote v1)
Description	mini zinc finger
Location	LG08: 34911617 .. 34913143 (+)
RNA-Seq Expression	Sed0022853
Synteny	Sed0022853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATTTTTAGTAAGGCCCTATAAATAAAAGCTCTCTAGACTAGCTAGGGTTTGGGGTTAAAGAATATACAGGCATAATTCTCACTAAAAAAATTCTCTTAGATTTCTCCCCTCTCTCTCTCTCTCTTTATTTAGATTTTGATGAGTGAAGACATCAAAAACAAACCACCAAAACCAAAAACTCTCACAAACCAATTTCAACTCTTGATCTTACAAAGCCAGGGTTTTGGTTTTGGTTTTGTTTCAAATCAAATATAATCTCCCATCACCATGATGAAGAAAAGGCAAGTAGTTGTTAAAAGATCATCAGATGGATCATCATCATCATCAAATAGAAACAACACTTCATCTTCAACTGTGAGAAATGTTGTTAGATATGGAGAATGCCAAAAGAATCATGCTGCAAATATTGGTGGATATGCTGTTGATGGTTGCACTGAATTCTTAGCAAATGGAGAAGAAGGCTCTAATGAAGCTCTCACTTGTGCTGCTTGTGGCTGCCATAGAAACTTCCATAGAAGAGAAGTTGATACTCAAGAAGTGGTTTGTGAGTACTCTCCTCCTAATGCTTGAAATCTTTTCTAAATTATTTATAAATTATATAATAATACTACATCTAATTTCTTTTGTTTTATAATTGAGAAATTGGGGTCGTCCAATTGTAAACAGTCATCCACTATATATATATTCAAGCTTGAGATCTCCCAAAGAATATATCTTGAAGACTTAGACCTCTGCCAATAAGAGACAATACTATACCAAAACTTAATTACTACATCCCCAATTTTTATTATTAATTAACACCCTTTTGATACTTATATTTTGAATATTTATTGATGCCACAAACAATTGGCTGTGATTTGAACAATGAGAGATTCTGTAAGTAAATTGTGTATTGATTTGCTATCTTTTTCCTTTCTGTAAAGTCTCTTCTTTGAATAGGAATGACTATTTGTGATTGAAAAGAAAAGACCAAAAGGAAAAGTAAAACACTGCAGTTGAGTGGTGTATTATGTCAAGAAGAACTAATTTCTCTCCCTTATTTGATTCTGATTGTTGTTTTGGTAATGTATCAAATTTTGAAGCTTCCCTCCAGATGATATTTAGAGAGATTTGTAGAGATGGGGTAGATTCGATTTAGTTTTTTTTTATAACCGTGAATCGAAGTTTTACCCTACTATATACACTCGGGAGCACCCGCGCCCATCTCAAGGCGGGATGTTATCCTTCAAGTTTGATCTGATCATGTGATGTTTAATTAGTTAAAATTCATGGGGGCTTGCATTGATCAAACCATGACCTCATATAAAAGGAAGTTGCCTTATCTTTTAAGCAATCATTTGCGGAAAGAAATATTATATCTCTCCTATCAAAGGCCCACAAAAATCTAATCATGACACATCTTTGTAATACAATTGGAGTGAATTTTATTACTAGAAGCTGACCTAAATCTCAAAACCCCTATTTAGAATTTAGATCTCCCTGTAGCTGTGTGCTGTGGGTTAGTTTGTTGTTTATTACGTTGGGC

mRNA sequence

CTATTTTTAGTAAGGCCCTATAAATAAAAGCTCTCTAGACTAGCTAGGGTTTGGGGTTAAAGAATATACAGGCATAATTCTCACTAAAAAAATTCTCTTAGATTTCTCCCCTCTCTCTCTCTCTCTTTATTTAGATTTTGATGAGTGAAGACATCAAAAACAAACCACCAAAACCAAAAACTCTCACAAACCAATTTCAACTCTTGATCTTACAAAGCCAGGGTTTTGGTTTTGGTTTTGTTTCAAATCAAATATAATCTCCCATCACCATGATGAAGAAAAGGCAAGTAGTTGTTAAAAGATCATCAGATGGATCATCATCATCATCAAATAGAAACAACACTTCATCTTCAACTGTGAGAAATGTTGTTAGATATGGAGAATGCCAAAAGAATCATGCTGCAAATATTGGTGGATATGCTGTTGATGGTTGCACTGAATTCTTAGCAAATGGAGAAGAAGGCTCTAATGAAGCTCTCACTTGTGCTGCTTGTGGCTGCCATAGAAACTTCCATAGAAGAGAAGTTGATACTCAAGAAGTGGTTTGTGAGTACTCTCCTCCTAATGCTTGAAATCTTTTCTAAATTATTTATAAATTATATAATAATACTACATCTAATTTCTTTTGTTTTATAATTGAGAAATTGGGGTCGTCCAATTGTAAACAGTCATCCACTATATATATATTCAAGCTTGAGATCTCCCAAAGAATATATCTTGAAGACTTAGACCTCTGCCAATAAGAGACAATACTATACCAAAACTTAATTACTACATCCCCAATTTTTATTATTAATTAACACCCTTTTGATACTTATATTTTGAATATTTATTGATGCCACAAACAATTGGCTGTGATTTGAACAATGAGAGATTCTGTAAGTAAATTGTGTATTGATTTGCTATCTTTTTCCTTTCTGTAAAGTCTCTTCTTTGAATAGGAATGACTATTTGTGATTGAAAAGAAAAGACCAAAAGGAAAAGTAAAACACTGCAGTTGAGTGGTGTATTATGTCAAGAAGAACTAATTTCTCTCCCTTATTTGATTCTGATTGTTGTTTTGGTAATGTATCAAATTTTGAAGCTTCCCTCCAGATGATATTTAGAGAGATTTGTAGAGATGGGGTAGATTCGATTTAGTTTTTTTTTATAACCGTGAATCGAAGTTTTACCCTACTATATACACTCGGGAGCACCCGCGCCCATCTCAAGGCGGGATGTTATCCTTCAAGTTTGATCTGATCATGTGATGTTTAATTAGTTAAAATTCATGGGGGCTTGCATTGATCAAACCATGACCTCATATAAAAGGAAGTTGCCTTATCTTTTAAGCAATCATTTGCGGAAAGAAATATTATATCTCTCCTATCAAAGGCCCACAAAAATCTAATCATGACACATCTTTGTAATACAATTGGAGTGAATTTTATTACTAGAAGCTGACCTAAATCTCAAAACCCCTATTTAGAATTTAGATCTCCCTGTAGCTGTGTGCTGTGGGTTAGTTTGTTGTTTATTACGTTGGGC

Coding sequence (CDS)

ATGATGAAGAAAAGGCAAGTAGTTGTTAAAAGATCATCAGATGGATCATCATCATCATCAAATAGAAACAACACTTCATCTTCAACTGTGAGAAATGTTGTTAGATATGGAGAATGCCAAAAGAATCATGCTGCAAATATTGGTGGATATGCTGTTGATGGTTGCACTGAATTCTTAGCAAATGGAGAAGAAGGCTCTAATGAAGCTCTCACTTGTGCTGCTTGTGGCTGCCATAGAAACTTCCATAGAAGAGAAGTTGATACTCAAGAAGTGGTTTGTGAGTACTCTCCTCCTAATGCTTGA

Protein sequence

MMKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA

Homology

[Close]

BLAST of Sed0022853 vs. NCBI nr
Match: XP_022949221.1 (mini zinc finger protein 1 [Cucurbita moschata] >XP_022998151.1 mini zinc finger protein 1 [Cucurbita maxima] >XP_023525792.1 mini zinc finger protein 1 [Cucurbita pepo subsp. pepo] >KAG6607446.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037103.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-37
Identity = 83/100 (83.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLA 60
           MMKKRQV+VKR +DGSS+ ++ ++TSSS VR++VRYGECQKNHAANIGGYAVDGCTEFLA
Sbjct: 1   MMKKRQVIVKR-TDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLA 60

Query: 61  NGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA 101
           NGEEGSN ALTCAACGCHRNFHRREV+T EVVCEY PPNA
Sbjct: 61  NGEEGSNGALTCAACGCHRNFHRREVET-EVVCEYFPPNA 98

[Close]

BLAST of Sed0022853 vs. NCBI nr
Match: XP_008442199.1 (PREDICTED: mini zinc finger protein 1 [Cucumis melo] >TYJ98891.1 mini zinc finger protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 3.1e-36
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSS-------NRNNTSSSTVRNVVRYGECQKNHAANIGGYAVD 60
           MMKKRQVVVKRSS+G  SSS       NRN +SSS VR+VVRYGECQKNHAANIGGYAVD
Sbjct: 2   MMKKRQVVVKRSSEGGGSSSSSSANNNNRNISSSSRVRSVVRYGECQKNHAANIGGYAVD 61

Query: 61  GCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GC EFLA GEEGSN ALTCAACGCHRNFHRREV++ EVVCEYSPP
Sbjct: 62  GCREFLATGEEGSNGALTCAACGCHRNFHRREVES-EVVCEYSPP 105

[Close]

BLAST of Sed0022853 vs. NCBI nr
Match: KAA0036083.1 (mini zinc finger protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 3.1e-36
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSS-------NRNNTSSSTVRNVVRYGECQKNHAANIGGYAVD 60
           MMKKRQVVVKRSS+G  SSS       NRN +SSS VR+VVRYGECQKNHAANIGGYAVD
Sbjct: 2   MMKKRQVVVKRSSEGGGSSSSSSTNNNNRNISSSSRVRSVVRYGECQKNHAANIGGYAVD 61

Query: 61  GCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GC EFLA GEEGSN ALTCAACGCHRNFHRREV++ EVVCEYSPP
Sbjct: 62  GCREFLATGEEGSNGALTCAACGCHRNFHRREVES-EVVCEYSPP 105

[Close]

BLAST of Sed0022853 vs. NCBI nr
Match: XP_004137410.1 (mini zinc finger protein 1 [Cucumis sativus] >KGN64001.1 hypothetical protein Csa_013249 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35
Identity = 84/105 (80.00%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSS-------NRNNTSSSTVRNVVRYGECQKNHAANIGGYAVD 60
           MMKKRQVVVKRSS+G  SSS       NRN +SSS VR+VVRYGECQKNHAANIGGYAVD
Sbjct: 2   MMKKRQVVVKRSSEGGGSSSSSSANNNNRNISSSSRVRSVVRYGECQKNHAANIGGYAVD 61

Query: 61  GCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GC EFLA GEEGS+ ALTCAACGCHRNFHRREV++ EVVCEYSPP
Sbjct: 62  GCREFLATGEEGSHGALTCAACGCHRNFHRREVES-EVVCEYSPP 105

[Close]

BLAST of Sed0022853 vs. NCBI nr
Match: XP_007210942.1 (mini zinc finger protein 3 [Prunus persica] >XP_021820721.1 mini zinc finger protein 3-like [Prunus avium] >XP_034216920.1 mini zinc finger protein 3 [Prunus dulcis] >ONI08676.1 hypothetical protein PRUPE_5G193300 [Prunus persica])

HSP 1 Score: 151.8 bits (382), Expect = 3.2e-33
Identity = 79/98 (80.61%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 2   MKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLAN 61
           MKKRQVVVKR S G SSS     TSSS VR  VRYGECQKNHAAN+GGYAVDGC EF+A+
Sbjct: 1   MKKRQVVVKRDSSGRSSS-----TSSSMVR-TVRYGECQKNHAANLGGYAVDGCREFMAS 60

Query: 62  GEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPN 100
           GEEG+ EALTCAACGCHRNFHRREV+T EVVCEYSPPN
Sbjct: 61  GEEGTTEALTCAACGCHRNFHRREVET-EVVCEYSPPN 91

[Close]

BLAST of Sed0022853 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-31
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNV---VRYGECQKNHAANIGGYAVDGCTE 60
           MMKKRQ+V+K+ S  S++SS+   TSSS+  +    VRY ECQKNHAANIGGYAVDGC E
Sbjct: 1   MMKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCRE 60

Query: 61  FLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA 101
           F+A G EG+ +AL CAACGCHRNFHR+EVDT EVVCEYSPPNA
Sbjct: 61  FMAAGVEGTVDALRCAACGCHRNFHRKEVDT-EVVCEYSPPNA 102

[Close]

BLAST of Sed0022853 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.2e-28
Identity = 66/99 (66.67%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 2   MKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLAN 61
           MKKRQVV+K+     + +S+ +N         VRY ECQKNHAANIGGYAVDGC EF+A+
Sbjct: 1   MKKRQVVIKQRKSSYTMTSSSSN---------VRYVECQKNHAANIGGYAVDGCREFMAS 60

Query: 62  GEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA 101
              G ++ALTCAACGCHRNFHRREVDT EVVCEYSPPNA
Sbjct: 61  ---GGDDALTCAACGCHRNFHRREVDT-EVVCEYSPPNA 86

[Close]

BLAST of Sed0022853 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.2e-26
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 2  MKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLAN 61
          M+KRQVV++R+S    S S  ++T+SS     VRYGECQKNHAA +GGYAVDGC EF+A+
Sbjct: 1  MRKRQVVLRRASPEEPSRS--SSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMAS 60

Query: 62 -GEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GEEG+  ALTCAACGCHR+FHRRE++T EVVC+ + P
Sbjct: 61 RGEEGTVAALTCAACGCHRSFHRREIET-EVVCDCNSP 95

[Close]

BLAST of Sed0022853 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-20
Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 33 VVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVV 92
          VVRY ECQ+NHAA+IGG+AVDGC EF+A+G EG+  AL CAACGCHR+FHRREV+     
Sbjct: 32 VVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAAAE 91

Query: 93 CEYS 97
          C+ S
Sbjct: 92 CDCS 95

[Close]

BLAST of Sed0022853 vs. ExPASy Swiss-Prot
Match: Q2RB28 (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-20
Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 33 VVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVV 92
          VVRY ECQ+NHAA+IGG+AVDGC EF+A+G EG+  AL CAACGCHR+FHRREV+     
Sbjct: 32 VVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAAAE 91

Query: 93 CEYS 97
          C+ S
Sbjct: 92 CDCS 95

[Close]

BLAST of Sed0022853 vs. ExPASy TrEMBL
Match: A0A6J1K9G7 (mini zinc finger protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492884 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 8.0e-38
Identity = 83/100 (83.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLA 60
           MMKKRQV+VKR +DGSS+ ++ ++TSSS VR++VRYGECQKNHAANIGGYAVDGCTEFLA
Sbjct: 1   MMKKRQVIVKR-TDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLA 60

Query: 61  NGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA 101
           NGEEGSN ALTCAACGCHRNFHRREV+T EVVCEY PPNA
Sbjct: 61  NGEEGSNGALTCAACGCHRNFHRREVET-EVVCEYFPPNA 98

[Close]

BLAST of Sed0022853 vs. ExPASy TrEMBL
Match: A0A6J1GBE8 (mini zinc finger protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111452637 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 8.0e-38
Identity = 83/100 (83.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLA 60
           MMKKRQV+VKR +DGSS+ ++ ++TSSS VR++VRYGECQKNHAANIGGYAVDGCTEFLA
Sbjct: 1   MMKKRQVIVKR-TDGSSNRNSSSSTSSSAVRSLVRYGECQKNHAANIGGYAVDGCTEFLA 60

Query: 61  NGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA 101
           NGEEGSN ALTCAACGCHRNFHRREV+T EVVCEY PPNA
Sbjct: 61  NGEEGSNGALTCAACGCHRNFHRREVET-EVVCEYFPPNA 98

[Close]

BLAST of Sed0022853 vs. ExPASy TrEMBL
Match: A0A5D3BJJ4 (Mini zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00880 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSS-------NRNNTSSSTVRNVVRYGECQKNHAANIGGYAVD 60
           MMKKRQVVVKRSS+G  SSS       NRN +SSS VR+VVRYGECQKNHAANIGGYAVD
Sbjct: 2   MMKKRQVVVKRSSEGGGSSSSSSANNNNRNISSSSRVRSVVRYGECQKNHAANIGGYAVD 61

Query: 61  GCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GC EFLA GEEGSN ALTCAACGCHRNFHRREV++ EVVCEYSPP
Sbjct: 62  GCREFLATGEEGSNGALTCAACGCHRNFHRREVES-EVVCEYSPP 105

[Close]

BLAST of Sed0022853 vs. ExPASy TrEMBL
Match: A0A5A7SZK7 (Mini zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00780 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSS-------NRNNTSSSTVRNVVRYGECQKNHAANIGGYAVD 60
           MMKKRQVVVKRSS+G  SSS       NRN +SSS VR+VVRYGECQKNHAANIGGYAVD
Sbjct: 2   MMKKRQVVVKRSSEGGGSSSSSSTNNNNRNISSSSRVRSVVRYGECQKNHAANIGGYAVD 61

Query: 61  GCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GC EFLA GEEGSN ALTCAACGCHRNFHRREV++ EVVCEYSPP
Sbjct: 62  GCREFLATGEEGSNGALTCAACGCHRNFHRREVES-EVVCEYSPP 105

[Close]

BLAST of Sed0022853 vs. ExPASy TrEMBL
Match: A0A1S3B557 (mini zinc finger protein 1 OS=Cucumis melo OX=3656 GN=LOC103486103 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSS-------NRNNTSSSTVRNVVRYGECQKNHAANIGGYAVD 60
           MMKKRQVVVKRSS+G  SSS       NRN +SSS VR+VVRYGECQKNHAANIGGYAVD
Sbjct: 2   MMKKRQVVVKRSSEGGGSSSSSSANNNNRNISSSSRVRSVVRYGECQKNHAANIGGYAVD 61

Query: 61  GCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GC EFLA GEEGSN ALTCAACGCHRNFHRREV++ EVVCEYSPP
Sbjct: 62  GCREFLATGEEGSNGALTCAACGCHRNFHRREVES-EVVCEYSPP 105

[Close]

BLAST of Sed0022853 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 )

HSP 1 Score: 137.1 bits (344), Expect = 7.7e-33
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   MMKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNV---VRYGECQKNHAANIGGYAVDGCTE 60
           MMKKRQ+V+K+ S  S++SS+   TSSS+  +    VRY ECQKNHAANIGGYAVDGC E
Sbjct: 1   MMKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCRE 60

Query: 61  FLANGEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA 101
           F+A G EG+ +AL CAACGCHRNFHR+EVDT EVVCEYSPPNA
Sbjct: 61  FMAAGVEGTVDALRCAACGCHRNFHRKEVDT-EVVCEYSPPNA 102

[Close]

BLAST of Sed0022853 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger )

HSP 1 Score: 125.6 bits (314), Expect = 2.3e-29
Identity = 66/99 (66.67%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 2   MKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLAN 61
           MKKRQVV+K+     + +S+ +N         VRY ECQKNHAANIGGYAVDGC EF+A+
Sbjct: 1   MKKRQVVIKQRKSSYTMTSSSSN---------VRYVECQKNHAANIGGYAVDGCREFMAS 60

Query: 62  GEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPPNA 101
              G ++ALTCAACGCHRNFHRREVDT EVVCEYSPPNA
Sbjct: 61  ---GGDDALTCAACGCHRNFHRREVDT-EVVCEYSPPNA 86

[Close]

BLAST of Sed0022853 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 )

HSP 1 Score: 118.2 bits (295), Expect = 3.7e-27
Identity = 62/98 (63.27%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 2  MKKRQVVVKRSSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLAN 61
          M+KRQVV++R+S    S S  ++T+SS     VRYGECQKNHAA +GGYAVDGC EF+A+
Sbjct: 1  MRKRQVVLRRASPEEPSRS--SSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMAS 60

Query: 62 -GEEGSNEALTCAACGCHRNFHRREVDTQEVVCEYSPP 99
           GEEG+  ALTCAACGCHR+FHRRE++T EVVC+ + P
Sbjct: 61 RGEEGTVAALTCAACGCHRSFHRREIET-EVVCDCNSP 95

[Close]

BLAST of Sed0022853 vs. TAIR 10
Match: AT2G02540.1 (homeobox protein 21 )

HSP 1 Score: 91.7 bits (226), Expect = 3.7e-19
Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 33  VVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNEALTCAACGCHRNFHRREVDTQE 91
           V++Y EC KNHAA +GG A+DGC EF+ +GEEGS EALTC+ C CHRNFHRRE + +E
Sbjct: 84  VIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEE 141

[Close]

BLAST of Sed0022853 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 91.7 bits (226), Expect = 3.7e-19
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 12  SSDGSSSSSNRNNTSSSTVRNVVRYGECQKNHAANIGGYAVDGCTEFLANGEEGSNEALT 71
           S +G++SS       S  V   +RY EC KNHA NIGG+AVDGC EF+ +GE+G+ +AL 
Sbjct: 25  SGEGATSSGGGGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALK 84

Query: 72  CAACGCHRNFHRREVDT 89
           CAACGCHRNFHR+E ++
Sbjct: 85  CAACGCHRNFHRKETES 101

The following BLAST results are available for this feature:

BLAST of Sed0022853 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949221.1	1.7e-37	83.00	mini zinc finger protein 1 [Cucurbita moschata] >XP_022998151.1 mini zinc finger...	[more]
XP_008442199.1	3.1e-36	80.95	PREDICTED: mini zinc finger protein 1 [Cucumis melo] >TYJ98891.1 mini zinc finge...	[more]
KAA0036083.1	3.1e-36	80.95	mini zinc finger protein 1 [Cucumis melo var. makuwa]	[more]
XP_004137410.1	1.2e-35	80.00	mini zinc finger protein 1 [Cucumis sativus] >KGN64001.1 hypothetical protein Cs...	[more]
XP_007210942.1	3.2e-33	80.61	mini zinc finger protein 3 [Prunus persica] >XP_021820721.1 mini zinc finger pro...	[more]

BLAST of Sed0022853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA51	1.1e-31	69.90	Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1	[more]
Q2Q493	3.2e-28	66.67	Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1	[more]
Q9LJW5	5.2e-26	63.27	Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1	[more]
B8BIU8	2.5e-20	67.19	Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 S...	[more]
Q2RB28	2.5e-20	67.19	Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3...	[more]

BLAST of Sed0022853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9G7	8.0e-38	83.00	mini zinc finger protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492884 PE=4 SV=1	[more]
A0A6J1GBE8	8.0e-38	83.00	mini zinc finger protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111452637 PE=4 SV...	[more]
A0A5D3BJJ4	1.5e-36	80.95	Mini zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7SZK7	1.5e-36	80.95	Mini zinc finger protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3B557	1.5e-36	80.95	mini zinc finger protein 1 OS=Cucumis melo OX=3656 GN=LOC103486103 PE=4 SV=1	[more]

BLAST of Sed0022853 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74660.1	7.7e-33	69.90	mini zinc finger 1	[more]
AT1G18835.1	2.3e-29	66.67	mini zinc finger	[more]
AT3G28917.1	3.7e-27	63.27	mini zinc finger 2	[more]
AT2G02540.1	3.7e-19	65.52	homeobox protein 21	[more]
AT4G24660.1	3.7e-19	55.84	homeobox protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 34..86 e-value: 4.2E-30 score: 103.9
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 35..86 e-value: 9.0E-27 score: 91.3
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 36..85 score: 26.153055
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..31
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 2..100
None	No IPR available	PANTHER	PTHR31948:SF65	MINI ZINC FINGER PROTEIN 1	coord: 2..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022853.1	Sed0022853.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding