Sed0022740 (gene) Chayote v1

Overview


Name	Sed0022740
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S acidic ribosomal protein P0
Location	LG07: 41106825 .. 41109741 (-)
RNA-Seq Expression	Sed0022740
Synteny	Sed0022740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGAATGTACAAAATAGAAAAAGCCCATTACCGTCTCAGCCCAAAACATAAAAGCCCAGAACACAGACCCTAGGATCTAGGGTTTAGACGAAACCCTAATTCCCAAATCCAACATTTAAAAACCGAACCAGCGCCTCCATTCATCTTCACCAAATCGCAAAGCTCCCCAGGAGTTGTTCAAAACCCTAGAAATTTCCTGCAGCATTTCGCAGAGGTTAAAGCGACGGCATAGCTTCCGCTGTCCGCCTTGACAGAGTCCTCAGCTTCGTCTTGGCCCTCGGTTTTGCTTTCTCCACTTCTAACTCAAGTTTTAGGTTTTTCTTCAGAAACACATTTCAATGGCGGTGAAACCCTCCAAGGCTCAGAAGAAGGTCGCCTACGACGCGAAGCTCTGCCAGCTCCTCGACGAGTACAGCCAGGTCTTGATTGTGGCCGCTGATAATGTCGGATCTAACCAGCTCCAGAACATTCGGAAGGGTCTCCGTGGTGACTCTATTGTTCTTATGGGGAAGAACACGATGATGAAGCGGTCTGTTAGGATTCACTCTGAGAAGACTGGGAACAAAGTTTATCTCAATCTTCTTCCTCTTCTTGTGGTATGTTAACTTCTGCATTAAATCATTCTTTGATTTTTTCGACTATGTTGTTAATGAATGGCCTGTGATTTGGAGAATTTGTCCGTACCATCTGAGATGTATTTCGATGGAGTATACAATCGTTTTATGTTCTGAGGCCTTGAGAGTGTTCATTAACAATAAGTTATAAGAAATTGTTTATTGTTTTTGTCTTTGTTGCGATGATTTTCAATTGGAAGGCAATAAATTAGAGTCTCTGATGCGCTTCTTAATTATCTATAGCGTTTTCAGCGCTGTACGTTGCCTATAGTAATTCTGGGAGATAAGATTTTTGCATTTGCTTCCTTGTGTTGCTTTTGCTTTCAAATTTTCCTACATTTTGTTACCCTTTAATAAAATTGTCTTTTTTTCTTGAATTCTTTGAAGAAACGTCTCTCTGAAATCTCATGTTTAGAGTTGGGGATGTTATTTTAAAATATTTATGGTCGGTTTATTTATATTTGATGACTATTTTATAATGTTTAATCTACTCTATGTAGGTAAATTTAACGTTTATGTAATAGTTTGATTGAACTTGTACTAATTAGTTACCTTTATTGCTTGATAGTGGTTGTTTTTAATGGACTATTTGACTTAATATTCCCTTGTGTTTTGACTGATTTAGGGAAATGTTGGTTTGATCTTCACCAAGGGAGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTTGTTGCAATTCCTTTTAGTTTATATTTATTGTTTCACATAGCAAATAGTGTAATGGGAACCAAATTTTATGCATTGTCCTGACTAACATTACGATAATGCTATTCTGTTCAGCAATTTGAATTTACCTGGTTTTTGTTGGAATCACTTGAGACCATCATAATTTGTTGTATGTGTAAATTTTGTATTTTGAATTTAGGTTTTGTGAAATCATTCTTCTACCTATGGTGATACTGCTATGTTGTGTTTGATGCATATTATTACATTGATAATGCAGTGTAAGTCATTGTAATTGATTTGGAGAAGGGATTCTTGTCGCAGCTATGTTTTGGCCTTGATTAATAGAATTTGGTTGAGATCTTATGCCTTCTATATTTTTCTGTTTGGATTCTTTTCACATCTTTGTTTTGACCCTGATTAATAGTATTTAGTTGAAATACTATGCCTTCTATATTTTTCTGTTTGGATTTTCTTTTTTGAATTTTCTTATTGATGTCCATTGTTTATTCAGTAACCCTTTTTGTAATCTGATTTATTCAGGTTGGAGCCCCTGCTCGTGTTGGGTTGGTTGCTCCCATTGATGTCATTGTCCCACCAGGCAACACAGGGCTTGATCCATCCCAGACATCTTTCTTCCAGGTTTGTTAATTTGATTACAAATTATTCCCTTTTCCAAGAATGGAATATGAGGTTACAAATTCTGCTCCTTACAGGTTCTTAACATCCCAACCAAGATTAACAAGGGTACTGTCGAAATTATCACTCCTGTTGAGCTCATTAAGAAGGGTGAAAAGGTTGGATCATCCGAAGCTGCTCTCCTTGCCAAGCTTGGAATTAGGCCATTCTCATATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGTTCAGTCTTCACTCCTGAGGTGCTTGATCTGACTGAGGATGATCTCCTTGAGAAGTTTGCCTTGGGTGTTTCCATGGTCACTTCTTTGTCGATGGCGATTTCATACCCAACATTGGCTGCTGCACCGCACATGCTCATCAATGCATACAAAAATCTTCTTGCTGTTGCGGTTGCCACTGACTACTCGTTCCCACTTGCTGAGAAAGTTAAGGAGTATCTCGAGGTACCATGCCCGCCCATGTTCACAAAGTTCTTTGCCTCAATGAAGTTTGCTTTGGTTAACGTTGTTGTTAACTAATTGTGGTGCTCTAATATTTGTACAGGATCCTAGCAAGTTTGCCGTGTCTGTGTCTGCTGTTGCCGATTCTGGCTCTGCCCCTGCCCCTGCCCCTGCTGCTGCAGCAGTGGAAGAGAAGAAGGACGAACCAGCAGAGGAGTCCGATGATGACATGGGTTTCAGCTTGTTTGACTAATCTGTATGTTAGAGAATTAAAAACTTATGTTTTGCTTCGTTTAGACTCTTAAGTTTTAAGTTATCGTTATGTTTCTTTGGAATTGTTTCAATTTCTTTTGACTTTGTTCAATGAAATATTGAGTTGTTGGAATTTCAGCTATTTTGTTAGTACATAATATCATTCAATAGAATTTGTGATCAAATGTTATGTTGAGACTATTAAAGCATGAAAGGATTATTTTTGGAATGACAGGAACAGCATAACTCTCA

mRNA sequence

GCCGAATGTACAAAATAGAAAAAGCCCATTACCGTCTCAGCCCAAAACATAAAAGCCCAGAACACAGACCCTAGGATCTAGGGTTTAGACGAAACCCTAATTCCCAAATCCAACATTTAAAAACCGAACCAGCGCCTCCATTCATCTTCACCAAATCGCAAAGCTCCCCAGGAGTTGTTCAAAACCCTAGAAATTTCCTGCAGCATTTCGCAGAGGTTAAAGCGACGGCATAGCTTCCGCTGTCCGCCTTGACAGAGTCCTCAGCTTCGTCTTGGCCCTCGGTTTTGCTTTCTCCACTTCTAACTCAAGTTTTAGGTTTTTCTTCAGAAACACATTTCAATGGCGGTGAAACCCTCCAAGGCTCAGAAGAAGGTCGCCTACGACGCGAAGCTCTGCCAGCTCCTCGACGAGTACAGCCAGGTCTTGATTGTGGCCGCTGATAATGTCGGATCTAACCAGCTCCAGAACATTCGGAAGGGTCTCCGTGGTGACTCTATTGTTCTTATGGGGAAGAACACGATGATGAAGCGGTCTGTTAGGATTCACTCTGAGAAGACTGGGAACAAAGTTTATCTCAATCTTCTTCCTCTTCTTGTGGGAAATGTTGGTTTGATCTTCACCAAGGGAGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGGTTGGTTGCTCCCATTGATGTCATTGTCCCACCAGGCAACACAGGGCTTGATCCATCCCAGACATCTTTCTTCCAGGTTCTTAACATCCCAACCAAGATTAACAAGGGTACTGTCGAAATTATCACTCCTGTTGAGCTCATTAAGAAGGGTGAAAAGGTTGGATCATCCGAAGCTGCTCTCCTTGCCAAGCTTGGAATTAGGCCATTCTCATATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGTTCAGTCTTCACTCCTGAGGTGCTTGATCTGACTGAGGATGATCTCCTTGAGAAGTTTGCCTTGGGTGTTTCCATGGTCACTTCTTTGTCGATGGCGATTTCATACCCAACATTGGCTGCTGCACCGCACATGCTCATCAATGCATACAAAAATCTTCTTGCTGTTGCGGTTGCCACTGACTACTCGTTCCCACTTGCTGAGAAAGTTAAGGAGTATCTCGAGGATCCTAGCAAGTTTGCCGTGTCTGTGTCTGCTGTTGCCGATTCTGGCTCTGCCCCTGCCCCTGCCCCTGCTGCTGCAGCAGTGGAAGAGAAGAAGGACGAACCAGCAGAGGAGTCCGATGATGACATGGGTTTCAGCTTGTTTGACTAATCTGTATGTTAGAGAATTAAAAACTTATGTTTTGCTTCGTTTAGACTCTTAAGTTTTAAGTTATCGTTATGTTTCTTTGGAATTGTTTCAATTTCTTTTGACTTTGTTCAATGAAATATTGAGTTGTTGGAATTTCAGCTATTTTGTTAGTACATAATATCATTCAATAGAATTTGTGATCAAATGTTATGTTGAGACTATTAAAGCATGAAAGGATTATTTTTGGAATGACAGGAACAGCATAACTCTCA

Coding sequence (CDS)

ATGGCGGTGAAACCCTCCAAGGCTCAGAAGAAGGTCGCCTACGACGCGAAGCTCTGCCAGCTCCTCGACGAGTACAGCCAGGTCTTGATTGTGGCCGCTGATAATGTCGGATCTAACCAGCTCCAGAACATTCGGAAGGGTCTCCGTGGTGACTCTATTGTTCTTATGGGGAAGAACACGATGATGAAGCGGTCTGTTAGGATTCACTCTGAGAAGACTGGGAACAAAGTTTATCTCAATCTTCTTCCTCTTCTTGTGGGAAATGTTGGTTTGATCTTCACCAAGGGAGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGGTTGGTTGCTCCCATTGATGTCATTGTCCCACCAGGCAACACAGGGCTTGATCCATCCCAGACATCTTTCTTCCAGGTTCTTAACATCCCAACCAAGATTAACAAGGGTACTGTCGAAATTATCACTCCTGTTGAGCTCATTAAGAAGGGTGAAAAGGTTGGATCATCCGAAGCTGCTCTCCTTGCCAAGCTTGGAATTAGGCCATTCTCATATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGTTCAGTCTTCACTCCTGAGGTGCTTGATCTGACTGAGGATGATCTCCTTGAGAAGTTTGCCTTGGGTGTTTCCATGGTCACTTCTTTGTCGATGGCGATTTCATACCCAACATTGGCTGCTGCACCGCACATGCTCATCAATGCATACAAAAATCTTCTTGCTGTTGCGGTTGCCACTGACTACTCGTTCCCACTTGCTGAGAAAGTTAAGGAGTATCTCGAGGATCCTAGCAAGTTTGCCGTGTCTGTGTCTGCTGTTGCCGATTCTGGCTCTGCCCCTGCCCCTGCCCCTGCTGCTGCAGCAGTGGAAGAGAAGAAGGACGAACCAGCAGAGGAGTCCGATGATGACATGGGTTTCAGCTTGTTTGACTAA

Protein sequence

MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAAPHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAVADSGSAPAPAPAAAAVEEKKDEPAEESDDDMGFSLFD

Homology

[Close]

BLAST of Sed0022740 vs. NCBI nr
Match: XP_023534812.1 (60S acidic ribosomal protein P0 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 571.6 bits (1472), Expect = 4.2e-159
Identity = 303/323 (93.81%), Postives = 316/323 (97.83%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+PEVLDLTEDDLLEKFA+GVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYLEDPSKFAV+V+ + ADSG+APA A AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKKDEPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKDEPAEESDDDMGFSLFD 323

[Close]

BLAST of Sed0022740 vs. NCBI nr
Match: XP_038892643.1 (60S acidic ribosomal protein P0 [Benincasa hispida])

HSP 1 Score: 568.2 bits (1463), Expect = 4.7e-158
Identity = 304/324 (93.83%), Postives = 316/324 (97.53%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+PEVLDLTEDDLLEKFALGVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKF--AVSVSAVADSGSAPAPAPAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYLEDPSKF  AV+VSA ADSG+APA   AA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAAADSGAAPA---AA 300

Query: 301 AAVEEKKDEPAEESDDDMGFSLFD 323
           AAVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AAVEEKKEEPAEESDDDMGFSLFD 321

[Close]

BLAST of Sed0022740 vs. NCBI nr
Match: XP_022987157.1 (60S acidic ribosomal protein P0 [Cucurbita maxima])

HSP 1 Score: 565.8 bits (1457), Expect = 2.3e-157
Identity = 302/323 (93.50%), Postives = 315/323 (97.52%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+PEVLDLTEDDLLEKFALGVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYLEDPSKFAV+V+ + ADSG+APA   AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPA---AAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. NCBI nr
Match: XP_022957404.1 (60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical protein SDJN03_06169, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031572.1 hypothetical protein SDJN02_05613 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 565.1 bits (1455), Expect = 3.9e-157
Identity = 301/323 (93.19%), Postives = 315/323 (97.52%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+PEVLDLTEDDLLEKFA+GVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYLEDPSKFAV+V+ + ADSG+APA   AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPA---AAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. NCBI nr
Match: XP_008463223.1 (PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo] >KAA0037392.1 60S acidic ribosomal protein P0 [Cucumis melo var. makuwa] >TYJ97519.1 60S acidic ribosomal protein P0 [Cucumis melo var. makuwa])

HSP 1 Score: 561.6 bits (1446), Expect = 4.4e-156
Identity = 300/323 (92.88%), Postives = 314/323 (97.21%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KP+KA+KKVAYD+KLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+P+VLDLTEDDLLEKFALGVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYL DPSKFAV+V+ + ADSGSAP    AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAP---EAAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. ExPASy Swiss-Prot
Match: P50346 (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.9e-147
Identity = 275/323 (85.14%), Postives = 301/323 (93.19%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA K +KA+KK+AYDAKLC L++EY Q+L+V +DNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVR+H+EKTGN  YLNL+PLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KG+KVGSSEAALLAK
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+PEVLDLTEDDL+ KFA GVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAV-SVSAVADSGSAPAPAPAAA 300
           PHM +NAYKN+LAVAV TDYSFP A+KVKEYL+DPSKFAV +V+A A +  APA   AAA
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPA---AAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
             EEKK+EPAEESDDDMGFSLFD
Sbjct: 301 KEEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. ExPASy Swiss-Prot
Match: P41095 (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP0 PE=1 SV=3)

HSP 1 Score: 497.7 bits (1280), Expect = 1.0e-139
Identity = 254/322 (78.88%), Postives = 293/322 (90.99%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+K +KA+KKVAYD KLCQLLDEY++VLI  ADNVGSNQLQ IRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           +++R +++H++ TGNK +L L+PLLVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           P+DV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSE+ALLAK
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLV+ +VYD+GSVF+PEVLDLTEDDL+EKFA GVSMV S+S+AISYPT+AAA
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAVADSGSAPAPAPAAAA 300
           PHM +N YKN+LAVAV T+YS+P A+K+KEYL+DPSKFAV+    ADSG+A   AP+AA 
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAA---APSAAK 300

Query: 301 VEEKKDEPAEESDDDMGFSLFD 323
            EEKK+EP EESD D+G SLFD
Sbjct: 301 EEEKKEEPEEESDGDLGMSLFD 319

[Close]

BLAST of Sed0022740 vs. ExPASy Swiss-Prot
Match: P57691 (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.3e-139
Identity = 263/321 (81.93%), Postives = 292/321 (90.97%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE +GN   LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF+PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAV-ADSGSAPAPAPAAAAV 302
           M INAYKN LA+AVATDY+FP AEKVKE+L+DPSKF V+ +AV AD+G   A A AAA V
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EEKKDEPAEESDDDMGFSLFD 323
           EEKK+E ++E D + GF LFD
Sbjct: 302 EEKKEE-SDEEDYEGGFGLFD 321

[Close]

BLAST of Sed0022740 vs. ExPASy Swiss-Prot
Match: O04204 (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 4.3e-138
Identity = 261/321 (81.31%), Postives = 291/321 (90.65%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVK +KA+KK+ YD+KLCQLL+EYSQ+L+VAADNVGS QLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH++KTGN+ +L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF PEVL+LTEDDL+EKFA GVSM+T+LS+AISYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAVADSGSAPAPAPAAAA 300
           PHM +NAYKN+LAVA+AT+YSFP AE VKE+L+DP+KFAV+V+A     S    A  A A
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGES--GGAVVAVA 300

Query: 301 VEEKKDEPAEESDDDMGFSLF 322
           VEE   E AEESD DMGF LF
Sbjct: 301 VEE---EAAEESDGDMGFDLF 316

[Close]

BLAST of Sed0022740 vs. ExPASy Swiss-Prot
Match: Q42112 (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 SV=2)

HSP 1 Score: 489.2 bits (1258), Expect = 3.6e-137
Identity = 262/320 (81.88%), Postives = 286/320 (89.38%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE TGN   LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF+PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAVADSGSAPAPAPAAAAVE 302
           M INAYKN LA+AVAT+Y+FP AEKVKEYL+DPSKFAV+ S  A S  A   APAAA VE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVA-SVAAVSADAGGGAPAAAKVE 301

Query: 303 EKKDEPAEESDDDMGFSLFD 323
           EK  E ++E D    F LFD
Sbjct: 302 EK--EESDEEDYGGDFGLFD 318

[Close]

BLAST of Sed0022740 vs. ExPASy TrEMBL
Match: A0A6J1J9L0 (60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.1e-157
Identity = 302/323 (93.50%), Postives = 315/323 (97.52%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+PEVLDLTEDDLLEKFALGVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYLEDPSKFAV+V+ + ADSG+APA   AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPA---AAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. ExPASy TrEMBL
Match: A0A6J1H1U9 (60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.9e-157
Identity = 301/323 (93.19%), Postives = 315/323 (97.52%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVKP+KA+KKVAYD+KLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+PEVLDLTEDDLLEKFA+GVSMVTSLS+A+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYLEDPSKFAV+V+ + ADSG+APA   AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPA---AAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. ExPASy TrEMBL
Match: A0A5D3BEN1 (60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00300 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.1e-156
Identity = 300/323 (92.88%), Postives = 314/323 (97.21%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KP+KA+KKVAYD+KLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+P+VLDLTEDDLLEKFALGVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYL DPSKFAV+V+ + ADSGSAP    AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAP---EAAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. ExPASy TrEMBL
Match: A0A1S3CIR4 (60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.1e-156
Identity = 300/323 (92.88%), Postives = 314/323 (97.21%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KP+KA+KKVAYD+KLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+P+VLDLTEDDLLEKFALGVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYL DPSKFAV+V+ + ADSGSAP    AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAP---EAAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. ExPASy TrEMBL
Match: A0A0A0KM27 (60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.8e-156
Identity = 300/323 (92.88%), Postives = 314/323 (97.21%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KP+KA+KKVAYD+KLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSE+TGNK YLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVF+P+VLDLTEDDLLEKFALGVSMVTSLS+AISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVS-AVADSGSAPAPAPAAA 300
           PHMLINAYKNLLAVAVATDYSFP AEKVKEYL DPSKFAV+V+ + ADSGSAP    AAA
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSSADSGSAP---EAAA 300

Query: 301 AVEEKKDEPAEESDDDMGFSLFD 323
           AVEEKK+EPAEESDDDMGFSLFD
Sbjct: 301 AVEEKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of Sed0022740 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 497.3 bits (1279), Expect = 9.4e-141
Identity = 263/321 (81.93%), Postives = 292/321 (90.97%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE +GN   LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF+PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAV-ADSGSAPAPAPAAAAV 302
           M INAYKN LA+AVATDY+FP AEKVKE+L+DPSKF V+ +AV AD+G   A A AAA V
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EEKKDEPAEESDDDMGFSLFD 323
           EEKK+E ++E D + GF LFD
Sbjct: 302 EEKKEE-SDEEDYEGGFGLFD 321

[Close]

BLAST of Sed0022740 vs. TAIR 10
Match: AT2G40010.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 492.3 bits (1266), Expect = 3.0e-139
Identity = 261/321 (81.31%), Postives = 291/321 (90.65%), Query Frame = 0


Query: 1   MAVKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAVK +KA+KK+ YD+KLCQLL+EYSQ+L+VAADNVGS QLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH++KTGN+ +L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF PEVL+LTEDDL+EKFA GVSM+T+LS+AISYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAVADSGSAPAPAPAAAA 300
           PHM +NAYKN+LAVA+AT+YSFP AE VKE+L+DP+KFAV+V+A     S    A  A A
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGES--GGAVVAVA 300

Query: 301 VEEKKDEPAEESDDDMGFSLF 322
           VEE   E AEESD DMGF LF
Sbjct: 301 VEE---EAAEESDGDMGFDLF 316

[Close]

BLAST of Sed0022740 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 489.2 bits (1258), Expect = 2.6e-138
Identity = 262/320 (81.88%), Postives = 286/320 (89.38%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DEY+Q+L+VAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE TGN   LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF+PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAVADSGSAPAPAPAAAAVE 302
           M INAYKN LA+AVAT+Y+FP AEKVKEYL+DPSKFAV+ S  A S  A   APAAA VE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVA-SVAAVSADAGGGAPAAAKVE 301

Query: 303 EKKDEPAEESDDDMGFSLFD 323
           EK  E ++E D    F LFD
Sbjct: 302 EK--EESDEEDYGGDFGLFD 318

[Close]

BLAST of Sed0022740 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 413.3 bits (1061), Expect = 1.8e-115
Identity = 231/320 (72.19%), Postives = 254/320 (79.38%), Query Frame = 0


Query: 3   VKPSKAQKKVAYDAKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           VK +KA+KK+AYD KLCQL+DEY+Q+L+                                
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILV-------------------------------- 61

Query: 63  KRSVRIHSEKTGNKVYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
            RSVRIHSE TGN   LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  -RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+G+KVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFTPEVLDLTEDDLLEKFALGVSMVTSLSMAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVF+PEVLDLTED L+EKFA G+SMVTSL++A+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPLAEKVKEYLEDPSKFAVSVSAVADSGSAPAPAPAAAAVE 302
           M INAYKN LA+AVAT+Y+FP AEKVKEYL+DPSKFAV+ S  A S  A   APAAA VE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVA-SVAAVSADAGGGAPAAAKVE 285

Query: 303 EKKDEPAEESDDDMGFSLFD 323
           EK  E ++E D    F LFD
Sbjct: 302 EK--EESDEEDYGGDFGLFD 285

[Close]

BLAST of Sed0022740 vs. TAIR 10
Match: AT1G25260.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.7e-07
Identity = 45/207 (21.74%), Postives = 96/207 (46.38%), Query Frame = 0


Query: 20  QLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRIHSEKTGNKVYL 79
           + +++YS V + + +N+ + + +  R+  R +    +G N +M+ ++   +E        
Sbjct: 32  EAVEKYSSVYVFSFENMRNIKFKEFRQQFRHNGKFFLGSNKVMQVALGRSAEDELRSGIY 91

Query: 80  NLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQT 139
            +  LL G+ GL+ T    +EV      Y+    +R G +A   V +  G          
Sbjct: 92  KVSKLLRGDTGLLVTDMPKEEVESLFNAYEDSDFSRTGSIAVETVELKEGPLEQFTHEME 151

Query: 140 SFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDN 199
              + L +P ++NKGTVE++    + ++G+++    A +L  L ++  ++ L +L  +  
Sbjct: 152 PLLRKLEMPVRLNKGTVELVADFVVCEEGKQLSPKSAHILRLLRMKMATFKLNLLCRW-- 211

Query: 200 GSVFTPEVLDLTEDDLLEKFALGVSMV 226
               +P   +L  +DL E +   +S V
Sbjct: 212 ----SPSDFELYREDLSELYREDLSDV 232

The following BLAST results are available for this feature:

BLAST of Sed0022740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534812.1	4.2e-159	93.81	60S acidic ribosomal protein P0 [Cucurbita pepo subsp. pepo]	[more]
XP_038892643.1	4.7e-158	93.83	60S acidic ribosomal protein P0 [Benincasa hispida]	[more]
XP_022987157.1	2.3e-157	93.50	60S acidic ribosomal protein P0 [Cucurbita maxima]	[more]
XP_022957404.1	3.9e-157	93.19	60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical ...	[more]
XP_008463223.1	4.4e-156	92.88	PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo] >KAA0037392.1 60S acid...	[more]

BLAST of Sed0022740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50346	2.9e-147	85.14	60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P41095	1.0e-139	78.88	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP...	[more]
P57691	1.3e-139	81.93	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ...	[more]
O04204	4.3e-138	81.31	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ...	[more]
Q42112	3.6e-137	81.88	60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 ...	[more]

BLAST of Sed0022740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9L0	1.1e-157	93.50	60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3...	[more]
A0A6J1H1U9	1.9e-157	93.19	60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE...	[more]
A0A5D3BEN1	2.1e-156	92.88	60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CIR4	2.1e-156	92.88	60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=...	[more]
A0A0A0KM27	2.8e-156	92.88	60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 ...	[more]

BLAST of Sed0022740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11250.1	9.4e-141	81.93	Ribosomal protein L10 family protein	[more]
AT2G40010.1	3.0e-139	81.31	Ribosomal protein L10 family protein	[more]
AT3G09200.1	2.6e-138	81.88	Ribosomal protein L10 family protein	[more]
AT3G09200.2	1.8e-115	72.19	Ribosomal protein L10 family protein	[more]
AT1G25260.1	4.7e-07	21.74	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 6..209 e-value: 2.0E-47 score: 162.4
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 9..134
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 114..183 e-value: 7.5E-21 score: 73.9
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 234..321 e-value: 1.2E-19 score: 70.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..322
None	No IPR available	PANTHER	PTHR45699	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 1..322
None	No IPR available	PANTHER	PTHR45699:SF18	60S ACIDIC RIBOSOMAL PROTEIN P0-1	coord: 1..322
None	No IPR available	CDD	cd05795	Ribosomal_P0_L10e	coord: 9..185 e-value: 6.95813E-86 score: 254.035
IPR030670	60S acidic ribosomal protein P0	PIRSF	PIRSF039087	L10E	coord: 1..322 e-value: 5.6E-132 score: 437.4
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 7..108 e-value: 3.5E-19 score: 68.8
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 114..185 e-value: 1.6E-33 score: 116.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022740.1	Sed0022740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome