Sed0022748 (gene) Chayote v1

Overview


Name	Sed0022748
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Location	LG04: 40452829 .. 40454352 (+)
RNA-Seq Expression	Sed0022748
Synteny	Sed0022748

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTCTTGGTCCCATGGATTTGAATTCAGCTTCTTCAACATCCACCACTGGATATTTTGGTTCTATTTTCCCACCATTGGTTGGTACTTTAATTTCAAATACTAGTTCTGTGCTTCTTAATCTCCCTTTCTGTCTCTATCTCTCTCTCTCAAGATGTGGATTCCCTCAAATGGGTCACTTTCAAATTTTGCTTGTTGATTTTGCATGTTTCAAGTTGATGATATGACAACTTAAAAATAGGCAGAACAAGAATGAGAAAGTTTTTTAGAAGCTTTAATTTCTTTCCAATGGTGTAGAAAGTGTTTGATAAAGGGAATCCGAAAGTGGTTTTGTTCTGTTCTATATGAGTTCTCATGGTCCTTTTAAAGCATGCCTTCATGATTCAACTTTGCTTCTCTGGTTTTAGGTGGTGGAGATAGAGAGAAAACAAGATGTTGGCGGTGGCAAAGTTGGGAATCCAGGTTTAATATTCTTAAACTTGAATTTGAAAATTCGAACATATCTCACTCACTCACAAAGGATAAGAAGCCTACTTCTACCTAAGCAATCTCTTGTGATTTTCACTGTTCAGTAGCTTTTCAAATGGTATTAACTCCTTCATTTATGTAAAACTGGCTTTTGTTCCTCTTAGATAATTCTTCTGTACATGGCATGAATGGAACTAGTGGTGCAAATGGGAAAGATGCAAGCTTCATGTATCAGAATGAAACTATAGAACCAAGCTACTTTAGTTCCTCCATCTTTTATGGTGGCCAAGAAAATTACTCCCCAAGAACCAAAGTCTTAGAATCTCACCATAATGTAAGCATATCAAAGTTATCATGTGCCATCTTTCAAGTAGTTTTCTGTACAGTTTGCATAAAAGTAGGTCTTTTGTTGAGATCTTAATTAACACAAATACAAATATTTGATATTGGTATTGATTTGGAAAACGTTACTGTTGTGTTGATTACTTGATTGCTACTTAATGGTGTGCTATGAACTCAATACTTTATCAGTTTAAGAAAGAAAAGAAAGACAGTTCTGCAATTGGAAGCAATCCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTATGACAACTTCCATGGATTTACTCTTGAACAAAGAAAAACGATGATTGTTAAGACAAATTTCTAACTTAGCAATATGTTTTTTCAGGCTCTCTTTATTACTAACACTCCCATCATAATGGGATTTCCCACCTGCATAGGTAATACTAAACTATCCCTTCGGTTACTCCTCGGTGAGACTCGTTCGATCATCTCGTATTTTTCATGAATGCTTTCTTTCCATTTCGATATACATTGAATCATTATCTGGATTTGGGAAAACTGAATATATGAGCTCTTTCCATAGCCCATCATCTAGTTGACTGACATTCAGTTATTTGATAATGTTTCAGAATTTAGTGACAGTATAATCAACATTGTATTATCATTTACAAGTGAAACTACCATAGTAAAGAAGTAG

mRNA sequence

ATGGGGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTCTTGGTCCCATGGATTTGAATTCAGCTTCTTCAACATCCACCACTGGATATTTTGGTTCTATTTTCCCACCATTGGTGGTGGAGATAGAGAGAAAACAAGATGTTGGCGGTGGCAAAGTTGGGAATCCAGATAATTCTTCTGTACATGGCATGAATGGAACTAGTGGTGCAAATGGGAAAGATGCAAGCTTCATGTATCAGAATGAAACTATAGAACCAAGCTACTTTAGTTCCTCCATCTTTTATGGTGGCCAAGAAAATTACTCCCCAAGAACCAAAGTCTTAGAATCTCACCATAATTTTAAGAAAGAAAAGAAAGACAGTTCTGCAATTGGAAGCAATCCAAACTCTTTGACTGACATTCAGTTATTTGATAATGTTTCAGAATTTAGTGACAGTATAATCAACATTGTATTATCATTTACAAGTGAAACTACCATAGTAAAGAAGTAG

Coding sequence (CDS)

ATGGGGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAAGTTTGGATCATCTTCTTGGTCCCATGGATTTGAATTCAGCTTCTTCAACATCCACCACTGGATATTTTGGTTCTATTTTCCCACCATTGGTGGTGGAGATAGAGAGAAAACAAGATGTTGGCGGTGGCAAAGTTGGGAATCCAGATAATTCTTCTGTACATGGCATGAATGGAACTAGTGGTGCAAATGGGAAAGATGCAAGCTTCATGTATCAGAATGAAACTATAGAACCAAGCTACTTTAGTTCCTCCATCTTTTATGGTGGCCAAGAAAATTACTCCCCAAGAACCAAAGTCTTAGAATCTCACCATAATTTTAAGAAAGAAAAGAAAGACAGTTCTGCAATTGGAAGCAATCCAAACTCTTTGACTGACATTCAGTTATTTGATAATGTTTCAGAATTTAGTGACAGTATAATCAACATTGTATTATCATTTACAAGTGAAACTACCATAGTAAAGAAGTAG

Protein sequence

MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFKKEKKDSSAIGSNPNSLTDIQLFDNVSEFSDSIINIVLSFTSETTIVKK

Homology

[Close]

BLAST of Sed0022748 vs. NCBI nr
Match: KAG6600026.1 (hypothetical protein SDJN03_05259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-48
Identity = 108/135 (80.00%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGN 60
           M NKKQVAASSSS+ D L GPMD NSASSTSTTGYFGSIFP LVVE E+ QDVG GKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFK 120
           PDN+SV+GMNGT GANGK  S +Y NET+EPSYFSSSIFYGGQENYSPRTK+ ESHHNFK
Sbjct: 61  PDNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEKKDSSAIGSNPNS 136
           KE +D+ AIGSN NS
Sbjct: 121 KE-EDNDAIGSNSNS 134

[Close]

BLAST of Sed0022748 vs. NCBI nr
Match: KAG7030695.1 (hypothetical protein SDJN02_04732 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-48
Identity = 108/135 (80.00%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGN 60
           M NKKQVAASSSS+ D L GPMD NSASSTSTTGYFGSIFP LVVE E+ QDVG GKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFK 120
           PDN+SV+GMNGT GANGK  S +Y NET+EPSYFSSSIFYGGQENYSPRTK+ ESHHNFK
Sbjct: 61  PDNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEKKDSSAIGSNPNS 136
           KE +D+ AIGSN NS
Sbjct: 121 KE-EDNDAIGSNSNS 134

[Close]

BLAST of Sed0022748 vs. NCBI nr
Match: XP_022941972.1 (uncharacterized protein LOC111447180 [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 2.3e-47
Identity = 107/135 (79.26%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGN 60
           M NKKQVAASSSS+ D L GPMD NSASSTSTTGYFGSIFP LVVE E+ QDVG GKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFK 120
           P N+SV+GMNGT GANGK  S +Y NET+EPSYFSSSIFYGGQENYSPRTK+ ESHHNFK
Sbjct: 61  PVNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEKKDSSAIGSNPNS 136
           KE +D+ AIGSN NS
Sbjct: 121 KE-EDNDAIGSNSNS 134

[Close]

BLAST of Sed0022748 vs. NCBI nr
Match: XP_023546730.1 (uncharacterized protein LOC111805742 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.5 bits (506), Expect = 2.3e-47
Identity = 107/135 (79.26%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGN 60
           M NKKQVAASSSS+ D L GPMD NSASSTSTTGYFGSIFP LVVE E+ QDVG GKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFK 120
           PDN+SV+ MNGT GANGK  S +Y NET+EPSYFSSSIFYGGQENYSPRTK+ ESHHNFK
Sbjct: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEKKDSSAIGSNPNS 136
           KE +D+ AIGSN NS
Sbjct: 121 KE-EDNDAIGSNSNS 134

[Close]

BLAST of Sed0022748 vs. NCBI nr
Match: XP_022139159.1 (uncharacterized protein LOC111010132 [Momordica charantia])

HSP 1 Score: 199.5 bits (506), Expect = 2.3e-47
Identity = 107/139 (76.98%), Postives = 111/139 (79.86%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGG---- 60
           M  KKQVAASSSSSLDHL GPMD NSASSTST GYFGSIFPP VVE ERKQDVG      
Sbjct: 1   MEXKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGNRXGTC 60

Query: 61  KVGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESH 120
            VGNPDN+S++G NGT GA GKDAS MYQNET+ PSYFSSSI YGGQENYSPRTK  ESH
Sbjct: 61  NVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSSSILYGGQENYSPRTKASESH 120

Query: 121 HNFKKEKKDSSAIGSNPNS 136
           HNFKKE KD    G NPNS
Sbjct: 121 HNFKKEGKDDEVNGGNPNS 139

[Close]

BLAST of Sed0022748 vs. ExPASy TrEMBL
Match: A0A0A0KNZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G188900 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.4e-48
Identity = 120/205 (58.54%), Postives = 136/205 (66.34%), Query Frame = 0


Query: 1   MGNKK-QVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGG---- 60
           M NKK QVA SSSSSLDH+ GPMD NSASSTSTTGYFGS+FPP VVE ERK+DVG     
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  GKVGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLES 120
            +VGNPDN++++G  GT GA+GKD S MYQNET+EPSYFSSSIFYGGQENYSPRT   +S
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

Query: 121 HHNFKKEKKDSSAIGSNPN----------------------------------SLTDIQL 167
           H NFKKE KD+ A  SN N                                    T+IQL
Sbjct: 121 HPNFKKEVKDNDANESNSNPASRGNWWKDHYIDFRQSLMYFSPWICSVPIPSSQFTNIQL 180

[Close]

BLAST of Sed0022748 vs. ExPASy TrEMBL
Match: A0A6J1CC52 (uncharacterized protein LOC111010132 OS=Momordica charantia OX=3673 GN=LOC111010132 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.1e-47
Identity = 107/139 (76.98%), Postives = 111/139 (79.86%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGG---- 60
           M  KKQVAASSSSSLDHL GPMD NSASSTST GYFGSIFPP VVE ERKQDVG      
Sbjct: 1   MEXKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGNRXGTC 60

Query: 61  KVGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESH 120
            VGNPDN+S++G NGT GA GKDAS MYQNET+ PSYFSSSI YGGQENYSPRTK  ESH
Sbjct: 61  NVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSSSILYGGQENYSPRTKASESH 120

Query: 121 HNFKKEKKDSSAIGSNPNS 136
           HNFKKE KD    G NPNS
Sbjct: 121 HNFKKEGKDDEVNGGNPNS 139

[Close]

BLAST of Sed0022748 vs. ExPASy TrEMBL
Match: A0A6J1FNY5 (uncharacterized protein LOC111447180 OS=Cucurbita moschata OX=3662 GN=LOC111447180 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.1e-47
Identity = 107/135 (79.26%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGN 60
           M NKKQVAASSSS+ D L GPMD NSASSTSTTGYFGSIFP LVVE E+ QDVG GKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFK 120
           P N+SV+GMNGT GANGK  S +Y NET+EPSYFSSSIFYGGQENYSPRTK+ ESHHNFK
Sbjct: 61  PVNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 KEKKDSSAIGSNPNS 136
           KE +D+ AIGSN NS
Sbjct: 121 KE-EDNDAIGSNSNS 134

[Close]

BLAST of Sed0022748 vs. ExPASy TrEMBL
Match: A0A6J1K7H1 (uncharacterized protein LOC111491851 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491851 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.1e-46
Identity = 105/135 (77.78%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGN 60
           M NKKQVAASSSS+ D L GPMD NSASSTSTTGYFGSIFP LVVE E+ QDVG GKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFK 120
           PD +SV+GMNGT GANGK  S +Y NET+EPSYFSSSIFYGGQENYSP TK+ ESHHN K
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120

Query: 121 KEKKDSSAIGSNPNS 136
           KE +D+ AIGSN NS
Sbjct: 121 KE-EDNDAIGSNSNS 134

[Close]

BLAST of Sed0022748 vs. ExPASy TrEMBL
Match: A0A6J1KBQ3 (uncharacterized protein LOC111491851 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491851 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.6e-46
Identity = 104/135 (77.04%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MGNKKQVAASSSSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKVGN 60
           M NKKQVAASSSS+ D L GPMD NSASSTSTTGYFGSIFP LV+E E+ QDVG GKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60

Query: 61  PDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHHNFK 120
           PD +SV+GMNGT GANGK  S +Y NET+EPSYFSSSIFYGGQENYSP TK+ ESHHN K
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHNSK 120

Query: 121 KEKKDSSAIGSNPNS 136
           KE +D+ AIGSN NS
Sbjct: 121 KE-EDNDAIGSNSNS 134

[Close]

BLAST of Sed0022748 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 0


Query: 3   NKKQVAASSS-----SSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGK 62
           NKK++ ++SS     SS DH+ GP  ++S+SS+S TG F SIFPP   +   +Q     +
Sbjct: 6   NKKKIVSASSSSSSLSSFDHIFGPR-VSSSSSSSATGLFKSIFPPPSADQLGRQVDFASQ 65

Query: 63  VGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESHH 122
            G+    S +     S  N K+    Y  ET  P + SSS++YGGQE YS  T    +H 
Sbjct: 66  GGHVKYQSPNAKGERS--NKKEKKSYYNEETEPPCHLSSSLYYGGQETYSSTTTT--THD 125

Query: 123 NFKKEKKDSSA 129
            +KK+ ++  +
Sbjct: 126 TYKKDGEEGDS 131

[Close]

BLAST of Sed0022748 vs. TAIR 10
Match: AT2G39855.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 49/114 (42.98%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 1   MGNKKQV---AASSSSSLDHLLGPMDLNSASSTSTTGYFGSIF-PPLVVEIERKQDVGGG 60
           M  KK V   ++SSSSSLDH+ GP   +S SS STTG F SIF PP  V         G 
Sbjct: 1   MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQGNLTSRNGA 60

Query: 61  KVGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRT 111
               P N       G    N +  S+    ET  P   SSSI+YGGQ+NYS  T
Sbjct: 61  AKYQPTNFETPNERGERSKNKERKSYQ-SEETQPPCNLSSSIYYGGQDNYSSST 112

[Close]

BLAST of Sed0022748 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 53/136 (38.97%), Postives = 65/136 (47.79%), Query Frame = 0


Query: 1   MGNKKQV---AASSSSSLDHLLGPMDLNSASSTSTTGYFGSIF-PPLVVEIERKQDVGGG 60
           M  KK V   ++SSSSSLDH+ GP   +S SS STTG F SIF PP  V         G 
Sbjct: 1   MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQGNLTSRNGA 60

Query: 61  KVGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLESH 120
               P N       G    N +  S+    ET  P   SSSI+YGGQ+NYS  T   +++
Sbjct: 61  AKYQPTNFETPNERGERSKNKERKSYQ-SEETQPPCNLSSSIYYGGQDNYSSSTTNPDAY 120

Query: 121 HNFKKEKKDSSAIGSN 133
               +E    SA   N
Sbjct: 121 KKDGEEGDSESASRGN 134

[Close]

BLAST of Sed0022748 vs. TAIR 10
Match: AT5G05965.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06
Identity = 48/110 (43.64%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 1   MGNKKQVAASS--SSSLDHLLGPMDLNSASSTSTTGYFGSIFPPLVVEIERKQDVGGGKV 60
           M  KK  AASS  SSS D+L GP    SASS ST     SIFPP V            K 
Sbjct: 1   MDIKKTKAASSSHSSSFDNLFGPKGSASASSCST--ILDSIFPPPVAR----------KK 60

Query: 61  GNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSP 109
           G+     V G    S A  + +S    +E  E SY+SSSI+YGGQ++YSP
Sbjct: 61  GSHTAPEVQG--NISQATDERSS----HEKRESSYYSSSIYYGGQQHYSP 92

[Close]

BLAST of Sed0022748 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 43.5 bits (101), Expect = 1.9e-04
Identity = 40/139 (28.78%), Postives = 62/139 (44.60%), Query Frame = 0


Query: 2   GNKKQVAASSSSSLDHLLGPM--DLNSASSTSTTGYFGSIFPP----LVVEIERKQDVGG 61
           G KK+ ++SS  S   L   +     + SS S++G  GSIFPP    L  E  R++ V G
Sbjct: 3   GRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETVTG 62

Query: 62  GKVGNPDNSSVHGMNGTSGANGKDASFMYQNETIEPSYFSSSIFYGGQENYSPRTKVLES 121
           G      + +   ++          S   Q++ ++P + SSSI+YGG + Y        +
Sbjct: 63  GCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQPQNSTSN 122

Query: 122 HHNFKKEKKDSSAIGSNPN 135
             N K   +D S   S  N
Sbjct: 123 STNKKDGGEDDSGSASRGN 141

The following BLAST results are available for this feature:

BLAST of Sed0022748 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600026.1	2.1e-48	80.00	hypothetical protein SDJN03_05259, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030695.1	2.1e-48	80.00	hypothetical protein SDJN02_04732 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022941972.1	2.3e-47	79.26	uncharacterized protein LOC111447180 [Cucurbita moschata]	[more]
XP_023546730.1	2.3e-47	79.26	uncharacterized protein LOC111805742 [Cucurbita pepo subsp. pepo]	[more]
XP_022139159.1	2.3e-47	76.98	uncharacterized protein LOC111010132 [Momordica charantia]	[more]

BLAST of Sed0022748 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022748 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNZ9	8.4e-48	58.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G188900 PE=4 SV=1	[more]
A0A6J1CC52	1.1e-47	76.98	uncharacterized protein LOC111010132 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1FNY5	1.1e-47	79.26	uncharacterized protein LOC111447180 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A6J1K7H1	2.1e-46	77.78	uncharacterized protein LOC111491851 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KBQ3	4.6e-46	77.04	uncharacterized protein LOC111491851 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Sed0022748 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55646.1	1.4e-10	35.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G39855.1	2.0e-09	42.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G39855.2	2.0e-09	38.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G05965.1	1.6e-06	43.64	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G02020.1	1.9e-04	28.78	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..79
None	No IPR available	PANTHER	PTHR33738:SF21	PLANT/PROTEIN-RELATED	coord: 1..135
None	No IPR available	PANTHER	PTHR33738	EMB\|CAB82975.1	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022748.1	Sed0022748.1	mRNA