Sed0022694 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTAATCATCGTACAACCCGAAATGTTTGTGTTCTTGTTTTTGTTTGGTTGTTGTGTAATTTAATTGGGTTACTGTGGTTCGGGATGTACAGGATTACTACTACCGGAGAAACTACATTCCGGCGTTTGGCAACTGGGAATGGAATGACCATCTCCCCTTCTCCCAATGCTTCGAATCTTCCACCGTCGCCGCTTATCCCGACGTCGGCGATCTTTACGTCGCCGGCGATTTGTACCAAAACGACGTCGTTACCCCCGCCGTCATCGTCGTTCCCCGCCACCACAGGGTAACGCTTTTTTATTTTTTATTGTAGACTTTCATTTTCATTTTTTCTAACAAAAAATTGTTTTCTCCTCATTTTTACTTATTTCAATTACTCAGTTTTTTCAAAAAATATAAATTAAGGGAGGGAACACAATACATATAAATCCTTAAAACGGTAAACGTTGAAGCTGGAGTTGAATTGAATTACCCATTATATTTTGAATTAATTTTAATTATATTCATTAAAGGTCAATGATGCATTTGGTTATCTTGTCTGTGTTAATCTATTTTAACTCACGATCAAAAAATTATTATTTGACTTTCGTATTATTTGAGAGTAACTGTATCTTCTGCGCAGGATTTATTAGTCCTCTTTCCCCTACTTTGTGTTACAAAAAAAATTATATTTAAAATTTTGACTTTTTTTGTTTTTTTGTTAGTGTTTGGGTGAATGTAGGCTCAATGGCTCATTTCTATTAGTGTTGTTGACACTTCATTCTAAATTGTTTTAAATATAAATTATTTGGAAAAATAAAAATAAAAATAAGATTTTTTTTTTAAAAAAGGAGAAAAATGAGTGGATCCACATGAACATCCTTCGTGTGATTCATATCTAGAGGATTCTTTTTTCCACCTTTAAGCATGCTTTGCTTTTTTTTTCTTTTTTTTTCCTTTCAACTAAGGAAAAAAAAAAGTGTAGCCGCGTGATCGCCACGTGACTTTACATAATTTCTAAACAAAAGTGTTCTTTTTTAGCATTAAAATAAAATTAGATATCAATTATCAGTGAGTTTAGCTTCAAGTTTTTTTAATTTTTAGTTAACAACATAAATTAAAATCAAATTCTTTGAACAAATCTTCTTTTTATGCATATGGGTTTCTTCCATTTCCGAATAGTTGGGTGAGACATTATTGTTTTAGAAACTTGGAGAAGTGAACAAAGGCAAATCTTGAAATTTCATACAATAATGGGTTTACTATTTTAAGAGAGAAAAGAACCTCTTTTTTTTTCTTGAAGTTTTAATGTTAGAAACCATGTTGTACTAGATTACTACTTTTTATCAAAGATGTGATTTTACATGGATATTCACACTTTTTTCATTAGATGCCTAAATTAGAGATCTAAAAAAAAAAAAACCTAAATTAGATAGAATTTTTTTTTAATTTTAGATTTCATTTGATATATTATATATATATATATATATATATATATATATATATATATATATATATATATGGTAAGAGAGATATGACAAGGGCACATGGGGGGTGAGGAAAAGAAAAACAGAGAATGATGATTGGTGTGGAGAGGGGTAATTAAAAAAAATGGAATTATAATACATAATTATAGATTGTATTTTTTAAATAAATGAAATTAAATGGGGGGTGCGGGTGACGGATGAAATTGCAGAGGAAGCGTGACAGGCAGGGGAAGCAAGCAAAAAAGGAAAAATGGATGAAAATGAATGAAAATGACAGCTCACCGCCAGCTGTAATAATGCCACGTCATCATCATCATCGCCCAAAGCCAAGGCCTAAACCTGTTGATGAAGACTTGTACAAAATTTCCCCTGAACTCTTAGCCAAGTCCAGAAAGGTCTTTTCCCACTTTCCTTTTTTATTTAAATTTTTTTAATATCAAAGTCACTTTATTACAGTCTCTTTTTCTCTCTCTCTCTCTCTCTCACTCAAAGCTATTGCTTTAGAAAATAATATGATATTTTTCTATTTCAGTTTACATTACTGAATTTTGTTTATTGCTTTTACAAATTATTCAAGCTTGAATTTTTTTAGTTTACATTTATTTATAAATAAACTTCCATTTGGTAACACATTTTTTATTTTTTCTTAAATCTATTGACTTTAACTACAGCAATAATAATAATAATAATAATTCGGTGACTACTTATGTCCTTAAACAAAATGATAATGAACTTGAATTTTCTATCTCTTGTTATTGTTACATTTTAAAAACATTTTAATCTTTACTTTTTAATTTCTTTAAATTATAGCCATGTTGTTGAAAATAATTTGAGTTAGAGGTTAATAATTACCATGTTAATAATATTACAAATTTAATGTTCTTAAGGGACAGCCTAGCGGTTGAGACTAAAGACTTCAAGACATACTTTTTTTAGAAATTTTTAATTCAAGATTATTGAAAAGCACCAGGCTAAGAAGCTCTCAATTCTCGATTTTCAAAAACAAAAAAAAATTACAAATTTGATGAACTTGTTTGGACATTCCTATATATATAAGGAAAAGAAAAGAAAATATTTTAAATAGTACATTATATTTAAAATCACAAAGTGGGTATGGGTTGTTTTTGTTTTTTTTTTTTTGGCTAAGATTTCTCTCTTTTTTCTTATATATTATTTAGATTGTGAATTAAATATATTCACATATGTGATTTGGTTTATTTGCAGAAAAGAGGGCTCAGTTACATAACAAACTGCTTTGTGCCAACATGTTTGGTTTGA ATGGAGGATTACTACTACCGGAGAAACTACATTCCGGCGTTTGGCAACTGGGAATGGAATGACCATCTCCCCTTCTCCCAATGCTTCGAATCTTCCACCGTCGCCGCTTATCCCGACGTCGGCGATCTTTACGTCGCCGGCGATTTGTACCAAAACGACGTCGTTACCCCCGCCGTCATCGTCGTTCCCCGCCACCACAGGAGGAAGCGTGACAGGCAGGGGAAGCAAGCAAAAAAGGAAAAATGGATGAAAATGAATGAAAATGACAGCTCACCGCCAGCTGTAATAATGCCACGTCATCATCATCATCGCCCAAAGCCAAGGCCTAAACCTGTTGATGAAGACTTGTACAAAATTTCCCCTGAACTCTTAGCCAAGTCCAGAAAGAAAAGAGGGCTCAGTTACATAACAAACTGCTTTGTGCCAACATGTTTGGTTTGA ATGGAGGATTACTACTACCGGAGAAACTACATTCCGGCGTTTGGCAACTGGGAATGGAATGACCATCTCCCCTTCTCCCAATGCTTCGAATCTTCCACCGTCGCCGCTTATCCCGACGTCGGCGATCTTTACGTCGCCGGCGATTTGTACCAAAACGACGTCGTTACCCCCGCCGTCATCGTCGTTCCCCGCCACCACAGGAGGAAGCGTGACAGGCAGGGGAAGCAAGCAAAAAAGGAAAAATGGATGAAAATGAATGAAAATGACAGCTCACCGCCAGCTGTAATAATGCCACGTCATCATCATCATCGCCCAAAGCCAAGGCCTAAACCTGTTGATGAAGACTTGTACAAAATTTCCCCTGAACTCTTAGCCAAGTCCAGAAAGAAAAGAGGGCTCAGTTACATAACAAACTGCTTTGTGCCAACATGTTTGGTTTGA MEDYYYRRNYIPAFGNWEWNDHLPFSQCFESSTVAAYPDVGDLYVAGDLYQNDVVTPAVIVVPRHHRRKRDRQGKQAKKEKWMKMNENDSSPPAVIMPRHHHHRPKPRPKPVDEDLYKISPELLAKSRKKRGLSYITNCFVPTCLV Homology
BLAST of Sed0022694 vs. NCBI nr
Match: XP_038899118.1 (uncharacterized protein LOC120086508 [Benincasa hispida]) HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54 Identity = 111/147 (75.51%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of Sed0022694 vs. NCBI nr
Match: XP_004150335.2 (uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical protein Csa_016635 [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 7.7e-52 Identity = 107/147 (72.79%), Postives = 119/147 (80.95%), Query Frame = 0
BLAST of Sed0022694 vs. NCBI nr
Match: XP_023550147.1 (uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.6 bits (540), Expect = 2.3e-51 Identity = 104/146 (71.23%), Postives = 117/146 (80.14%), Query Frame = 0
BLAST of Sed0022694 vs. NCBI nr
Match: XP_022960043.1 (uncharacterized protein LOC111460910 [Cucurbita moschata] >XP_023004237.1 uncharacterized protein LOC111497631 [Cucurbita maxima] >KAG6593050.1 hypothetical protein SDJN03_12526, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025458.1 hypothetical protein SDJN02_11953 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 212.2 bits (539), Expect = 2.9e-51 Identity = 104/146 (71.23%), Postives = 117/146 (80.14%), Query Frame = 0
BLAST of Sed0022694 vs. NCBI nr
Match: XP_023548222.1 (uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo] >XP_023548223.1 uncharacterized protein LOC111806926 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.5 bits (524), Expect = 1.6e-49 Identity = 100/146 (68.49%), Postives = 113/146 (77.40%), Query Frame = 0
BLAST of Sed0022694 vs. ExPASy TrEMBL
Match: A0A0A0KA54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52 Identity = 107/147 (72.79%), Postives = 119/147 (80.95%), Query Frame = 0
BLAST of Sed0022694 vs. ExPASy TrEMBL
Match: A0A6J1KPV8 (uncharacterized protein LOC111497631 OS=Cucurbita maxima OX=3661 GN=LOC111497631 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51 Identity = 104/146 (71.23%), Postives = 117/146 (80.14%), Query Frame = 0
BLAST of Sed0022694 vs. ExPASy TrEMBL
Match: A0A6J1H7P4 (uncharacterized protein LOC111460910 OS=Cucurbita moschata OX=3662 GN=LOC111460910 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51 Identity = 104/146 (71.23%), Postives = 117/146 (80.14%), Query Frame = 0
BLAST of Sed0022694 vs. ExPASy TrEMBL
Match: A0A6J1GPL2 (uncharacterized protein LOC111455979 OS=Cucurbita moschata OX=3662 GN=LOC111455979 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.3e-49 Identity = 100/146 (68.49%), Postives = 114/146 (78.08%), Query Frame = 0
BLAST of Sed0022694 vs. ExPASy TrEMBL
Match: A0A6J1JQ37 (uncharacterized protein LOC111487931 OS=Cucurbita maxima OX=3661 GN=LOC111487931 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.9e-49 Identity = 97/146 (66.44%), Postives = 113/146 (77.40%), Query Frame = 0
BLAST of Sed0022694 vs. TAIR 10
Match: AT5G48500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 116.7 bits (291), Expect = 1.6e-26 Identity = 72/157 (45.86%), Postives = 93/157 (59.24%), Query Frame = 0
BLAST of Sed0022694 vs. TAIR 10
Match: AT5G18310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 7.6e-05 Identity = 39/148 (26.35%), Postives = 61/148 (41.22%), Query Frame = 0
BLAST of Sed0022694 vs. TAIR 10
Match: AT5G18310.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04 Identity = 43/162 (26.54%), Postives = 66/162 (40.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|