Sed0022663 (gene) Chayote v1

Overview


Name	Sed0022663
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor 11-like
Location	LG08: 1932577 .. 1933221 (+)
RNA-Seq Expression	Sed0022663
Synteny	Sed0022663

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGCAGTGGAGGCTCCTTTACTGACAGACAGCTCCAAACCTTCATCTCAGCCGCCATTAATGGCCGCCACACAAAGCTCCAAATCTTCATCTCAACCAACTAATCTTCATCAACAGATCAGCCATGGAAGAACAAGGTTTCTGGGAGTTCGGCAACGCCCCTCGGGAAGATGGGTCGCAGAGATCAAAGTCTCCTCACAGAAGCTAAGGCTATGGCTCGGAACTTTCGACCGAGCTGAAGACGCCGCGATGGCTTACGACAGAGCTGCAAGGCTCCTCAGAGGAACGTCCGCAAAGACAAACTTCCCATACGATCACGGCTCGTTCGATTCCACCATTGACGAAGCACAAGCTCAGTCCTTGTTTGGACACAGCCCCAAGCTCTGCCGTCTGATTCAACTCGCCGTCTTGAAGAACCGGAGCCGCTCAAGACCAACAGAAGATCAACATAAGCAGCCATGGAGGAATAATGGGGTTGTCGATTCGGTTGTCGAAGATACTATCTTTTGTTCTTCAAGTATGGATTTGTCTGGAAATGATAAAGCTGGATCATGTGGATTCTCGTTTGGGAATTCGAAAGTTTATACTTCTGTGTTTGTTGCTCCTTCTTTTAGCTCTGGTGTTAGAAGTGAAAGAGAGATATGA

mRNA sequence

TAAGCAGTGGAGGCTCCTTTACTGACAGACAGCTCCAAACCTTCATCTCAGCCGCCATTAATGGCCGCCACACAAAGCTCCAAATCTTCATCTCAACCAACTAATCTTCATCAACAGATCAGCCATGGAAGAACAAGGTTTCTGGGAGTTCGGCAACGCCCCTCGGGAAGATGGGTCGCAGAGATCAAAGTCTCCTCACAGAAGCTAAGGCTATGGCTCGGAACTTTCGACCGAGCTGAAGACGCCGCGATGGCTTACGACAGAGCTGCAAGGCTCCTCAGAGGAACGTCCGCAAAGACAAACTTCCCATACGATCACGGCTCGTTCGATTCCACCATTGACGAAGCACAAGCTCAGTCCTTGTTTGGACACAGCCCCAAGCTCTGCCGTCTGATTCAACTCGCCGTCTTGAAGAACCGGAGCCGCTCAAGACCAACAGAAGATCAACATAAGCAGCCATGGAGGAATAATGGGGTTGTCGATTCGGTTGTCGAAGATACTATCTTTTGTTCTTCAAGTATGGATTTGTCTGGAAATGATAAAGCTGGATCATGTGGATTCTCGTTTGGGAATTCGAAAGTTTATACTTCTGTGTTTGTTGCTCCTTCTTTTAGCTCTGGTGTTAGAAGTGAAAGAGAGATATGA

Coding sequence (CDS)

ATGGCCGCCACACAAAGCTCCAAATCTTCATCTCAACCAACTAATCTTCATCAACAGATCAGCCATGGAAGAACAAGGTTTCTGGGAGTTCGGCAACGCCCCTCGGGAAGATGGGTCGCAGAGATCAAAGTCTCCTCACAGAAGCTAAGGCTATGGCTCGGAACTTTCGACCGAGCTGAAGACGCCGCGATGGCTTACGACAGAGCTGCAAGGCTCCTCAGAGGAACGTCCGCAAAGACAAACTTCCCATACGATCACGGCTCGTTCGATTCCACCATTGACGAAGCACAAGCTCAGTCCTTGTTTGGACACAGCCCCAAGCTCTGCCGTCTGATTCAACTCGCCGTCTTGAAGAACCGGAGCCGCTCAAGACCAACAGAAGATCAACATAAGCAGCCATGGAGGAATAATGGGGTTGTCGATTCGGTTGTCGAAGATACTATCTTTTGTTCTTCAAGTATGGATTTGTCTGGAAATGATAAAGCTGGATCATGTGGATTCTCGTTTGGGAATTCGAAAGTTTATACTTCTGTGTTTGTTGCTCCTTCTTTTAGCTCTGGTGTTAGAAGTGAAAGAGAGATATGA

Protein sequence

MAATQSSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNFPYDHGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRSRPTEDQHKQPWRNNGVVDSVVEDTIFCSSSMDLSGNDKAGSCGFSFGNSKVYTSVFVAPSFSSGVRSEREI

Homology

[Close]

BLAST of Sed0022663 vs. NCBI nr
Match: XP_038878811.1 (ethylene-responsive transcription factor ERN1-like [Benincasa hispida])

HSP 1 Score: 266.5 bits (680), Expect = 1.7e-67
Identity = 146/201 (72.64%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 1   MAATQSSKSSSQPTN------LHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLG 60
           MAATQSS  SSQP N       +Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLG
Sbjct: 1   MAATQSSNPSSQPPNPLNSNPNNQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLG 60

Query: 61  TFDRAEDAAMAYDRAARLLRGTSAKTNFPY---DHGSFD-STIDEAQAQSLFGHSPKLCR 120
           TF+RAEDAAMAYDRAARLLRG SAKTNFPY   DHG F+ STI+E Q++SLFGHSPKLCR
Sbjct: 61  TFNRAEDAAMAYDRAARLLRGRSAKTNFPYDDHDHGFFNSSTINEEQSRSLFGHSPKLCR 120

Query: 121 LIQLAVLKNRSRSRPTEDQHKQPWRNNGVVDSVVEDTIFCSSS---MDLSGNDKAGSCGF 180
           L+Q A++KNRSR R T D  +Q  RNNG++DSVVEDTIFCSS+    + + N+K   CGF
Sbjct: 121 LLQHAIMKNRSRLRSTADYQQQITRNNGLIDSVVEDTIFCSSTNLVENKNDNNKGCGCGF 180

Query: 181 SFGNSKVYTSVFVAPSFSSGV 189
           SFG SKVYTSVFVAPSFSS V
Sbjct: 181 SFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Sed0022663 vs. NCBI nr
Match: XP_022134768.1 (ethylene-responsive transcription factor 11-like [Momordica charantia])

HSP 1 Score: 245.4 bits (625), Expect = 4.2e-61
Identity = 142/201 (70.65%), Postives = 156/201 (77.61%), Query Frame = 0


Query: 1   MAATQSSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAE 60
           MAATQSSKSS  P  L     HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAE
Sbjct: 1   MAATQSSKSS--PDQLPITEHHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAE 60

Query: 61  DAAMAYDRAARLLRGTSAKTNFPYD---HGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVL 120
           DAAMAYDRAARLLRGT+AKTNFPYD   HGSF      + + ++FGHSPKL RL+QLA++
Sbjct: 61  DAAMAYDRAARLLRGTNAKTNFPYDHHVHGSF------SNSSTIFGHSPKLYRLLQLAIM 120

Query: 121 KNR-SRSRPTEDQH--KQPWRNNGVVDSVVEDTIFCSSSMDLSGNDKAGSCGFSFGNSKV 180
           KNR SR R T D H  +QP R+ G  DSVVEDTIFCSS+ + S  +    CGFSFG SKV
Sbjct: 121 KNRNSRPRSTADDHLQQQPSRSIGFTDSVVEDTIFCSSTNNHSSCENYRGCGFSFGGSKV 180

Query: 181 YTSVFVAPSFSS-GVRSEREI 195
           YTSVFVAPSFSS  VRSE E+
Sbjct: 181 YTSVFVAPSFSSDDVRSEVEL 193

[Close]

BLAST of Sed0022663 vs. NCBI nr
Match: XP_031737158.1 (ethylene-responsive transcription factor ERN2 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 3.5e-60
Identity = 136/199 (68.34%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           ++ SSS P N  Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAAMA
Sbjct: 2   ATNSSSLPPN--QEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAMA 61

Query: 66  YDRAARLLRGTSAKTNFPYD--HGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRS 125
           YDRAARLLRG SAKTNF YD  HG F+STI++ Q  SLF HSPKLCRL+Q A++KNRSR 
Sbjct: 62  YDRAARLLRGRSAKTNFSYDYHHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRL 121

Query: 126 RPTED---------QHKQPWRNNGVVDSVVEDTIFCSSSMDLSGN----DKAGSCGFSFG 185
             T D         Q +Q  RNNG +DSVVEDTIFCSS+  +  N    +K   CGFSFG
Sbjct: 122 ISTTDHQYHHRRRHQQQQISRNNGGIDSVVEDTIFCSSTNLVENNNNSSNKGCGCGFSFG 181

Query: 186 NSKVYTSVFVAPSFSSGVR 190
            SKVYTSVFVAPSFSS V+
Sbjct: 182 GSKVYTSVFVAPSFSSDVQ 198

[Close]

BLAST of Sed0022663 vs. NCBI nr
Match: XP_016901366.1 (PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo] >KAA0058038.1 ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 3.9e-59
Identity = 137/203 (67.49%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           ++ SSSQP N  Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+A
Sbjct: 2   ATNSSSQPPN--QEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALA 61

Query: 66  YDRAARLLRGTSAKTNF--PYDHGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRS 125
           YDRAARLLRG SAKTNF   YDHG F+STI++ Q  SLF HSPKLCRL+Q A++KNRSR 
Sbjct: 62  YDRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRL 121

Query: 126 RPTED--------QHKQPWRNNGVVDSVVEDTIFCSSSMDLSGND----------KAGSC 185
             T D          +Q  RNNG +DSVVEDTIFCSS+ +L  ND          K   C
Sbjct: 122 ISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSST-NLVENDNNNNNNNNSNKGCGC 181

Query: 186 GFSFGNSKVYTSVFVAPSFSSGV 189
           GFSFG SKVYTSVFVAPSFSS V
Sbjct: 182 GFSFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Sed0022663 vs. NCBI nr
Match: TYK11541.1 (ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 238.4 bits (607), Expect = 5.1e-59
Identity = 135/206 (65.53%), Postives = 153/206 (74.27%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           ++ SSSQP N  Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+A
Sbjct: 2   ATNSSSQPPN--QEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALA 61

Query: 66  YDRAARLLRGTSAKTNF--PYDHGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRS 125
           YDRAARLLRG SAKTNF   YDHG F+STI++ Q  SLF HSPKLCRL+Q A++KNRSR 
Sbjct: 62  YDRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRL 121

Query: 126 RPTED--------QHKQPWRNNGVVDSVVEDTIFCSS-------------SMDLSGNDKA 185
             T D          +Q  RNNG +DSVVEDTIFCSS             + + S ++K 
Sbjct: 122 ISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNNNSNSNKG 181

Query: 186 GSCGFSFGNSKVYTSVFVAPSFSSGV 189
             CGFSFG SKVYTSVFVAPSFSS V
Sbjct: 182 CGCGFSFGGSKVYTSVFVAPSFSSDV 205

[Close]

BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-18
Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 21  SHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKT 80
           S+   +F+GVRQRPSGRWVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG++ +T
Sbjct: 33  SNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRT 92

Query: 81  NFPYDHGSFDSTI 94
           NF   H S DS +
Sbjct: 93  NF-ITHVSLDSPL 104

[Close]

BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-18
Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 26  RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNFPYD 85
           +F+GVRQRPSGRWVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG++ +TNF   
Sbjct: 34  KFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF-IT 93

Query: 86  HGSFDSTI 94
           H S DS +
Sbjct: 94  HVSLDSPL 100

[Close]

BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 24 RTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNF 83
          +T+F+GVRQRPSG+WVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG++ +TNF
Sbjct: 19 KTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 77

[Close]

BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 21 SHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKT 80
          S  R +F+GVRQRPSGR+VAEIK ++Q +R+WLGTF+ AE+AA AYD AA LLRG+  +T
Sbjct: 27 SETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAARAYDEAATLLRGSKTRT 86

Query: 81 NFPYDHGSFDSTI 94
          NF   H S+DS +
Sbjct: 87 NF-VTHVSYDSPL 98

[Close]

BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.2e-16
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 26  RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNFPYD 85
           RF GVRQR  G WV+EI+    K R+WLGTF+ AEDAA AYD AARL+ G  A+TNFPY+
Sbjct: 7   RFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYN 66

Query: 86  HGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRSRPTEDQHKQPWRNNGV 140
             +  ++  +  + +L     K C +  L + K       T+    Q   ++GV
Sbjct: 67  PNAIPTSSSKLLSATLTAKLHK-CYMASLQMTKQTQTQTQTQTARSQSADSDGV 119

[Close]

BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A6J1C2Y6 (ethylene-responsive transcription factor 11-like OS=Momordica charantia OX=3673 GN=LOC111006959 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.0e-61
Identity = 142/201 (70.65%), Postives = 156/201 (77.61%), Query Frame = 0


Query: 1   MAATQSSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAE 60
           MAATQSSKSS  P  L     HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAE
Sbjct: 1   MAATQSSKSS--PDQLPITEHHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAE 60

Query: 61  DAAMAYDRAARLLRGTSAKTNFPYD---HGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVL 120
           DAAMAYDRAARLLRGT+AKTNFPYD   HGSF      + + ++FGHSPKL RL+QLA++
Sbjct: 61  DAAMAYDRAARLLRGTNAKTNFPYDHHVHGSF------SNSSTIFGHSPKLYRLLQLAIM 120

Query: 121 KNR-SRSRPTEDQH--KQPWRNNGVVDSVVEDTIFCSSSMDLSGNDKAGSCGFSFGNSKV 180
           KNR SR R T D H  +QP R+ G  DSVVEDTIFCSS+ + S  +    CGFSFG SKV
Sbjct: 121 KNRNSRPRSTADDHLQQQPSRSIGFTDSVVEDTIFCSSTNNHSSCENYRGCGFSFGGSKV 180

Query: 181 YTSVFVAPSFSS-GVRSEREI 195
           YTSVFVAPSFSS  VRSE E+
Sbjct: 181 YTSVFVAPSFSSDDVRSEVEL 193

[Close]

BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A0A0LPP4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015755 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.7e-60
Identity = 136/199 (68.34%), Postives = 153/199 (76.88%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           ++ SSS P N  Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAAMA
Sbjct: 2   ATNSSSLPPN--QEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAMA 61

Query: 66  YDRAARLLRGTSAKTNFPYD--HGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRS 125
           YDRAARLLRG SAKTNF YD  HG F+STI++ Q  SLF HSPKLCRL+Q A++KNRSR 
Sbjct: 62  YDRAARLLRGRSAKTNFSYDYHHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRL 121

Query: 126 RPTED---------QHKQPWRNNGVVDSVVEDTIFCSSSMDLSGN----DKAGSCGFSFG 185
             T D         Q +Q  RNNG +DSVVEDTIFCSS+  +  N    +K   CGFSFG
Sbjct: 122 ISTTDHQYHHRRRHQQQQISRNNGGIDSVVEDTIFCSSTNLVENNNNSSNKGCGCGFSFG 181

Query: 186 NSKVYTSVFVAPSFSSGVR 190
            SKVYTSVFVAPSFSS V+
Sbjct: 182 GSKVYTSVFVAPSFSSDVQ 198

[Close]

BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A5A7USB5 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003430 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59
Identity = 137/203 (67.49%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           ++ SSSQP N  Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+A
Sbjct: 2   ATNSSSQPPN--QEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALA 61

Query: 66  YDRAARLLRGTSAKTNF--PYDHGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRS 125
           YDRAARLLRG SAKTNF   YDHG F+STI++ Q  SLF HSPKLCRL+Q A++KNRSR 
Sbjct: 62  YDRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRL 121

Query: 126 RPTED--------QHKQPWRNNGVVDSVVEDTIFCSSSMDLSGND----------KAGSC 185
             T D          +Q  RNNG +DSVVEDTIFCSS+ +L  ND          K   C
Sbjct: 122 ISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSST-NLVENDNNNNNNNNSNKGCGC 181

Query: 186 GFSFGNSKVYTSVFVAPSFSSGV 189
           GFSFG SKVYTSVFVAPSFSS V
Sbjct: 182 GFSFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A1S4DZE7 (ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494092 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59
Identity = 137/203 (67.49%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           ++ SSSQP N  Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+A
Sbjct: 2   ATNSSSQPPN--QEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALA 61

Query: 66  YDRAARLLRGTSAKTNF--PYDHGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRS 125
           YDRAARLLRG SAKTNF   YDHG F+STI++ Q  SLF HSPKLCRL+Q A++KNRSR 
Sbjct: 62  YDRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRL 121

Query: 126 RPTED--------QHKQPWRNNGVVDSVVEDTIFCSSSMDLSGND----------KAGSC 185
             T D          +Q  RNNG +DSVVEDTIFCSS+ +L  ND          K   C
Sbjct: 122 ISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSST-NLVENDNNNNNNNNSNKGCGC 181

Query: 186 GFSFGNSKVYTSVFVAPSFSSGV 189
           GFSFG SKVYTSVFVAPSFSS V
Sbjct: 182 GFSFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A5D3CI83 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37291G00010 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.5e-59
Identity = 135/206 (65.53%), Postives = 153/206 (74.27%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           ++ SSSQP N  Q+I+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+A
Sbjct: 2   ATNSSSQPPN--QEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALA 61

Query: 66  YDRAARLLRGTSAKTNF--PYDHGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRS 125
           YDRAARLLRG SAKTNF   YDHG F+STI++ Q  SLF HSPKLCRL+Q A++KNRSR 
Sbjct: 62  YDRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRL 121

Query: 126 RPTED--------QHKQPWRNNGVVDSVVEDTIFCSS-------------SMDLSGNDKA 185
             T D          +Q  RNNG +DSVVEDTIFCSS             + + S ++K 
Sbjct: 122 ISTTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNNNSNSNKG 181

Query: 186 GSCGFSFGNSKVYTSVFVAPSFSSGV 189
             CGFSFG SKVYTSVFVAPSFSS V
Sbjct: 182 CGCGFSFGGSKVYTSVFVAPSFSSDV 205

[Close]

BLAST of Sed0022663 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 91.3 bits (225), Expect = 9.4e-19
Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 24 RTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNF 83
          +T+F+GVRQRPSG+WVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG++ +TNF
Sbjct: 19 KTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 77

[Close]

BLAST of Sed0022663 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.1e-17
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 26  RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNFPYD 85
           RF GVRQR  G WV+EI+    K R+WLGTF+ AEDAA AYD AARL+ G  A+TNFPY+
Sbjct: 7   RFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYN 66

Query: 86  HGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRSRPTEDQHKQPWRNNGV 140
             +  ++  +  + +L     K C +  L + K       T+    Q   ++GV
Sbjct: 67  PNAIPTSSSKLLSATLTAKLHK-CYMASLQMTKQTQTQTQTQTARSQSADSDGV 119

[Close]

BLAST of Sed0022663 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 47/81 (58.02%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 4  TQSSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAA 63
          T SSKS        +Q     TRFLGVR+RP GR+ AEI+  + K R WLGTFD AE+AA
Sbjct: 3  TTSSKSKK------KQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 62

Query: 64 MAYDRAARLLRGTSAKTNFPY 85
          +AYDRAAR +RGT A+TNF Y
Sbjct: 63 LAYDRAARSMRGTRARTNFVY 77

[Close]

BLAST of Sed0022663 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-16
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 26 RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNFPYD 85
          RF GVR+RP GR+ AEI+   +K R+WLGTFD AE+AA AYD AAR LRG  AKTNFP D
Sbjct: 27 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPID 86

Query: 86 HGS 89
            S
Sbjct: 87 SSS 89

[Close]

BLAST of Sed0022663 vs. TAIR 10
Match: AT1G36060.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 9.7e-16
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 6   SSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMA 65
           SS S S+P  L++          GVRQR  G+WVAEI++   + RLWLGTFD AE+AA+A
Sbjct: 132 SSGSVSKPAKLYR----------GVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALA 191

Query: 66  YDRAARLLRGTSAKTNFP---YDHGSFDSTIDE 96
           YDRAA  LRG SA+ NFP   Y  GS  S   E
Sbjct: 192 YDRAAFKLRGDSARLNFPALRYQTGSSPSDTGE 214

The following BLAST results are available for this feature:

BLAST of Sed0022663 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878811.1	1.7e-67	72.64	ethylene-responsive transcription factor ERN1-like [Benincasa hispida]	[more]
XP_022134768.1	4.2e-61	70.65	ethylene-responsive transcription factor 11-like [Momordica charantia]	[more]
XP_031737158.1	3.5e-60	68.34	ethylene-responsive transcription factor ERN2 [Cucumis sativus]	[more]
XP_016901366.1	3.9e-59	67.49	PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucu...	[more]
TYK11541.1	5.1e-59	65.53	ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo va...	[more]

BLAST of Sed0022663 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Q5W1	3.5e-18	61.64	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
A0A1X9PY88	7.7e-18	64.71	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
Q6J9S1	1.3e-17	67.80	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
A9Y0K8	2.9e-17	60.27	Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=...	[more]
Q94AW5	7.2e-16	41.23	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0022663 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2Y6	2.0e-61	70.65	ethylene-responsive transcription factor 11-like OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LPP4	1.7e-60	68.34	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015755 PE=...	[more]
A0A5A7USB5	1.9e-59	67.49	Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]
A0A1S4DZE7	1.9e-59	67.49	ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]
A0A5D3CI83	2.5e-59	65.53	Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]

BLAST of Sed0022663 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	9.4e-19	67.80	related to AP2 11	[more]
AT5G25190.1	5.1e-17	41.23	Integrase-type DNA-binding superfamily protein	[more]
AT5G13910.1	1.1e-16	58.02	Integrase-type DNA-binding superfamily protein	[more]
AT1G50640.1	4.3e-16	65.08	ethylene responsive element binding factor 3	[more]
AT1G36060.1	9.7e-16	51.61	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 27..38 score: 52.42 coord: 49..65 score: 61.93
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 26..89 e-value: 5.7E-33 score: 125.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..75 e-value: 5.2E-11 score: 42.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 26..83 score: 18.97933
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 25..85 e-value: 4.24822E-30 score: 103.505
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 25..85 e-value: 2.4E-23 score: 84.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 11..190
None	No IPR available	PANTHER	PTHR31194:SF82	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE	coord: 11..190
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 27..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022663.1	Sed0022663.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity