Sed0022691 (gene) Chayote v1

Overview


Name	Sed0022691
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG03: 15487939 .. 15488840 (+)
RNA-Seq Expression	Sed0022691
Synteny	Sed0022691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATTTCGGATCTGTTGTGAAAGGAAATGGCAGAGCCCCAAACTCGCGAAAGCTCAGCCAAAAATCCATCACTCTCACCACTCTTCCGCTCCTCTTTCGCCGCCGCCGCCGATCCAGATCCCGCCGACCATCCTCTACCACCGCTGGCCGTATCCGCCACCGTCAGCGCCGCCTCCGATCCCGGCGGCGCAGGCATCGAGGATCTCGATTTGATCCGAGAACCGAAACGGCGGAAGAAGCACTGTCCGACGGCGCTGGAGAATCTCGACGATCTCACGTCGGCTTCGAACTCAAGCTTCGCCTTCACCTTCGACACCAAATTCTGCGGATTCTCGGCGGAGATCACTCCGAAATTCGGATCGTTCAACTCGATCGCACAGGAGATCGAAACGAAGAAGGAAGAACAGTGCTCGGTTCTCGAATCCAAACATCGCGAAGAAGAAATCGAAGTTACCGATGCGTTGCTAGAAGCAATCGGAGGAGGAGATCTGGAATCTGTTAAGCGGATTGAAACAACAAATTCATTGTAATGTTGAAATCTCTCTTTCTCTCTCTATACATATCTACATACATCTCTCTCTCTGTGATTATGAAATTATTGTTGTTCGTTTCGTTCATCAATGGCGGCTCTGAAAACTGCGATAGGTTTAGGGTTAGGGTTAGGAGATGATCTGCTTGTATATTAGGGTTGAAATTACTCGGAAAGTTAAAAGTCGAATCAAAATCAAAATCAAGAACGAATTGAAGGAATTTGGTCAATTATGGAGATTAGGTTCATCAGTTCTGGTGATTTTTTTTTTTTTTTGAGTACATAGGAGAGATGGACAAATACCAATTCTCGAACTCAAATGTGTGACGCTGGTGTTGAACTGTTTTCCAATTAAATACTGAAATTATTGGG

mRNA sequence

AGAATTTCGGATCTGTTGTGAAAGGAAATGGCAGAGCCCCAAACTCGCGAAAGCTCAGCCAAAAATCCATCACTCTCACCACTCTTCCGCTCCTCTTTCGCCGCCGCCGCCGATCCAGATCCCGCCGACCATCCTCTACCACCGCTGGCCGTATCCGCCACCGTCAGCGCCGCCTCCGATCCCGGCGGCGCAGGCATCGAGGATCTCGATTTGATCCGAGAACCGAAACGGCGGAAGAAGCACTGTCCGACGGCGCTGGAGAATCTCGACGATCTCACGTCGGCTTCGAACTCAAGCTTCGCCTTCACCTTCGACACCAAATTCTGCGGATTCTCGGCGGAGATCACTCCGAAATTCGGATCGTTCAACTCGATCGCACAGGAGATCGAAACGAAGAAGGAAGAACAGTGCTCGGTTCTCGAATCCAAACATCGCGAAGAAGAAATCGAAGTTACCGATGCGTTGCTAGAAGCAATCGGAGGAGGAGATCTGGAATCTGTTAAGCGGATTGAAACAACAAATTCATTGTAATGTTGAAATCTCTCTTTCTCTCTCTATACATATCTACATACATCTCTCTCTCTGTGATTATGAAATTATTGTTGTTCGTTTCGTTCATCAATGGCGGCTCTGAAAACTGCGATAGGTTTAGGGTTAGGGTTAGGAGATGATCTGCTTGTATATTAGGGTTGAAATTACTCGGAAAGTTAAAAGTCGAATCAAAATCAAAATCAAGAACGAATTGAAGGAATTTGGTCAATTATGGAGATTAGGTTCATCAGTTCTGGTGATTTTTTTTTTTTTTTGAGTACATAGGAGAGATGGACAAATACCAATTCTCGAACTCAAATGTGTGACGCTGGTGTTGAACTGTTTTCCAATTAAATACTGAAATTATTGGG

Coding sequence (CDS)

ATGGCAGAGCCCCAAACTCGCGAAAGCTCAGCCAAAAATCCATCACTCTCACCACTCTTCCGCTCCTCTTTCGCCGCCGCCGCCGATCCAGATCCCGCCGACCATCCTCTACCACCGCTGGCCGTATCCGCCACCGTCAGCGCCGCCTCCGATCCCGGCGGCGCAGGCATCGAGGATCTCGATTTGATCCGAGAACCGAAACGGCGGAAGAAGCACTGTCCGACGGCGCTGGAGAATCTCGACGATCTCACGTCGGCTTCGAACTCAAGCTTCGCCTTCACCTTCGACACCAAATTCTGCGGATTCTCGGCGGAGATCACTCCGAAATTCGGATCGTTCAACTCGATCGCACAGGAGATCGAAACGAAGAAGGAAGAACAGTGCTCGGTTCTCGAATCCAAACATCGCGAAGAAGAAATCGAAGTTACCGATGCGTTGCTAGAAGCAATCGGAGGAGGAGATCTGGAATCTGTTAAGCGGATTGAAACAACAAATTCATTGTAA

Protein sequence

MAEPQTRESSAKNPSLSPLFRSSFAAAADPDPADHPLPPLAVSATVSAASDPGGAGIEDLDLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAQEIETKKEEQCSVLESKHREEEIEVTDALLEAIGGGDLESVKRIETTNSL

Homology

[Close]

BLAST of Sed0022691 vs. NCBI nr
Match: KAG6595438.1 (hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027436.1 hypothetical protein SDJN02_11449, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197.6 bits (501), Expect = 8.6e-47
Identity = 120/181 (66.30%), Postives = 132/181 (72.93%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFAAAADPDPADHPLPPLAVSATVSAASDPGGAGIEDL 60
           MAEPQTRE+ A+NPSLS L RSSF  AAD DPADHPL P AV+ TV+AASD     IED 
Sbjct: 1   MAEPQTRETFAQNPSLSILSRSSF-VAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDP 60

Query: 61  DLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAQEI 120
           DL+REPKRR KHCPTALENLD+LTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E 
Sbjct: 61  DLLREPKRR-KHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHET 120

Query: 121 ETKK---------------------EEQCSVLESKHREEEIEVTDALLEAIGGG--DLES 159
           ETKK                     EE+   ++ +  E+EI+VTDALLEAIG G   LES
Sbjct: 121 ETKKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGREGLES 179

[Close]

BLAST of Sed0022691 vs. NCBI nr
Match: KAG6604296.1 (hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034454.1 hypothetical protein SDJN02_04183, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-41
Identity = 117/185 (63.24%), Postives = 129/185 (69.73%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFAAAADPDPADHPLPPLAVSATVSAASDPGGAGIEDL 60
           MAEPQTRE+ A+NPSLSPL RSSF +AADPDP +  L P  ++  VSAA+D    GIED 
Sbjct: 1   MAEPQTRENFAQNPSLSPLSRSSF-SAADPDPGERSLVPTTLA--VSAAADFSDVGIEDP 60

Query: 61  DLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAQEI 120
           DLIREPKRR KHCP+ALENLD+LTSASNSSF FTFDTKFCG SAEITPKFGSFNSI  E+
Sbjct: 61  DLIREPKRR-KHCPSALENLDELTSASNSSFGFTFDTKFCGVSAEITPKFGSFNSIVSEM 120

Query: 121 E-TKKE--EQCSVLES------------------------KHREEEIEVTDALLEAIGGG 159
           E TKKE  EQ  VL+S                        +  EEE EV DALLEAI GG
Sbjct: 121 ESTKKEKKEQRLVLDSASKTRGDEEREESVNRGTEEEEEEEEEEEEKEVADALLEAIEGG 180

[Close]

BLAST of Sed0022691 vs. NCBI nr
Match: KGN54677.1 (hypothetical protein Csa_012626 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 5.6e-38
Identity = 106/161 (65.84%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFA-AAADPDPADHPLPPLAVSATVSAASDPGGAGIED 60
           MAEPQTRE+ A+N SLSPL RSSF+ AA DPDP D PL P AV            A +ED
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAV------------AVLED 60

Query: 61  LDLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAQE 120
            DLIREPKRR KHCPTALENLD+LTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E
Sbjct: 61  PDLIREPKRR-KHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPE 120

Query: 121 IE-----TKKEEQCSVLESKHR-----EEEIEVTDALLEAI 151
           +E      ++E +    ES H+     EEEI + DALLEAI
Sbjct: 121 MERNQKKAEREVRVEEEESVHKVEEEEEEEIGIADALLEAI 148

[Close]

BLAST of Sed0022691 vs. NCBI nr
Match: KAA0025819.1 (uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09637.1 uncharacterized protein E5676_scaffold447G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 6.4e-34
Identity = 97/142 (68.31%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFA-AAADPDPADHPLPPLAVSATVSAASDPGGAGIED 60
           MAEPQTRE+ A+N SLSPL RSSF+  A DPDP D PL P AV            A ++D
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAV------------APLQD 60

Query: 61  LDLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAQE 120
            DLIREPKRR KHCPTALENLD+LTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E
Sbjct: 61  PDLIREPKRR-KHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPE 120

Query: 121 IE--TKKEEQCSVLESKHREEE 140
           +E   KKEE+    E +  EEE
Sbjct: 121 MERNQKKEER----EVRVEEEE 125

[Close]

BLAST of Sed0022691 vs. NCBI nr
Match: OIT38761.1 (hypothetical protein A4A49_21018 [Nicotiana attenuata])

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-11
Identity = 66/169 (39.05%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFAAAADPDPADHPL---PPLAVSATVSAASDPGGAGI 60
           M EP+T +SSA N S+               PA H +   PP A  AT S    P     
Sbjct: 1   MEEPKTDQSSAANCSI---------------PAPHTVDDQPPQA--ATESCEEKPDK--- 60

Query: 61  EDLDLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSI 120
           ED D +R+PKRR K+CPTAL+  D + SA+N  F+F+FD+KF G S  E+TPKFGSFN +
Sbjct: 61  EDPDSLRQPKRR-KNCPTALDKFDSVNSATNLGFSFSFDSKFSGCSTPEVTPKFGSFNRV 120

Query: 121 AQEIETKKEEQCSVLESKHREEEIEVTDALLEAIGGGDLESVKRIETTN 166
             +  + K+ +    E K  +EE +  D + +    G L SV  I+T +
Sbjct: 121 KPKPVSSKDPKSEERELKEDDEERD--DVIEKKNSLGLLSSVDGIKTVD 146

[Close]

BLAST of Sed0022691 vs. ExPASy TrEMBL
Match: A0A0A0L245 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.7e-38
Identity = 106/161 (65.84%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFA-AAADPDPADHPLPPLAVSATVSAASDPGGAGIED 60
           MAEPQTRE+ A+N SLSPL RSSF+ AA DPDP D PL P AV            A +ED
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAV------------AVLED 60

Query: 61  LDLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAQE 120
            DLIREPKRR KHCPTALENLD+LTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E
Sbjct: 61  PDLIREPKRR-KHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPE 120

Query: 121 IE-----TKKEEQCSVLESKHR-----EEEIEVTDALLEAI 151
           +E      ++E +    ES H+     EEEI + DALLEAI
Sbjct: 121 MERNQKKAEREVRVEEEESVHKVEEEEEEEIGIADALLEAI 148

[Close]

BLAST of Sed0022691 vs. ExPASy TrEMBL
Match: A0A5D3CCB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00340 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.1e-34
Identity = 97/142 (68.31%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFA-AAADPDPADHPLPPLAVSATVSAASDPGGAGIED 60
           MAEPQTRE+ A+N SLSPL RSSF+  A DPDP D PL P AV            A ++D
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAV------------APLQD 60

Query: 61  LDLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAQE 120
            DLIREPKRR KHCPTALENLD+LTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E
Sbjct: 61  PDLIREPKRR-KHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPE 120

Query: 121 IE--TKKEEQCSVLESKHREEE 140
           +E   KKEE+    E +  EEE
Sbjct: 121 MERNQKKEER----EVRVEEEE 125

[Close]

BLAST of Sed0022691 vs. ExPASy TrEMBL
Match: A0A314LAG3 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_21018 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 9.7e-12
Identity = 66/169 (39.05%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFAAAADPDPADHPL---PPLAVSATVSAASDPGGAGI 60
           M EP+T +SSA N S+               PA H +   PP A  AT S    P     
Sbjct: 1   MEEPKTDQSSAANCSI---------------PAPHTVDDQPPQA--ATESCEEKPDK--- 60

Query: 61  EDLDLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSI 120
           ED D +R+PKRR K+CPTAL+  D + SA+N  F+F+FD+KF G S  E+TPKFGSFN +
Sbjct: 61  EDPDSLRQPKRR-KNCPTALDKFDSVNSATNLGFSFSFDSKFSGCSTPEVTPKFGSFNRV 120

Query: 121 AQEIETKKEEQCSVLESKHREEEIEVTDALLEAIGGGDLESVKRIETTN 166
             +  + K+ +    E K  +EE +  D + +    G L SV  I+T +
Sbjct: 121 KPKPVSSKDPKSEERELKEDDEERD--DVIEKKNSLGLLSSVDGIKTVD 146

[Close]

BLAST of Sed0022691 vs. ExPASy TrEMBL
Match: A0A3Q7JFM8 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101250353 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.8e-11
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 17  SPLFRSSFAAAADPDPADHPLPPLAVSATVSAASDPGGAGIEDLDLIREPKRRKKHCPTA 76
           +P    S  A ++ +  D P PP       +A S      IED D+IR+ KRR K+CP+A
Sbjct: 9   APAENCSDPAPSNSNSGDDPSPP------TTAESWEEKPEIEDPDIIRQAKRR-KNCPSA 68

Query: 77  LENLDDLTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIAQEIETKKEEQCSVLESKH 136
           L+  D + S SN  F+F+FD+KF G S  E+TPKFGSFN +        + + +VLE + 
Sbjct: 69  LDKFDSVNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSEETVLEVED 128

Query: 137 REEEIEVTDALLEAIGGGDLESVKRIETTN 166
            +EE E  D ++E    G L SV  I+T +
Sbjct: 129 EDEE-EKPDVVVEKNSLGLLSSVDGIKTVD 150

[Close]

BLAST of Sed0022691 vs. ExPASy TrEMBL
Match: M1CPV9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.3e-11
Identity = 59/169 (34.91%), Postives = 93/169 (55.03%), Query Frame = 0


Query: 1   MAEPQTRESSAKNPSLSPLFRSSFAAAADPDPADHPLPPLAVSATVSAASDPGGAGIEDL 60
           M  P++ ++ A+N         S  A ++ + +D PLP      + +A S      IED 
Sbjct: 1   MENPKSDQAPAEN--------CSDPAPSNSNSSDDPLP------STTAESWEEKPEIEDP 60

Query: 61  DLIREPKRRKKHCPTALENLDDLTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIAQE 120
           D++R+PKRR K+CP+AL+  D + S SN  F+F+FD+KF G S  E+TPKFGSFN +   
Sbjct: 61  DILRQPKRR-KNCPSALDKFDSVNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPG 120

Query: 121 IETKKEEQCSVLESKHR---EEEIEVTDALLEAIGGGDLESVKRIETTN 166
                + + +VLE +     +++ E  D ++E    G L SV  I+T +
Sbjct: 121 STKDPKSEETVLEEEDEDDDDDDEEKPDVVVEKNSMGLLSSVDGIKTVD 154

The following BLAST results are available for this feature:

BLAST of Sed0022691 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595438.1	8.6e-47	66.30	hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6604296.1	1.4e-41	63.24	hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN54677.1	5.6e-38	65.84	hypothetical protein Csa_012626 [Cucumis sativus]	[more]
KAA0025819.1	6.4e-34	68.31	uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09...	[more]
OIT38761.1	2.0e-11	39.05	hypothetical protein A4A49_21018 [Nicotiana attenuata]	[more]

BLAST of Sed0022691 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L245	2.7e-38	65.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1	[more]
A0A5D3CCB2	3.1e-34	68.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A314LAG3	9.7e-12	39.05	Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_21018 PE=4 SV=1	[more]
A0A3Q7JFM8	4.8e-11	38.67	Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101250353 PE=4 SV=1	[more]
M1CPV9	6.3e-11	34.91	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]

BLAST of Sed0022691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022691.1	Sed0022691.1	mRNA