Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAACTCGGTTCCTCGACATCGATTACTTCGCCGCCGGAAATGAACCTTTCCGGTGCCTCCCTGTCCCTCACCTCGCTTCGAAGCCGCCACTATCCACCGCCGGCGATCTCCTCCACTTCGATTTTCTCCCTGAAATCTCTCTCGCAATCGACAGATTAGCGATCGATTCTGCTCTCTCCAAGTTCTTCGACGACGTTCTCCCGCGCAGAATCGACGATGATAATGATTATCGCGATTCTAGGTTTCAAGGTTCCACGGAGAGGATTCGATTCCTGGAGGTAAAACATTTTGCTCAATCAATGCAGTTTTCGATTTCGGTTAATGCGTCTTGTTAATGTTCATTACTGTTTGCGGCTGTGAGAAATTTTTGTCATGAGAGATTGTGCGAAGTTTTTGTTTAATAGCGTGGTAAGCTTGATTGAATCGAGGAGCGCTTTTGAATTCTGGCGATTCTCAAGGTTATTTGAGATAATGTGATTTAGAGGTCATTATTCGTCTCTGGATCAATTTCATTATTATTTTGTTGTCAAGCCAGGGCTGTGATCTCGAATTGAAGAGTTTACGTCATTTTGAGGCAAAATGTTGTCATCTGAAAGGATTGTTTAGAACTTGAAATAATTTCTGATGGATGCTTTTGTTGCATGTTTCCTCTAATGAAAGAATAACGATTATGATTTTTAACTCTTCTTGTTGAACTTTTAGAATTTTTTTTAGGTTTCCTCTTTCCTTTATCTGATTCATTTTTATGGACTGCAGGAAGAAGCTAAGTGTGCTTACGAAGATAATGTGGAGGGGGGATGGAAGAATTTTGGATCTGAAACATCAGAAACTGAATTCGTAAAAGTGCAATTCTGGCTTTCTTGAGCTAAATTACTTTGTTGCATTATTATGGTATAATGAGGTTTTAAATGTATACAATATGTTATGGCAGAAGGCTATTGGGACTGTTATAAGGAATAGAAACCTCACATATGATATGATCCAATTTGAAACACCTCAGCTTGATGCGTTCTTGGTACGGCGTACGCTTATTGAAAGTGAAGATTTAATGTTTGTTCTATTTGACTGATCCTTAGTTAAGTTGTGTTTATTATTTTTCTTATTTCTGCAGGAAAATGCCTTCTTGTTTGAAAGGGAGGAGGTACAAATTCTTGCAGAATTTCCAGAGGCTAAATTTAATCTTGTAAGTGGGTTATCCTTGTAAATAATTTTCTTTATTGATGTGATAAGCTAGACATATTTTTCATCTTAGTATTCTTAGACAATACAGATATATTAAGACTTTCAACATTCACATCTTAGGATTCTGATGGACTGGACTAAGCAATGATGTAATCTGGTTTAGAAGATATTATTTTAGAACGAGGAAAATGATAAAGTTATTATAATTGATAGACTATGGAATAAGCAGTTACAGAATCTAGTTTAGAAGGCATTTTTTTAAACAAGGAAGGTGATAAAGTTATTATAATTAGACAGCTATTCTGCAAGATTTTGCGCCTTGTCTTAAGTGAGGAATTTGCTTATAACTTCTACTTTTTGGGGGGTTTGTAAGTGGTTTCTGTTAATAGTTAAACATGACGATAATCTGGAGATCTCTTGCAGGAGACTCTTAATCAAGGGCTTCTTAACTGCCCTTCCGAAGTCAAAGAATCAGTTTATGCAATTGAAGGCATTACCTCAGAATATCTCTTGGACCAAAAATCTTGCTTGGTTGAAGAAGATTTTGCTCAGGACCAGAAGCTATTGCATCGATTGACTTTTCCCTTTTTAGAAGTAGATGAGATGGTTCTTGAAACTTCGGCATTCTTTTCCATGCAGGATGAACTTTGTTTTGTTCTTGACAATAGTGAATCACCTCACAGTATACAAGATGATAATTTACTAGTCAATGATGAAGAAAATTTGTGCTCCATGAAGAGTGACATCGAAGAATTTCTTTTAGATCATTTTTTGAGGCCATGTGCTGTTTCTGAGGTTGCATCCCCTGACATTTCTGGAGGATCAGACTTAATGAGCTTGATGGAAATTTTGGAGATTCCAGTAAGCTCTGCAGTTCAAACAAAACCAAGCTGCGATTTACCTGTAGGACTAGCTATTTTTGAAGAATTCCAGCTGCTGGACATATACTCGAATCAACCTTTTGAAGCCTTCTTTGATTTGGAATTATCAGCCGTGTCAGAAATAAGTGACTGTATGTCCATAGAAAACATGAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTTGTAGATGACACGTTCAAGTCATTACCTGTACCTCTCTTATCTAGTGAGGAATCTGAAAGACCCATGTTTGCCTTCATAGAGGATGTATTAGCTAATCTAAATGGGAAATCATTATCTACTTCCGATGGCATATATTTGGACTGGTATCTATTGGAGGAAGATAGCTGCAGCTTTGGAATTTATTCTTCCTATCAGAATTTGTTGGAAGAAATTAATTTGAAACCCGTAGAATTTGATCAGGAACCTTGTGGATATGATAGTATATTTTATAGATATGTTTTCTCCGATGATGCTTTAGACAGAGAAAGAACAGAAGACAAAGGTGAATTAAAGGAGCCTTTTCCTGATGGTATTTCAATGCTTCCTAGCCAAACAATTGACGTTGCTTCAAGCAAATTATTGAATGATGGATGTCAACAATTAGGAAGGCAGAATCTTGTAGCTGTTGGAAATACCGAGAAGGTTTTATCATCATGGAAATCACAATCAGAGTTGAATGATCCCAAATTTTTCTTGAATTCTCAAAAACCTGCTGGAACGAGAAAAGGTGAATCTGTATTTAGTGCAACCGACATCAATACTATTCTCCCTAAGGTTCCATGTGATGGACAATTGACCAACAATCCTTCGACGACCAGTGCTGATGTTAGTTTGAAGCAATTGAATGTCACATTACATCAAGTTTGTCTTTCTGATAACATTCTACATCTCATCAACAACTCCGAGAAAACTTATCTAGCTATCTTGCAGAATGAGACAGAGCTTAGGAAGACATATCTTCCATATGTTGCTGAAGATTATGTTCTAATGCTCAGCCTTCCAAAACAGAAATTGATAGATTGTGTTAAAAAAATATATTTGCTGGGAACAAGTAATTACTGGGAAGAAAAAGTAATGACATTAGCCACTTTATATGCCATTAAACAGATAGCTTGGTATTTGTGTTTCTATGGCATCCACCCAGCTCATCTTTATTTAAAGAAGTTATGTCAGAGCTTGGAATGCTTAAAATCGAGGCTGGGTTTCTTGGCGTCCTTGATTGAGGATGCAAGTAAAATGGTTGATAGAGAAATTACCATATCACATCCGGCACTTACTACTATCCAGGATATCTTATGCTCAAAGACTTCTTCTAGTACTCTCAAAGTTCTGGTTGTAGCAAACGAAATTTTTTGGGGTTCATTGAAAAAATTGTTTGGGTCTATGGGATTATCTTTTGAAGAGCTAAGTTTTGGGGGTCCTACTGATCAGCAAGTATTTAATGCAAACAGTATGGTGGATGAACTTGTTCCCAATTGCTTATTGGTATCCCAAGGGTAACTTCCAGCTTTATTAAGTAAACATTTCACAACCTTTTTGTGGTAGGTACATGTTTTATATGCTTAACGAAGCTGGATTAATATGTAATTGACAACAAGAGAGGTTGGCAAGGACAACTAAACATTCATTCCTTCATTATTAGTTGACGGCTTTAGGTGCAGATTTTATGCAGCAACAGATGAACCTATTTTCTGAGTTTCACGAGATTTTAACCTTTTTTTGCAATTATAATTTGTTTTTTAGTGCATTATAGTTTTATTTTCCCACAAGGTACAATTTAATCTGTTATTCAATGTTGGTCGAACAAACGAATTACAGCCATAAATAGGGATATTCAATGTGGAATATCATATATTTGCATGTTGGTAATCCATGTCATGCAGCATTTAAATGAAAAAAGGACTGGGGATAAACTCTAGGAAATGGGATCCATACCTCAAAAAAACCTTTCGAAATATTTTGCATCCGGCACATGATTGTATCATTTATTTTAATTTAAAACTAATTTTATCCCTTAGTTTTGAATTGATGAGAAGAATACCTTTTGCGTTAAATCGAATTTGACTTGTACATGTCTTTTGGAGTGTTTTTATTATTTCTTATTTGACTTCCACCAATTTCAAGGCACATATCTGGTAGTTTTCCATTCAACAAATTTAGCATTATCTTGGAATATGGAGGTATCAATGGTTCTTCTCAGATCTCCACTTACTTTACAAAATCAATCAACATGCCCCATCTACACTTTGTAATGTTGGAGCTGGAGAAATGTGGCAATTGCAAAGCATTTTGTAAAGGTGTAGGTTTGCCTCAGCATAATGAGCTGAAAATTGTAAGTTTGTTCCTTTTTGCATGCAAGTTTGTTAACTTATTTATCCATAAATTTACATGACAATGCTATCCGTATCTATTCTTAGGAAGAGAAGTCTTTGGTGGAGAATCAGACCAGGATGTTGGAGGAATTGTTGAACTTTTTACCTGTTGATGAAAAGAATATATTGGCACCTCCAGAGGCAACAATTGAAGCAGAGGACCTTAAAGTGCCCCTGCAAGTGTCAGTAGGACCAGTGTCCGGTAAATCTCAACATATCGACCTTGTGTCCTTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCCTATCAAAGACTTCTTGCATTGGAGAAAGACGGTGTGCAGGTTGTGGAACGAGATCTGAGTTTTCCAGTCGATCTAATCATTACTTCTGGACTTTGCTTAATGTGGTATGACTGCACAAACATTCATAGGAAAGCCAGTACTCCAAATGAAGCTTCTTCGTGCATGAATTTATGCATAGAGAACATTGCAACAGATGTTTTGACATCCCTAAGTTTTGCTTTTAGTGGTTGCATTCTGGTAATTTTTCTACCCTATGAAGACTACGTCTGTTTATTCTTATTACTTAGAAGAGACTATCCCCATTACCTTCATTTCGTACATTTTTACTTCTTCCCTTTGCATTTGAATCATTGGAATAGTTTTATAGCTGAATTTCTTGAGCATATCCTTGTGCTCTTCTTGAAGATGCCAGAGTTATCTTTATTGATGGTTATAGACTGGATCTACCAGCCGGCTACATGCTATGGCTCTGATGAACATGAAGAATTATTGTTTTTAGTCATAAGTTAGAAAGGTATCAGGTTTTCTGCACAGGAGGTCGAACCAAACTGGTCAATTTAACAGCTTTTCTTTCAAGTCCTAGGTAGTGGCATTTCATCAGAATCGAAGGAGTTTGATTGAAGCAAGATTTTAAATATAAAAGTCTGCTTATGTGAACCTGTCGATTCCCCACAAAGCACATCGATCCTATGGTACTGATATGATCTACCACACTTTTCTATTAAAATAAGATAAATCTCCCGAGAGGATCTCTCTAAGAGCCAGAGTACCAACATACGACAATTTCAATGGATGATTAACAAATACCTAACCTCACCTATTTATAATAACTCTAAACCCTAATTGGACCTAATTAATAAAATACTAATAATAGGCCCAAGCCCAATACATTTAAAATAGCAAATAACTAATAATAAATACTAATATTCCTAAACTGCCAAGGCCGGATCGTATCAATACTTTCCCCCCCAAGAGCCACCTTGTCCTCAAGGTGTTCCATCTCCGATGCCACCTTCTGCAGCTCCATCTTCTGGAGAAAAGTCAGTCACCTCAACATCCTGGTAATCGTGCGCATCTCGAACGACCCACACATCCAAATTCTGAAGCTCTTTCTTCTCCTCCCCACCCGAAATCTGGCCCCGTGCAAGTATCCCCTACAAAATTCCCACGAAATTCCACCCTCCGATCTAACCTGACGGGCCCACCCTGACCCGGTCCGCCCGTGCCAGACCCGCCCCAGCCTCCGCTCGGACCACCGGCGCCGCCTGCGCCCGGCCCGTCCCAACCCAGGCCGACTCCGCCCGAGCCGAAACCCCTCTCGCGCTCGCCCAGACCCACGCCCGAGCGGCGCCGGACCCCGAACACGGCCCTCGCCCCGGCGCTGCTCCACGCCCCGCTTCGTCCAAGCCCACCTCGGACCACCCCAGCCGCCTCGCGCCCCCTATGCGCCCGGCCTTCACCACACACCCTCATGCCCTCGCGCCAACCCGCTCGCCCGACTGCACCTCCTGCCTGACACCCCGCGAGACCCCGGCGCGCCACGCGCCCGCGCGCTGCGCCCTTCGCTCGAGCCCCACCACGCGACCACCGCCGCCACCAGCCCCTGCATCATGCGCGCCGCCCACCGACCCGCCGGTAGCCCCTCTCGGACAGACCCTGCCGTCCGCCCTGCTCGCGTCGCCCACGCCGGTCACCAGGCCGATGCCCCAGCCCGCAGCCCCGACATCACCACTCGCCCCCGTTGCTCCGCGCTGCTCGCTGCGCAGCATTTCTCCGAGCCAGCGTCGCGCTCCATGCTTTGCCTCGGCCCACCCTGGCGCGACCTCCGTCGCGCCCTGCTTCGCCACGCCAGCCGCCGCCGCCCCTGCATCACCAGAGCTAGCCCCAGCCGCGCCGCTCGATCCTTCCCCTGCAGCCTCGGGCATCGAGCCCTTCCCCTTGTCTGCTCGGATTGTCTCCACTAAAAGTTCCAGATTTCGCTTCATCGTCTCGAGCTTCGAATCCTGCAAATCCAGCCTTTTCCCTAACCTTTCTTCCATCGCTTCCATCTTTGCGTTAGTCTCCTGTAACTGCCTAGCCAAGTCGGCCGTTCCTTCTTCACACGCTTGCATCCTGGATTCCATCTTAGTAGTAACCATTCCCAGATCGGCAAACGGCTCTGATACCAAAATGATATGATCTACCACACTTTTCTATTAAAATAAGATAAATCTCCCGAGAGGATCTCTCTAAGAGCCAGAGTACCAACATACGACAATTTCAATGGATGATTAACAAAGACCTAACCTCACCTATTTATAATAACTCTAAACCCTAATTGGACCTAATTAATAAAATACTAATAATAGGCCCAAGCCCAATACATTTAAAATAGCAATTAACTAATAATAAATACTAATATTCCTAAACTACCAAGGCCGGATCGTATCAGGTACTTGGTTCGTTTATGGAAAATAAGTCCTTAATTTCCTGTTGTTTGCAAACAGGCTTGTACTGTTTTGTTTTTCTTCTTTAAGCATACAAACATCTTTTCGTATTCAGTCATTTTCTATATTTGAATCATTTGTGTACAAGCGAAAATAGAAAGTTTAGTCAATGCATTTGTATTGTCTGTAGAATCTCACATTCATTACTAGCTGTACTAATAATTCCTGCATGTGTTAGCAAGGACATGGAAACTCTTTCATCATAGTGCAAAAATTAGTTTGTTAAAAGACCCCAGTAGATTGTTTCTTGTTGATATTGCTTACTCTCTTTTGATACAAACATTAGATTTTTCTTCAGGTCTTTGAGGGAGAAATCAGTTACCTTTCCATCGTAATGGAATCATCAGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCATCCGAGTTGACAGATGAAATTATCTTAGGCTGCATTGAGAATGTTTCTAAGTCGATGAATAGGCACCTATACCCCAAGATGTCTGAATCAGAAACACTTGCGGAATCATTTCTTACGAGTTTCCCTTCAATTAATCCTTTGACAGCTCATGGGATACTTTCTTCCGAAAGCTTTCTTTGTGACTTTCTAGAGTGGCCACATGAGCGCAGGCTCCATGCAGTTAAAAAATATTGTATTCCTGATGAAAGTGTGTCTCTATTTAGTGTTCTGTGCAAATATGGCGAGCGGGAGGATTCAAAATCCGTGATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCTGATTCAGACAAGTGCTACTTTAATGGTAATTCCAAAAGAAAGAGAAGAAATTTCACTGGTGGAACCCAATGCATTGATAAAAATATGGATGTTTTTAATTCCGATGCACCGAATCCATTCAGTGCTGGCTCTAGAGAAACTTTATCAGCATCCAAGTCATTAGGTTCTCAAATGTTTGAAGATCAAGAAATCTTTTCTGGTCTCAAGGGACTATCTTCATCTGTGAATCATTTCTTTGATCAAAACCATAATCTAGAGTCTTTTGATGCAAGTATATCTATGAATCCTAACAGTTTCGGTAAGTCACGTGATTCTTGGATCTCCACGTCTCCTGAAATATCCAATGAGATTAGAAGGCATTGTTCATCATATGTTCAAAATCAGGGCTTAGATTCAAATAGAAGGAAAAGGCACAACTTGCATAACATGAATAAGTCTGAGAATCAGCATGAGGAGCTTACAGGTGAAGTGGTCAGTCTGATTGATGATCCTGTATTCAAAGATGATTTTGCATCTATGGCTCCTATGAATTTCTTGCCTTCGATGCTTGATTATGAAAAAGATTCACCAAGAAAGTCTAAAATTCAAAGGAAATTGTATCATGGACAAAGCGATCACCCTTTCTCTGCAGTTGGTATGGCTAACAATTCAAGTTCAGATTTTTGGAGTCCTATGAATTTCCATAGGCAGAATTCAGGTGGATTGGACAATCATTTTCCAGATCCTAGTTTCCAACCTCGGTACAAGGATGATCACTCAGATGAAGGTTTAATGCAAAATTCTGTAAGAGATTCGAAAGTATTATTTTCACTCTCAGAAAAGGGCATGTCGCATTCAGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGAAAGTTCACCTTGGACCATGGAATTTCTTAACCGAATTAAGGAAAAAAGCCGAAATCGTCTGCATTCAGTTCCATGTGGCTCATCTTCACCGTTTCCTGAGCATTTGGGTAATGTGAGAAAAACTGTTAAAAGAAGAAGTCCCTCTATTCTGGAATTTTTTAAATACCAAGGGGGCAGCACTCAGAGGAAGAAACCGGAACAAAAGAGACAGAAACAGTCAATGCAGTCATCAAACTCATCCAAGAATGTATTAGTTCCAACCAATGAACTCTCTTCGTGGACGCCTATTGATAAAAGATCAAGACAGGTTCGCATGTGCTTATTTTTTATATTACATGACAGCATTCTACATTCTTCTAAAACAAATTTACTGAAATCAATTTCAGACTTTATCGTTTGCAATTGATGGGAATGAGAGGCAAACTAAGTTGGTCTGGAGCAATGACAATTATGGTCTGGGACAAAGCTCACAGAAACTTACTAACAAATGA
mRNA sequence
ATGCGAACTCGGTTCCTCGACATCGATTACTTCGCCGCCGGAAATGAACCTTTCCGGTGCCTCCCTGTCCCTCACCTCGCTTCGAAGCCGCCACTATCCACCGCCGGCGATCTCCTCCACTTCGATTTTCTCCCTGAAATCTCTCTCGCAATCGACAGATTAGCGATCGATTCTGCTCTCTCCAAGTTCTTCGACGACGTTCTCCCGCGCAGAATCGACGATGATAATGATTATCGCGATTCTAGGTTTCAAGGTTCCACGGAGAGGATTCGATTCCTGGAGGAAGAAGCTAAGTGTGCTTACGAAGATAATGTGGAGGGGGGATGGAAGAATTTTGGATCTGAAACATCAGAAACTGAATTCAAGGCTATTGGGACTGTTATAAGGAATAGAAACCTCACATATGATATGATCCAATTTGAAACACCTCAGCTTGATGCGTTCTTGGAAAATGCCTTCTTGTTTGAAAGGGAGGAGGTACAAATTCTTGCAGAATTTCCAGAGGCTAAATTTAATCTTGAGACTCTTAATCAAGGGCTTCTTAACTGCCCTTCCGAAGTCAAAGAATCAGTTTATGCAATTGAAGGCATTACCTCAGAATATCTCTTGGACCAAAAATCTTGCTTGGTTGAAGAAGATTTTGCTCAGGACCAGAAGCTATTGCATCGATTGACTTTTCCCTTTTTAGAAGTAGATGAGATGGTTCTTGAAACTTCGGCATTCTTTTCCATGCAGGATGAACTTTGTTTTGTTCTTGACAATAGTGAATCACCTCACAGTATACAAGATGATAATTTACTAGTCAATGATGAAGAAAATTTGTGCTCCATGAAGAGTGACATCGAAGAATTTCTTTTAGATCATTTTTTGAGGCCATGTGCTGTTTCTGAGGTTGCATCCCCTGACATTTCTGGAGGATCAGACTTAATGAGCTTGATGGAAATTTTGGAGATTCCAGTAAGCTCTGCAGTTCAAACAAAACCAAGCTGCGATTTACCTGTAGGACTAGCTATTTTTGAAGAATTCCAGCTGCTGGACATATACTCGAATCAACCTTTTGAAGCCTTCTTTGATTTGGAATTATCAGCCGTGTCAGAAATAAGTGACTGTATGTCCATAGAAAACATGAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTTGTAGATGACACGTTCAAGTCATTACCTGTACCTCTCTTATCTAGTGAGGAATCTGAAAGACCCATGTTTGCCTTCATAGAGGATGTATTAGCTAATCTAAATGGGAAATCATTATCTACTTCCGATGGCATATATTTGGACTGGTATCTATTGGAGGAAGATAGCTGCAGCTTTGGAATTTATTCTTCCTATCAGAATTTGTTGGAAGAAATTAATTTGAAACCCGTAGAATTTGATCAGGAACCTTGTGGATATGATAGTATATTTTATAGATATGTTTTCTCCGATGATGCTTTAGACAGAGAAAGAACAGAAGACAAAGGTGAATTAAAGGAGCCTTTTCCTGATGGTATTTCAATGCTTCCTAGCCAAACAATTGACGTTGCTTCAAGCAAATTATTGAATGATGGATGTCAACAATTAGGAAGGCAGAATCTTGTAGCTGTTGGAAATACCGAGAAGGTTTTATCATCATGGAAATCACAATCAGAGTTGAATGATCCCAAATTTTTCTTGAATTCTCAAAAACCTGCTGGAACGAGAAAAGGTGAATCTGTATTTAGTGCAACCGACATCAATACTATTCTCCCTAAGGTTCCATGTGATGGACAATTGACCAACAATCCTTCGACGACCAGTGCTGATGTTAGTTTGAAGCAATTGAATGTCACATTACATCAAGTTTGTCTTTCTGATAACATTCTACATCTCATCAACAACTCCGAGAAAACTTATCTAGCTATCTTGCAGAATGAGACAGAGCTTAGGAAGACATATCTTCCATATGTTGCTGAAGATTATGTTCTAATGCTCAGCCTTCCAAAACAGAAATTGATAGATTGTGTTAAAAAAATATATTTGCTGGGAACAAGTAATTACTGGGAAGAAAAAGTAATGACATTAGCCACTTTATATGCCATTAAACAGATAGCTTGGTATTTGTGTTTCTATGGCATCCACCCAGCTCATCTTTATTTAAAGAAGTTATGTCAGAGCTTGGAATGCTTAAAATCGAGGCTGGGTTTCTTGGCGTCCTTGATTGAGGATGCAAGTAAAATGGTTGATAGAGAAATTACCATATCACATCCGGCACTTACTACTATCCAGGATATCTTATGCTCAAAGACTTCTTCTAGTACTCTCAAAGTTCTGGTTGTAGCAAACGAAATTTTTTGGGGTTCATTGAAAAAATTGTTTGGGTCTATGGGATTATCTTTTGAAGAGCTAAGTTTTGGGGGTCCTACTGATCAGCAAGTATTTAATGCAAACAGTATGGTGGATGAACTTGTTCCCAATTGCTTATTGGTATCCCAAGGGCACATATCTGGTAGTTTTCCATTCAACAAATTTAGCATTATCTTGGAATATGGAGGTATCAATGGTTCTTCTCAGATCTCCACTTACTTTACAAAATCAATCAACATGCCCCATCTACACTTTGTAATGTTGGAGCTGGAGAAATGTGGCAATTGCAAAGCATTTTGTAAAGGTGTAGGTTTGCCTCAGCATAATGAGCTGAAAATTGAAGAGAAGTCTTTGGTGGAGAATCAGACCAGGATGTTGGAGGAATTGTTGAACTTTTTACCTGTTGATGAAAAGAATATATTGGCACCTCCAGAGGCAACAATTGAAGCAGAGGACCTTAAAGTGCCCCTGCAAGTGTCAGTAGGACCAGTGTCCGGTAAATCTCAACATATCGACCTTGTGTCCTTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCCTATCAAAGACTTCTTGCATTGGAGAAAGACGGTGTGCAGGTTGTGGAACGAGATCTGAGTTTTCCAGTCGATCTAATCATTACTTCTGGACTTTGCTTAATGTGGTATGACTGCACAAACATTCATAGGAAAGCCAGTACTCCAAATGAAGCTTCTTCGTGCATGAATTTATGCATAGAGAACATTGCAACAGATGTTTTGACATCCCTAAGTTTTGCTTTTAGTGGTTGCATTCTGGTCTTTGAGGGAGAAATCAGTTACCTTTCCATCGTAATGGAATCATCAGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCATCCGAGTTGACAGATGAAATTATCTTAGGCTGCATTGAGAATGTTTCTAAGTCGATGAATAGGCACCTATACCCCAAGATGTCTGAATCAGAAACACTTGCGGAATCATTTCTTACGAGTTTCCCTTCAATTAATCCTTTGACAGCTCATGGGATACTTTCTTCCGAAAGCTTTCTTTGTGACTTTCTAGAGTGGCCACATGAGCGCAGGCTCCATGCAGTTAAAAAATATTGTATTCCTGATGAAAGTGTGTCTCTATTTAGTGTTCTGTGCAAATATGGCGAGCGGGAGGATTCAAAATCCGTGATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCTGATTCAGACAAGTGCTACTTTAATGGTAATTCCAAAAGAAAGAGAAGAAATTTCACTGGTGGAACCCAATGCATTGATAAAAATATGGATGTTTTTAATTCCGATGCACCGAATCCATTCAGTGCTGGCTCTAGAGAAACTTTATCAGCATCCAAGTCATTAGGTTCTCAAATGTTTGAAGATCAAGAAATCTTTTCTGGTCTCAAGGGACTATCTTCATCTGTGAATCATTTCTTTGATCAAAACCATAATCTAGAGTCTTTTGATGCAAGTATATCTATGAATCCTAACAGTTTCGGTAAGTCACGTGATTCTTGGATCTCCACGTCTCCTGAAATATCCAATGAGATTAGAAGGCATTGTTCATCATATGTTCAAAATCAGGGCTTAGATTCAAATAGAAGGAAAAGGCACAACTTGCATAACATGAATAAGTCTGAGAATCAGCATGAGGAGCTTACAGGTGAAGTGGTCAGTCTGATTGATGATCCTGTATTCAAAGATGATTTTGCATCTATGGCTCCTATGAATTTCTTGCCTTCGATGCTTGATTATGAAAAAGATTCACCAAGAAAGTCTAAAATTCAAAGGAAATTGTATCATGGACAAAGCGATCACCCTTTCTCTGCAGTTGGTATGGCTAACAATTCAAGTTCAGATTTTTGGAGTCCTATGAATTTCCATAGGCAGAATTCAGGTGGATTGGACAATCATTTTCCAGATCCTAGTTTCCAACCTCGGTACAAGGATGATCACTCAGATGAAGGTTTAATGCAAAATTCTGTAAGAGATTCGAAAGTATTATTTTCACTCTCAGAAAAGGGCATGTCGCATTCAGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGAAAGTTCACCTTGGACCATGGAATTTCTTAACCGAATTAAGGAAAAAAGCCGAAATCGTCTGCATTCAGTTCCATGTGGCTCATCTTCACCGTTTCCTGAGCATTTGGGTAATGTGAGAAAAACTGTTAAAAGAAGAAGTCCCTCTATTCTGGAATTTTTTAAATACCAAGGGGGCAGCACTCAGAGGAAGAAACCGGAACAAAAGAGACAGAAACAGTCAATGCAGTCATCAAACTCATCCAAGAATGTATTAGTTCCAACCAATGAACTCTCTTCGTGGACGCCTATTGATAAAAGATCAAGACAGACTTTATCGTTTGCAATTGATGGGAATGAGAGGCAAACTAAGTTGGTCTGGAGCAATGACAATTATGGTCTGGGACAAAGCTCACAGAAACTTACTAACAAATGA
Coding sequence (CDS)
ATGCGAACTCGGTTCCTCGACATCGATTACTTCGCCGCCGGAAATGAACCTTTCCGGTGCCTCCCTGTCCCTCACCTCGCTTCGAAGCCGCCACTATCCACCGCCGGCGATCTCCTCCACTTCGATTTTCTCCCTGAAATCTCTCTCGCAATCGACAGATTAGCGATCGATTCTGCTCTCTCCAAGTTCTTCGACGACGTTCTCCCGCGCAGAATCGACGATGATAATGATTATCGCGATTCTAGGTTTCAAGGTTCCACGGAGAGGATTCGATTCCTGGAGGAAGAAGCTAAGTGTGCTTACGAAGATAATGTGGAGGGGGGATGGAAGAATTTTGGATCTGAAACATCAGAAACTGAATTCAAGGCTATTGGGACTGTTATAAGGAATAGAAACCTCACATATGATATGATCCAATTTGAAACACCTCAGCTTGATGCGTTCTTGGAAAATGCCTTCTTGTTTGAAAGGGAGGAGGTACAAATTCTTGCAGAATTTCCAGAGGCTAAATTTAATCTTGAGACTCTTAATCAAGGGCTTCTTAACTGCCCTTCCGAAGTCAAAGAATCAGTTTATGCAATTGAAGGCATTACCTCAGAATATCTCTTGGACCAAAAATCTTGCTTGGTTGAAGAAGATTTTGCTCAGGACCAGAAGCTATTGCATCGATTGACTTTTCCCTTTTTAGAAGTAGATGAGATGGTTCTTGAAACTTCGGCATTCTTTTCCATGCAGGATGAACTTTGTTTTGTTCTTGACAATAGTGAATCACCTCACAGTATACAAGATGATAATTTACTAGTCAATGATGAAGAAAATTTGTGCTCCATGAAGAGTGACATCGAAGAATTTCTTTTAGATCATTTTTTGAGGCCATGTGCTGTTTCTGAGGTTGCATCCCCTGACATTTCTGGAGGATCAGACTTAATGAGCTTGATGGAAATTTTGGAGATTCCAGTAAGCTCTGCAGTTCAAACAAAACCAAGCTGCGATTTACCTGTAGGACTAGCTATTTTTGAAGAATTCCAGCTGCTGGACATATACTCGAATCAACCTTTTGAAGCCTTCTTTGATTTGGAATTATCAGCCGTGTCAGAAATAAGTGACTGTATGTCCATAGAAAACATGAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTTGTAGATGACACGTTCAAGTCATTACCTGTACCTCTCTTATCTAGTGAGGAATCTGAAAGACCCATGTTTGCCTTCATAGAGGATGTATTAGCTAATCTAAATGGGAAATCATTATCTACTTCCGATGGCATATATTTGGACTGGTATCTATTGGAGGAAGATAGCTGCAGCTTTGGAATTTATTCTTCCTATCAGAATTTGTTGGAAGAAATTAATTTGAAACCCGTAGAATTTGATCAGGAACCTTGTGGATATGATAGTATATTTTATAGATATGTTTTCTCCGATGATGCTTTAGACAGAGAAAGAACAGAAGACAAAGGTGAATTAAAGGAGCCTTTTCCTGATGGTATTTCAATGCTTCCTAGCCAAACAATTGACGTTGCTTCAAGCAAATTATTGAATGATGGATGTCAACAATTAGGAAGGCAGAATCTTGTAGCTGTTGGAAATACCGAGAAGGTTTTATCATCATGGAAATCACAATCAGAGTTGAATGATCCCAAATTTTTCTTGAATTCTCAAAAACCTGCTGGAACGAGAAAAGGTGAATCTGTATTTAGTGCAACCGACATCAATACTATTCTCCCTAAGGTTCCATGTGATGGACAATTGACCAACAATCCTTCGACGACCAGTGCTGATGTTAGTTTGAAGCAATTGAATGTCACATTACATCAAGTTTGTCTTTCTGATAACATTCTACATCTCATCAACAACTCCGAGAAAACTTATCTAGCTATCTTGCAGAATGAGACAGAGCTTAGGAAGACATATCTTCCATATGTTGCTGAAGATTATGTTCTAATGCTCAGCCTTCCAAAACAGAAATTGATAGATTGTGTTAAAAAAATATATTTGCTGGGAACAAGTAATTACTGGGAAGAAAAAGTAATGACATTAGCCACTTTATATGCCATTAAACAGATAGCTTGGTATTTGTGTTTCTATGGCATCCACCCAGCTCATCTTTATTTAAAGAAGTTATGTCAGAGCTTGGAATGCTTAAAATCGAGGCTGGGTTTCTTGGCGTCCTTGATTGAGGATGCAAGTAAAATGGTTGATAGAGAAATTACCATATCACATCCGGCACTTACTACTATCCAGGATATCTTATGCTCAAAGACTTCTTCTAGTACTCTCAAAGTTCTGGTTGTAGCAAACGAAATTTTTTGGGGTTCATTGAAAAAATTGTTTGGGTCTATGGGATTATCTTTTGAAGAGCTAAGTTTTGGGGGTCCTACTGATCAGCAAGTATTTAATGCAAACAGTATGGTGGATGAACTTGTTCCCAATTGCTTATTGGTATCCCAAGGGCACATATCTGGTAGTTTTCCATTCAACAAATTTAGCATTATCTTGGAATATGGAGGTATCAATGGTTCTTCTCAGATCTCCACTTACTTTACAAAATCAATCAACATGCCCCATCTACACTTTGTAATGTTGGAGCTGGAGAAATGTGGCAATTGCAAAGCATTTTGTAAAGGTGTAGGTTTGCCTCAGCATAATGAGCTGAAAATTGAAGAGAAGTCTTTGGTGGAGAATCAGACCAGGATGTTGGAGGAATTGTTGAACTTTTTACCTGTTGATGAAAAGAATATATTGGCACCTCCAGAGGCAACAATTGAAGCAGAGGACCTTAAAGTGCCCCTGCAAGTGTCAGTAGGACCAGTGTCCGGTAAATCTCAACATATCGACCTTGTGTCCTTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCCTATCAAAGACTTCTTGCATTGGAGAAAGACGGTGTGCAGGTTGTGGAACGAGATCTGAGTTTTCCAGTCGATCTAATCATTACTTCTGGACTTTGCTTAATGTGGTATGACTGCACAAACATTCATAGGAAAGCCAGTACTCCAAATGAAGCTTCTTCGTGCATGAATTTATGCATAGAGAACATTGCAACAGATGTTTTGACATCCCTAAGTTTTGCTTTTAGTGGTTGCATTCTGGTCTTTGAGGGAGAAATCAGTTACCTTTCCATCGTAATGGAATCATCAGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCATCCGAGTTGACAGATGAAATTATCTTAGGCTGCATTGAGAATGTTTCTAAGTCGATGAATAGGCACCTATACCCCAAGATGTCTGAATCAGAAACACTTGCGGAATCATTTCTTACGAGTTTCCCTTCAATTAATCCTTTGACAGCTCATGGGATACTTTCTTCCGAAAGCTTTCTTTGTGACTTTCTAGAGTGGCCACATGAGCGCAGGCTCCATGCAGTTAAAAAATATTGTATTCCTGATGAAAGTGTGTCTCTATTTAGTGTTCTGTGCAAATATGGCGAGCGGGAGGATTCAAAATCCGTGATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCTGATTCAGACAAGTGCTACTTTAATGGTAATTCCAAAAGAAAGAGAAGAAATTTCACTGGTGGAACCCAATGCATTGATAAAAATATGGATGTTTTTAATTCCGATGCACCGAATCCATTCAGTGCTGGCTCTAGAGAAACTTTATCAGCATCCAAGTCATTAGGTTCTCAAATGTTTGAAGATCAAGAAATCTTTTCTGGTCTCAAGGGACTATCTTCATCTGTGAATCATTTCTTTGATCAAAACCATAATCTAGAGTCTTTTGATGCAAGTATATCTATGAATCCTAACAGTTTCGGTAAGTCACGTGATTCTTGGATCTCCACGTCTCCTGAAATATCCAATGAGATTAGAAGGCATTGTTCATCATATGTTCAAAATCAGGGCTTAGATTCAAATAGAAGGAAAAGGCACAACTTGCATAACATGAATAAGTCTGAGAATCAGCATGAGGAGCTTACAGGTGAAGTGGTCAGTCTGATTGATGATCCTGTATTCAAAGATGATTTTGCATCTATGGCTCCTATGAATTTCTTGCCTTCGATGCTTGATTATGAAAAAGATTCACCAAGAAAGTCTAAAATTCAAAGGAAATTGTATCATGGACAAAGCGATCACCCTTTCTCTGCAGTTGGTATGGCTAACAATTCAAGTTCAGATTTTTGGAGTCCTATGAATTTCCATAGGCAGAATTCAGGTGGATTGGACAATCATTTTCCAGATCCTAGTTTCCAACCTCGGTACAAGGATGATCACTCAGATGAAGGTTTAATGCAAAATTCTGTAAGAGATTCGAAAGTATTATTTTCACTCTCAGAAAAGGGCATGTCGCATTCAGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGAAAGTTCACCTTGGACCATGGAATTTCTTAACCGAATTAAGGAAAAAAGCCGAAATCGTCTGCATTCAGTTCCATGTGGCTCATCTTCACCGTTTCCTGAGCATTTGGGTAATGTGAGAAAAACTGTTAAAAGAAGAAGTCCCTCTATTCTGGAATTTTTTAAATACCAAGGGGGCAGCACTCAGAGGAAGAAACCGGAACAAAAGAGACAGAAACAGTCAATGCAGTCATCAAACTCATCCAAGAATGTATTAGTTCCAACCAATGAACTCTCTTCGTGGACGCCTATTGATAAAAGATCAAGACAGACTTTATCGTTTGCAATTGATGGGAATGAGAGGCAAACTAAGTTGGTCTGGAGCAATGACAATTATGGTCTGGGACAAAGCTCACAGAAACTTACTAACAAATGA
Protein sequence
MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSALSKFFDDVLPRRIDDDNDYRDSRFQGSTERIRFLEEEAKCAYEDNVEGGWKNFGSETSETEFKAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAEFPEAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLTFPFLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFLLDHFLRPCAVSEVASPDISGGSDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLLDIYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLSSEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLKPVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKLLNDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDINTILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNETELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAWYLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDILCSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPNCLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCKAFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPLQVSVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERDLSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCILVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDESVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKNMDVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESFDASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSENQHEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPFSAVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQPRYKDDHSDEGLMQNSVRDSKVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSSSPFPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNELSSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK
Homology
BLAST of Sed0022815 vs. NCBI nr
Match:
XP_022971834.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima])
HSP 1 Score: 2526.9 bits (6548), Expect = 0.0e+00
Identity = 1304/1666 (78.27%), Postives = 1429/1666 (85.77%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI+DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEFKAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAEFP 180
WKNFGSETSE EFK IGT IRNRN + DMIQFETPQLDAFLENAFLFE EEVQIL P
Sbjct: 121 SWKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAMP 180
Query: 181 EAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLTFP 240
E +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ TFP
Sbjct: 181 EVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFP 240
Query: 241 FLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFLLD 300
FLEVDEMVLET AF S+QDEL F+L+N+ES H IQDDNLLVN+EE L M+ D EEFL D
Sbjct: 241 FLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLSD 300
Query: 301 HFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLLD 360
HFLRPCAVSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQLLD
Sbjct: 301 HFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLD 360
Query: 361 IYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLS 420
YSNQ F FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDD FKSLPVP+LS
Sbjct: 361 TYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPILS 420
Query: 421 SEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLK 480
S+ SE+P+ AFIEDVLANLN +SLS SDGIYLDW+LL+ S S G+YSSYQN+LEEINLK
Sbjct: 421 SQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINLK 480
Query: 481 PVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKLL 540
PVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVAS KLL
Sbjct: 481 PVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKLL 540
Query: 541 NDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDINT 600
N+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKPAG RK ESVFSA D NT
Sbjct: 541 NERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTNT 600
Query: 601 ILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNETE 660
LPKV DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNETE
Sbjct: 601 TLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETE 660
Query: 661 LRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAWYL 720
LRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI WYL
Sbjct: 661 LRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYL 720
Query: 721 CFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDILCS 780
CF+GIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMVD+EITISHPALTTIQ+ILCS
Sbjct: 721 CFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILCS 780
Query: 781 KTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPNCL 840
+TS+S+LKVLVVAN+IFW SLK L GS+G+SF E+++G TD+QV NAN+MVD+L NCL
Sbjct: 781 RTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNCL 840
Query: 841 LVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCKAF 900
LVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCKAF
Sbjct: 841 LVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAF 900
Query: 901 CKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPLQV 960
C+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA + TIEAE+ +VPL+
Sbjct: 901 CEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLRA 960
Query: 961 SVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERDLS 1020
V PVS KSQH DLVSFPEAI+IVNTQKFEKEMIV RRSSYQR+LALEK+GVQVVERDL
Sbjct: 961 PVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDLC 1020
Query: 1021 FPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCILV 1080
PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+LV
Sbjct: 1021 LPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLV 1080
Query: 1081 FEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRHLY 1140
FEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R +Y
Sbjct: 1081 FEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIY 1140
Query: 1141 PKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDESV 1200
PKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+ +
Sbjct: 1141 PKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCI 1200
Query: 1201 SLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKNMD 1260
SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQCI+KN D
Sbjct: 1201 SLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTD 1260
Query: 1261 VFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESFDA 1320
S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SFDA
Sbjct: 1261 CLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDA 1320
Query: 1321 SISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSENQH 1380
++SM+P K RD WIST+PEIS+EIRR CSS+VQNQGLD +++K HN HNMNKSEN H
Sbjct: 1321 TVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENHH 1380
Query: 1381 EELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPFSA 1440
EEL EV +LID+PV KD FA+MAPMNFLPSMLD E DS RKSKIQR+L +GQSDHPF A
Sbjct: 1381 EELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFCA 1440
Query: 1441 VGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVRDS 1500
V + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL+QN +RDS
Sbjct: 1441 VDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRDS 1500
Query: 1501 KVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSSSP 1560
KV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSSSP
Sbjct: 1501 KVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSP 1560
Query: 1561 FPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNEL 1620
FPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T EL
Sbjct: 1561 FPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATREL 1620
Query: 1621 SSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
SS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 SSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of Sed0022815 vs. NCBI nr
Match:
XP_023554172.1 (protein SHORTAGE IN CHIASMATA 1 isoform X4 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2522.3 bits (6536), Expect = 0.0e+00
Identity = 1305/1667 (78.28%), Postives = 1429/1667 (85.72%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI+DD+ YRD S F GS ERI R E+EAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSGSVGTRLREQEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEF-KAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAEF 180
WKNFGSETSE EF K IGT IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQIL
Sbjct: 121 SWKNFGSETSEMEFIKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEKEEVQILTGM 180
Query: 181 PEAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLTF 240
PE +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFLL 300
PFLEVDEMVLET AF S+QDEL F+L+N+ES H IQDDNLLVN+EE L SM+ D EEFL
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHMIQDDNLLVNNEEYLSSMRCDAEEFLS 300
Query: 301 DHFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLL 360
DHFLRPCAVSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGLSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLL 420
D YSNQ F DLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDDTFKSLPVP+L
Sbjct: 361 DTYSNQHFGVILDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL 420
Query: 421 SSEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINL 480
SS+ SE+P+ AFIEDVLANLN +SLS SDGIYLDW+LL+E S S G+YSSYQN+LEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKL 540
KPVEFDQEPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVASSKL
Sbjct: 481 KPVEFDQEPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSKL 540
Query: 541 LNDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDIN 600
LN+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKPA RK ESVFS D N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPARVRKSESVFSEIDTN 600
Query: 601 TILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNET 660
T LPKVP DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNET
Sbjct: 601 TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAWY 720
ELRK YLPYVAEDY+LMLSLPKQ LIDC+KKIYL GT+ YWEEK+MTLATLYA KQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQMLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDILC 780
LCFYGIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMV REITISHPALTTIQ+ILC
Sbjct: 721 LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC 780
Query: 781 SKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPNC 840
S+TS S+LKVLVVAN+IFW SLKKL GS+G+SF EL++G TD+QV NAN+MVD+L NC
Sbjct: 781 SRTSISSLKVLVVANQIFWWSLKKLLGSLGISFAELNYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCKA 900
LLVS+ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCKA
Sbjct: 841 LLVSEEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPLQ 960
FC+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA P+ TIEAE+ +V L+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVSLR 960
Query: 961 VSVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERDL 1020
V PVS KSQH DLVSFPEAI+IVNTQKFEKEMIV RRSSYQR+LALEK+GVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCIL 1080
PVDLII G+CL WYDCTNI RK ST NEAS +NLCIENIATDVLTSLSFAF GC+L
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLSLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRHL 1140
VFEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDES 1200
YPKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKNM 1260
+SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGG+QCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGSQCIEKNT 1260
Query: 1261 DVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESFD 1320
D S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSENQ 1380
A++SM+P K RD WIST+PEIS+EIRRHCSS+VQNQGLD +++K HN HNMNKSEN
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPFS 1440
HEEL EV +LID+PV KD FA+MAPMNFLPSML+ E DS RKSKIQR+L +GQSDHPF
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVRD 1500
AV + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL QN +RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNPLRD 1500
Query: 1501 SKVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSSS 1560
SKV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSSS
Sbjct: 1501 SKVSFSLSEKHTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNE 1620
PFPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
LSS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1666
BLAST of Sed0022815 vs. NCBI nr
Match:
XP_022971833.1 (protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima])
HSP 1 Score: 2521.9 bits (6535), Expect = 0.0e+00
Identity = 1304/1668 (78.18%), Postives = 1429/1668 (85.67%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI+DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEF--KAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAE 180
WKNFGSETSE EF K IGT IRNRN + DMIQFETPQLDAFLENAFLFE EEVQIL
Sbjct: 121 SWKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTA 180
Query: 181 FPEAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLT 240
PE +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ T
Sbjct: 181 MPEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFT 240
Query: 241 FPFLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFL 300
FPFLEVDEMVLET AF S+QDEL F+L+N+ES H IQDDNLLVN+EE L M+ D EEFL
Sbjct: 241 FPFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFL 300
Query: 301 LDHFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQL 360
DHFLRPCAVSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQL
Sbjct: 301 SDHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQL 360
Query: 361 LDIYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPL 420
LD YSNQ F FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDD FKSLPVP+
Sbjct: 361 LDTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPI 420
Query: 421 LSSEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEIN 480
LSS+ SE+P+ AFIEDVLANLN +SLS SDGIYLDW+LL+ S S G+YSSYQN+LEEIN
Sbjct: 421 LSSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEIN 480
Query: 481 LKPVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSK 540
LKPVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVAS K
Sbjct: 481 LKPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRK 540
Query: 541 LLNDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDI 600
LLN+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKPAG RK ESVFSA D
Sbjct: 541 LLNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDT 600
Query: 601 NTILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNE 660
NT LPKV DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 NTTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNE 660
Query: 661 TELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAW 720
TELRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI W
Sbjct: 661 TELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVW 720
Query: 721 YLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDIL 780
YLCF+GIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMVD+EITISHPALTTIQ+IL
Sbjct: 721 YLCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEIL 780
Query: 781 CSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPN 840
CS+TS+S+LKVLVVAN+IFW SLK L GS+G+SF E+++G TD+QV NAN+MVD+L N
Sbjct: 781 CSRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASN 840
Query: 841 CLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCK 900
CLLVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCK
Sbjct: 841 CLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCK 900
Query: 901 AFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPL 960
AFC+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA + TIEAE+ +VPL
Sbjct: 901 AFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPL 960
Query: 961 QVSVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERD 1020
+ V PVS KSQH DLVSFPEAI+IVNTQKFEKEMIV RRSSYQR+LALEK+GVQVVERD
Sbjct: 961 RAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERD 1020
Query: 1021 LSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCI 1080
L PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+
Sbjct: 1021 LCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCV 1080
Query: 1081 LVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRH 1140
LVFEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R
Sbjct: 1081 LVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRR 1140
Query: 1141 LYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDE 1200
+YPKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+
Sbjct: 1141 IYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDD 1200
Query: 1201 SVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKN 1260
+SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQCI+KN
Sbjct: 1201 CISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKN 1260
Query: 1261 MDVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESF 1320
D S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SF
Sbjct: 1261 TDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASF 1320
Query: 1321 DASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSEN 1380
DA++SM+P K RD WIST+PEIS+EIRR CSS+VQNQGLD +++K HN HNMNKSEN
Sbjct: 1321 DATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSEN 1380
Query: 1381 QHEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPF 1440
HEEL EV +LID+PV KD FA+MAPMNFLPSMLD E DS RKSKIQR+L +GQSDHPF
Sbjct: 1381 HHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPF 1440
Query: 1441 SAVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVR 1500
AV + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL+QN +R
Sbjct: 1441 CAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLR 1500
Query: 1501 DSKVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSS 1560
DSKV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSS
Sbjct: 1501 DSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSS 1560
Query: 1561 SPFPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTN 1620
SPFPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T
Sbjct: 1561 SPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATR 1620
Query: 1621 ELSSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
ELSS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 ELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Sed0022815 vs. NCBI nr
Match:
XP_023554171.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2521.9 bits (6535), Expect = 0.0e+00
Identity = 1305/1668 (78.24%), Postives = 1429/1668 (85.67%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI+DD+ YRD S F GS ERI R E+EAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSGSVGTRLREQEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEF--KAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAE 180
WKNFGSETSE EF K IGT IRNRN + DMIQFETPQLDAFLENAFLFE+EEVQIL
Sbjct: 121 SWKNFGSETSEMEFIKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEKEEVQILTG 180
Query: 181 FPEAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLT 240
PE +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ T
Sbjct: 181 MPEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFT 240
Query: 241 FPFLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFL 300
FPFLEVDEMVLET AF S+QDEL F+L+N+ES H IQDDNLLVN+EE L SM+ D EEFL
Sbjct: 241 FPFLEVDEMVLETLAFLSLQDELFFILENTESAHMIQDDNLLVNNEEYLSSMRCDAEEFL 300
Query: 301 LDHFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQL 360
DHFLRPCAVSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQL
Sbjct: 301 SDHFLRPCAVSELASPDISGGLSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQL 360
Query: 361 LDIYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPL 420
LD YSNQ F DLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDDTFKSLPVP+
Sbjct: 361 LDTYSNQHFGVILDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPI 420
Query: 421 LSSEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEIN 480
LSS+ SE+P+ AFIEDVLANLN +SLS SDGIYLDW+LL+E S S G+YSSYQN+LEEIN
Sbjct: 421 LSSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEIN 480
Query: 481 LKPVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSK 540
LKPVEFDQEPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVASSK
Sbjct: 481 LKPVEFDQEPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSK 540
Query: 541 LLNDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDI 600
LLN+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKPA RK ESVFS D
Sbjct: 541 LLNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPARVRKSESVFSEIDT 600
Query: 601 NTILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNE 660
NT LPKVP DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 NTTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNE 660
Query: 661 TELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAW 720
TELRK YLPYVAEDY+LMLSLPKQ LIDC+KKIYL GT+ YWEEK+MTLATLYA KQI W
Sbjct: 661 TELRKKYLPYVAEDYLLMLSLPKQMLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVW 720
Query: 721 YLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDIL 780
YLCFYGIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMV REITISHPALTTIQ+IL
Sbjct: 721 YLCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEIL 780
Query: 781 CSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPN 840
CS+TS S+LKVLVVAN+IFW SLKKL GS+G+SF EL++G TD+QV NAN+MVD+L N
Sbjct: 781 CSRTSISSLKVLVVANQIFWWSLKKLLGSLGISFAELNYGSLTDEQVSNANAMVDDLASN 840
Query: 841 CLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCK 900
CLLVS+ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCK
Sbjct: 841 CLLVSEEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCK 900
Query: 901 AFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPL 960
AFC+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA P+ TIEAE+ +V L
Sbjct: 901 AFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVSL 960
Query: 961 QVSVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERD 1020
+ V PVS KSQH DLVSFPEAI+IVNTQKFEKEMIV RRSSYQR+LALEK+GVQVVERD
Sbjct: 961 RAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERD 1020
Query: 1021 LSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCI 1080
L PVDLII G+CL WYDCTNI RK ST NEAS +NLCIENIATDVLTSLSFAF GC+
Sbjct: 1021 LCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLSLNLCIENIATDVLTSLSFAFRGCV 1080
Query: 1081 LVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRH 1140
LVFEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R
Sbjct: 1081 LVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRR 1140
Query: 1141 LYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDE 1200
+YPKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+
Sbjct: 1141 IYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDD 1200
Query: 1201 SVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKN 1260
+SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGG+QCI+KN
Sbjct: 1201 CISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGSQCIEKN 1260
Query: 1261 MDVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESF 1320
D S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SF
Sbjct: 1261 TDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASF 1320
Query: 1321 DASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSEN 1380
DA++SM+P K RD WIST+PEIS+EIRRHCSS+VQNQGLD +++K HN HNMNKSEN
Sbjct: 1321 DATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSSFVQNQGLDRSKKKIHNFHNMNKSEN 1380
Query: 1381 QHEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPF 1440
HEEL EV +LID+PV KD FA+MAPMNFLPSML+ E DS RKSKIQR+L +GQSDHPF
Sbjct: 1381 HHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPF 1440
Query: 1441 SAVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVR 1500
AV + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL QN +R
Sbjct: 1441 CAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNPLR 1500
Query: 1501 DSKVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSS 1560
DSKV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSS
Sbjct: 1501 DSKVSFSLSEKHTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSS 1560
Query: 1561 SPFPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTN 1620
SPFPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T
Sbjct: 1561 SPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATR 1620
Query: 1621 ELSSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
ELSS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 ELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Sed0022815 vs. NCBI nr
Match:
XP_022952237.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita moschata])
HSP 1 Score: 2516.9 bits (6522), Expect = 0.0e+00
Identity = 1299/1666 (77.97%), Postives = 1427/1666 (85.65%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEFKAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAEFP 180
WKNFGSETSE EFK IGT IRNRN + DMIQFETPQLD FLENAFLFE+EEVQIL P
Sbjct: 121 SWKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAMP 180
Query: 181 EAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLTFP 240
E +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ TFP
Sbjct: 181 EVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFP 240
Query: 241 FLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFLLD 300
FLEVDEMVLET AF S+QDEL F+L+++ES H I DDNLLVN+EE L SM+ D EEFL D
Sbjct: 241 FLEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLSD 300
Query: 301 HFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLLD 360
HFLRPC VSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQLLD
Sbjct: 301 HFLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLD 360
Query: 361 IYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLS 420
YSNQ F A FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDDTFKSLPVP+LS
Sbjct: 361 TYSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPILS 420
Query: 421 SEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLK 480
S+ SE+ + AFIEDVLANLN +SLS SDGIYLDW+LL+E S S G+YSSYQN+LEEINLK
Sbjct: 421 SQGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINLK 480
Query: 481 PVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKLL 540
PVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVASS LL
Sbjct: 481 PVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSILL 540
Query: 541 NDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDINT 600
N+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKP G RK ESVFS D NT
Sbjct: 541 NERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTNT 600
Query: 601 ILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNETE 660
LPKVP DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNETE
Sbjct: 601 TLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETE 660
Query: 661 LRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAWYL 720
LRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI WYL
Sbjct: 661 LRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYL 720
Query: 721 CFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDILCS 780
CFYGIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMV REITISHPALTTIQ+ILCS
Sbjct: 721 CFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILCS 780
Query: 781 KTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPNCL 840
+TS+S+LKVLVVAN+IFW SL+KL GS+G+SF E+++G T +QV NAN+MVD+L NCL
Sbjct: 781 RTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNCL 840
Query: 841 LVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCKAF 900
LVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCKAF
Sbjct: 841 LVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAF 900
Query: 901 CKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPLQV 960
C+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA P+ TIEAE+ +VPL+
Sbjct: 901 CEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLRA 960
Query: 961 SVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERDLS 1020
V PVS KSQ+ DLVSFPEAI+IVNTQKFEKEMIV RRSSY+R+LALEK+GVQVVERDL
Sbjct: 961 PVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDLC 1020
Query: 1021 FPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCILV 1080
PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+LV
Sbjct: 1021 LPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLV 1080
Query: 1081 FEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRHLY 1140
FEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R +Y
Sbjct: 1081 FEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIY 1140
Query: 1141 PKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDESV 1200
PKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+ +
Sbjct: 1141 PKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCI 1200
Query: 1201 SLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKNMD 1260
SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQCI+KN D
Sbjct: 1201 SLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTD 1260
Query: 1261 VFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESFDA 1320
S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SFDA
Sbjct: 1261 CLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDA 1320
Query: 1321 SISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSENQH 1380
++SM+P K RD WIST+PEIS+EIRRHCS +VQNQGLD +++K H+ HNMNKSEN H
Sbjct: 1321 TVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNKSENHH 1380
Query: 1381 EELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPFSA 1440
EEL EV +LID+PV KD FA+MAPMNFLPSML+ E DS RKSKIQR+L +GQSDHPF A
Sbjct: 1381 EELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFCA 1440
Query: 1441 VGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVRDS 1500
V + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL QN +RDS
Sbjct: 1441 VDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNHLRDS 1500
Query: 1501 KVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSSSP 1560
KV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSSSP
Sbjct: 1501 KVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSP 1560
Query: 1561 FPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNEL 1620
FPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T EL
Sbjct: 1561 FPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATREL 1620
Query: 1621 SSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
SS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 SSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of Sed0022815 vs. ExPASy Swiss-Prot
Match:
F4KG50 (Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 784.3 bits (2024), Expect = 2.8e-225
Identity = 608/1682 (36.15%), Postives = 900/1682 (53.51%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNE------PFRCLPVPHLASKPPL-STAGDLLHFDFLPEISLAIDR 60
MRTRFL+IDYF+ F LP P P + + D L F + +S+ I
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LAIDSALSKFFDDVLPRRIDDDNDYRDSRFQGSTERIRFLEEEAKCAYEDNVEGGWKNFG 120
L I++ALSKF DV+P R+ DYR S+ + + +E
Sbjct: 61 LPIEAALSKFLSDVVPDRV--SVDYRVFEIDDSSLGVYYSDE------------------ 120
Query: 121 SETSETEFKAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREE-VQILAEFPEAKFN 180
K G I ++ T +I+ ETP+LD +EN L E+ +Q +E E K N
Sbjct: 121 --------KDDGDAIADK-ATPKIIELETPELDFEMENKLLCTSEDHLQCFSEVLEIK-N 180
Query: 181 LETLNQG---LLNCPSEVKESVYAIEGITSEYLLDQKSCLVE-EDFAQDQKLLHRLTFPF 240
+G +L +++E +Y+++ I S+Y + + + E E F + Q FP
Sbjct: 181 DPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFRKIQPWFKDARFPL 240
Query: 241 LEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFL-LD 300
LEVDE+ L + S+ D++ VL+ E + +L++N +E + S D+ + L D
Sbjct: 241 LEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIGSKDYDLLDVLSTD 300
Query: 301 HFLRPCAVSEVASPDISGGSDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLLDI 360
+L S+V D D+++++EI S+A + + +PV +EEFQ+LD+
Sbjct: 301 CYLNKSGQSDVVPEDEFSEMDIVTILEI-----SNAEEFQGKVAVPV---TYEEFQILDV 360
Query: 361 YSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLSS 420
+ F+ F L+ + EI M + MNFK F+EL+V ELA DD FKSLP P+L
Sbjct: 361 DISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDDAFKSLPTPILHD 420
Query: 421 EESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLKP 480
E R + EDVL+ + +SLS S+ IYL W LLEE + + Y EEI
Sbjct: 421 YEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP-----FEEIVTFN 480
Query: 481 VEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKLLN 540
++++ E D Y ++FS+DA E + EPF GIS L S LL
Sbjct: 481 IDYNWEASEGDKWVYDFIFSEDAFCEPLVE---KCTEPF-YGISNLDEHAPVNTSHGLLE 540
Query: 541 DGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGES-VFSATDIN- 600
+ Q+ G ++ N +K +KS S +D FF++ +K ES V +A N
Sbjct: 541 NPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNLESRVEAAKTTNH 600
Query: 601 ---TILPKVPC-DGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAIL 660
+I K C G + NP T + LH V S+NI L+ K+YL ++
Sbjct: 601 KCMSIDSKASCRSGGMHPNPKTE---------EMILHSVRPSENIQALVGEFVKSYLTLV 660
Query: 661 QNETELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQ 720
++E+E ++ED + +LS+ K KLIDC++K + T ++K T A L AIKQ
Sbjct: 661 KDESE-------NLSEDKLKLLSISKGKLIDCIRKANVHKT-QLADDKTFTFALLLAIKQ 720
Query: 721 IAWYLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQ 780
+ WY+CF+GIH A++YL K+C+S +K L L S +E K + +IT SHP+L IQ
Sbjct: 721 MTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETDITRSHPSLAVIQ 780
Query: 781 DILCSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQ--VFNANSMVD 840
IL S+ + K L++A ++FW SLK+L SMGLS+ +L+ P+ + V A +
Sbjct: 781 GILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGNRPNVHEAIELGF 840
Query: 841 ELVPNCLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEK 900
+ +CL++S IS SFP FS+I+EYGG N S + S + +K + P HF+ +EL+
Sbjct: 841 LPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-FPSKLDSFPSFHFIKVELDM 900
Query: 901 CGNCKAFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAED 960
C C GV +P LK+ + VE +T LEE+LNF+P+++ E T E+E
Sbjct: 901 PSACGQLCAGVTVPY--SLKMIKGDEVETKTGWLEEVLNFVPLEKVCYAGSSETTNESEF 960
Query: 961 LKVPLQVSVGPVSGKSQHI--DLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDG 1020
+ +P + S + + I +S ++++VNT+ +KEMI+SRRS+YQ++LA+EK+G
Sbjct: 961 ISMPQE------SERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTYQKVLAMEKEG 1020
Query: 1021 VQVVERDLSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLS 1080
VQVVERD PVDL+++ +CL+WYD + +K++ SS I +IAT+VLTSLS
Sbjct: 1021 VQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGDIATNVLTSLS 1080
Query: 1081 FAFSGCILVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENV 1140
F+FS CI+VFEGE ++L+ VM+SSD LYAAA SL I Q+FCS S+ LTDEIIL CI++
Sbjct: 1081 FSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTDEIILKCIKSS 1140
Query: 1141 SKSMNRHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVK 1200
K H+ KM ESE+LAESFLT FPS+NPLTA ILSS L +F++ PH+ ++ +
Sbjct: 1141 VKLSKLHV--KMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKLPHKSKVERTQ 1200
Query: 1201 KYCIPDESVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGG 1260
KY +P+ESV LFS +C+YG REDS+SVMTD SSSVSSGPDSD + + +S K++ +
Sbjct: 1201 KYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHSGSKKKQYIAE 1260
Query: 1261 TQCIDKNMDVFNSDAPNPFSAGSRETLSASKSL-GSQMFEDQEI--------FSGLKGLS 1320
ID MD +P+ A ++ S L S +D EI FS
Sbjct: 1261 KDEID--MDDLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEIFHFDPVTEFSDAPFKP 1320
Query: 1321 SSVNHFFDQ--NHNLESFDASISMNPNSFGKSRDSWISTSPEISNEIR-------RHCSS 1380
S ++H D + + E FD P S K W P+ S E S
Sbjct: 1321 SGISHPNDSWPSKDPERFDK--KSGPGSSSKD-TFWEKDQPDFSVEDSLPGIPELEDWSF 1380
Query: 1381 YVQNQGLDSNR------RKRHNLHNMNKSENQHEELTGEVVSLIDDPVFKDDFASMAPMN 1440
V+++ + NR + NLH+ SEN + GEV+ D + +D S
Sbjct: 1381 PVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKGEVIDRADKYLEEDFPPSPGYNR 1440
Query: 1441 FLPSMLDY-EKDSPRKSKIQRKL-YHGQSDHPFSAVGMANNSSSDFWSPMNFHRQNSGGL 1500
F + D E++ PRKSK RKL + G F ++SS + + + N+ L
Sbjct: 1441 FARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAADIDSSSERYATEKDSKYDNNTSL 1500
Query: 1501 DNHFPDPSFQPRYKDDHSDEGLMQNSVRDSKVLFSLSEKGMSHSDVTPLSIALRSKHLQE 1560
+ ++ + + +E L + S + L E +SH +PLS A+RS + +
Sbjct: 1501 RGY--ADNYPAKRQRTLLEEVLTRRSAVPTTELPFREE--ISHFGGSPLSNAIRSSNQVQ 1560
Query: 1561 SSPWTMEFLNRIKEKSRNR--LHSVPCGSSSPFPEHLGNVRK-TVKRRSPSILEFFKYQG 1620
SSPWT++FLNR++E+SR R S+P +S P E GN++K KR+SPSILEFFKY+G
Sbjct: 1561 SSPWTVDFLNRVRERSRARKQQQSLPSYASPPSLETPGNIKKANTKRKSPSILEFFKYKG 1593
Query: 1621 GSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNELSSWTPIDKRSRQTLSFAIDGNERQTKL 1631
G+ K E+KRQK+S SS S KN + L S TPIDKR++Q+LS+ +G QTKL
Sbjct: 1621 GN---KLQEEKRQKRSKNSSASPKNERF-YSPLKSCTPIDKRAKQSLSYTANGT-GQTKL 1593
BLAST of Sed0022815 vs. ExPASy Swiss-Prot
Match:
B9F1C0 (Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 494.6 bits (1272), Expect = 4.4e-138
Identity = 523/1813 (28.85%), Postives = 818/1813 (45.12%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNE------------PFRCLPVPHLASKP---PLSTAGDLLHFDFLP 60
MRTRFL DYFA + F LPVP L P P ++A D LP
Sbjct: 1 MRTRFLATDYFAPSSSSAAGKALALEFFSFPSLPVPALPPDPHFLPFTSA------DELP 60
Query: 61 EISLAIDRLA---IDSALSKFFDDVLPRRID-----------DDNDYRDSRFQ---GSTE 120
++A D L I SALS F V+P+ + DD Y + S E
Sbjct: 61 AATVADDGLGPLPIASALSDFLAAVIPQALPVPTVPAADEVLDDFLYDRGGYGEDFSSWE 120
Query: 121 RIRFLEEEAKCAYEDNVEGGWKNFGSETSETEFKAIGTVIRN----RNLTYDMIQFETPQ 180
F +A Y V K+ E S ++ I +V++ + L ++++ E
Sbjct: 121 FGAFRIPKASEGY--GVINREKDEKGEGSRSDGLEISSVMKRWEQLKELRFEVV--EVDL 180
Query: 181 LDAFLENAFLFEREE----VQILAEFPEAKFNLETLN---QGLLNCPSEVKESVYAIEGI 240
L A E+ F EE V +L P+ K +L+ ++ + S++ ESVY +E +
Sbjct: 181 LMALQEDIASFGEEESGGGVTLLLRVPDMKIHLDFIDIETDIKIRYQSDLPESVYQVEKV 240
Query: 241 -TSEYLLDQKSCLVEEDFAQDQKLLHRLTFPFLEV-------DEMVLETSAFFSMQDELC 300
+ + S L E+ + L H P LEV D+ + ET + + D +
Sbjct: 241 PVKDNDGNGHSSLREDCCLEIAALDHGAVIPRLEVSRNSWELDDCLTETDR-YGVFDNVV 300
Query: 301 FVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFLLDHFLRPCAVSEVASPDISGGSDL 360
LD ++ HS+ E L S D+ F+ + PC +V P +
Sbjct: 301 RHLDEAQIQHSV------FKSTEFLRSTDMDMLTFVCED--APCHDIQVDKPAEIKAAVE 360
Query: 361 MSLM----EILEIPVSSAVQTKPS---CDLPVGLAIFEEFQLLDIYSNQPFEAFFDLELS 420
M ++ IL S+ KP DLP + + EE Q++D S+ F+ E +
Sbjct: 361 MDVVRINGNILLEKNSALYPLKPDGTCSDLPCSI-LLEEVQIIDFPSDNVFKMLVQSETN 420
Query: 421 AVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLSSEESERPMFAFIEDVL 480
++ + + + E +V ELALVDDTF+SLP P+L+ + + R I+++L
Sbjct: 421 KMNISDEIFKDDFDPARRLYESMVSCELALVDDTFRSLPTPILNDDIAVRSRVPPIQEIL 480
Query: 481 ANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLKPVEFD-QEPCGYDSIF 540
+L LS SDGIYLDW+LL E C+ I SY +++EE + + Q C S+F
Sbjct: 481 CSLKPHPLSASDGIYLDWHLLLEGPCNREICCSYASMVEEAKTCHLSSELQRSCQSTSVF 540
Query: 541 YRYVFSDDALDRERTEDKGELKEPF-PDGISMLPSQTIDVASSKLLNDGCQQLG---RQN 600
F +D + +D+ + + + P +S P + A+ K C+Q G +
Sbjct: 541 VS-DFLEDFQRSPKLQDEDKHSDIYVPAPLSHDPQKL--EATQK-----CEQEGGTRNHS 600
Query: 601 LVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDINTILPKVPCDGQL 660
+ + EK S + S D F+LN + + T+ G + NT VP +
Sbjct: 601 SMKRPSPEKSSSFPELISHSGDLNFYLNVR--SATKSG-----TNNENTSTLDVPHSEEQ 660
Query: 661 TNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNETELRKTYLPYVAE 720
+ ST + L + +H V S+ I LI +Y + LQ T R ++
Sbjct: 661 ALSLSTRAKVDKL----IEIHPVSPSNLIQGLIEQIHASYTSALQESTYWRHSFSDEQG- 720
Query: 721 DYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEK-VMTLATLYAIKQIAWYLCFYGIHPAHL 780
L + KQKL++ + G+ N+ E K M L LYA+KQ+A+YLCF+G+H AHL
Sbjct: 721 -----LGISKQKLLELITGEGSEGSYNHCEHKDKMELIVLYALKQVAYYLCFFGLHAAHL 780
Query: 781 YLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDILCSKTSSSTLKVL 840
Y+ L +SLE RL + I +A + +R++ SHP+L+ I+ IL S K+L
Sbjct: 781 YISNLTRSLENTPERLKHILWSISEAQRKSERQLFESHPSLSCIETILRSNKQIDQ-KIL 840
Query: 841 VVANEIFWGSLKKLFGSMGLSFEELSFGGPTD--QQVFNANS---MVDELV-PNCLLVSQ 900
+VA+ FW L + SM ++F E T V NS +++EL+ +C+L+
Sbjct: 841 IVADRAFWLPLGQKLASMRMTFVEFGQNPATTFVDLVNKTNSTAWVLEELLKSDCILLDN 900
Query: 901 GHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCKAFCKGV 960
+I SFPF+KF IILEYGG N SS + + K +P LHF+ ++++ K F +
Sbjct: 901 KNIPASFPFDKFGIILEYGGPNKSSTLLSLAPKLDGLPPLHFLYVKVDG----KDFPAAL 960
Query: 961 GLPQHNELKIE----------EKSLVENQTRM-LEELLNFLP------------------ 1020
H + ++ +K L E +M + + LNF+P
Sbjct: 961 VEDNHKDQDLKSTLDKVLLTLQKDLQERMNKMRIVDSLNFIPATNQLQGLQEKRSKHFAA 1020
Query: 1021 -----------------VDEKNILAPPEATIEAEDLKVPLQVSVGPV------------- 1080
+++KN + E L + +S PV
Sbjct: 1021 DATKELLPDDQPHRLQNLNKKNTFDSHNVVLADEQLHIQQTLSNKPVVNSQCVPTVEKSS 1080
Query: 1081 --SGKSQHI-----------DL-------------VSFPEAIVIVNTQKFEKEMIVSRRS 1140
S S ++ DL +S P+ +++VNT K M+VSRRS
Sbjct: 1081 STSSVSANVLKDPQENQSTTDLPSCVKNDCIMPGRLSVPDVVIVVNTGNHGKTMLVSRRS 1140
Query: 1141 SYQRLLALEKDGVQVVERDLSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCI 1200
SYQ++LALEK G+QVVERD+ PVDLI+++ +CL+WY+ T + +S + +
Sbjct: 1141 SYQQILALEKGGMQVVERDIDLPVDLILSAAVCLVWYETALFEANELTTSAETSGIKENV 1200
Query: 1201 ENIATDVLTSLSFAFSGCILVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSEL 1260
ENIAT++L S+SF+F+GCI+VFEGE +LS VM+SSD LY AAASL+++ QLF S++
Sbjct: 1201 ENIATNILMSVSFSFTGCIMVFEGEADFLSAVMDSSDSLYTAAASLDMNLQLFFSHTPRS 1260
Query: 1261 TDEIILGCIENVSKSMNRHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFL 1320
TDEIIL CI NV+ L P + ESE+LAESFLTSFPSINP++A+ +LSS L +FL
Sbjct: 1261 TDEIILNCITNVTSCYKAPL-PDIPESESLAESFLTSFPSINPVSAYMLLSSGGSLVEFL 1320
Query: 1321 EWPHERRLHAVKKYCIPDESVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNG 1380
WPHERR+ AV KY + + +SLF+ LCK+GE +S+SVMT+CSS S D +
Sbjct: 1321 SWPHERRIQAVGKYLLSPKIISLFNALCKFGELGESRSVMTECSSVDS---DISSAFLQS 1380
Query: 1381 NSKRKRRNFTGGTQCIDKNMDVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLK 1440
KRK+R+ C + SD+ N + E E+FS K
Sbjct: 1381 PRKRKQRSLQA---CAVPTNKLLFSDSLN--------------QIPGDYAEHAEVFSPSK 1440
Query: 1441 -GLSSSVNHFFDQNHNLESFDASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQ 1500
S +++ + ++ +FD S++M F S + ++H
Sbjct: 1441 LRKFSDMDNTIPELPDVFTFDESLNMRSEGF--------------SYQQKKH-----DVD 1500
Query: 1501 GLDSNRRKRHNLHNMNKSENQ-HEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEK 1560
+ N+ + N NQ + TG +V D P ++ +F PS +
Sbjct: 1501 AIPGNQVINDDFSNGLTPNNQAYNRRTGNMVDTFDLP-WQPEFGGTH-----PSKSTFHT 1560
Query: 1561 DSPRKSKIQRKLYHGQSDHPFSAVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQPR 1620
P S+ +P + N W+ +Q GL + +
Sbjct: 1561 SRPSCSRTH--------SNPVFSTAFEINDDPGEWNISGGTKQTWKGLAH---GGTVDDS 1620
Query: 1621 YKDDHSDEGLMQNSVRDSKVLFSLSEKGMSH--SDVTPLSIALRSKHLQESSPWTMEFLN 1635
Y+ D M N + + ++ M H S + + S + S W +++L
Sbjct: 1621 YRYD------MDNRYHEPR------DEIMQHPASSLAFQKLDFGSHATSQGSCWEIDYLR 1680
BLAST of Sed0022815 vs. ExPASy TrEMBL
Match:
A0A6J1I9N8 (protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2526.9 bits (6548), Expect = 0.0e+00
Identity = 1304/1666 (78.27%), Postives = 1429/1666 (85.77%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI+DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEFKAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAEFP 180
WKNFGSETSE EFK IGT IRNRN + DMIQFETPQLDAFLENAFLFE EEVQIL P
Sbjct: 121 SWKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAMP 180
Query: 181 EAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLTFP 240
E +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ TFP
Sbjct: 181 EVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFP 240
Query: 241 FLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFLLD 300
FLEVDEMVLET AF S+QDEL F+L+N+ES H IQDDNLLVN+EE L M+ D EEFL D
Sbjct: 241 FLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLSD 300
Query: 301 HFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLLD 360
HFLRPCAVSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQLLD
Sbjct: 301 HFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLD 360
Query: 361 IYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLS 420
YSNQ F FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDD FKSLPVP+LS
Sbjct: 361 TYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPILS 420
Query: 421 SEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLK 480
S+ SE+P+ AFIEDVLANLN +SLS SDGIYLDW+LL+ S S G+YSSYQN+LEEINLK
Sbjct: 421 SQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINLK 480
Query: 481 PVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKLL 540
PVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVAS KLL
Sbjct: 481 PVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKLL 540
Query: 541 NDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDINT 600
N+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKPAG RK ESVFSA D NT
Sbjct: 541 NERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTNT 600
Query: 601 ILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNETE 660
LPKV DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNETE
Sbjct: 601 TLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETE 660
Query: 661 LRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAWYL 720
LRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI WYL
Sbjct: 661 LRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYL 720
Query: 721 CFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDILCS 780
CF+GIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMVD+EITISHPALTTIQ+ILCS
Sbjct: 721 CFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILCS 780
Query: 781 KTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPNCL 840
+TS+S+LKVLVVAN+IFW SLK L GS+G+SF E+++G TD+QV NAN+MVD+L NCL
Sbjct: 781 RTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNCL 840
Query: 841 LVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCKAF 900
LVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCKAF
Sbjct: 841 LVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAF 900
Query: 901 CKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPLQV 960
C+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA + TIEAE+ +VPL+
Sbjct: 901 CEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLRA 960
Query: 961 SVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERDLS 1020
V PVS KSQH DLVSFPEAI+IVNTQKFEKEMIV RRSSYQR+LALEK+GVQVVERDL
Sbjct: 961 PVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDLC 1020
Query: 1021 FPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCILV 1080
PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+LV
Sbjct: 1021 LPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLV 1080
Query: 1081 FEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRHLY 1140
FEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R +Y
Sbjct: 1081 FEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIY 1140
Query: 1141 PKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDESV 1200
PKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+ +
Sbjct: 1141 PKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCI 1200
Query: 1201 SLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKNMD 1260
SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQCI+KN D
Sbjct: 1201 SLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTD 1260
Query: 1261 VFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESFDA 1320
S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SFDA
Sbjct: 1261 CLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDA 1320
Query: 1321 SISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSENQH 1380
++SM+P K RD WIST+PEIS+EIRR CSS+VQNQGLD +++K HN HNMNKSEN H
Sbjct: 1321 TVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENHH 1380
Query: 1381 EELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPFSA 1440
EEL EV +LID+PV KD FA+MAPMNFLPSMLD E DS RKSKIQR+L +GQSDHPF A
Sbjct: 1381 EELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFCA 1440
Query: 1441 VGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVRDS 1500
V + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL+QN +RDS
Sbjct: 1441 VDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRDS 1500
Query: 1501 KVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSSSP 1560
KV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSSSP
Sbjct: 1501 KVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSP 1560
Query: 1561 FPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNEL 1620
FPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T EL
Sbjct: 1561 FPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATREL 1620
Query: 1621 SSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
SS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 SSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of Sed0022815 vs. ExPASy TrEMBL
Match:
A0A6J1I842 (protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2521.9 bits (6535), Expect = 0.0e+00
Identity = 1304/1668 (78.18%), Postives = 1429/1668 (85.67%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI+DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEF--KAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAE 180
WKNFGSETSE EF K IGT IRNRN + DMIQFETPQLDAFLENAFLFE EEVQIL
Sbjct: 121 SWKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTA 180
Query: 181 FPEAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLT 240
PE +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ T
Sbjct: 181 MPEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFT 240
Query: 241 FPFLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFL 300
FPFLEVDEMVLET AF S+QDEL F+L+N+ES H IQDDNLLVN+EE L M+ D EEFL
Sbjct: 241 FPFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFL 300
Query: 301 LDHFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQL 360
DHFLRPCAVSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQL
Sbjct: 301 SDHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQL 360
Query: 361 LDIYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPL 420
LD YSNQ F FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDD FKSLPVP+
Sbjct: 361 LDTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPI 420
Query: 421 LSSEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEIN 480
LSS+ SE+P+ AFIEDVLANLN +SLS SDGIYLDW+LL+ S S G+YSSYQN+LEEIN
Sbjct: 421 LSSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEIN 480
Query: 481 LKPVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSK 540
LKPVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVAS K
Sbjct: 481 LKPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRK 540
Query: 541 LLNDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDI 600
LLN+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKPAG RK ESVFSA D
Sbjct: 541 LLNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDT 600
Query: 601 NTILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNE 660
NT LPKV DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 NTTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNE 660
Query: 661 TELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAW 720
TELRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI W
Sbjct: 661 TELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVW 720
Query: 721 YLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDIL 780
YLCF+GIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMVD+EITISHPALTTIQ+IL
Sbjct: 721 YLCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEIL 780
Query: 781 CSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPN 840
CS+TS+S+LKVLVVAN+IFW SLK L GS+G+SF E+++G TD+QV NAN+MVD+L N
Sbjct: 781 CSRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASN 840
Query: 841 CLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCK 900
CLLVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCK
Sbjct: 841 CLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCK 900
Query: 901 AFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPL 960
AFC+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA + TIEAE+ +VPL
Sbjct: 901 AFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPL 960
Query: 961 QVSVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERD 1020
+ V PVS KSQH DLVSFPEAI+IVNTQKFEKEMIV RRSSYQR+LALEK+GVQVVERD
Sbjct: 961 RAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERD 1020
Query: 1021 LSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCI 1080
L PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+
Sbjct: 1021 LCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCV 1080
Query: 1081 LVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRH 1140
LVFEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R
Sbjct: 1081 LVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRR 1140
Query: 1141 LYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDE 1200
+YPKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+
Sbjct: 1141 IYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDD 1200
Query: 1201 SVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKN 1260
+SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQCI+KN
Sbjct: 1201 CISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKN 1260
Query: 1261 MDVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESF 1320
D S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SF
Sbjct: 1261 TDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASF 1320
Query: 1321 DASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSEN 1380
DA++SM+P K RD WIST+PEIS+EIRR CSS+VQNQGLD +++K HN HNMNKSEN
Sbjct: 1321 DATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSEN 1380
Query: 1381 QHEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPF 1440
HEEL EV +LID+PV KD FA+MAPMNFLPSMLD E DS RKSKIQR+L +GQSDHPF
Sbjct: 1381 HHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPF 1440
Query: 1441 SAVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVR 1500
AV + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL+QN +R
Sbjct: 1441 CAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLR 1500
Query: 1501 DSKVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSS 1560
DSKV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSS
Sbjct: 1501 DSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSS 1560
Query: 1561 SPFPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTN 1620
SPFPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T
Sbjct: 1561 SPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATR 1620
Query: 1621 ELSSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
ELSS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 ELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Sed0022815 vs. ExPASy TrEMBL
Match:
A0A6J1GJU9 (protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454972 PE=4 SV=1)
HSP 1 Score: 2516.9 bits (6522), Expect = 0.0e+00
Identity = 1299/1666 (77.97%), Postives = 1427/1666 (85.65%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEFKAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAEFP 180
WKNFGSETSE EFK IGT IRNRN + DMIQFETPQLD FLENAFLFE+EEVQIL P
Sbjct: 121 SWKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAMP 180
Query: 181 EAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLTFP 240
E +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ TFP
Sbjct: 181 EVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFP 240
Query: 241 FLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFLLD 300
FLEVDEMVLET AF S+QDEL F+L+++ES H I DDNLLVN+EE L SM+ D EEFL D
Sbjct: 241 FLEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLSD 300
Query: 301 HFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLLD 360
HFLRPC VSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQLLD
Sbjct: 301 HFLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLD 360
Query: 361 IYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLS 420
YSNQ F A FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDDTFKSLPVP+LS
Sbjct: 361 TYSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPILS 420
Query: 421 SEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLK 480
S+ SE+ + AFIEDVLANLN +SLS SDGIYLDW+LL+E S S G+YSSYQN+LEEINLK
Sbjct: 421 SQGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINLK 480
Query: 481 PVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKLL 540
PVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVASS LL
Sbjct: 481 PVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSILL 540
Query: 541 NDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDINT 600
N+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKP G RK ESVFS D NT
Sbjct: 541 NERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTNT 600
Query: 601 ILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNETE 660
LPKVP DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNETE
Sbjct: 601 TLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETE 660
Query: 661 LRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAWYL 720
LRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI WYL
Sbjct: 661 LRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYL 720
Query: 721 CFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDILCS 780
CFYGIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMV REITISHPALTTIQ+ILCS
Sbjct: 721 CFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILCS 780
Query: 781 KTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPNCL 840
+TS+S+LKVLVVAN+IFW SL+KL GS+G+SF E+++G T +QV NAN+MVD+L NCL
Sbjct: 781 RTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNCL 840
Query: 841 LVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCKAF 900
LVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCKAF
Sbjct: 841 LVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAF 900
Query: 901 CKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPLQV 960
C+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA P+ TIEAE+ +VPL+
Sbjct: 901 CEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLRA 960
Query: 961 SVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERDLS 1020
V PVS KSQ+ DLVSFPEAI+IVNTQKFEKEMIV RRSSY+R+LALEK+GVQVVERDL
Sbjct: 961 PVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDLC 1020
Query: 1021 FPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCILV 1080
PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+LV
Sbjct: 1021 LPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLV 1080
Query: 1081 FEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRHLY 1140
FEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R +Y
Sbjct: 1081 FEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIY 1140
Query: 1141 PKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDESV 1200
PKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+ +
Sbjct: 1141 PKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCI 1200
Query: 1201 SLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKNMD 1260
SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQCI+KN D
Sbjct: 1201 SLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTD 1260
Query: 1261 VFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESFDA 1320
S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SFDA
Sbjct: 1261 CLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDA 1320
Query: 1321 SISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSENQH 1380
++SM+P K RD WIST+PEIS+EIRRHCS +VQNQGLD +++K H+ HNMNKSEN H
Sbjct: 1321 TVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNKSENHH 1380
Query: 1381 EELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPFSA 1440
EEL EV +LID+PV KD FA+MAPMNFLPSML+ E DS RKSKIQR+L +GQSDHPF A
Sbjct: 1381 EELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFCA 1440
Query: 1441 VGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVRDS 1500
V + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL QN +RDS
Sbjct: 1441 VDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNHLRDS 1500
Query: 1501 KVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSSSP 1560
KV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSSSP
Sbjct: 1501 KVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSP 1560
Query: 1561 FPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNEL 1620
FPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T EL
Sbjct: 1561 FPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATREL 1620
Query: 1621 SSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
SS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 SSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of Sed0022815 vs. ExPASy TrEMBL
Match:
A0A6J1I320 (protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2516.1 bits (6520), Expect = 0.0e+00
Identity = 1304/1672 (77.99%), Postives = 1429/1672 (85.47%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI+DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEF--KAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAE 180
WKNFGSETSE EF K IGT IRNRN + DMIQFETPQLDAFLENAFLFE EEVQIL
Sbjct: 121 SWKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTA 180
Query: 181 FPEAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLT 240
PE +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ T
Sbjct: 181 MPEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFT 240
Query: 241 FPFLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFL 300
FPFLEVDEMVLET AF S+QDEL F+L+N+ES H IQDDNLLVN+EE L M+ D EEFL
Sbjct: 241 FPFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFL 300
Query: 301 LDHFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQL 360
DHFLRPCAVSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQL
Sbjct: 301 SDHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQL 360
Query: 361 LDIYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPL 420
LD YSNQ F FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDD FKSLPVP+
Sbjct: 361 LDTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPI 420
Query: 421 LSSEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEIN 480
LSS+ SE+P+ AFIEDVLANLN +SLS SDGIYLDW+LL+ S S G+YSSYQN+LEEIN
Sbjct: 421 LSSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEIN 480
Query: 481 LKPVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSK 540
LKPVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVAS K
Sbjct: 481 LKPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRK 540
Query: 541 LLNDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDI 600
LLN+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKPAG RK ESVFSA D
Sbjct: 541 LLNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDT 600
Query: 601 NTILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNE 660
NT LPKV DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 NTTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNE 660
Query: 661 TELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAW 720
TELRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI W
Sbjct: 661 TELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVW 720
Query: 721 YLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDIL 780
YLCF+GIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMVD+EITISHPALTTIQ+IL
Sbjct: 721 YLCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEIL 780
Query: 781 CSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPN 840
CS+TS+S+LKVLVVAN+IFW SLK L GS+G+SF E+++G TD+QV NAN+MVD+L N
Sbjct: 781 CSRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASN 840
Query: 841 CLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCK 900
CLLVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCK
Sbjct: 841 CLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCK 900
Query: 901 AFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPL 960
AFC+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA + TIEAE+ +VPL
Sbjct: 901 AFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPL 960
Query: 961 QVSVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERD 1020
+ V PVS KSQH DLVSFPEAI+IVNTQKFEKEMIV RRSSYQR+LALEK+GVQVVERD
Sbjct: 961 RAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERD 1020
Query: 1021 LSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCI 1080
L PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+
Sbjct: 1021 LCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCV 1080
Query: 1081 L----VFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKS 1140
L VFEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK
Sbjct: 1081 LISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL 1140
Query: 1141 MNRHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYC 1200
M R +YPKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY
Sbjct: 1141 MTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYS 1200
Query: 1201 IPDESVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQC 1260
IPD+ +SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQC
Sbjct: 1201 IPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQC 1260
Query: 1261 IDKNMDVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHN 1320
I+KN D S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHN
Sbjct: 1261 IEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHN 1320
Query: 1321 LESFDASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMN 1380
L SFDA++SM+P K RD WIST+PEIS+EIRR CSS+VQNQGLD +++K HN HNMN
Sbjct: 1321 LASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMN 1380
Query: 1381 KSENQHEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQS 1440
KSEN HEEL EV +LID+PV KD FA+MAPMNFLPSMLD E DS RKSKIQR+L +GQS
Sbjct: 1381 KSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQS 1440
Query: 1441 DHPFSAVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQ 1500
DHPF AV + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL+Q
Sbjct: 1441 DHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQ 1500
Query: 1501 NSVRDSKVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVP 1560
N +RDSKV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP
Sbjct: 1501 NPLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVP 1560
Query: 1561 CGSSSPFPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVL 1620
GSSSPFPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL
Sbjct: 1561 RGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVL 1620
Query: 1621 VPTNELSSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
V T ELSS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 VATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1671
BLAST of Sed0022815 vs. ExPASy TrEMBL
Match:
A0A6J1GJP5 (protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454972 PE=4 SV=1)
HSP 1 Score: 2511.9 bits (6509), Expect = 0.0e+00
Identity = 1299/1668 (77.88%), Postives = 1427/1668 (85.55%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNEPFRCLPVPHLASKPPLSTAGDLLHFDFLPEISLAIDRLAIDSAL 60
MRTRFL+ID+FA GNE F LPVPHL S PLST GDLLHFDFLPEISL ID L+IDSA+
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSN-PLSTVGDLLHFDFLPEISLGIDSLSIDSAI 60
Query: 61 SKFFDDVLPRRIDDDNDYRD-----SRFQGSTERI--------RFLEEEAKCAYEDNVEG 120
S+FFDDVLPRRI DD+ YRD S F GS ERI R EEEAK YEDN+EG
Sbjct: 61 SRFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEG 120
Query: 121 GWKNFGSETSETEF--KAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREEVQILAE 180
WKNFGSETSE EF K IGT IRNRN + DMIQFETPQLD FLENAFLFE+EEVQIL
Sbjct: 121 SWKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTA 180
Query: 181 FPEAKFNLETLNQGLLNCPSEVKESVYAIEGITSEYLLDQKSCLVEEDFAQDQKLLHRLT 240
PE +F+LETLNQGLL PSEVKES+Y +E I SEYLLDQ+SCL E+DFAQDQKL H+ T
Sbjct: 181 MPEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFT 240
Query: 241 FPFLEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFL 300
FPFLEVDEMVLET AF S+QDEL F+L+++ES H I DDNLLVN+EE L SM+ D EEFL
Sbjct: 241 FPFLEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFL 300
Query: 301 LDHFLRPCAVSEVASPDISGG-SDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQL 360
DHFLRPC VSE+ASPDISGG SDLMS+ME LEI VSS VQTK SCDL V AIFEEFQL
Sbjct: 301 SDHFLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQL 360
Query: 361 LDIYSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPL 420
LD YSNQ F A FDLE+SA+SEI+DC SIEN NFKSFNELIVCHEL LVDDTFKSLPVP+
Sbjct: 361 LDTYSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPI 420
Query: 421 LSSEESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEIN 480
LSS+ SE+ + AFIEDVLANLN +SLS SDGIYLDW+LL+E S S G+YSSYQN+LEEIN
Sbjct: 421 LSSQGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEIN 480
Query: 481 LKPVEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSK 540
LKPVEFD+EPC D IFYRYVFSDDAL RERTEDKGELKE FP+GI ML QTIDVASS
Sbjct: 481 LKPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSI 540
Query: 541 LLNDGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGESVFSATDI 600
LLN+ CQQ RQ L AVGN+EK LSSWKS+SE ND KFFLNSQKP G RK ESVFS D
Sbjct: 541 LLNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDT 600
Query: 601 NTILPKVPCDGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAILQNE 660
NT LPKVP DG LTN PS +SAD SLKQLNV +HQVCLSDNILHLINNSEKTYLAILQNE
Sbjct: 601 NTTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNE 660
Query: 661 TELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQIAW 720
TELRK YLPYVAEDY+LMLSLPKQKLIDC+KKIYL GT+ YWEEK+MTLATLYA KQI W
Sbjct: 661 TELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVW 720
Query: 721 YLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQDIL 780
YLCFYGIHPAHLYLKKLCQS ECLKSRLGFL S IE+A KMV REITISHPALTTIQ+IL
Sbjct: 721 YLCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEIL 780
Query: 781 CSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQVFNANSMVDELVPN 840
CS+TS+S+LKVLVVAN+IFW SL+KL GS+G+SF E+++G T +QV NAN+MVD+L N
Sbjct: 781 CSRTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASN 840
Query: 841 CLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEKCGNCK 900
CLLVSQ +ISGSFPFNKFSI+LEYGG+NGSSQIS YF+ I+MPHLHF+MLEL+KCGNCK
Sbjct: 841 CLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCK 900
Query: 901 AFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAEDLKVPL 960
AFC+GV PQHNEL IEEKSLVENQT MLE+LLNFLPV+EK ILA P+ TIEAE+ +VPL
Sbjct: 901 AFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPL 960
Query: 961 QVSVGPVSGKSQHIDLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDGVQVVERD 1020
+ V PVS KSQ+ DLVSFPEAI+IVNTQKFEKEMIV RRSSY+R+LALEK+GVQVVERD
Sbjct: 961 RAPVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERD 1020
Query: 1021 LSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLSFAFSGCI 1080
L PVDLII G+CL WYDCTNI RK ST NEAS C+NLCIENIATDVLTSLSFAF GC+
Sbjct: 1021 LCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCV 1080
Query: 1081 LVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKSMNRH 1140
LVFEGEIS LSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK M R
Sbjct: 1081 LVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRR 1140
Query: 1141 LYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVKKYCIPDE 1200
+YPKMSESETLAESFLTSFPSINPL AHGILSSES L DFLEWPHERRLHA++KY IPD+
Sbjct: 1141 IYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDD 1200
Query: 1201 SVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGGTQCIDKN 1260
+SLFS LCKYGEREDSKSVMTDCSSS+SSG DS+KC+FNGNS+RKRRNFTGGTQCI+KN
Sbjct: 1201 CISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKN 1260
Query: 1261 MDVFNSDAPNPFSAGSRETLSASKSLGSQMFEDQEIFSGLKGLSSSVNHFFDQNHNLESF 1320
D S+ NPF+AG+ ETL ASKS GSQ+FED EIF LKGLSSSVN+FFDQNHNL SF
Sbjct: 1261 TDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASF 1320
Query: 1321 DASISMNPNSFGKSRDSWISTSPEISNEIRRHCSSYVQNQGLDSNRRKRHNLHNMNKSEN 1380
DA++SM+P K RD WIST+PEIS+EIRRHCS +VQNQGLD +++K H+ HNMNKSEN
Sbjct: 1321 DATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNKSEN 1380
Query: 1381 QHEELTGEVVSLIDDPVFKDDFASMAPMNFLPSMLDYEKDSPRKSKIQRKLYHGQSDHPF 1440
HEEL EV +LID+PV KD FA+MAPMNFLPSML+ E DS RKSKIQR+L +GQSDHPF
Sbjct: 1381 HHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPF 1440
Query: 1441 SAVGMANNSSSDFWSPMNFHRQNSGGLDNHFPDPSFQP-----RYKDDHSDEGLMQNSVR 1500
AV + NNSSSDFWS +N H Q+S GLDN FPDPSF+P RYKDDH DEGL QN +R
Sbjct: 1441 CAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNHLR 1500
Query: 1501 DSKVLFSLSEKGMSHSDVTPLSIALRSKHLQESSPWTMEFLNRIKEKSRNRLHSVPCGSS 1560
DSKV FSLSEK SHSDVTPLS+ALRSKHLQESSPWTMEFLNRI+EKSRNR HSVP GSS
Sbjct: 1501 DSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSS 1560
Query: 1561 SPFPEHLGNVRKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLVPTN 1620
SPFPE+LGNV+KTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVLV T
Sbjct: 1561 SPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATR 1620
Query: 1621 ELSSWTPIDKRSRQTLSFAIDGNERQTKLVWSNDNYGLGQSSQKLTNK 1648
ELSS TPIDKRSRQTLS+A DGN QTKLVWSNDNYGLG++SQKL NK
Sbjct: 1621 ELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of Sed0022815 vs. TAIR 10
Match:
AT5G52290.1 (shortage in chiasmata 1 )
HSP 1 Score: 784.3 bits (2024), Expect = 2.0e-226
Identity = 608/1682 (36.15%), Postives = 900/1682 (53.51%), Query Frame = 0
Query: 1 MRTRFLDIDYFAAGNE------PFRCLPVPHLASKPPL-STAGDLLHFDFLPEISLAIDR 60
MRTRFL+IDYF+ F LP P P + + D L F + +S+ I
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LAIDSALSKFFDDVLPRRIDDDNDYRDSRFQGSTERIRFLEEEAKCAYEDNVEGGWKNFG 120
L I++ALSKF DV+P R+ DYR S+ + + +E
Sbjct: 61 LPIEAALSKFLSDVVPDRV--SVDYRVFEIDDSSLGVYYSDE------------------ 120
Query: 121 SETSETEFKAIGTVIRNRNLTYDMIQFETPQLDAFLENAFLFEREE-VQILAEFPEAKFN 180
K G I ++ T +I+ ETP+LD +EN L E+ +Q +E E K N
Sbjct: 121 --------KDDGDAIADK-ATPKIIELETPELDFEMENKLLCTSEDHLQCFSEVLEIK-N 180
Query: 181 LETLNQG---LLNCPSEVKESVYAIEGITSEYLLDQKSCLVE-EDFAQDQKLLHRLTFPF 240
+G +L +++E +Y+++ I S+Y + + + E E F + Q FP
Sbjct: 181 DPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFRKIQPWFKDARFPL 240
Query: 241 LEVDEMVLETSAFFSMQDELCFVLDNSESPHSIQDDNLLVNDEENLCSMKSDIEEFL-LD 300
LEVDE+ L + S+ D++ VL+ E + +L++N +E + S D+ + L D
Sbjct: 241 LEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIGSKDYDLLDVLSTD 300
Query: 301 HFLRPCAVSEVASPDISGGSDLMSLMEILEIPVSSAVQTKPSCDLPVGLAIFEEFQLLDI 360
+L S+V D D+++++EI S+A + + +PV +EEFQ+LD+
Sbjct: 301 CYLNKSGQSDVVPEDEFSEMDIVTILEI-----SNAEEFQGKVAVPV---TYEEFQILDV 360
Query: 361 YSNQPFEAFFDLELSAVSEISDCMSIENMNFKSFNELIVCHELALVDDTFKSLPVPLLSS 420
+ F+ F L+ + EI M + MNFK F+EL+V ELA DD FKSLP P+L
Sbjct: 361 DISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDDAFKSLPTPILHD 420
Query: 421 EESERPMFAFIEDVLANLNGKSLSTSDGIYLDWYLLEEDSCSFGIYSSYQNLLEEINLKP 480
E R + EDVL+ + +SLS S+ IYL W LLEE + + Y EEI
Sbjct: 421 YEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP-----FEEIVTFN 480
Query: 481 VEFDQEPCGYDSIFYRYVFSDDALDRERTEDKGELKEPFPDGISMLPSQTIDVASSKLLN 540
++++ E D Y ++FS+DA E + EPF GIS L S LL
Sbjct: 481 IDYNWEASEGDKWVYDFIFSEDAFCEPLVE---KCTEPF-YGISNLDEHAPVNTSHGLLE 540
Query: 541 DGCQQLGRQNLVAVGNTEKVLSSWKSQSELNDPKFFLNSQKPAGTRKGES-VFSATDIN- 600
+ Q+ G ++ N +K +KS S +D FF++ +K ES V +A N
Sbjct: 541 NPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNLESRVEAAKTTNH 600
Query: 601 ---TILPKVPC-DGQLTNNPSTTSADVSLKQLNVTLHQVCLSDNILHLINNSEKTYLAIL 660
+I K C G + NP T + LH V S+NI L+ K+YL ++
Sbjct: 601 KCMSIDSKASCRSGGMHPNPKTE---------EMILHSVRPSENIQALVGEFVKSYLTLV 660
Query: 661 QNETELRKTYLPYVAEDYVLMLSLPKQKLIDCVKKIYLLGTSNYWEEKVMTLATLYAIKQ 720
++E+E ++ED + +LS+ K KLIDC++K + T ++K T A L AIKQ
Sbjct: 661 KDESE-------NLSEDKLKLLSISKGKLIDCIRKANVHKT-QLADDKTFTFALLLAIKQ 720
Query: 721 IAWYLCFYGIHPAHLYLKKLCQSLECLKSRLGFLASLIEDASKMVDREITISHPALTTIQ 780
+ WY+CF+GIH A++YL K+C+S +K L L S +E K + +IT SHP+L IQ
Sbjct: 721 MTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETDITRSHPSLAVIQ 780
Query: 781 DILCSKTSSSTLKVLVVANEIFWGSLKKLFGSMGLSFEELSFGGPTDQQ--VFNANSMVD 840
IL S+ + K L++A ++FW SLK+L SMGLS+ +L+ P+ + V A +
Sbjct: 781 GILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGNRPNVHEAIELGF 840
Query: 841 ELVPNCLLVSQGHISGSFPFNKFSIILEYGGINGSSQISTYFTKSINMPHLHFVMLELEK 900
+ +CL++S IS SFP FS+I+EYGG N S + S + +K + P HF+ +EL+
Sbjct: 841 LPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-FPSKLDSFPSFHFIKVELDM 900
Query: 901 CGNCKAFCKGVGLPQHNELKIEEKSLVENQTRMLEELLNFLPVDEKNILAPPEATIEAED 960
C C GV +P LK+ + VE +T LEE+LNF+P+++ E T E+E
Sbjct: 901 PSACGQLCAGVTVPY--SLKMIKGDEVETKTGWLEEVLNFVPLEKVCYAGSSETTNESEF 960
Query: 961 LKVPLQVSVGPVSGKSQHI--DLVSFPEAIVIVNTQKFEKEMIVSRRSSYQRLLALEKDG 1020
+ +P + S + + I +S ++++VNT+ +KEMI+SRRS+YQ++LA+EK+G
Sbjct: 961 ISMPQE------SERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTYQKVLAMEKEG 1020
Query: 1021 VQVVERDLSFPVDLIITSGLCLMWYDCTNIHRKASTPNEASSCMNLCIENIATDVLTSLS 1080
VQVVERD PVDL+++ +CL+WYD + +K++ SS I +IAT+VLTSLS
Sbjct: 1021 VQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGDIATNVLTSLS 1080
Query: 1081 FAFSGCILVFEGEISYLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENV 1140
F+FS CI+VFEGE ++L+ VM+SSD LYAAA SL I Q+FCS S+ LTDEIIL CI++
Sbjct: 1081 FSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTDEIILKCIKSS 1140
Query: 1141 SKSMNRHLYPKMSESETLAESFLTSFPSINPLTAHGILSSESFLCDFLEWPHERRLHAVK 1200
K H+ KM ESE+LAESFLT FPS+NPLTA ILSS L +F++ PH+ ++ +
Sbjct: 1141 VKLSKLHV--KMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKLPHKSKVERTQ 1200
Query: 1201 KYCIPDESVSLFSVLCKYGEREDSKSVMTDCSSSVSSGPDSDKCYFNGNSKRKRRNFTGG 1260
KY +P+ESV LFS +C+YG REDS+SVMTD SSSVSSGPDSD + + +S K++ +
Sbjct: 1201 KYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHSGSKKKQYIAE 1260
Query: 1261 TQCIDKNMDVFNSDAPNPFSAGSRETLSASKSL-GSQMFEDQEI--------FSGLKGLS 1320
ID MD +P+ A ++ S L S +D EI FS
Sbjct: 1261 KDEID--MDDLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEIFHFDPVTEFSDAPFKP 1320
Query: 1321 SSVNHFFDQ--NHNLESFDASISMNPNSFGKSRDSWISTSPEISNEIR-------RHCSS 1380
S ++H D + + E FD P S K W P+ S E S
Sbjct: 1321 SGISHPNDSWPSKDPERFDK--KSGPGSSSKD-TFWEKDQPDFSVEDSLPGIPELEDWSF 1380
Query: 1381 YVQNQGLDSNR------RKRHNLHNMNKSENQHEELTGEVVSLIDDPVFKDDFASMAPMN 1440
V+++ + NR + NLH+ SEN + GEV+ D + +D S
Sbjct: 1381 PVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKGEVIDRADKYLEEDFPPSPGYNR 1440
Query: 1441 FLPSMLDY-EKDSPRKSKIQRKL-YHGQSDHPFSAVGMANNSSSDFWSPMNFHRQNSGGL 1500
F + D E++ PRKSK RKL + G F ++SS + + + N+ L
Sbjct: 1441 FARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAADIDSSSERYATEKDSKYDNNTSL 1500
Query: 1501 DNHFPDPSFQPRYKDDHSDEGLMQNSVRDSKVLFSLSEKGMSHSDVTPLSIALRSKHLQE 1560
+ ++ + + +E L + S + L E +SH +PLS A+RS + +
Sbjct: 1501 RGY--ADNYPAKRQRTLLEEVLTRRSAVPTTELPFREE--ISHFGGSPLSNAIRSSNQVQ 1560
Query: 1561 SSPWTMEFLNRIKEKSRNR--LHSVPCGSSSPFPEHLGNVRK-TVKRRSPSILEFFKYQG 1620
SSPWT++FLNR++E+SR R S+P +S P E GN++K KR+SPSILEFFKY+G
Sbjct: 1561 SSPWTVDFLNRVRERSRARKQQQSLPSYASPPSLETPGNIKKANTKRKSPSILEFFKYKG 1593
Query: 1621 GSTQRKKPEQKRQKQSMQSSNSSKNVLVPTNELSSWTPIDKRSRQTLSFAIDGNERQTKL 1631
G+ K E+KRQK+S SS S KN + L S TPIDKR++Q+LS+ +G QTKL
Sbjct: 1621 GN---KLQEEKRQKRSKNSSASPKNERF-YSPLKSCTPIDKRAKQSLSYTANGT-GQTKL 1593
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022971834.1 | 0.0e+00 | 78.27 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima] | [more] |
XP_023554172.1 | 0.0e+00 | 78.28 | protein SHORTAGE IN CHIASMATA 1 isoform X4 [Cucurbita pepo subsp. pepo] | [more] |
XP_022971833.1 | 0.0e+00 | 78.18 | protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima] | [more] |
XP_023554171.1 | 0.0e+00 | 78.24 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita pepo subsp. pepo] | [more] |
XP_022952237.1 | 0.0e+00 | 77.97 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
F4KG50 | 2.8e-225 | 36.15 | Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV... | [more] |
B9F1C0 | 4.4e-138 | 28.85 | Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I9N8 | 0.0e+00 | 78.27 | protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1I842 | 0.0e+00 | 78.18 | protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1GJU9 | 0.0e+00 | 77.97 | protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
A0A6J1I320 | 0.0e+00 | 77.99 | protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1GJP5 | 0.0e+00 | 77.88 | protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
Match Name | E-value | Identity | Description | |
AT5G52290.1 | 2.0e-226 | 36.15 | shortage in chiasmata 1 | [more] |