Sed0022670 (gene) Chayote v1

Overview


Name	Sed0022670
Type	gene
Organism	Sechium edule (Chayote v1)
Description	plant-specific TFIIB-related protein 1
Location	LG14: 20575890 .. 20581985 (+)
RNA-Seq Expression	Sed0022670
Synteny	Sed0022670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAACTTTACTTAACCTAACAACCACGACGAAAAAGTATAAATGGCAGGCGATGCAGTTGGCTCAAATTCAATTGACCTACAAAATCGGAATGAAAGAATCCGAATCCGAATCTCCACCACCACTGTAACCAACGGCGGCGATGAAGTGCCCCTACTGCACGGCGGCGCAAGGGCGGTGCGCCACCACAAGCTCCGGCAAGTCCATCACGGAGTGCATTTCGTGCGGCCGCGTCGTCGAAGAGCGCCAATTCCTCCCCCACCACCTCTTCCACCTCCGCGCTCAAGACAACCCCCTCTGCCTCGTCACCTCCGACCTCCCATCGCCGCCGGTCCACCACCAGGGCGATCCGGTTCAGGACCCGTTCGAGCCTACCGGCTTCATCACCGCCTTCTCCACATGGTCGTTGGAGCACAATCCGCTGTTCTTCCGCTCCTCCTTCTCCTTCTCCGGCCACCTTGCCGAGCTCGAGCGAACCCTAGAGTCGACCTCATCGTCGAATCTGCCGTCGTCGTCGACGGTCGTGGTGGATAATCTTAGGGCTTATATGCAGATTATTGATGTGGCTTCTCTGTTAGGGTTGGATTACTATATTTCTGAGCACGCGTTTAAGTTGTTTAGGGATTGTTGTTCTGCTACTTGCTTGAGGAATCGGAGCGTTGAGGCGCTTGCTACTGCTGCTCTTGTTCAGGCTATTAGGGAGGCGCAGGAGCCTCGAACACTTCAGGTTATTGTTTCGCTTTAATCTCTGCGTTTGTTGCTTGATTTGTGGTTCTCTATGATGTGTTTTTGTGTTATCTCATTATGTTCATGAAGATTTTGGGGAGTTTCACTGAATAGATGAATTGAAAAATGTATACTGCTATGAGCACCATTGATCTTGTTCTTCAATACTTGGCGAGAGTGCAATATTTAAGATCCCGTTTGATAACTATTTGGTTTTAATTTTTTAAATTTAAGCTTATTTTTATTCAAATTCAAATTTCTTACTATGTGTTCCATCTTTTTCAAGAGAGTAGGTGAATGCTAACTAAACTATAAAAACAAAAACAAGATTTTGGAAGCTATTTTTTTTTATTTGGATTCTAAAAATATAGGTAAGAATAAGATATAGGCATACAAGTAAGTAAGAAAAAACATATGCAAGGAAGTTGTTGTAGAATTTCAAAAAATAAAAACAAAAAGGTTATCAAACGCGGCTTAACTTGACATTTCTTGAGTTATCCTTGCTTGTTCTACATATTCAGTCAATTGCCATCATTCTTCTAGTTCCCTTTATTGTTTTGGAGTGCTTAGTTTTCTCAGGTTAGAATGTAAAATTTGAAACCTCGTATATGCTGGTACAAGCCCCTTGAATTTTCAGTACTGTCTTTTACAAACTGTGATTTTAAGCTAGGGCTTAACCAACCATCACGGGCGGGTAACCTAGTGGTCAAAAGAGTGTTAAGAAACTAAAAAGGGGTGGGTTCAACTGTGGTAGCCTAGGATTTAATTTCCCATTAGTTTCTTAGACATTTAAAAATTATAAGGTCACGCGTTATGCCTTTGAGAATACTCAAGGTGCATGTAAGCTCGACCATACATTCACTGATTTAAAAAAAAAAACTATGCCTTAATCATCATTAGTTGACCTAGTGGTCTGTGAAACTAAAAGGGTGTGGAGGTTCAATTCATGGTAGTCATACCTATAAATTAATCATTTACGGGCTTCCTTGACAACCAAATGTTATAAAATCGGTTGGGTGGTTCGGTGAGAATAGTTGAGGTATGCATAAGTTGGTCCGGATGCTCACGGATATTAAAAATAAATTAAGCTATGCCTTGTTATCTTTACTCTCGTACTACTTCTACGACATCTAAAGTGGTTTATACTCTTGCGTACAACAGGAAATCTCTATTGCAGCAAATGTACCCCAAAAAGAAATTGGAAAGTACATCAAGATTTTGGGAGAAGCTTTGCAATTAAGTCAGCCCATCAATAGCAATTCCATATCAGTCCATATGCCAAGGTTCTGCACGCTTCTCCAACTCAATAAATCTGCTCAGGTACCTCAATTTCATTTTTTTGACTTGGTTAAGACATTTATTGGTTTGCATTTGTCATGTTCAAAGATTGTTATGTACATAGACCGTTGATTTTGTTCAATATGATCAAAACTCCATGCCTATGGGTTGAGAAAATGAAAAAGTATTGTCCCTTGATTGTAGGCAAAGAATGATGGAAAAATTTATTTGCACTTATATATCTTGAATGTTATTTTCAACTTATTTTCGCAACTAATCTTATTTGGTTTAATTGTAACGTGTCGACCAGATAATTTTGAATTTGCACAATATGATAATATTCATGTGTTTGTCCTAGTAAATTCTACTTCTACCATTGGCATCGACAGTTCTTCTTAGCTTGAAGAACTAGAATCTTCGGATATGGTAATGATCGTTAGTATGTTGCTGAATCATTATAAATCACCCATGAATCCAAAAACTTATGCGAATGAATTGAGATAAATTTAAGTATATCAACCAACATTCCCTTCATTATTGATCTTTAGTTGGAGATCCCTTTTGTAATTGAGCTATAGCCCCCTGTGTAATTTCATACCTATAATGAAATTGTTTCTTATAAAAAAAAACATTCCCCCAAGTCGGCCGTTCCTTCTTCACATTCTTGCATCCTAGATTCCATCTTAGTAGTAACCATTCCCGGATCGGCAAATGGCTTTGATACCAAAATGATAGAATCTATCACTTTATTAAGATAAATCTCTCGAGAGGATCTCTCAAAGAGCCCGAGTACAAAAGACGACAATTCAATTGGATGATTGACAATAACCTACAACTCCTATTTATAACCCTAAACCCTAATTTGACCTAATTAATAAAAGACTAATAATAGGCCCAAGCCCAATACATTTAAAATAGCAATTAACTAATAATTAATAAATACTAATATTCCTAAAATGCCAAGGCCGGATCGTATCAATACTTTCCCCCCCAAGAGCCACCTTGTCCTCAAGGTGTTCCATCTCCGATGCCATCTTTTACAGCCCCGTCTTCTGGCAAAATATCTGTCACATAAGCATCCTGACACTCGTGCGCATCCCGAACGACCCACACATCCAAGTTCTGGAGCTTCTTCTTCTGACAACGATGTCCTGGGACAAATTGTTCATCGCAGCGGAAGCATAACCCTTTGTCCTTCCTAGCTCGAATTTCGGCTTCAGTGAGTTTTTTACAAGACGTCGGGTGAACGGTTGTAGTCCTGTGGGACAAAATCTCTGTGCTTCCAGTTCCCGATACAATCGTTCCTGCTTTAGCCTTGACTGTTGCAGAAGTACTTCCCTCGTTTTGGGCAGCCTGAAAAGCAAAATCATCCTCAATCACTTGGGCCATAAACATTTTCTCTTCAATGCCCACTGGTCGTAGTTTACGCATCGCGCTCCGTATCTCCTCTTTCAGTCCACTTTCCCACTTCCCTTCCAATGCACTCATACTGATATCGCGCATTCCCTTAGCAAAGCGCTCAAAGCTCCGGCGATATTCCTTCACCGTTCCTATTTGCTTCAAACTCATGAAGTTGGCATACTTATTGGCCTGGGGCACCGGTTGGAAACGCTCCAACAACCCATCTTTGAATTCGTTCCAAGAACGAAAGGGGCACTGGTCCTCCTCATCACCAAGCCACTCCAATGCCTCCCCTTCTAAACATAACCCTGCTGCCTCAACCCCTTCATATTCAGTCAACTTGTTTACCAGGAAATAACGCTCGACCCGACTCAACCATCCTACTGGATCCTCATCAACAAGACCCTTGAAAATCGGCATCTCCAATTTTCTAAATCTCCTGTCACATCCCGGTCCCTCCCTTCCTCCTACTTTCTGACCTCCCCGTTCAAATATTTCTTCTCCTCCCCACCCGAAATCTCGTCCCCTACTTCGGACATTGTCACTCCACCCACGATCATTCCAACCGTCATGCGCCAACGACCTATCAAAGCCCATGCGCAACCTTCTCTCCTCCAAAACCCTGTTTTTTCTCTCCACGACCCTTGGATCCCCCCTTTGGCCGAACTCCGGTCCCTGTAAATCGTCAACTCAATTTCGGCCCCGATCGTTCCAACCGTCATGCGCTATCGGTCTGTCGAAACCAACACGCACTCTCCTCTCCTCTGGAAACCCGTTTCCCCCCCGGTCATTCCTAGGTTCTTCTCGTCGACCAAAATCCAGCCCCGTGCAAGTGTCCCCGTCAACATTCCCTTGAAATTCCACCCTTCAGTCCAACCTAACTGGCCCAACCCGACCCGGTCCAACCAGCTCACCCCGACTCGGCCCGCCTGAGCCTCGGCCCGGACCACCCACGCCGCCCACTCCCGGCTCTCCCCAGCCCACGCCCCGCGCGCGAGCACCCTCGGAGCTCCACGCCCCCACGCTGACGCGCCCGTCCGCACTCGTCCGCTTCCCCGCGCCCTCGCGCCCGTTCCTGCTCACCTCGCCCCCCTTGTCGAGACCGCCGTGTCTCCTGCTGGCCGGCCCGCCGCCTCGCAAACGCGGCGCCGCGCCGCGCCTCGCGCTTCCGACCCTTCTGTTGAAGCGTCGATTAATAAACCCTTCCCTTTGTTCGCTCGGAACGACTCCATCAACAACTCTAGATTCCGGTTGATGCTCTCGATTTTCAAATCTTGTGAATCCAACCTTTTTCCCAATCGTTCTTCCATCGCTTCCATCTTCGCATTAGTCTCTTGTAACTTTCTTGCCAAGTCGGTCGTTCCTTCTTCACATTCTTGCATCCTAGATTCCATCTTAGTAGTAACCATTCCCGGATGAGAAAATGGCTTTGATACCAAAATGATAGAATCTATCACTTTATTAAGATAAATCTCTCGAGAGGATCTCTCAAAGAGCCCGAGTACAAAAGACGACAATTCAATTGGATGATTGACAATGACCTACAACTCCTATTTATAACCCTAAACCCTAATTTGCCCTAATTAATAAAAGACTAATAATAGGCCCAAGCCCAATACATTTAAAATAGCAATTAACTAATAATTAATAAATACTAATATTCCTAAAATGCCAAGGCCGGATCGTATCAGATAAATTTAAGTATATCAACCAACATTGCCTTCATTATTGATCTTTAGTTGGAGATCCCTTTTGTAATTTAGCTATAGCCCCCTGTGTAATTTCATACCTATAATGAAATTGTTTCTTATAAAAAAAAAACATTCCCCCATTAGTGCACTTGAAGATTTTCATAATGCTCCATCAAGTTGAAATCAAGATTAATCTCTTACTATGATACCATGTTGTTGAATCATGTTAAATCAACAATCGACCCAAAAACTTAAACTAATAAGTTGAGGTAAATATAATTATATCAACCAACACATACGTTGCATTATTTTTCTCTCAATCGTGCTTGTTGACAACCACTATGAATTTTAGGAACTGGCGACACACATCGGGGAAGTTGTCATCAACAAATGCTTCTGCACGCGCAGGAATCCGATAAGTATCTCGGCGGCTGCCATATACTTAGCTTGCCAATTAGAAGACAAGCGAAAAACTCAAGCCGAAATTTGTAAGGTTACAGGTCTCACAGAAGTCACCCTGAGGAAAGTCTACAAAGAACTACTAGAAAACTGGGATGATTTGCTTCCATCTAATTACACTCCTGCTGTTCCTCCAGAAAGGGCATTTCCCACAACTTTAATTGCTTCAGGCCGCTCTGCTGCAGCTCCTAAAGCTGATGCATTTGAAGCAGCTTCTTCAGAGAAAGACAGGCTGATTGATTCTAAACCTAATTTATCTGCCGAGATCTCGGACATGGGTCCTCCATCTAGAGTTAAAGAAGATAGTGAGAGTAAATTCGTGTCTCGTGGAATGTATAGCCCTTCAGTTAACAAACCGTCGGCGTAAAGGTCGAATAAGGGCCATGTAAATTATAAGGTACTTTGAAGCTACGAGTTTGAAGCTCTCATTTATCTAAAATTTAATTTTCAACCGAGTTATAAAAAATGTAACTTTGTATCTTGCAAATCTGTAGTTATCTTAGTATATACTTATGTTAATTGAGGTATTGCTTGTTATGTA

mRNA sequence

GGAAACTTTACTTAACCTAACAACCACGACGAAAAAGTATAAATGGCAGGCGATGCAGTTGGCTCAAATTCAATTGACCTACAAAATCGGAATGAAAGAATCCGAATCCGAATCTCCACCACCACTGTAACCAACGGCGGCGATGAAGTGCCCCTACTGCACGGCGGCGCAAGGGCGGTGCGCCACCACAAGCTCCGGCAAGTCCATCACGGAGTGCATTTCGTGCGGCCGCGTCGTCGAAGAGCGCCAATTCCTCCCCCACCACCTCTTCCACCTCCGCGCTCAAGACAACCCCCTCTGCCTCGTCACCTCCGACCTCCCATCGCCGCCGGTCCACCACCAGGGCGATCCGGTTCAGGACCCGTTCGAGCCTACCGGCTTCATCACCGCCTTCTCCACATGGTCGTTGGAGCACAATCCGCTGTTCTTCCGCTCCTCCTTCTCCTTCTCCGGCCACCTTGCCGAGCTCGAGCGAACCCTAGAGTCGACCTCATCGTCGAATCTGCCGTCGTCGTCGACGGTCGTGGTGGATAATCTTAGGGCTTATATGCAGATTATTGATGTGGCTTCTCTGTTAGGGTTGGATTACTATATTTCTGAGCACGCGTTTAAGTTGTTTAGGGATTGTTGTTCTGCTACTTGCTTGAGGAATCGGAGCGTTGAGGCGCTTGCTACTGCTGCTCTTGTTCAGGCTATTAGGGAGGCGCAGGAGCCTCGAACACTTCAGGAAATCTCTATTGCAGCAAATGTACCCCAAAAAGAAATTGGAAAGTACATCAAGATTTTGGGAGAAGCTTTGCAATTAAGTCAGCCCATCAATAGCAATTCCATATCAGTCCATATGCCAAGGTTCTGCACGCTTCTCCAACTCAATAAATCTGCTCAGGAACTGGCGACACACATCGGGGAAGTTGTCATCAACAAATGCTTCTGCACGCGCAGGAATCCGATAAGTATCTCGGCGGCTGCCATATACTTAGCTTGCCAATTAGAAGACAAGCGAAAAACTCAAGCCGAAATTTGTAAGGTTACAGGTCTCACAGAAGTCACCCTGAGGAAAGTCTACAAAGAACTACTAGAAAACTGGGATGATTTGCTTCCATCTAATTACACTCCTGCTGTTCCTCCAGAAAGGGCATTTCCCACAACTTTAATTGCTTCAGGCCGCTCTGCTGCAGCTCCTAAAGCTGATGCATTTGAAGCAGCTTCTTCAGAGAAAGACAGGCTGATTGATTCTAAACCTAATTTATCTGCCGAGATCTCGGACATGGGTCCTCCATCTAGAGTTAAAGAAGATAGTGAGAGTAAATTCGTGTCTCGTGGAATGTATAGCCCTTCAGTTAACAAACCGTCGGCGTAAAGGTCGAATAAGGGCCATGTAAATTATAAGGTACTTTGAAGCTACGAGTTTGAAGCTCTCATTTATCTAAAATTTAATTTTCAACCGAGTTATAAAAAATGTAACTTTGTATCTTGCAAATCTGTAGTTATCTTAGTATATACTTATGTTAATTGAGGTATTGCTTGTTATGTA

Coding sequence (CDS)

ATGAAGTGCCCCTACTGCACGGCGGCGCAAGGGCGGTGCGCCACCACAAGCTCCGGCAAGTCCATCACGGAGTGCATTTCGTGCGGCCGCGTCGTCGAAGAGCGCCAATTCCTCCCCCACCACCTCTTCCACCTCCGCGCTCAAGACAACCCCCTCTGCCTCGTCACCTCCGACCTCCCATCGCCGCCGGTCCACCACCAGGGCGATCCGGTTCAGGACCCGTTCGAGCCTACCGGCTTCATCACCGCCTTCTCCACATGGTCGTTGGAGCACAATCCGCTGTTCTTCCGCTCCTCCTTCTCCTTCTCCGGCCACCTTGCCGAGCTCGAGCGAACCCTAGAGTCGACCTCATCGTCGAATCTGCCGTCGTCGTCGACGGTCGTGGTGGATAATCTTAGGGCTTATATGCAGATTATTGATGTGGCTTCTCTGTTAGGGTTGGATTACTATATTTCTGAGCACGCGTTTAAGTTGTTTAGGGATTGTTGTTCTGCTACTTGCTTGAGGAATCGGAGCGTTGAGGCGCTTGCTACTGCTGCTCTTGTTCAGGCTATTAGGGAGGCGCAGGAGCCTCGAACACTTCAGGAAATCTCTATTGCAGCAAATGTACCCCAAAAAGAAATTGGAAAGTACATCAAGATTTTGGGAGAAGCTTTGCAATTAAGTCAGCCCATCAATAGCAATTCCATATCAGTCCATATGCCAAGGTTCTGCACGCTTCTCCAACTCAATAAATCTGCTCAGGAACTGGCGACACACATCGGGGAAGTTGTCATCAACAAATGCTTCTGCACGCGCAGGAATCCGATAAGTATCTCGGCGGCTGCCATATACTTAGCTTGCCAATTAGAAGACAAGCGAAAAACTCAAGCCGAAATTTGTAAGGTTACAGGTCTCACAGAAGTCACCCTGAGGAAAGTCTACAAAGAACTACTAGAAAACTGGGATGATTTGCTTCCATCTAATTACACTCCTGCTGTTCCTCCAGAAAGGGCATTTCCCACAACTTTAATTGCTTCAGGCCGCTCTGCTGCAGCTCCTAAAGCTGATGCATTTGAAGCAGCTTCTTCAGAGAAAGACAGGCTGATTGATTCTAAACCTAATTTATCTGCCGAGATCTCGGACATGGGTCCTCCATCTAGAGTTAAAGAAGATAGTGAGAGTAAATTCGTGTCTCGTGGAATGTATAGCCCTTCAGTTAACAAACCGTCGGCGTAA

Protein sequence

MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLPSPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSNLPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKDRLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPSA

Homology

[Close]

BLAST of Sed0022670 vs. NCBI nr
Match: XP_022950148.1 (plant-specific TFIIB-related protein 1 [Cucurbita moschata])

HSP 1 Score: 744.6 bits (1921), Expect = 4.6e-211
Identity = 378/404 (93.56%), Postives = 390/404 (96.53%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRCAT+S+GKSITEC+SCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           SPPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSS+N
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE  SSEKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKVDAFERTSSEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + ID+KPN+S EISDMG PSRVKED+ESKFVSRGMY+P +NK S
Sbjct: 361 KQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVINKSS 403

[Close]

BLAST of Sed0022670 vs. NCBI nr
Match: XP_023544301.1 (plant-specific TFIIB-related protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 743.4 bits (1918), Expect = 1.0e-210
Identity = 378/404 (93.56%), Postives = 389/404 (96.29%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRCAT+S+GKSITEC+SCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           SPPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSS+N
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE  SSEKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKVDAFERTSSEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + ID+KPN+S EISDMG PSRVKED+ESKFVSRGMY+P  NK S
Sbjct: 361 KQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. NCBI nr
Match: XP_022978500.1 (plant-specific TFIIB-related protein 1 [Cucurbita maxima])

HSP 1 Score: 743.4 bits (1918), Expect = 1.0e-210
Identity = 378/404 (93.56%), Postives = 389/404 (96.29%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRCAT+S+GKSITEC+SCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           SPPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSS+N
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE  SSEKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKVDAFERTSSEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + ID+KPN+S EISDMG PSRVKED+ESKFVSRGMY+P  NK S
Sbjct: 361 KQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. NCBI nr
Match: KAG7034155.1 (Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 742.3 bits (1915), Expect = 2.3e-210
Identity = 378/404 (93.56%), Postives = 388/404 (96.04%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRCAT+S+GKSITEC+SCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           SPPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSS+N
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE  SSEKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKVDAFERTSSEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + ID+KPN S EISDMG PSRVKED+ESKFVSRGMY+P  NK S
Sbjct: 361 KQIDTKPNTSTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. NCBI nr
Match: KAG6603984.1 (Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 742.3 bits (1915), Expect = 2.3e-210
Identity = 378/404 (93.56%), Postives = 388/404 (96.04%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRCAT+S+GKSITEC+SCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           SPPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSS+N
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE  SSEKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKVDAFERTSSEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + ID+KPN S EISDMG PSRVKED+ESKFVSRGMY+P  NK S
Sbjct: 361 KQIDTKPNTSTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. ExPASy Swiss-Prot
Match: O23215 (Plant-specific TFIIB-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PBRP1 PE=2 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 6.7e-165
Identity = 312/395 (78.99%), Postives = 337/395 (85.32%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDL- 60
           MKCPYC++AQGRC TTSSG+SITEC SCGRV+EERQ   HHLFHLRAQD PLCLVTSDL 
Sbjct: 1   MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQ 60

Query: 61  ----PSPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLES 120
               PSP      +  +DPFEPTGFITAFSTWSLE +P+F RSS SFSGHLAELERTLE 
Sbjct: 61  TAAQPSP------EDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLEL 120

Query: 121 TSSSNLPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEA 180
            SS++  +SSTVVVDNLRAYMQIIDVAS+LGLD  ISEHAF+LFRDCCSATCLRNRSVEA
Sbjct: 121 ASSTSNSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEA 180

Query: 181 LATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMP 240
           LATA LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILGEALQLSQPINSNSISVHMP
Sbjct: 181 LATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMP 240

Query: 241 RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK 300
           RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK
Sbjct: 241 RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK 300

Query: 301 VTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAA 360
           +TGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPE+AFPTT I++ RS      D  E +
Sbjct: 301 ITGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPS 360

Query: 361 SSEKDRLIDSKPNLSAEISDMGPPSRVKEDSESKF 391
             EKD+   +KP  + + +   P  + KED + KF
Sbjct: 361 FVEKDK-PSAKPIETFDHTYQQP--KGKEDKQPKF 386

[Close]

BLAST of Sed0022670 vs. ExPASy Swiss-Prot
Match: Q54FD6 (Transcription initiation factor IIB OS=Dictyostelium discoideum OX=44689 GN=gtf2b PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.4e-23
Identity = 63/191 (32.98%), Postives = 107/191 (56.02%), Query Frame = 0


Query: 132 LRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEP 191
           L A+ +I  +A  + L   + + A +LFR        + RSV+ +  AAL  A R+    
Sbjct: 122 LAAFKEIGRMADHMNLPQTVQDRANELFRFMDDKKSTKGRSVDGMVAAALYIACRQEHLS 181

Query: 192 RTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELA 251
           RT +EI+   NVP+KEI +  KI+ E       + + S      RFC+ L+L    ++ A
Sbjct: 182 RTFKEIAALTNVPKKEISRCYKIMKETFASVLNLQTISSEDFTSRFCSTLKLPNDVKKGA 241

Query: 252 THIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKEL 311
            H+ ++ ++      ++PIS++AA+IY+  QL  +++TQ +I  V+G++EVT+R  YK+L
Sbjct: 242 EHVSKMAMDMGIVAGKSPISVTAASIYMVSQLSPEKRTQKQIADVSGVSEVTIRNAYKDL 301

Query: 312 LENWDDLLPSN 323
               D L+PS+
Sbjct: 302 YAKRDQLIPSD 312

[Close]

BLAST of Sed0022670 vs. ExPASy Swiss-Prot
Match: B8GJQ9 (Transcription initiation factor IIB OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) OX=521011 GN=tfb PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.4e-23
Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A  ++  +AS LGL   + E A  ++RD      +R RS+E +A AAL  A R+   PRT
Sbjct: 149 ALSELDRMASALGLPRNVRETAAVVYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRT 208

Query: 194 LQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATH 253
           L EI+  + V +KEIG+  + +   L L   +   S   ++PRFC+ L L    Q  A  
Sbjct: 209 LDEIAEVSRVSRKEIGRTYRFISRELGLK--LLPTSPIDYVPRFCSGLTLKGEVQSRAVE 268

Query: 254 IGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLE 313
           I      +   + R P  ++AAAIY++  L  +R+TQ E+ +V G+TEVT+R  YKEL E
Sbjct: 269 ILRQAAERELTSGRGPTGVAAAAIYISSILGGERRTQREVAEVAGVTEVTIRNRYKELAE 328

Query: 314 NWD 317
             D
Sbjct: 329 KLD 329

[Close]

BLAST of Sed0022670 vs. ExPASy Swiss-Prot
Match: A3CSQ6 (Transcription initiation factor IIB OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) OX=368407 GN=tfb PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.5e-23
Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A  ++  +AS LGL   + E A  ++RD      +R RS+E +A AAL  A R+   PRT
Sbjct: 152 ALSELDRMASALGLPRNVRETAAVVYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRT 211

Query: 194 LQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATH 253
           L EI+  + V +KEIG+  + +   L L   +   S   ++PRFC+ L L    Q  A  
Sbjct: 212 LDEIAEVSRVSRKEIGRTYRFISRELGLK--LLPTSPIDYVPRFCSGLNLKGEVQSRAVE 271

Query: 254 IGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLE 313
           I      +   + R P  ++AAAIY++  L  +R+TQ E+ +V G+TEVT+R  YKEL E
Sbjct: 272 ILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQREVAEVAGVTEVTIRNRYKELAE 331

Query: 314 NWD 317
             D
Sbjct: 332 KLD 332

[Close]

BLAST of Sed0022670 vs. ExPASy Swiss-Prot
Match: A7IAR4 (Transcription initiation factor IIB OS=Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8) OX=456442 GN=tfb PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.8e-23
Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A  ++  +AS LGL   + E A  ++RD      +R RS+E +A AAL  A R+   PRT
Sbjct: 149 ALSELDRMASALGLPRNVRETAAVVYRDAVDKNLIRGRSIEGVAAAALYAACRQCSVPRT 208

Query: 194 LQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATH 253
           L EI+  + V +KEIG+  + +   L L   +   S   ++PRFC+ L L    Q  A  
Sbjct: 209 LDEIAEVSRVSRKEIGRTYRFISRELGLK--LLPTSPIDYVPRFCSGLTLKGEVQSRAVE 268

Query: 254 IGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLE 313
           I      +   + R P  ++AAAIY++  L  +R+TQ E+ +V G+TEVT+R  YKEL E
Sbjct: 269 ILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQREVAEVAGVTEVTIRNRYKELAE 328

Query: 314 NWD 317
             D
Sbjct: 329 KLD 329

[Close]

BLAST of Sed0022670 vs. ExPASy TrEMBL
Match: A0A6J1GE41 (plant-specific TFIIB-related protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453324 PE=4 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 2.2e-211
Identity = 378/404 (93.56%), Postives = 390/404 (96.53%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRCAT+S+GKSITEC+SCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           SPPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSS+N
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE  SSEKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKVDAFERTSSEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + ID+KPN+S EISDMG PSRVKED+ESKFVSRGMY+P +NK S
Sbjct: 361 KQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVINKSS 403

[Close]

BLAST of Sed0022670 vs. ExPASy TrEMBL
Match: A0A6J1IQA1 (plant-specific TFIIB-related protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478459 PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.9e-211
Identity = 378/404 (93.56%), Postives = 389/404 (96.29%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRCAT+S+GKSITEC+SCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           SPPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSS+N
Sbjct: 61  SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE  SSEKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKVDAFERTSSEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + ID+KPN+S EISDMG PSRVKED+ESKFVSRGMY+P  NK S
Sbjct: 361 KQIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. ExPASy TrEMBL
Match: A0A0A0KM51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502590 PE=4 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 1.8e-208
Identity = 375/404 (92.82%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRC T+S+GKSITECISCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           +PPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSSSN
Sbjct: 61  TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE AS EKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKIDAFEGASLEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + I++KPN+S EIS+M  PSRVKEDSESKFVS GMY+P  NK S
Sbjct: 361 KPIETKPNISTEISEMSHPSRVKEDSESKFVSHGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. ExPASy TrEMBL
Match: A0A5D3CMR8 (Plant-specific TFIIB-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002190 PE=4 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 3.9e-208
Identity = 374/404 (92.57%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRC T+S+GKSITECISCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           +PPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSSSN
Sbjct: 61  TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE AS EKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKIDAFEGASLEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + I++KPN+  EI++M  PSRVKEDSESKFVSRGMY+P  NK S
Sbjct: 361 KPIETKPNICTEITEMSHPSRVKEDSESKFVSRGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. ExPASy TrEMBL
Match: A0A1S3B2G9 (uncharacterized protein LOC103485039 OS=Cucumis melo OX=3656 GN=LOC103485039 PE=4 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 3.9e-208
Identity = 374/404 (92.57%), Postives = 386/404 (95.54%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDLP 60
           MKCPYC+AAQGRC T+S+GKSITECISCGRVVEERQF PHHLFHLRAQDNPLCLVTSDLP
Sbjct: 1   MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP 60

Query: 61  SPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLESTSSSN 120
           +PPVHHQ D V DPFEPTGFITAFSTWSLEHNPLFFRS FSFSGHLAELERTLESTSSSN
Sbjct: 61  TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN 120

Query: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180
           LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
Sbjct: 121 LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA 180

Query: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240
           LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
Sbjct: 181 LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL 240

Query: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300
           LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
Sbjct: 241 LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT 300

Query: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAASSEKD 360
           EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTT+IASGRS AAPK DAFE AS EKD
Sbjct: 301 EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRS-AAPKIDAFEGASLEKD 360

Query: 361 RLIDSKPNLSAEISDMGPPSRVKEDSESKFVSRGMYSPSVNKPS 405
           + I++KPN+  EI++M  PSRVKEDSESKFVSRGMY+P  NK S
Sbjct: 361 KPIETKPNICTEITEMSHPSRVKEDSESKFVSRGMYNPVTNKSS 403

[Close]

BLAST of Sed0022670 vs. TAIR 10
Match: AT4G36650.1 (plant-specific TFIIB-related protein )

HSP 1 Score: 581.6 bits (1498), Expect = 4.8e-166
Identity = 312/395 (78.99%), Postives = 337/395 (85.32%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDL- 60
           MKCPYC++AQGRC TTSSG+SITEC SCGRV+EERQ   HHLFHLRAQD PLCLVTSDL 
Sbjct: 1   MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQ 60

Query: 61  ----PSPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLES 120
               PSP      +  +DPFEPTGFITAFSTWSLE +P+F RSS SFSGHLAELERTLE 
Sbjct: 61  TAAQPSP------EDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLEL 120

Query: 121 TSSSNLPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEA 180
            SS++  +SSTVVVDNLRAYMQIIDVAS+LGLD  ISEHAF+LFRDCCSATCLRNRSVEA
Sbjct: 121 ASSTSNSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEA 180

Query: 181 LATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMP 240
           LATA LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILGEALQLSQPINSNSISVHMP
Sbjct: 181 LATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMP 240

Query: 241 RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK 300
           RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK
Sbjct: 241 RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK 300

Query: 301 VTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSAAAPKADAFEAA 360
           +TGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPE+AFPTT I++ RS      D  E +
Sbjct: 301 ITGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPS 360

Query: 361 SSEKDRLIDSKPNLSAEISDMGPPSRVKEDSESKF 391
             EKD+   +KP  + + +   P  + KED + KF
Sbjct: 361 FVEKDK-PSAKPIETFDHTYQQP--KGKEDKQPKF 386

[Close]

BLAST of Sed0022670 vs. TAIR 10
Match: AT4G36650.2 (plant-specific TFIIB-related protein )

HSP 1 Score: 503.1 bits (1294), Expect = 2.2e-142
Identity = 268/329 (81.46%), Postives = 285/329 (86.63%), Query Frame = 0


Query: 1   MKCPYCTAAQGRCATTSSGKSITECISCGRVVEERQFLPHHLFHLRAQDNPLCLVTSDL- 60
           MKCPYC++AQGRC TTSSG+SITEC SCGRV+EERQ   HHLFHLRAQD PLCLVTSDL 
Sbjct: 1   MKCPYCSSAQGRCTTTSSGRSITECSSCGRVMEERQTQNHHLFHLRAQDTPLCLVTSDLQ 60

Query: 61  ----PSPPVHHQGDPVQDPFEPTGFITAFSTWSLEHNPLFFRSSFSFSGHLAELERTLES 120
               PSP      +  +DPFEPTGFITAFSTWSLE +P+F RSS SFSGHLAELERTLE 
Sbjct: 61  TAAQPSP------EDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLEL 120

Query: 121 TSSSNLPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEA 180
            SS++  +SSTVVVDNLRAYMQIIDVAS+LGLD  ISEHAF+LFRDCCSATCLRNRSVEA
Sbjct: 121 ASSTSNSNSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEA 180

Query: 181 LATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMP 240
           LATA LVQAIREAQEPRTLQEISIAANV QKEIGKYIKILGEALQLSQPINSNSISVHMP
Sbjct: 181 LATACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMP 240

Query: 241 RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK 300
           RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK
Sbjct: 241 RFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICK 300

Query: 301 VTGLTEVTLRKVY---------KELLENW 316
           +TGLTE   RK +         ++LLE W
Sbjct: 301 ITGLTE---RKHFPQPQSPQPAQQLLEPW 320

[Close]

BLAST of Sed0022670 vs. TAIR 10
Match: AT2G41630.1 (transcription factor IIB )

HSP 1 Score: 90.9 bits (224), Expect = 2.6e-18
Identity = 68/199 (34.17%), Postives = 107/199 (53.77%), Query Frame = 0


Query: 132 LRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEP 191
           ++A+  I  ++  LGL   I + A +L++        R R+ +AL  A L  A R+  +P
Sbjct: 106 IQAFKTIATMSERLGLVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKP 165

Query: 192 RTLQEISIAAN-VPQKEIGK----YIKILGEALQLSQPINSNSISV--HMPRFCTLLQLN 251
           RT++EI + AN   +KEIG+     +K LG  L+  Q ++  +I     M RFC+ L ++
Sbjct: 166 RTIKEICVIANGATKKEIGRAKDYIVKTLG--LEPGQSVDLGTIHAGDFMRRFCSNLAMS 225

Query: 252 KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTL 311
             A + A     V  ++ F  RR+PISI+A  IY+  QL D +KT  +I   TG+ E T+
Sbjct: 226 NHAVKAAQE--AVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTI 285

Query: 312 RKVYKELLENWDDLLPSNY 324
           R  YK+L  +   + PS Y
Sbjct: 286 RNSYKDLYPHLSKIAPSWY 300

[Close]

BLAST of Sed0022670 vs. TAIR 10
Match: AT3G10330.1 (Cyclin-like family protein )

HSP 1 Score: 87.0 bits (214), Expect = 3.7e-17
Identity = 70/201 (34.83%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 134 AYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRT 193
           A+  I  +A  LGL   I + A ++++        R R+ +AL  A L  A R+  +PRT
Sbjct: 108 AFKTIATMADRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT 167

Query: 194 LQEI-SIAANVPQKEIGK----YIKILGEALQLSQPINSNSISV--HMPRFCTLL----Q 253
           ++EI S+A    +KEIG+     +K LG  L+  Q +   +I     M RFC+ L    Q
Sbjct: 168 VKEICSVANGATKKEIGRAKEYIVKQLG--LETGQLVEMGTIHAGDFMRRFCSNLGMTNQ 227

Query: 254 LNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEV 313
             K+AQE       V  ++ F  RR+PISI+AA IY+  QL D++K   +I   TG+ E 
Sbjct: 228 TVKAAQE------SVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEG 287

Query: 314 TLRKVYKELLENWDDLLPSNY 324
           T+R  YK+L  +   ++P+ Y
Sbjct: 288 TIRNSYKDLYPHLSKIIPAWY 300

[Close]

BLAST of Sed0022670 vs. TAIR 10
Match: AT4G10680.1 (transcription factor IIB (TFIIB) family protein )

HSP 1 Score: 53.5 bits (127), Expect = 4.5e-07
Identity = 38/119 (31.93%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 100 FSFSGHLAELERTLESTSSSNLPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLF 159
           F  SG  + L   L  T +  + +     V  + AY +I  +   LGL + IS  A K+ 
Sbjct: 61  FKLSGKSSSLASKLRRTQNEMIKNKQEEDVIKI-AYAEIERMTEALGLTFGISNTACKIL 120

Query: 160 RDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEA 219
                      +S+  L  A++ +A R+   P+TL+EIS  ANV  KEI K +K+LG++
Sbjct: 121 SKLDKKNLRGGKSLRGLCAASVSRACRQVNIPKTLKEISAVANVDMKEINKAVKLLGDS 178

The following BLAST results are available for this feature:

BLAST of Sed0022670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950148.1	4.6e-211	93.56	plant-specific TFIIB-related protein 1 [Cucurbita moschata]	[more]
XP_023544301.1	1.0e-210	93.56	plant-specific TFIIB-related protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022978500.1	1.0e-210	93.56	plant-specific TFIIB-related protein 1 [Cucurbita maxima]	[more]
KAG7034155.1	2.3e-210	93.56	Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. a...	[more]
KAG6603984.1	2.3e-210	93.56	Plant-specific TFIIB-related protein 1, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Sed0022670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23215	6.7e-165	78.99	Plant-specific TFIIB-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PBRP1 ...	[more]
Q54FD6	3.4e-23	32.98	Transcription initiation factor IIB OS=Dictyostelium discoideum OX=44689 GN=gtf2...	[more]
B8GJQ9	4.4e-23	37.16	Transcription initiation factor IIB OS=Methanosphaerula palustris (strain ATCC B...	[more]
A3CSQ6	7.5e-23	37.16	Transcription initiation factor IIB OS=Methanoculleus marisnigri (strain ATCC 35...	[more]
A7IAR4	9.8e-23	37.16	Transcription initiation factor IIB OS=Methanoregula boonei (strain DSM 21154 / ...	[more]

BLAST of Sed0022670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE41	2.2e-211	93.56	plant-specific TFIIB-related protein 1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1IQA1	4.9e-211	93.56	plant-specific TFIIB-related protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1114784...	[more]
A0A0A0KM51	1.8e-208	92.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502590 PE=4 SV=1	[more]
A0A5D3CMR8	3.9e-208	92.57	Plant-specific TFIIB-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B2G9	3.9e-208	92.57	uncharacterized protein LOC103485039 OS=Cucumis melo OX=3656 GN=LOC103485039 PE=...	[more]

BLAST of Sed0022670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36650.1	4.8e-166	78.99	plant-specific TFIIB-related protein	[more]
AT4G36650.2	2.2e-142	81.46	plant-specific TFIIB-related protein	[more]
AT2G41630.1	2.6e-18	34.17	transcription factor IIB	[more]
AT3G10330.1	3.7e-17	34.83	Cyclin-like family protein	[more]
AT4G10680.1	4.5e-07	31.93	transcription factor IIB (TFIIB) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000812	Transcription factor TFIIB	PRINTS	PR00685	TIFACTORIIB	coord: 233..251 score: 37.54 coord: 18..38 score: 26.35 coord: 178..197 score: 44.33 coord: 299..313 score: 47.56 coord: 204..219 score: 37.08 coord: 267..283 score: 54.51
IPR000812	Transcription factor TFIIB	PANTHER	PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 1..388
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 232..313 e-value: 1.7E-15 score: 67.5 coord: 136..217 e-value: 2.6E-4 score: 30.3
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 234..312 e-value: 6.2303E-15 score: 67.6488
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 134..215 e-value: 3.01764E-6 score: 42.9961
None	No IPR available	GENE3D	1.10.472.10		coord: 132..223 e-value: 3.1E-26 score: 93.4
None	No IPR available	GENE3D	1.10.472.10		coord: 232..329 e-value: 2.2E-25 score: 90.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..405
None	No IPR available	PANTHER	PTHR11618:SF26	PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1	coord: 1..388
IPR013150	Transcription factor TFIIB, cyclin-like domain	PFAM	PF00382	TFIIB	coord: 234..304 e-value: 2.7E-12 score: 46.6 coord: 140..208 e-value: 1.2E-7 score: 31.7
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 133..223
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 230..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022670.1	Sed0022670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0070897	transcription preinitiation complex assembly
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009527	plastid outer membrane
cellular_component	GO:0097550	transcription preinitiation complex
molecular_function	GO:0000182	rDNA binding
molecular_function	GO:0017025	TBP-class protein binding