Sed0022777 (gene) Chayote v1

Overview
NameSed0022777
Typegene
OrganismSechium edule (Chayote v1)
Description39S ribosomal protein L41-A, mitochondrial
LocationLG07: 5921364 .. 5925298 (-)
RNA-Seq ExpressionSed0022777
SyntenySed0022777
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGAATGCATTTTATAATACCAAACCCATTTATCTCTTTTGTTCGTTTCGTCTTCCCTCTTCCCTTTTCTAGCAGCCGTCGTTGCTGGTCGCGATCTGGCAACGGTGCATCTTCTCCGACGCCGGCGTGAACCTCAGTATCAGCCTAGCCGAAGAAATTTCAGGGTTCTGGTTTTGTTCATTTGTCTCTAACTTCGAAATGGCGTTGGGGCTGATATTAGGTCTCGCAAGAGCAATGAGGAGGAAGCGTACTTCATCTCTCGATATTCTCTCTTCGAAACGAGCTCCAAGAGATTATTACAAGGGCAAGAATTGCAAGCCCACTGGTTTTCATACGCGCAAAGGTATGAATGGCTTTCCCTTCTCCACCGATTCGAATGTTTACGAACAGTAGAAACAAATGAGAAACTTGTATGAAACTTTGTCTGATTCTATTCTGTTTATGTTGGTTAGATTGGAAAATAGATCTTAAATATCAAATCACTCGATAACCATTTCGTTTTTTGTTTTTAGTTTTTGAAATTTAAGTAATTTTTACTCGTATGCTCCATTTTTCCTACCATGTATTTAACTTTTCTCAAGAAACTAGTGAATTCTAACCAAATTTCAAACTTTTAGTAGTTTTTCTTCTTTTTTTTTTCTTTTCAAATTTTGGTTTGTTTTCAAATTTTTTCAATATCAAATCACTCCATTTTTTTTTTCAAATTTTAGTAGGTAAGATGTAGATATCCATGTAGGAGAAAATATATGGTGTGCACTTGTTGTAGGCTTAAATTTCAAAACCCAAAAACTAAAAATAAAATGATTATCAAATGAGACCTTACCTTTTTATTTTTGGATTTTGAAATTTAAGTCTACAACAGCTAGCTACCATACCATATATTTTCTTCTGCATGGATATTTAAATCTTACCTATATTTATAGAAACCAAAACAAAATTTGGAAACAAAAAAAAAGTAAGCTTCCAAAACCTTGTTTTTATTTTTGAAAGTTGGTTTGCATTCACATACTTTCTTAACGAAAGAGGATACATTGTAAGAAAAGTGGAACAGTAGGACTATGAATTTTGAGTGTAAGAATTGGCTTAAATTTCAAAAATGAAAAACAAAAAACCTAAATGGTTATCAAACTTAGGCCTGATTTAGACCAATCAGCTTTAAATTTTCTTCAATAACATTTCTATTTCACATCCATACTTGATACAAACCACTACAATAACTCCCTAACACTACCTTAAATAAGTGGGATTAGCATCGATTTCTAATGTAAGTAAAAATAACTCATTCAAATTACTTGGGGGGTTTTAACAAATGTTCGGTGAGTGTTTGTTTAGTTGATTTGATCTTTCTGTCGAAAGTCAATTATATTTTAGTGCTACGGTAATTGAGTGTGAAGACTTTGAAGGAGTTAGTGCTGTTAGATCCAACTCGATATGGTAAATTAGTGATCGACTTAAGAAGATAAATAGTGTTTCTAGGAATGTGATGTGATGTGGTTAGTAGGATGCACTATGAGTTCTAACTTCTAATTCTAGATTTTGGTATTTGTATTTTGTATGGTTCTTGAACTTTTTTTAACTGCCTTCTGTTGAGTATAATTAATGAAATGAATTATCAGACTACAAATTGCTGTTTGATAGTGTAGGCATTGTTCAAAGGTGACTTATCCGAAAATAAATGGTTCAAGGCTTCAAGGGTGTGTGGTTAAAAATTAAAATGCAATTTTTTTTGCAGGTGGATACGTTGTGGTGCCTGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGGTATTTTACCTCATCATCGTTTATAGTATAGCTTTTTTGTGATTATAATCTGCTCATTGTTTAGTGGAGATGCTTTTTGTAATATTCCGATAGGAATTCTTTTATTCCATCAATGAAAGTGTACTGTTTCCTTTTAAAAAAATCATGGTTTATAGTAAAATTTAGAACTGATCTCTCCCTTTCCCACCCCTTACATATTCTCCTCTGAATATGATTGTTGAGTATAATAGGGAACTGATGAAAGATGAGGGAAAATGTGTACACAATTTTGGCTGTGTGCTTTCTATATTTCTTGGGTTGGTTTCGGTTGCCCTTTTAAGCTTTGTTAGGTTCATGAATTTTTTTATCTGAATGTGATTTGGGTTCTGTCCGCATTTCCTCTTAAACCATTATTTCTTGCTGCGTTACTACGTGGATGATTTTAGTGTAAATAGCTTTTATGCAACAATTGTTTTTTGTCTGACGGCTTACCTAATAGGAAGTTAGATACTTGTGGGGAAAGAAGATTAGGTCATTTTTGTACGCTAAGGAAATTTGTTTTTGCCTGGTGGTAGAGCAAATAACAGACACCTTATTGTAGCTTTGCTACTCTATTTAGAGTTTTGTCGTAATTCTTTTTAATAAGACATGGTCACATGCATAGATTTTTTACTCGGTTAATCTCATTGGACAACTCCTCAACCTTAAGATTTGGTTTACAACAAACACCCAAGTTACTAGAATTTCTAGGTAGTTGGCTATTGAACTCATTTCCTTTTAGTTCTCCAACACCCTCTTGGCTACCATCTCAATTTATGGAAAATAAACTCATGCTTCAATTTGAAAATTTATGGTTCCTAAACTTCACAATTTCAATTCTATGCAACATTTTTGGTATTTGTGTATGCATGTTTCATGTTTGGAAGACCAACATGCTTAATAAATCATAGATTTTGAAACAAGGGTAACTATGTCCGTCCCTGCTTAAATCATAGATTTTTTTTTAAATAAGAGTTACCACGCCCATCTCTAGGCCAGACACCGGTAGACATCGAAGGAGTAATGTCACAGCTGAGTCTCGAACTTGGGACCTTGAGGGAGTATATCTTCAAAACCCAAGTCTTCAAACACTGTGCCACCCCTTGGGGACTTAATAAATCATAGATTGATAATAGTTCAGTATAAGGTGGCTCACAGGTCCTGTCTAGAAGTCAACTTGAAGTGTCGGAGAAAACCAAAACTCACTCTTTATCCTATTATTCTTCTGCAATTTGTGGCAAGGCAAAGTCATGAAATTTGTTGATGGTTTTGTTTGAAATATGTGTTTTTCAGCGTCCTTAGTTTGTTGTTCTCTTTTGTTGTGTATTCTTCACCCTGCTATTTGCTCTACCCATTGGAACAGGCTTGAAGCATTCATTGACTTATTATTCTAATATGTTAACAAAAAATACCAATAAGAGCAATAGCTTGCACATGACTAAGATATCACTATAAACTTCTGCCTTCTGGTAGTGTCAAGACCGTTCCCATGCTTGAAGATATAATTTGTTCTTTGTTTGCAGCTCAAGCCTTATGTATCTCAATGCCCAATAGAAATGAAGACAAATGACGGCAGCGAAACAGCTAATTCATAAGCGAAGAGGTATACTGTCTTTAGCTTTTTAAGTTTTTTTTTTTTTTTTTTTTTCATTTTTTCTAAATTTCATTTAAACAATTGGCTTCTTGTTGATTGTAGGCGATTGGATTGGAAACAAGGGGGTGAAATGTTTTCATTACTCAGAGGCGACTGAAGTAAAGAAATATGTACAAACCCTCTACCCTATATGATGAATAGCAAGAAGCCTTCAATTTTTTCTTTGCTTTCGTTTTTATTCTTCTAAAATACTTTTTATTATGGATTGAGTTTGAACATTTGACCTTTTTTTGTTTCTAACCAATTCAATTATGCTCCAATTCGAGACTCAGCTGTGACATTACTCCTTCGATGTCTCCTGGTGCCTGGCTTAAGGACAGGCGTGGTTACTCTTGTTTCAAAAAACAATTATGCTCCAATTGGCCCTTATAAAATGCTCTTGATTTTGTCGAGATGAGAAAGCTACATAACATTTGCTAAGTAGGAGAATGTAGGTAGTTTCAATTTGTATACTCTTGCATTATC

mRNA sequence

AACGAATGCATTTTATAATACCAAACCCATTTATCTCTTTTGTTCGTTTCGTCTTCCCTCTTCCCTTTTCTAGCAGCCGTCGTTGCTGGTCGCGATCTGGCAACGGTGCATCTTCTCCGACGCCGGCGTGAACCTCAGTATCAGCCTAGCCGAAGAAATTTCAGGGTTCTGGTTTTGTTCATTTGTCTCTAACTTCGAAATGGCGTTGGGGCTGATATTAGGTCTCGCAAGAGCAATGAGGAGGAAGCGTACTTCATCTCTCGATATTCTCTCTTCGAAACGAGCTCCAAGAGATTATTACAAGGGCAAGAATTGCAAGCCCACTGGTTTTCATACGCGCAAAGGTGGATACGTTGTGGTGCCTGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGCCCAATAGAAATGAAGACAAATGACGGCAGCGAAACAGCTAATTCATAAGCGAAGAGGCGATTGGATTGGAAACAAGGGGGTGAAATGTTTTCATTACTCAGAGGCGACTGAAGTAAAGAAATATGTACAAACCCTCTACCCTATATGATGAATAGCAAGAAGCCTTCAATTTTTTCTTTGCTTTCGTTTTTATTCTTCTAAAATACTTTTTATTATGGATTGAGTTTGAACATTTGACCTTTTTTTGTTTCTAACCAATTCAATTATGCTCCAATTCGAGACTCAGCTGTGACATTACTCCTTCGATGTCTCCTGGTGCCTGGCTTAAGGACAGGCGTGGTTACTCTTGTTTCAAAAAACAATTATGCTCCAATTGGCCCTTATAAAATGCTCTTGATTTTGTCGAGATGAGAAAGCTACATAACATTTGCTAAGTAGGAGAATGTAGGTAGTTTCAATTTGTATACTCTTGCATTATC

Coding sequence (CDS)

ATGGCGTTGGGGCTGATATTAGGTCTCGCAAGAGCAATGAGGAGGAAGCGTACTTCATCTCTCGATATTCTCTCTTCGAAACGAGCTCCAAGAGATTATTACAAGGGCAAGAATTGCAAGCCCACTGGTTTTCATACGCGCAAAGGTGGATACGTTGTGGTGCCTGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGCTCAAGCCTTATGTATCTCAATGCCCAATAGAAATGAAGACAAATGACGGCAGCGAAACAGCTAATTCATAA

Protein sequence

MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS
Homology
[Close]
BLAST of Sed0022777 vs. NCBI nr
Match: XP_038897038.1 (39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 177.9 bits (450), Expect = 3.9e-41
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL RAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDLTDFKLKPYVSQCPIE+KT+D +E+A S
Sbjct: 61 YVVPDLTDFKLKPYVSQCPIEVKTSDNNESAKS 93

[Close]
BLAST of Sed0022777 vs. NCBI nr
Match: XP_004135839.1 (39S ribosomal protein L41-A, mitochondrial [Cucumis sativus] >XP_031744891.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus] >KGN45301.1 hypothetical protein Csa_015853 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDL+DFKLKPYVSQCPIE+KT+D +E+A S
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS 93

[Close]
BLAST of Sed0022777 vs. NCBI nr
Match: XP_022143129.1 (39S ribosomal protein L41-A, mitochondrial [Momordica charantia] >XP_022143137.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia])

HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL RAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          Y+VPDLTDFKLKPYVSQCP E+KT++ SE+A S
Sbjct: 61 YIVPDLTDFKLKPYVSQCPTEVKTSEASESAKS 93

[Close]
BLAST of Sed0022777 vs. NCBI nr
Match: XP_022982189.1 (39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 5.6e-40
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLAR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDLTDFKLKPYVSQCPIE KT++  E+  S
Sbjct: 61 YVVPDLTDFKLKPYVSQCPIEAKTSEAGESTKS 93

[Close]
BLAST of Sed0022777 vs. NCBI nr
Match: XP_008461075.1 (PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 9.6e-40
Identity = 83/93 (89.25%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDL+DFKLKPYVSQCPIE+ T+D +E+A S
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS 93

[Close]
BLAST of Sed0022777 vs. ExPASy Swiss-Prot
Match: Q6DJI4 (39S ribosomal protein L41-A, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-a PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.0e-09
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 3  LGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYV 62
          +GLI  +AR + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +V
Sbjct: 1  MGLISKIARGLVRGADRMAE-CTSKQGPNSYNKGRGAKKIGYLTASGKFVKVREMVPVFV 60

Query: 63 VPDLTDFKLKPYVS 77
          VPDLT FKLKPYVS
Sbjct: 61 VPDLTGFKLKPYVS 73

[Close]
BLAST of Sed0022777 vs. ExPASy Swiss-Prot
Match: Q6INF3 (39S ribosomal protein L41-B, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-b PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 0 

Query: 3  LGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYV 62
          +GLI  +AR + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +V
Sbjct: 1  MGLITKIARGLVRGADRMAE-CTSKLGPNSYNKGRGAKKIGYLTSSGKFVKVREMVPVFV 60

Query: 63 VPDLTDFKLKPYVS 77
          VPDLT FKLKPYVS
Sbjct: 61 VPDLTGFKLKPYVS 73

[Close]
BLAST of Sed0022777 vs. ExPASy Swiss-Prot
Match: Q9CQN7 (39S ribosomal protein L41, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl41 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-08
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0 

Query: 25 SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS 77
          +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FKLKPYV+
Sbjct: 22 TSKRGPRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVN 73

[Close]
BLAST of Sed0022777 vs. ExPASy Swiss-Prot
Match: Q5BJX1 (39S ribosomal protein L41, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl41 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-08
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 25 SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKLKPYVS 77
          +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FKLKPYV+
Sbjct: 22 TSKRGPRTFTKSRGAKKTGFYTNR-KFVQIKEMVPEFVVPDLTGFKLKPYVN 72

[Close]
BLAST of Sed0022777 vs. ExPASy Swiss-Prot
Match: Q8IXM3 (39S ribosomal protein L41, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL41 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0 

Query: 3  LGLILGLARAMRRKRTSSLDILSSKRAPRDY--YKGKNCKPTGFHTRKGGYVVVPEKLPN 62
          +G++   AR + R     +   +SKR PR +   KG+  K  GF T    +V + E +P 
Sbjct: 1  MGVLAAAARCLVR-GADRMSKWTSKRGPRSFRGRKGRGAKGIGFLTSGWRFVQIKEMVPE 60

Query: 63 YVVPDLTDFKLKPYVS 77
          +VVPDLT FKLKPYVS
Sbjct: 61 FVVPDLTGFKLKPYVS 75

[Close]
BLAST of Sed0022777 vs. ExPASy TrEMBL
Match: A0A6J1CNE9 (39S ribosomal protein L41-A, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013068 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL RAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          Y+VPDLTDFKLKPYVSQCP E+KT++ SE+A S
Sbjct: 61 YIVPDLTDFKLKPYVSQCPTEVKTSEASESAKS 93

[Close]
BLAST of Sed0022777 vs. ExPASy TrEMBL
Match: A0A0A0KBX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433300 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDL+DFKLKPYVSQCPIE+KT+D +E+A S
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELKTSDNNESAKS 93

[Close]
BLAST of Sed0022777 vs. ExPASy TrEMBL
Match: A0A6J1J3V5 (39S ribosomal protein L41-A, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481090 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.7e-40
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLAR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDLTDFKLKPYVSQCPIE KT++  E+  S
Sbjct: 61 YVVPDLTDFKLKPYVSQCPIEAKTSEAGESTKS 93

[Close]
BLAST of Sed0022777 vs. ExPASy TrEMBL
Match: A0A1S3CEC5 (39S ribosomal protein L41-A, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103499774 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.7e-40
Identity = 83/93 (89.25%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGL R MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLGRVMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDL+DFKLKPYVSQCPIE+ T+D +E+A S
Sbjct: 61 YVVPDLSDFKLKPYVSQCPIELNTSDNTESAKS 93

[Close]
BLAST of Sed0022777 vs. ExPASy TrEMBL
Match: A0A6J1FQT8 (39S ribosomal protein L41-A, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111446078 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.0e-39
Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 0 

Query: 1  MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
          MALGLILGLAR+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN
Sbjct: 1  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 61 YVVPDLTDFKLKPYVSQCPIEMKTNDGSETANS 94
          YVVPDLTDFKLKPYVSQC IE KT++  E+  S
Sbjct: 61 YVVPDLTDFKLKPYVSQCHIEAKTSEAGESTKS 93

[Close]
BLAST of Sed0022777 vs. TAIR 10
Match: AT5G39800.1 (Mitochondrial ribosomal protein L27 )

HSP 1 Score: 151.4 bits (381), Expect = 3.7e-37
Identity = 68/88 (77.27%), Postives = 80/88 (90.91%), Query Frame = 0 

Query: 4  GLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVV 63
          GL++G+ R+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVV
Sbjct: 6  GLLMGIGRSFRRKRSSSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65

Query: 64 PDLTDFKLKPYVSQCPIEMKTNDGSETA 92
          PDLT FKLKPYVSQCPI++ TN+ +E +
Sbjct: 66 PDLTGFKLKPYVSQCPIQVNTNESTEAS 93

[Close]
BLAST of Sed0022777 vs. TAIR 10
Match: AT5G40080.1 (Mitochondrial ribosomal protein L27 )

HSP 1 Score: 150.2 bits (378), Expect = 8.1e-37
Identity = 67/88 (76.14%), Postives = 79/88 (89.77%), Query Frame = 0 

Query: 4  GLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVV 63
          GL++G+ R+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVV
Sbjct: 6  GLLMGIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65

Query: 64 PDLTDFKLKPYVSQCPIEMKTNDGSETA 92
          PDLT FKLKPYVSQCP+++ TN+ +E +
Sbjct: 66 PDLTGFKLKPYVSQCPLQVNTNESTEAS 93

[Close]
BLAST of Sed0022777 vs. TAIR 10
Match: AT4G09012.1 (Mitochondrial ribosomal protein L27 )

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-33
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 0 

Query: 1   MALGLILGLARAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60
           M LGL+ G+ R  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPN
Sbjct: 75  MTLGLLFGIGRTFRRKRASSLDILSPKRAPRDFYKGKNCKPPGFHTRK-GYVVQPDKLPN 134

Query: 61  YVVPDLTDFKLKPYVSQCPIEM-KTNDGSETA 92
           YVVPDLT FKLKPYVSQCP+++ KTN+ +E +
Sbjct: 135 YVVPDLTGFKLKPYVSQCPLDVNKTNESTEAS 165

The following BLAST results are available for this feature:
BLAST of Sed0022777 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038897038.13.9e-4192.4739S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida][more]
XP_004135839.12.5e-4090.3239S ribosomal protein L41-A, mitochondrial [Cucumis sativus] >XP_031744891.1 39S... [more]
XP_022143129.12.5e-4090.3239S ribosomal protein L41-A, mitochondrial [Momordica charantia] >XP_022143137.1... [more]
XP_022982189.15.6e-4090.3239S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima][more]
XP_008461075.19.6e-4089.25PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo][more]
BLAST of Sed0022777 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DJI47.0e-0945.9539S ribosomal protein L41-A, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-a... [more]
Q6INF31.2e-0845.9539S ribosomal protein L41-B, mitochondrial OS=Xenopus laevis OX=8355 GN=mrpl41-b... [more]
Q9CQN74.5e-0850.0039S ribosomal protein L41, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl41 PE=1... [more]
Q5BJX14.5e-0851.9239S ribosomal protein L41, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl41... [more]
Q8IXM36.5e-0742.1139S ribosomal protein L41, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL41 PE=1 ... [more]
BLAST of Sed0022777 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CNE91.2e-4090.3239S ribosomal protein L41-A, mitochondrial OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A0A0KBX41.2e-4090.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433300 PE=3 SV=1[more]
A0A6J1J3V52.7e-4090.3239S ribosomal protein L41-A, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3CEC54.7e-4089.2539S ribosomal protein L41-A, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1FQT83.0e-3989.2539S ribosomal protein L41-A, mitochondrial-like OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Sed0022777 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39800.13.7e-3777.27Mitochondrial ribosomal protein L27 [more]
AT5G40080.18.1e-3776.14Mitochondrial ribosomal protein L27 [more]
AT4G09012.11.1e-3373.91Mitochondrial ribosomal protein L27 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019189Ribosomal protein L27/L41, mitochondrialPFAMPF09809MRP-L27coord: 24..81
e-value: 4.2E-18
score: 65.2
IPR019189Ribosomal protein L27/L41, mitochondrialPANTHERPTHR21338MITOCHONDRIAL RIBOSOMAL PROTEIN L41coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0022777.1Sed0022777.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome