Homology
BLAST of Sed0022733 vs. NCBI nr
Match:
XP_038892001.1 (CRS2-associated factor 2, chloroplastic [Benincasa hispida])
HSP 1 Score: 932.9 bits (2410), Expect = 1.2e-267
Identity = 475/559 (84.97%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MARIPSLPGLNLFSSLPS PPP DPS TSSPSTPIPIPKYPPPKSRTLRT NPPK N
Sbjct: 1 MARIPSLPGLNLFSSLPS--APPPHDPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKPPN 60
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRS YY+PVKDGVISSHGDR+VV+G+SGVSYLLPDAPFEFQYSYSETPKVKPI
Sbjct: 61 PALKTFHRRSNYYRPVKDGVISSHGDRSVVIGDSGVSYLLPDAPFEFQYSYSETPKVKPI 120
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQMPGPFPLG 180
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 181 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 240
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 241 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 301 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 360
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
VDC+GMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWK +DRSAPLP++V +
Sbjct: 361 VDCSGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKLVISDDRSAPLPTRVSS 420
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+ G SGE+IENGDL H N IKTSPKMKLLWERAI SNKALLLDEIGLAPDD+LEKV
Sbjct: 421 NDSSGSSGESIENGDLLHGNHHKIKTSPKMKLLWERAIGSNKALLLDEIGLAPDDLLEKV 480
Query: 481 EEFERISQANEHSYPALILSNE-----EESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFE+ISQA EHSYPA I S+E ++SPE+QD+S+A+Y+S DDD D E DLF VDP
Sbjct: 481 EEFEKISQATEHSYPAFITSSEDVSSPDDSPESQDHSQANYNS-DDDVDWEGDLFDNVDP 540
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLSPE
Sbjct: 541 IVPLGSLPVDIIAKKLSPE 556
BLAST of Sed0022733 vs. NCBI nr
Match:
XP_023542721.1 (CRS2-associated factor 2, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 926.8 bits (2394), Expect = 8.8e-266
Identity = 474/559 (84.79%), Postives = 500/559 (89.45%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRTNPPKNLNP 60
MAR+PSLPGL+LFSSLPS PPP DPSS S+PSTPIPIPKYP PKSR LRTNPPK NP
Sbjct: 1 MARMPSLPGLHLFSSLPS--APPPHDPSSASTPSTPIPIPKYPQPKSRILRTNPPKPPNP 60
Query: 61 ALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPIA 120
ALKTFHRRSKYYKPVKDGVISSHGDRAVV+G+SGVSYLLPDAPFEFQYSYSE PKVKPIA
Sbjct: 61 ALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIA 120
Query: 121 IREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLGK 180
IREPAFLPFAPPTMPRPWTGKAPLKSSK KIP+ DSFN P K ++ G LGK
Sbjct: 121 IREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPVFDSFNPPPPGTKGVKQVEMPGPFPLGK 180
Query: 181 YPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRVC 240
YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRVC
Sbjct: 181 YPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC 240
Query: 241 KVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA 300
KVRCKGVPTVDM+NICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA
Sbjct: 241 KVRCKGVPTVDMDNICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA 300
Query: 301 PVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 360
PVYPKLIQEAP+GLT EEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV
Sbjct: 301 PVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 360
Query: 361 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRTK 420
DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS ED SA LPSQ RT
Sbjct: 361 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDPSATLPSQARTN 420
Query: 421 DALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKVE 480
D GE+IENGDL H N TIKTSPKMKLLWE+AIDSNKALLL+EIGLAPDD+LEKVE
Sbjct: 421 D-----GESIENGDLLHGNHQTIKTSPKMKLLWEKAIDSNKALLLNEIGLAPDDLLEKVE 480
Query: 481 EFERISQANEHSYPALILSNEEESP------ENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EFERISQA EHSYPALI+S+E++S E+QD+ E++YSS DDDED+E DLF V+P
Sbjct: 481 EFERISQATEHSYPALIMSSEDDSSSPDDNLESQDHDESNYSS-DDDEDREGDLFDNVNP 540
Query: 541 SVPLGSLPVDIIAKKLSPE 552
+VP+GSLPVDIIAKKL PE
Sbjct: 541 TVPMGSLPVDIIAKKLRPE 551
BLAST of Sed0022733 vs. NCBI nr
Match:
XP_008446191.1 (PREDICTED: CRS2-associated factor 2, chloroplastic [Cucumis melo])
HSP 1 Score: 926.0 bits (2392), Expect = 1.5e-265
Identity = 471/559 (84.26%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MA IPSLPGL LFSSLPS PPP +PS TSSPSTPIPIPKYPPPKSRTLRT NPPK+ N
Sbjct: 56 MATIPSLPGLTLFSSLPS--APPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPN 115
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRSKYYKPVKDGVISS+G+RAVV+G+SGVSYLLP APFEFQYSYSETP VKPI
Sbjct: 116 PALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPI 175
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 176 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLG 235
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 236 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 295
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 296 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 355
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 356 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 415
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS +DRSAPLPS+ +
Sbjct: 416 IDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASS 475
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+LG SGE++EN DL + N TIKTSPKMKLLWERAIDSNKAL+LDEIGLAPD++LE+V
Sbjct: 476 NDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERV 535
Query: 481 EEFERISQANEHSYPALILSNEE-----ESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFERISQA EHSYPA I S+EE +SPE+QD+SEA+Y+S DDD +EEDLF VDP
Sbjct: 536 EEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNS-DDDVGREEDLFDNVDP 595
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLS E
Sbjct: 596 LVPLGSLPVDIIAKKLSSE 611
BLAST of Sed0022733 vs. NCBI nr
Match:
TYK15617.1 (RNA splicing factor [Cucumis melo var. makuwa])
HSP 1 Score: 926.0 bits (2392), Expect = 1.5e-265
Identity = 471/559 (84.26%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MA IPSLPGL LFSSLPS PPP +PS TSSPSTPIPIPKYPPPKSRTLRT NPPK+ N
Sbjct: 1 MATIPSLPGLTLFSSLPS--APPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPN 60
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRSKYYKPVKDGVISS+G+RAVV+G+SGVSYLLP APFEFQYSYSETP VKPI
Sbjct: 61 PALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPI 120
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLG 180
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 181 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 240
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 241 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 301 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 360
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS +DRSAPLPS+ +
Sbjct: 361 IDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASS 420
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+LG SGE++EN DL + N TIKTSPKMKLLWERAIDSNKAL+LDEIGLAPD++LE+V
Sbjct: 421 NDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERV 480
Query: 481 EEFERISQANEHSYPALILSNEE-----ESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFERISQA EHSYPA I S+EE +SPE+QD+SEA+Y+S DDD +EEDLF VDP
Sbjct: 481 EEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNS-DDDVGREEDLFDNVDP 540
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLS E
Sbjct: 541 LVPLGSLPVDIIAKKLSSE 556
BLAST of Sed0022733 vs. NCBI nr
Match:
ADN33825.1 (RNA splicing factor [Cucumis melo subsp. melo] >KAA0034302.1 RNA splicing factor [Cucumis melo var. makuwa])
HSP 1 Score: 926.0 bits (2392), Expect = 1.5e-265
Identity = 471/559 (84.26%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MA IPSLPGL LFSSLPS PPP +PS TSSPSTPIPIPKYPPPKSRTLRT NPPK+ N
Sbjct: 48 MATIPSLPGLTLFSSLPS--APPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPN 107
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRSKYYKPVKDGVISS+G+RAVV+G+SGVSYLLP APFEFQYSYSETP VKPI
Sbjct: 108 PALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPI 167
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 168 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLG 227
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 228 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 287
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 288 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 347
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 348 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 407
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS +DRSAPLPS+ +
Sbjct: 408 IDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASS 467
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+LG SGE++EN DL + N TIKTSPKMKLLWERAIDSNKAL+LDEIGLAPD++LE+V
Sbjct: 468 NDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERV 527
Query: 481 EEFERISQANEHSYPALILSNEE-----ESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFERISQA EHSYPA I S+EE +SPE+QD+SEA+Y+S DDD +EEDLF VDP
Sbjct: 528 EEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNS-DDDVGREEDLFDNVDP 587
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLS E
Sbjct: 588 LVPLGSLPVDIIAKKLSSE 603
BLAST of Sed0022733 vs. ExPASy Swiss-Prot
Match:
Q9LDA9 (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g23400 PE=2 SV=1)
HSP 1 Score: 679.9 bits (1753), Expect = 2.5e-194
Identity = 362/565 (64.07%), Postives = 427/565 (75.58%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPK-------SRTLRTN 60
MA + SL +NLFSSLPS PP S T P+ PIPIPKY P + TN
Sbjct: 1 MAIVASLRDINLFSSLPS-TPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTN 60
Query: 61 PPK-NLNPALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSE 120
P K NPALK H R++YYKPVK+GVISS GDR +++G+SGVSY LP APFEFQ+SYSE
Sbjct: 61 PKKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSE 120
Query: 121 TPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRP---DSEAKKLEM 180
TPKVKP+ IREPAF+PFAPPTMPRPWTGKAPLK SK KIPL DSFN P S K +EM
Sbjct: 121 TPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEM 180
Query: 181 PPWTGSISLGKYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLEL 240
P G + G+YPKE +REE+LGEPLK WE ML+KPH+ NRQVNLGRDG THNMLEL
Sbjct: 181 P---GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLEL 240
Query: 241 IHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 300
IHSHWK +RVCKVRCKGVPTVDM N+C LEEKTGG+IIHRVGGV+YLFRGRNYNYRTRP
Sbjct: 241 IHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRP 300
Query: 301 QYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVR 360
QYP+MLWKPAAPVYPKLIQE P+GLTKEEA+E R+KGK+L PICKL+KNGVY+SLV DVR
Sbjct: 301 QYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVR 360
Query: 361 HAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDR 420
AFE S LVKVDC G+ SDYKK+GAKLKELVPCVLLSFD+EQILMWRG++WKS ++
Sbjct: 361 DAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNP 420
Query: 421 SAPLPSQVRTKDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIG 480
P S+ T + L S + E + T N T +SPKM LW+RA++S+KA++L+E+
Sbjct: 421 LIPSLSETNTTNELDPSDKPSE--EQTVANPSTTISSPKMISLWQRALESSKAVILEELD 480
Query: 481 LAPDDILEKVEEFERISQANEHSYPALILSNEEESPEN----QDYSEADYSSNDDDEDQE 540
L PDD+L+KVEE E S A EH+Y A++LSN + + E+ +D SE YS DDD D E
Sbjct: 481 LGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSDIDDDFDDE 540
Query: 541 --EDLFVDPSVPLGSLPVDIIAKKL 549
+D +DP P+GSLPVD I +KL
Sbjct: 541 CSDDESLDPVGPVGSLPVDKIVRKL 559
BLAST of Sed0022733 vs. ExPASy Swiss-Prot
Match:
Q657G7 (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0323300 PE=3 SV=1)
HSP 1 Score: 540.4 bits (1391), Expect = 2.3e-152
Identity = 304/600 (50.67%), Postives = 397/600 (66.17%), Query Frame = 0
Query: 5 PSLPG-LNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRTNPPKNL----- 64
PS G NLFSS P PP P DP P+P + P R PP
Sbjct: 11 PSRAGRANLFSS-PPPPLPNCYDPKHRRPAPPPLPSARRLPSNRRRRHDQPPNPTTGNGG 70
Query: 65 NPALKTFHRRSKYYKPVKDGVISSHGD-------------RAVVLGESGVSYLLPDAPFE 124
NPA + H R+ Y KPV + G+ RAVV+G SG+S+ LP APF+
Sbjct: 71 NPAFRAPHLRTAYRKPVPPVAAAGEGEALLAADASDAADGRAVVVGPSGLSFRLPGAPFD 130
Query: 125 FQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKVK---------IPLLDS 184
F++SYSE P+ P+AIREPAFLPFAPPTMPRPWTGKAPL + + K PL +
Sbjct: 131 FRFSYSECPRAPPVAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGEE 190
Query: 185 FNRPDSEAKKLEMPPWTGSISLGKY-PKETKSREEILGEPLKNWEIRMLVKPHLSHNRQV 244
R S + + L + P + +SREE+LGEPL E+R LVKPH+SHNRQ+
Sbjct: 191 APRTVSAHGIMMEVRGRRKLDLARVSPGDGRSREEVLGEPLTAAEVRDLVKPHISHNRQL 250
Query: 245 NLGRDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVL 304
N+GRDGLTHNMLE+IH HW+ Q +CKVRC+GVPTVDM+N+C+HLEEK+GGK+IHRVGGV+
Sbjct: 251 NIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVV 310
Query: 305 YLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKL 364
+L+RGRNYN RTRP+YP+MLWKPA PVYPKLIQEAP+GLTKEEA+E+R +GK+LLPICKL
Sbjct: 311 FLYRGRNYNPRTRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEADEMRRRGKDLLPICKL 370
Query: 365 AKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILM 424
AKNG+YI LV DVR AFEGS LVK+DC G++ SDYKK+GAKL++LVPCVLLSFDNEQILM
Sbjct: 371 AKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILM 430
Query: 425 WRGKDWKSATPEDRSAPLPSQVRTKDALGLSGETIENGDLTHDNRPTIK--TSPKMKLLW 484
+RGK+WKS P + L ++R + S E+ + D+R ++ PKM LW
Sbjct: 431 FRGKEWKSRYP--KPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELW 490
Query: 485 ERAIDSNKALLLDEI---GLAPDDILEKVEEFERISQANEHSYPALILSNEEESPE--NQ 544
AI+S+ AL+LD+ L PD +L +VE+F SQ EHS+PA++++N+E +P+ N
Sbjct: 491 TNAIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNA 550
Query: 545 DYSE---------------ADYSSNDDDEDQEEDLF--VDPSVPLGSLPVDIIAKKLSPE 552
+Y+E + S +D+ E+D+ ++ SVPLG+LP+D + K+L+ E
Sbjct: 551 EYTEDEPETGTLEPQQHEFTESSDVAEDDHFEDDMLKRLESSVPLGALPIDAVVKQLNDE 607
BLAST of Sed0022733 vs. ExPASy Swiss-Prot
Match:
Q84N48 (CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1)
HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-146
Identity = 297/612 (48.53%), Postives = 394/612 (64.38%), Query Frame = 0
Query: 20 PPPPPQDPSST--------SSPSTPIPIPKYPPPKSRTL------RTNPPKN-------- 79
PPPPPQ P+S+ S+ P+ +YP +S L R +P K+
Sbjct: 2 PPPPPQRPASSHVGRANLFSASPPPLSNRRYPHHRSLPLPPVSPRRRDPKKHSQQPSQEE 61
Query: 80 -----------LNPALKTFHRRSKYYKPVKDGVISSHGD-------------RAVVLGES 139
NPA + H R+ Y KPV + G+ RAVV+G S
Sbjct: 62 PTDSGPTRTVTTNPAFRAAHLRTAYRKPVPPAAAAGEGEALLAADPTDAASGRAVVVGPS 121
Query: 140 GVSYLLPDAPFEFQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKVK--- 199
G+S+ LP APF+FQ+SYSE P+ P+AIREPAFLPFAPPTMPRPWTGKAPL + + K
Sbjct: 122 GLSFRLPGAPFDFQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARR 181
Query: 200 ------IPLLDSFNRPDSEAKKLEMPPWTGSISLGKY-PKETKSREEILGEPLKNWEIRM 259
PL + S + + L + P + +SREE+LGEPL E+R
Sbjct: 182 RGVRLHTPLGQETPQTVSAHGIMMEVRERRKMDLARVSPGDGRSREEVLGEPLTPSEVRA 241
Query: 260 LVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKT 319
LVKPH+SHNRQ+N+GRDGLTHNMLE+IH HW+ Q +CKVRC+GVPTVDM+N+C+HLEEK+
Sbjct: 242 LVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEEKS 301
Query: 320 GGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELR 379
GGK+IHRVGGV++L+RGR+Y+ +TRP+YP+MLWKPA PVYPKLI+EAPDG TKEEA+E+R
Sbjct: 302 GGKVIHRVGGVVFLYRGRHYDPKTRPRYPLMLWKPATPVYPKLIKEAPDGFTKEEADEMR 361
Query: 380 MKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPC 439
KG++LLPICKLAKNG+YI+LV DVR AFEGS LVK+DC G++ SDYKK+GAKL++LVPC
Sbjct: 362 RKGRDLLPICKLAKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPC 421
Query: 440 VLLSFDNEQILMWRGKDWKS--ATPEDRSAPLPSQVRTKDALGLSGETIENGDLTHDNRP 499
VLLSFD+EQILM RGK+WKS + P +P ++ S + + + + R
Sbjct: 422 VLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIRE 481
Query: 500 TIKTSPKMKLLWERAIDSNKALLLDEI---GLAPDDILEKVEEFERISQANEHSYPALIL 552
++ PKM LW+ A+DS+ ALLLD+ L PD +L VEEF SQA EHS+PAL++
Sbjct: 482 VLR--PKMFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLV 541
BLAST of Sed0022733 vs. ExPASy Swiss-Prot
Match:
Q9SL79 (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g20020 PE=2 SV=2)
HSP 1 Score: 416.8 bits (1070), Expect = 3.9e-115
Identity = 208/392 (53.06%), Postives = 265/392 (67.60%), Query Frame = 0
Query: 45 PKSRTLRTNPPKNLNPALKTFHRRSKYYKP------------VKDGVISSHGDRAVVLGE 104
PK+ R+ +L A RRSKY KP V D V L E
Sbjct: 80 PKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSE 139
Query: 105 SGVSYLLPDAPFEFQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIP 164
G++Y++ APFEF+YSY+ETPKVKP+ +REPA+ PF P TM RPWTG+APL S+
Sbjct: 140 DGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQKTPR 199
Query: 165 LLDSFNRPDSEAKKLEMPPWTGSISLGKYPKETKSREEILGEPLKNWEIRMLVKPHLSHN 224
DSF P K L+ G G P+ S+EEILGEPL E+R LV L
Sbjct: 200 EFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLKTT 259
Query: 225 RQVNLGRDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVG 284
RQ+N+GRDGLTHNML IH WK +RVCK++CKGV TVDM+N+C LEEK GGK+I+R G
Sbjct: 260 RQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRG 319
Query: 285 GVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPI 344
GVL+LFRGRNYN+RTRP++P+MLWKP APVYP+LIQ+ P+GLT++EA +R KG+ L+PI
Sbjct: 320 GVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPI 379
Query: 345 CKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQ 404
CKL KNGVY LV +V+ AFE LV++DC GM SD++K+GAKLK+LVPCVL+SF+NEQ
Sbjct: 380 CKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQ 439
Query: 405 ILMWRGKDWKSA-TPEDRSAPLPSQVRTKDAL 424
IL+WRG++WKS+ T D+ + + AL
Sbjct: 440 ILIWRGREWKSSLTTPDKKGDILEDIEVDTAL 471
BLAST of Sed0022733 vs. ExPASy Swiss-Prot
Match:
Q5VMQ5 (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0495900 PE=2 SV=1)
HSP 1 Score: 410.2 bits (1053), Expect = 3.6e-113
Identity = 203/383 (53.00%), Postives = 262/383 (68.41%), Query Frame = 0
Query: 25 QDPSSTSSPSTPIPIPKYPPPKSRTLRTNPPKNLNPALKTFHRRSKYYKPVKDGVISSHG 84
Q P S + + + + P + R P +PA + R P+ + + G
Sbjct: 16 QYPISRLPSNLRLSLSHHKQPAAVAKRRRAPAPSHPAFSSVIRGRPKKVPIPENGEPAAG 75
Query: 85 DRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPL 144
R E G++Y L APFEFQYSY+ETP+ +P+A+RE FLPF P PRPWTG+ PL
Sbjct: 76 VRVT---ERGLAYHLDGAPFEFQYSYTETPRARPVALREAPFLPFGPEVTPRPWTGRKPL 135
Query: 145 KSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLGKYPK-ETKSREEILGEPLKNWEIRM 204
S+ ++P DSF P K ++ G G P+ + SREE+LGEPL E+
Sbjct: 136 PKSRKELPEFDSFMLPPPGKKGVKPVQSPGPFLAGTEPRYQAASREEVLGEPLTKEEVDE 195
Query: 205 LVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKT 264
LVK L RQ+N+GRDGLTHNMLE IHSHWK +RVCK++CKGV TVDM+N+C LEEK
Sbjct: 196 LVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKV 255
Query: 265 GGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELR 324
GGK+IH GGV++LFRGRNYNYRTRP YP+MLWKPAAPVYP+L+++ PDGLT +EA ++R
Sbjct: 256 GGKVIHHQGGVIFLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMR 315
Query: 325 MKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPC 384
+G+ L PICKL KNGVY++LV VR AFE LV+VDC+G+++SD +K+GAKLK+LVPC
Sbjct: 316 KRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPC 375
Query: 385 VLLSFDNEQILMWRGKDWKSATP 407
LLSF+ E ILMWRG DWKS+ P
Sbjct: 376 TLLSFEFEHILMWRGNDWKSSLP 395
BLAST of Sed0022733 vs. ExPASy TrEMBL
Match:
A0A5A7ST68 (RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G003020 PE=4 SV=1)
HSP 1 Score: 926.0 bits (2392), Expect = 7.3e-266
Identity = 471/559 (84.26%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MA IPSLPGL LFSSLPS PPP +PS TSSPSTPIPIPKYPPPKSRTLRT NPPK+ N
Sbjct: 48 MATIPSLPGLTLFSSLPS--APPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPN 107
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRSKYYKPVKDGVISS+G+RAVV+G+SGVSYLLP APFEFQYSYSETP VKPI
Sbjct: 108 PALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPI 167
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 168 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLG 227
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 228 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 287
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 288 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 347
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 348 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 407
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS +DRSAPLPS+ +
Sbjct: 408 IDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASS 467
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+LG SGE++EN DL + N TIKTSPKMKLLWERAIDSNKAL+LDEIGLAPD++LE+V
Sbjct: 468 NDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERV 527
Query: 481 EEFERISQANEHSYPALILSNEE-----ESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFERISQA EHSYPA I S+EE +SPE+QD+SEA+Y+S DDD +EEDLF VDP
Sbjct: 528 EEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNS-DDDVGREEDLFDNVDP 587
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLS E
Sbjct: 588 LVPLGSLPVDIIAKKLSSE 603
BLAST of Sed0022733 vs. ExPASy TrEMBL
Match:
A0A5D3CUP7 (RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001140 PE=4 SV=1)
HSP 1 Score: 926.0 bits (2392), Expect = 7.3e-266
Identity = 471/559 (84.26%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MA IPSLPGL LFSSLPS PPP +PS TSSPSTPIPIPKYPPPKSRTLRT NPPK+ N
Sbjct: 1 MATIPSLPGLTLFSSLPS--APPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPN 60
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRSKYYKPVKDGVISS+G+RAVV+G+SGVSYLLP APFEFQYSYSETP VKPI
Sbjct: 61 PALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPI 120
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLG 180
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 181 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 240
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 241 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 301 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 360
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS +DRSAPLPS+ +
Sbjct: 361 IDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASS 420
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+LG SGE++EN DL + N TIKTSPKMKLLWERAIDSNKAL+LDEIGLAPD++LE+V
Sbjct: 421 NDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERV 480
Query: 481 EEFERISQANEHSYPALILSNEE-----ESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFERISQA EHSYPA I S+EE +SPE+QD+SEA+Y+S DDD +EEDLF VDP
Sbjct: 481 EEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNS-DDDVGREEDLFDNVDP 540
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLS E
Sbjct: 541 LVPLGSLPVDIIAKKLSSE 556
BLAST of Sed0022733 vs. ExPASy TrEMBL
Match:
E5GBI3 (RNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 926.0 bits (2392), Expect = 7.3e-266
Identity = 471/559 (84.26%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MA IPSLPGL LFSSLPS PPP +PS TSSPSTPIPIPKYPPPKSRTLRT NPPK+ N
Sbjct: 48 MATIPSLPGLTLFSSLPS--APPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPN 107
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRSKYYKPVKDGVISS+G+RAVV+G+SGVSYLLP APFEFQYSYSETP VKPI
Sbjct: 108 PALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPI 167
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 168 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLG 227
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 228 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 287
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 288 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 347
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 348 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 407
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS +DRSAPLPS+ +
Sbjct: 408 IDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASS 467
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+LG SGE++EN DL + N TIKTSPKMKLLWERAIDSNKAL+LDEIGLAPD++LE+V
Sbjct: 468 NDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERV 527
Query: 481 EEFERISQANEHSYPALILSNEE-----ESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFERISQA EHSYPA I S+EE +SPE+QD+SEA+Y+S DDD +EEDLF VDP
Sbjct: 528 EEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNS-DDDVGREEDLFDNVDP 587
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLS E
Sbjct: 588 LVPLGSLPVDIIAKKLSSE 603
BLAST of Sed0022733 vs. ExPASy TrEMBL
Match:
A0A1S3BF54 (CRS2-associated factor 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488994 PE=4 SV=1)
HSP 1 Score: 926.0 bits (2392), Expect = 7.3e-266
Identity = 471/559 (84.26%), Postives = 503/559 (89.98%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRT-NPPKNLN 60
MA IPSLPGL LFSSLPS PPP +PS TSSPSTPIPIPKYPPPKSRTLRT NPPK+ N
Sbjct: 56 MATIPSLPGLTLFSSLPS--APPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSPN 115
Query: 61 PALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPI 120
PALKTFHRRSKYYKPVKDGVISS+G+RAVV+G+SGVSYLLP APFEFQYSYSETP VKPI
Sbjct: 116 PALKTFHRRSKYYKPVKDGVISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPI 175
Query: 121 AIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLG 180
AIREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LG
Sbjct: 176 AIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLG 235
Query: 181 KYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRV 240
+YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRV
Sbjct: 236 QYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRV 295
Query: 241 CKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 300
CKVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA
Sbjct: 296 CKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPA 355
Query: 301 APVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVK 360
APVYPKLIQEAP+GLTKEEANELRMKGKNLLPICKLAKNGVYISLV+DVRHAFEGSILVK
Sbjct: 356 APVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVK 415
Query: 361 VDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRT 420
+DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS +DRSAPLPS+ +
Sbjct: 416 IDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASS 475
Query: 421 KDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKV 480
D+LG SGE++EN DL + N TIKTSPKMKLLWERAIDSNKAL+LDEIGLAPD++LE+V
Sbjct: 476 NDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERV 535
Query: 481 EEFERISQANEHSYPALILSNEE-----ESPENQDYSEADYSSNDDDEDQEEDLF--VDP 540
EEFERISQA EHSYPA I S+EE +SPE+QD+SEA+Y+S DDD +EEDLF VDP
Sbjct: 536 EEFERISQATEHSYPAFITSSEEVSSPADSPESQDHSEANYNS-DDDVGREEDLFDNVDP 595
Query: 541 SVPLGSLPVDIIAKKLSPE 552
VPLGSLPVDIIAKKLS E
Sbjct: 596 LVPLGSLPVDIIAKKLSSE 611
BLAST of Sed0022733 vs. ExPASy TrEMBL
Match:
A0A6J1K284 (CRS2-associated factor 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490390 PE=4 SV=1)
HSP 1 Score: 925.2 bits (2390), Expect = 1.2e-265
Identity = 473/558 (84.77%), Postives = 501/558 (89.78%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPKSRTLRTNPPKNLNP 60
MAR+PSLPGL+LFSSLPS PPP DPSSTS+PSTPIPIP+YPPPKSR LRTNPPK NP
Sbjct: 1 MARMPSLPGLHLFSSLPS--APPPHDPSSTSTPSTPIPIPRYPPPKSRILRTNPPKPPNP 60
Query: 61 ALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSETPKVKPIA 120
ALKTFHRRSKYYKPVKDGVISSHGDRAVV+G+SGVSYLLPDAPFEFQYSYSE PKVKPIA
Sbjct: 61 ALKTFHRRSKYYKPVKDGVISSHGDRAVVIGDSGVSYLLPDAPFEFQYSYSEIPKVKPIA 120
Query: 121 IREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRPDSEAKKLEMPPWTGSISLGK 180
IREPAFLPFAPPTMPRPWTGKAPLKSSK KIPL DSFN P K ++ G LGK
Sbjct: 121 IREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGK 180
Query: 181 YPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKGQRVC 240
YPKE KSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWK QRVC
Sbjct: 181 YPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVC 240
Query: 241 KVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAA 300
KVRCKGVPTVDM+NICHH+EEKTGGKIIHRVGGVLYLFRGRNYNYR+RPQYPVMLWKPAA
Sbjct: 241 KVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRSRPQYPVMLWKPAA 300
Query: 301 PVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 360
PVYPKLIQEAP+GLT EEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV
Sbjct: 301 PVYPKLIQEAPEGLTIEEANELRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKV 360
Query: 361 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDRSAPLPSQVRTK 420
DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKS ED SA LP QVRT
Sbjct: 361 DCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSDISEDVSATLPCQVRTN 420
Query: 421 DALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIGLAPDDILEKVE 480
D GE+IENGDL H N TIKTSPKMKLLWE+AIDSNKALLL+E+GLAPDD+LEKVE
Sbjct: 421 D-----GESIENGDLLHGNYHTIKTSPKMKLLWEKAIDSNKALLLNEMGLAPDDLLEKVE 480
Query: 481 EFERISQANEHSYPALILSNEEESP-----ENQDYSEADYSSNDDDEDQEEDLF--VDPS 540
EFERISQA EHSYPALI+S+E++S E+QD+ +++YSS DDDED E DLF V+PS
Sbjct: 481 EFERISQATEHSYPALIMSSEDDSSPDDTLESQDHDKSNYSS-DDDEDGEGDLFDNVNPS 540
Query: 541 VPLGSLPVDIIAKKLSPE 552
VP+GSLPVDIIAKKL PE
Sbjct: 541 VPMGSLPVDIIAKKLRPE 550
BLAST of Sed0022733 vs. TAIR 10
Match:
AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )
HSP 1 Score: 679.9 bits (1753), Expect = 1.7e-195
Identity = 362/565 (64.07%), Postives = 427/565 (75.58%), Query Frame = 0
Query: 1 MARIPSLPGLNLFSSLPSPPPPPPQDPSSTSSPSTPIPIPKYPPPK-------SRTLRTN 60
MA + SL +NLFSSLPS PP S T P+ PIPIPKY P + TN
Sbjct: 1 MAIVASLRDINLFSSLPS-TPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTN 60
Query: 61 PPK-NLNPALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDAPFEFQYSYSE 120
P K NPALK H R++YYKPVK+GVISS GDR +++G+SGVSY LP APFEFQ+SYSE
Sbjct: 61 PKKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSE 120
Query: 121 TPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIPLLDSFNRP---DSEAKKLEM 180
TPKVKP+ IREPAF+PFAPPTMPRPWTGKAPLK SK KIPL DSFN P S K +EM
Sbjct: 121 TPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEM 180
Query: 181 PPWTGSISLGKYPKETKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLEL 240
P G + G+YPKE +REE+LGEPLK WE ML+KPH+ NRQVNLGRDG THNMLEL
Sbjct: 181 P---GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLEL 240
Query: 241 IHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLFRGRNYNYRTRP 300
IHSHWK +RVCKVRCKGVPTVDM N+C LEEKTGG+IIHRVGGV+YLFRGRNYNYRTRP
Sbjct: 241 IHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRP 300
Query: 301 QYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKNGVYISLVNDVR 360
QYP+MLWKPAAPVYPKLIQE P+GLTKEEA+E R+KGK+L PICKL+KNGVY+SLV DVR
Sbjct: 301 QYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVR 360
Query: 361 HAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSATPEDR 420
AFE S LVKVDC G+ SDYKK+GAKLKELVPCVLLSFD+EQILMWRG++WKS ++
Sbjct: 361 DAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNP 420
Query: 421 SAPLPSQVRTKDALGLSGETIENGDLTHDNRPTIKTSPKMKLLWERAIDSNKALLLDEIG 480
P S+ T + L S + E + T N T +SPKM LW+RA++S+KA++L+E+
Sbjct: 421 LIPSLSETNTTNELDPSDKPSE--EQTVANPSTTISSPKMISLWQRALESSKAVILEELD 480
Query: 481 LAPDDILEKVEEFERISQANEHSYPALILSNEEESPEN----QDYSEADYSSNDDDEDQE 540
L PDD+L+KVEE E S A EH+Y A++LSN + + E+ +D SE YS DDD D E
Sbjct: 481 LGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSDIDDDFDDE 540
Query: 541 --EDLFVDPSVPLGSLPVDIIAKKL 549
+D +DP P+GSLPVD I +KL
Sbjct: 541 CSDDESLDPVGPVGSLPVDKIVRKL 559
BLAST of Sed0022733 vs. TAIR 10
Match:
AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )
HSP 1 Score: 416.8 bits (1070), Expect = 2.8e-116
Identity = 208/392 (53.06%), Postives = 265/392 (67.60%), Query Frame = 0
Query: 45 PKSRTLRTNPPKNLNPALKTFHRRSKYYKP------------VKDGVISSHGDRAVVLGE 104
PK+ R+ +L A RRSKY KP V D V L E
Sbjct: 80 PKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSE 139
Query: 105 SGVSYLLPDAPFEFQYSYSETPKVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKVKIP 164
G++Y++ APFEF+YSY+ETPKVKP+ +REPA+ PF P TM RPWTG+APL S+
Sbjct: 140 DGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQKTPR 199
Query: 165 LLDSFNRPDSEAKKLEMPPWTGSISLGKYPKETKSREEILGEPLKNWEIRMLVKPHLSHN 224
DSF P K L+ G G P+ S+EEILGEPL E+R LV L
Sbjct: 200 EFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLKTT 259
Query: 225 RQVNLGRDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVG 284
RQ+N+GRDGLTHNML IH WK +RVCK++CKGV TVDM+N+C LEEK GGK+I+R G
Sbjct: 260 RQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRG 319
Query: 285 GVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPI 344
GVL+LFRGRNYN+RTRP++P+MLWKP APVYP+LIQ+ P+GLT++EA +R KG+ L+PI
Sbjct: 320 GVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPI 379
Query: 345 CKLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQ 404
CKL KNGVY LV +V+ AFE LV++DC GM SD++K+GAKLK+LVPCVL+SF+NEQ
Sbjct: 380 CKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQ 439
Query: 405 ILMWRGKDWKSA-TPEDRSAPLPSQVRTKDAL 424
IL+WRG++WKS+ T D+ + + AL
Sbjct: 440 ILIWRGREWKSSLTTPDKKGDILEDIEVDTAL 471
BLAST of Sed0022733 vs. TAIR 10
Match:
AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )
HSP 1 Score: 275.8 bits (704), Expect = 7.6e-74
Identity = 154/370 (41.62%), Postives = 214/370 (57.84%), Query Frame = 0
Query: 43 PPPKSRTLRTNPPKNLNPALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDA 102
PPP S + NP + N + Y+P GV + D
Sbjct: 40 PPPLSSSASENP--DFNQKNNNKKKPKPQYRPPS--------------SLEGVKTVHSDL 99
Query: 103 PFEFQYSYSET-PKVKPIAIREPAFLPFAPPTMPRPWTGK-APLKSSKVKIPLLDSFNRP 162
PF+F++SY+E+ V+PI +REP + PF P + R WTG AP + KV+ +D P
Sbjct: 100 PFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCAPAVNPKVE--SVDGVEDP 159
Query: 163 DSEAKKLEMPPWTGSISLGKYPKETKSREEILGEPLKNWEIRMLVK--PHLSHNRQVNLG 222
E K+ K RE+I G L E + LV+ RQVNLG
Sbjct: 160 KLEEKR------------------RKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLG 219
Query: 223 RDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLF 282
RDGLTHNML +++HWK +V+C GVPT+DM+N+ HLE+KT G+++ + G L L+
Sbjct: 220 RDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLY 279
Query: 283 RGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKN 342
RGRNY+ + RP+ P+MLWKP PVYP+LI+ DGL+ +E +R KG + + KLAKN
Sbjct: 280 RGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKN 339
Query: 343 GVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRG 402
G Y SLV VR AF S LV++DC G+ DYKK+GAKL++LVPC+L++FD EQ+++WRG
Sbjct: 340 GYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRG 373
Query: 403 KDWKSATPED 409
KD+K +D
Sbjct: 400 KDYKPPKEDD 373
BLAST of Sed0022733 vs. TAIR 10
Match:
AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )
HSP 1 Score: 268.9 bits (686), Expect = 9.3e-72
Identity = 132/306 (43.14%), Postives = 191/306 (62.42%), Query Frame = 0
Query: 98 LLPDAPFEFQYSYSET-PKVKPIAIREP-AFLPFAPPTMPRPWTGKAPLKSSKVKIPLLD 157
++ D PF+F+YSYSET P+++PI REP F PF P + R WTG L S ++
Sbjct: 73 VISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALASPEI------ 132
Query: 158 SFNRPDSEAKKLEMPPWTGSISLGKYPKETKSREEILGEPLKNWEIRMLVK--PHLSHNR 217
+ W + R +LGE L E+ L++ H R
Sbjct: 133 ------------DQSQW------------VEERARVLGETLTEDEVTELIERYRHSDCTR 192
Query: 218 QVNLGRDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGG 277
Q+NLG+ G+THNM++ IH+HWK +++C GVPT+DM+NIC HLEEK+GGKI++R
Sbjct: 193 QINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNIN 252
Query: 278 VLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPIC 337
+L L+RGRNY+ ++RP P+MLWKP P+YP+L++ DGL EE E+R +G + +
Sbjct: 253 ILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALM 312
Query: 338 KLAKNGVYISLVNDVRHAFEGSILVKVDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQI 397
KL +NGVY+++V VR FE +V++DCT + SD K++G KLKE+VPCV + F +EQI
Sbjct: 313 KLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQI 348
Query: 398 LMWRGK 400
++WRGK
Sbjct: 373 ILWRGK 348
BLAST of Sed0022733 vs. TAIR 10
Match:
AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )
HSP 1 Score: 185.7 bits (470), Expect = 1.0e-46
Identity = 115/304 (37.83%), Postives = 161/304 (52.96%), Query Frame = 0
Query: 43 PPPKSRTLRTNPPKNLNPALKTFHRRSKYYKPVKDGVISSHGDRAVVLGESGVSYLLPDA 102
PPP S + NP + N + Y+P GV + D
Sbjct: 40 PPPLSSSASENP--DFNQKNNNKKKPKPQYRPPS--------------SLEGVKTVHSDL 99
Query: 103 PFEFQYSYSET-PKVKPIAIREPAFLPFAPPTMPRPWTGK-APLKSSKVKIPLLDSFNRP 162
PF+F++SY+E+ V+PI +REP + PF P + R WTG AP + KV+ +D P
Sbjct: 100 PFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCAPAVNPKVE--SVDGVEDP 159
Query: 163 DSEAKKLEMPPWTGSISLGKYPKETKSREEILGEPLKNWEIRMLVK--PHLSHNRQVNLG 222
E K+ K RE+I G L E + LV+ RQVNLG
Sbjct: 160 KLEEKR------------------RKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLG 219
Query: 223 RDGLTHNMLELIHSHWKGQRVCKVRCKGVPTVDMENICHHLEEKTGGKIIHRVGGVLYLF 282
RDGLTHNML +++HWK +V+C GVPT+DM+N+ HLE+KT G+++ + G L L+
Sbjct: 220 RDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLY 279
Query: 283 RGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPDGLTKEEANELRMKGKNLLPICKLAKN 342
RGRNY+ + RP+ P+MLWKP PVYP+LI+ DGL+ +E +R KG L + L K
Sbjct: 280 RGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKG---LAVPALTKL 304
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038892001.1 | 1.2e-267 | 84.97 | CRS2-associated factor 2, chloroplastic [Benincasa hispida] | [more] |
XP_023542721.1 | 8.8e-266 | 84.79 | CRS2-associated factor 2, chloroplastic [Cucurbita pepo subsp. pepo] | [more] |
XP_008446191.1 | 1.5e-265 | 84.26 | PREDICTED: CRS2-associated factor 2, chloroplastic [Cucumis melo] | [more] |
TYK15617.1 | 1.5e-265 | 84.26 | RNA splicing factor [Cucumis melo var. makuwa] | [more] |
ADN33825.1 | 1.5e-265 | 84.26 | RNA splicing factor [Cucumis melo subsp. melo] >KAA0034302.1 RNA splicing factor... | [more] |
Match Name | E-value | Identity | Description | |
Q9LDA9 | 2.5e-194 | 64.07 | CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g2... | [more] |
Q657G7 | 2.3e-152 | 50.67 | CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947... | [more] |
Q84N48 | 1.1e-146 | 48.53 | CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1 | [more] |
Q9SL79 | 3.9e-115 | 53.06 | CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g2... | [more] |
Q5VMQ5 | 3.6e-113 | 53.00 | CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7ST68 | 7.3e-266 | 84.26 | RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G0... | [more] |
A0A5D3CUP7 | 7.3e-266 | 84.26 | RNA splicing factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G0... | [more] |
E5GBI3 | 7.3e-266 | 84.26 | RNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A1S3BF54 | 7.3e-266 | 84.26 | CRS2-associated factor 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488994 ... | [more] |
A0A6J1K284 | 1.2e-265 | 84.77 | CRS2-associated factor 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490... | [more] |
Match Name | E-value | Identity | Description | |
AT1G23400.1 | 1.7e-195 | 64.07 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
AT2G20020.1 | 2.8e-116 | 53.06 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
AT4G31010.1 | 7.6e-74 | 41.62 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
AT5G54890.1 | 9.3e-72 | 43.14 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |
AT4G31010.2 | 1.0e-46 | 37.83 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | [more] |