Sed0022849 (gene) Chayote v1

Overview


Name	Sed0022849
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ras-related protein Rab-2A
Location	LG11: 27599868 .. 27604490 (-)
RNA-Seq Expression	Sed0022849
Synteny	Sed0022849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTAATAATAAAATGGTGTATAAAGTTTGAATATTTATTATCGTAATTGCCAGCTCAAAGTCATAGATCGTAATTCTAATTCACAACCAACCAGCGGTGGCGTTTCTTTGCCTCGCCTCGTTGGAGCTCGGCAATTGAAACCCCCAATTCCCCTTTAATCCTTGCGCCGATCCGGATCAGGGTTTTGCTCTTCGATTCCAATCGCAATGTCATACGCTTATCTTTTCAAGTACATCATCATTGGCGATACTGGTAACCTCTCAAAACCTATTTTGGATCTGATTCCTGAATTGGGTCGCTTTGATTTTGGGTTGATTTGTGCTTAATCTGTGTTTTTCATCTGTTCTGTGGGGTTTTCGTTTTCAATTTGAGGATTGTTGTGTTGGGGTTTCGTTTTGTGTTTGTTGATTGATGGGTTTTTGATACTGAATTGTGGGTGTTCTTTAGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTCCAGCCTGTTCATGATTTGACGATTGGTGTTGAGTTTGGTGCTAGGATGATCACCATCGATAGCAAACCTATCAAGTTGCAAATTTGGGATACGGTTTGCTATCTCTCTTTCTCTCTCTCTATCTTTTTTTTTTGTTTAGTTTTGTATTTTGGAATTTTTGGTTCGAAACTCCAGATATTTAACTGCGACACTACTCTGTTGAATTGAATGCGTTCTGTTCTGGTTTATGAATTTGTTCTTTACCTTACCTTGGCCCTTTTTTTTTTAATATCCGTGACTATCTAGGCCAGCTTGCACGCACCTCCACTATTGTTACGGGGCATACTGCCTAACCCTACAACATTTGGATGCCAAGGAAACCTGTAGAAAATTAATTCCTAGGTAGGTGGCCACCATGGGGGTTGAACCCATTACCTTATGTACTCCAAGACCCCCTTTGACCAATTGAGCCACCCCATGATAGTTACCTTACCTTGGCCCATTTAAAGATAAATTGTCTGCAATTATACTAGAGTGGAGTCGGTGATTAGTGATATGTTGTTATAAGTTTGAATCTTAGTCGTCCCCAAAGGTTTGTCTTGTTGGTAGAGGCTTTGGTTTCTAAGGAACACTCTGAGGTTTGAAAGTCATGAGTGACTTTAATTGTAAAAGCTTTTGTTGTCTCCTAATTTTGGAGTTTAGACGAGTGCTAGTGCTCTCAAGTATGTAGGGGCAAAGCTTAGATCCCCGGTTATCCAAAAAAAAAAAGTTCAGATAAAAGGTGTAAACAATAACTTATAGAACCAGGAAACCTTCATTCATGCTATTGTATAGATTCCATTCACTACTATCTATGCGACTTATATTGATGTTTTGAGATATAGATTATCTTGTAACCTGGCTTTGAATCTAAAAACTTTATCCATAATTTATGCAAAACTTGTATAGGCTCTTAGGGTAAGTGCTCTGCTTAAACTTAAAGCACACGTATATATTACACAACATACTTATTCTTCAGATTAATGGCCATTCTTCAAACTATCTGCTTTGTGAGTAATGATGATTATTGTTGAATCAACGTCTTATATTGCTCATTTTCATTGCACATATATCACATGATTATTTCTATTCCATCAAGTTTTTTTTCCAATTTTGATGTTTCCCAAAAATGTAACAGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGGGGAGCTGCTGGTGCATTGCTTGTGTACGATATCACCAGGTCTTTTTACCTCTTTGTCCCCTCGTGAATTAATACTACTTATGGGTTTTGTTGTAGGGAAATTTTTGTACTTCAATACTTTGGGTTGTTGCCTTATGTAGTCGTTGGCTTGTTTGTGACTGTTAGTATGTTTACCAAGCTGGTCGAGGTGGTTAAGTATTAACCATTGTTGTTCATGAAAGTAAAACGAGTTAGCCAGAAAGGTCATTAGTTTGGTGGAACTGACCAATGTGCTAGCCTGATGCTGTTCGCAGTAGAATTTTGGGTGGACAGCAATAAAGTTTAAATATGAATGCATGACTTGTCTCTTGGGTGGCGCAGTGGTTGAAGGCTTGAGCTTTGATGATATACTCCCTTCAAGGTCTCAAGTTTGAGACTCACATGTGACATTAATGTCTCCATTCCTTTGATGTCTCCTGGTACCTGGCCTAGGGACGGGTGTGGATACCTTTGGGTATAGTGGAGCGAAACCTTCCCTGGTTTCCAAAAAAAAAAAAGAATACATGACTTTTCATGGTATTAGTTGTGGTTAGTTTTTGTCCTGAATAGTTGTAGGTTTGTGCAAATAACTTTAGCAAGACCGATGTTGTTAAAATAAGCGTTCACTCAGGTTTGACAACAGTGCGTCATGTTTCATCAGTCTGAAGTTTGCTGTGATTCCATCTTCTGATGGACTGCATAATCTGAAATGGAGCTTCATACTTAAAATTTCCCGAATCAATGGGGATATCGAGATAAACTTAAAGTTGTGTCTTGTGTGGCTATCATATTTTTCAGGAGGGAGACTTTTAATCACCTAGCTAGTTGGCTTGAAGATGCAAGGCAGCATGCTAATGCAAACATGTCAATAATGCTTATCGGCAACAAGTGCGATCTTGCGCACAGAAGGGCCGTCAGCACAGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGATAGAATAAAAATAGTCATAAATTGCCTTTCACAAAGTTGGACACTGATCATCTCTAAACTAAGAACATGATATGAAGATTTACTCATAATATCAATAATTGGACACTGATCATCTCTAAACTGATCATCTATCTGATACATTTTTTCTGTCTCACAAGTTTTCCTAATGATCAATAATTTTTAACAGGCATTCATCAAAACTGCTGGGACCATATATAAGAAGATCCAGGATGGAGTGTTTGATGTATCTAATGAGGTATGCAGTATGCTTAATGTTGGTTGATGTAGTTAAATTTACCCCAACCCACCAGCTTAAGTTTTTGAGTTGATTGGTGATTTAATATAATTCAACATAGTATCAAAGGAGAAGGTCTTGAGTTCGTGCCCCTACAAAGCCCTTTCCTCTCCAATTAAAATTGAATTCCACCCGTAGGGCATTTCTAAAATTTCTAAGTCTACAAGTAGAGTGTTGGTTGATATAACTAAATTTACCCCAACTTATAAACTTAAGCTTTTGGGTTGATTGGTGGTTTAAAACTTTAAAATAATTCAACACTTTAACTGTTGCTAACTGTTTGGTTTTACTTTCGACTGAGCTACCTGTGGTGGCTTCACCCTTCGTCCAAATTATTTAGGCTCCTTCTCATGATGGTTTCAAATTTTTAGTTTTATGTTTTTAAATGTCTAATGTCTCATATTTTCTTTACTAAAAAAGTTTTCTTTTGTATTTTTTGGAGTTTTCTAAACTTCGTTGAATTTTGAAAATATTGTTATGGGTGGATAACAAAATAAAGGAATTTATAGATGGAAGTAGTTTTTATAAGCAAAGTTTTAAAAAACCAAACGGTCATCGATCGATTCATTAATGGTTTAAGTTGGTATGGTGTTTGTCCAATGACTTTTTAGCAATGCCACTAATGGCATAAATGACAGAATTTAGATTCTTGTATTTGGTTTTTGTTTCAACCATGGAAGAATATGGATGAGGATGATGGGATAAAAGTTCATGCATGTAATGTCGAAGGCTTGGGCTTTTAAGGTGTGCTCCCCTTAAGGTCTCAAGTTCGAGACTAGTGACATTAATGTGTAGACAACTCCCATATCCCCCTTCCTTCAATGTCTCCCATTGCCTGGCCTAGGGACGGACATGGTTACCTCTGATATAGTGGAGCGAAGCTCCAATTTTTCTGGTTTCAAAAAAAAAAAAAGTTTATGCATGTGATGTACCTGTCAAATATACAAGTGTTTAGGTTATGTTTTTTTTCTTTTGTGCACTTCAACTAATCTTACGGGACAAACATATAACCTATTACATTCGTAGTTTATGTTATGTTGCTCCATCTTATGTGCAGTCATATGGGATAAAAGTTGGGTATGGTGGAATCCCAGGGCCATCTGGAGGCAGAGATGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAAACTTGCTGCTCAATCAGTACAAACTTTAAAGTTCTCTTTAAATTTCTTTGTTAATCATGAGTGTCAGAAATTCCCCCTCCCCAGAAAAAGAACAAAAAAAGAAAAAAGAACCCCATAATAGGTTCAGATATTTGTATAATTATCTGTGTTATGTTTTTTCTTTTTCTTTTTAAAATAAGCTCATTGTGTATTGATCGTATTTGATTGTAAAGGTAAATTCATATCAATGGATGTTACTTGTGACAAAACTGCATCCTGACTTTTTTATTTGAAAAATACTTGCCTTCTAAGGAGGTAAGTCTTCTTTAAGAGTGATGTGACATTATTTGGTACCATAAAACTTTTACTCTTTTAAAATATATCGTTAGAAACAAAAGTTTTACGACATCAAATTGTGTCACATCACTTTTAAGGAGAGCAACTTCTTATTCATAAAGAGGCAAGTATTGCTCATTC

mRNA sequence

AAAACTAATAATAAAATGGTGTATAAAGTTTGAATATTTATTATCGTAATTGCCAGCTCAAAGTCATAGATCGTAATTCTAATTCACAACCAACCAGCGGTGGCGTTTCTTTGCCTCGCCTCGTTGGAGCTCGGCAATTGAAACCCCCAATTCCCCTTTAATCCTTGCGCCGATCCGGATCAGGGTTTTGCTCTTCGATTCCAATCGCAATGTCATACGCTTATCTTTTCAAGTACATCATCATTGGCGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTCCAGCCTGTTCATGATTTGACGATTGGTGTTGAGTTTGGTGCTAGGATGATCACCATCGATAGCAAACCTATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGGGGAGCTGCTGGTGCATTGCTTGTGTACGATATCACCAGGAGGGAGACTTTTAATCACCTAGCTAGTTGGCTTGAAGATGCAAGGCAGCATGCTAATGCAAACATGTCAATAATGCTTATCGGCAACAAGTGCGATCTTGCGCACAGAAGGGCCGTCAGCACAGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATCAAAACTGCTGGGACCATATATAAGAAGATCCAGGATGGAGTGTTTGATGTATCTAATGAGTCATATGGGATAAAAGTTGGGTATGGTGGAATCCCAGGGCCATCTGGAGGCAGAGATGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAAACTTGCTGCTCAATCAGTACAAACTTTAAAGTTCTCTTTAAATTTCTTTGTTAATCATGAGTGTCAGAAATTCCCCCTCCCCAGAAAAAGAACAAAAAAAGAAAAAAGAACCCCATAATAGGTTCAGATATTTGTATAATTATCTGTGTTATGTTTTTTCTTTTTCTTTTTAAAATAAGCTCATTGTGTATTGATCGTATTTGATTGTAAAGGTAAATTCATATCAATGGATGTTACTTGTGACAAAACTGCATCCTGACTTTTTTATTTGAAAAATACTTGCCTTCTAAGGAGGTAAGTCTTCTTTAAGAGTGATGTGACATTATTTGGTACCATAAAACTTTTACTCTTTTAAAATATATCGTTAGAAACAAAAGTTTTACGACATCAAATTGTGTCACATCACTTTTAAGGAGAGCAACTTCTTATTCATAAAGAGGCAAGTATTGCTCATTC

Coding sequence (CDS)

ATGTCATACGCTTATCTTTTCAAGTACATCATCATTGGCGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAGTTTACTGATAAGAGATTCCAGCCTGTTCATGATTTGACGATTGGTGTTGAGTTTGGTGCTAGGATGATCACCATCGATAGCAAACCTATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGGGGAGCTGCTGGTGCATTGCTTGTGTACGATATCACCAGGAGGGAGACTTTTAATCACCTAGCTAGTTGGCTTGAAGATGCAAGGCAGCATGCTAATGCAAACATGTCAATAATGCTTATCGGCAACAAGTGCGATCTTGCGCACAGAAGGGCCGTCAGCACAGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATTTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATCAAAACTGCTGGGACCATATATAAGAAGATCCAGGATGGAGTGTTTGATGTATCTAATGAGTCATATGGGATAAAAGTTGGGTATGGTGGAATCCCAGGGCCATCTGGAGGCAGAGATGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAA

Protein sequence

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS

Homology

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BLAST of Sed0022849 vs. NCBI nr
Match: XP_038893942.1 (ras-related protein RABB1c isoform X2 [Benincasa hispida])

HSP 1 Score: 422.2 bits (1084), Expect = 2.7e-114
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 211

[Close]

BLAST of Sed0022849 vs. NCBI nr
Match: KAG7019338.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420.6 bits (1080), Expect = 7.9e-114
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 210

[Close]

BLAST of Sed0022849 vs. NCBI nr
Match: XP_022927533.1 (ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.6 bits (1080), Expect = 7.9e-114
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TA TIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 250

[Close]

BLAST of Sed0022849 vs. NCBI nr
Match: XP_022142692.1 (ras-related protein RABB1c [Momordica charantia])

HSP 1 Score: 420.6 bits (1080), Expect = 7.9e-114
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTSAQAGGCCS 211

[Close]

BLAST of Sed0022849 vs. NCBI nr
Match: XP_031397460.1 (ras-related protein RABB1c [Punica granatum] >OWM85666.1 hypothetical protein CDL15_Pgr029089 [Punica granatum])

HSP 1 Score: 420.2 bits (1079), Expect = 1.0e-113
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG T+QSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATSQSGGCCS 211

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BLAST of Sed0022849 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-115
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Sed0022849 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-108
Identity = 194/211 (91.94%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTAG IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGY  IPG SGG   +++Q GGCCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]

BLAST of Sed0022849 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-107
Identity = 194/211 (91.94%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTAG IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGY  +PG SGG  G+++Q GGCCS
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCCS 209

[Close]

BLAST of Sed0022849 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.2e-103
Identity = 182/210 (86.67%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMSIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TA  I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ES GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Sed0022849 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.5e-99
Identity = 183/213 (85.92%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYG-GIPGPSGGR--DGTTAQSGGCC 211
           ESYGIKVGYG G  GP   +  +G   +S  CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]

BLAST of Sed0022849 vs. ExPASy TrEMBL
Match: A0A6J1CNK8 (ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.8e-114
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTSAQAGGCCS 211

[Close]

BLAST of Sed0022849 vs. ExPASy TrEMBL
Match: A0A6J1EL97 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.8e-114
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TA TIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 221 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 250

[Close]

BLAST of Sed0022849 vs. ExPASy TrEMBL
Match: A0A218XLU8 (ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.0e-114
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG T+QSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATSQSGGCCS 211

[Close]

BLAST of Sed0022849 vs. ExPASy TrEMBL
Match: A0A0A0LYF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.0e-114
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Sed0022849 vs. ExPASy TrEMBL
Match: A0A1S3CLK8 (ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.0e-114
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 212
           ESYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Sed0022849 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-116
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA TIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ESYGIKVGYGGIPGPSGGRDG+T+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Sed0022849 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-104
Identity = 182/210 (86.67%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMSIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TA  I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           ES GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Sed0022849 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 330.1 bits (845), Expect = 1.3e-90
Identity = 165/211 (78.20%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITID+KPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NM+ MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
           CDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TA TIYK+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESYGIKVGYGGIPGPSGGRDGTTAQS-GGCC 211
           E        G  PGP GG+D +++Q   GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204

[Close]

BLAST of Sed0022849 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 283.1 bits (723), Expect = 1.8e-76
Identity = 137/164 (83.54%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 47  MITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANANMSIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGT 166
           HAN NMSIMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TA  
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGCC 211
           I + IQDGVFDVSNES GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164

[Close]

BLAST of Sed0022849 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 194.9 bits (494), Expect = 6.5e-50
Identity = 103/210 (49.05%), Postives = 131/210 (62.38%), Query Frame = 0


Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K IK Q+WDT
Sbjct: 10  YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNKCD 122
           AGQE +R+IT +YYRGA GALLVYDITR  TF ++  WL++ R H +AN+ IML+GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD 129

Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNES 182
           L H RAV TEE   F++   + FME SA  A NVE+AF      IY+ +     D + + 
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDP 189

Query: 183 YGIKVGYGGIPGPSGGRDGTTA-QSGGCCS 212
             +  G        G +D  TA +S GCCS
Sbjct: 190 MSLPKGQ---TIDIGNKDDVTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of Sed0022849 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893942.1	2.7e-114	98.58	ras-related protein RABB1c isoform X2 [Benincasa hispida]	[more]
KAG7019338.1	7.9e-114	98.57	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927533.1	7.9e-114	98.57	ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related p...	[more]
XP_022142692.1	7.9e-114	98.10	ras-related protein RABB1c [Momordica charantia]	[more]
XP_031397460.1	1.0e-113	98.10	ras-related protein RABB1c [Punica granatum] >OWM85666.1 hypothetical protein CD...	[more]

BLAST of Sed0022849 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	1.5e-115	97.14	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	1.8e-108	91.94	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	1.9e-107	91.94	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	2.2e-103	86.67	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P36863	1.5e-99	85.92	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]

BLAST of Sed0022849 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNK8	3.8e-114	98.10	ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 S...	[more]
A0A6J1EL97	3.8e-114	98.57	ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE...	[more]
A0A218XLU8	5.0e-114	98.10	ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1	[more]
A0A0A0LYF8	5.0e-114	98.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1	[more]
A0A1S3CLK8	5.0e-114	98.10	ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1	[more]

BLAST of Sed0022849 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	1.1e-116	97.14	RAB GTPase homolog B1C	[more]
AT4G35860.1	1.6e-104	86.67	GTP-binding 2	[more]
AT4G17160.1	1.3e-90	78.20	RAB GTPase homolog B1A	[more]
AT4G35860.2	1.8e-76	83.54	GTP-binding 2	[more]
AT4G18430.1	6.5e-50	49.05	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 48..70 score: 53.4 coord: 145..167 score: 43.74 coord: 7..28 score: 51.86 coord: 110..123 score: 49.72 coord: 30..46 score: 32.76
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 1.1E-37 score: 141.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..211 e-value: 4.2E-5 score: 23.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 1.4E-105 score: 366.7
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..211
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..210 score: 35.835354
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.672117
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 1.04878E-130 score: 362.896
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 1.1E-11 score: 30.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 1.6E-62 score: 209.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..211 score: 19.292048
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..182 e-value: 4.2E-71 score: 240.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..179
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 6.6E-33 score: 111.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022849.1	Sed0022849.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding