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Sed0022663 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAAGCAGTGGAGGCTCCTTTACTGACAGACAGCTCCAAACCTTCATCTCAGCCGCCATTAATGGCCGCCACACAAAGCTCCAAATCTTCATCTCAACCAACTAATCTTCATCAACAGATCAGCCATGGAAGAACAAGGTTTCTGGGAGTTCGGCAACGCCCCTCGGGAAGATGGGTCGCAGAGATCAAAGTCTCCTCACAGAAGCTAAGGCTATGGCTCGGAACTTTCGACCGAGCTGAAGACGCCGCGATGGCTTACGACAGAGCTGCAAGGCTCCTCAGAGGAACGTCCGCAAAGACAAACTTCCCATACGATCACGGCTCGTTCGATTCCACCATTGACGAAGCACAAGCTCAGTCCTTGTTTGGACACAGCCCCAAGCTCTGCCGTCTGATTCAACTCGCCGTCTTGAAGAACCGGAGCCGCTCAAGACCAACAGAAGATCAACATAAGCAGCCATGGAGGAATAATGGGGTTGTCGATTCGGTTGTCGAAGATACTATCTTTTGTTCTTCAAGTATGGATTTGTCTGGAAATGATAAAGCTGGATCATGTGGATTCTCGTTTGGGAATTCGAAAGTTTATACTTCTGTGTTTGTTGCTCCTTCTTTTAGCTCTGGTGTTAGAAGTGAAAGAGAGATATGA TAAGCAGTGGAGGCTCCTTTACTGACAGACAGCTCCAAACCTTCATCTCAGCCGCCATTAATGGCCGCCACACAAAGCTCCAAATCTTCATCTCAACCAACTAATCTTCATCAACAGATCAGCCATGGAAGAACAAGGTTTCTGGGAGTTCGGCAACGCCCCTCGGGAAGATGGGTCGCAGAGATCAAAGTCTCCTCACAGAAGCTAAGGCTATGGCTCGGAACTTTCGACCGAGCTGAAGACGCCGCGATGGCTTACGACAGAGCTGCAAGGCTCCTCAGAGGAACGTCCGCAAAGACAAACTTCCCATACGATCACGGCTCGTTCGATTCCACCATTGACGAAGCACAAGCTCAGTCCTTGTTTGGACACAGCCCCAAGCTCTGCCGTCTGATTCAACTCGCCGTCTTGAAGAACCGGAGCCGCTCAAGACCAACAGAAGATCAACATAAGCAGCCATGGAGGAATAATGGGGTTGTCGATTCGGTTGTCGAAGATACTATCTTTTGTTCTTCAAGTATGGATTTGTCTGGAAATGATAAAGCTGGATCATGTGGATTCTCGTTTGGGAATTCGAAAGTTTATACTTCTGTGTTTGTTGCTCCTTCTTTTAGCTCTGGTGTTAGAAGTGAAAGAGAGATATGA ATGGCCGCCACACAAAGCTCCAAATCTTCATCTCAACCAACTAATCTTCATCAACAGATCAGCCATGGAAGAACAAGGTTTCTGGGAGTTCGGCAACGCCCCTCGGGAAGATGGGTCGCAGAGATCAAAGTCTCCTCACAGAAGCTAAGGCTATGGCTCGGAACTTTCGACCGAGCTGAAGACGCCGCGATGGCTTACGACAGAGCTGCAAGGCTCCTCAGAGGAACGTCCGCAAAGACAAACTTCCCATACGATCACGGCTCGTTCGATTCCACCATTGACGAAGCACAAGCTCAGTCCTTGTTTGGACACAGCCCCAAGCTCTGCCGTCTGATTCAACTCGCCGTCTTGAAGAACCGGAGCCGCTCAAGACCAACAGAAGATCAACATAAGCAGCCATGGAGGAATAATGGGGTTGTCGATTCGGTTGTCGAAGATACTATCTTTTGTTCTTCAAGTATGGATTTGTCTGGAAATGATAAAGCTGGATCATGTGGATTCTCGTTTGGGAATTCGAAAGTTTATACTTCTGTGTTTGTTGCTCCTTCTTTTAGCTCTGGTGTTAGAAGTGAAAGAGAGATATGA MAATQSSKSSSQPTNLHQQISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGTSAKTNFPYDHGSFDSTIDEAQAQSLFGHSPKLCRLIQLAVLKNRSRSRPTEDQHKQPWRNNGVVDSVVEDTIFCSSSMDLSGNDKAGSCGFSFGNSKVYTSVFVAPSFSSGVRSEREI Homology
BLAST of Sed0022663 vs. NCBI nr
Match: XP_038878811.1 (ethylene-responsive transcription factor ERN1-like [Benincasa hispida]) HSP 1 Score: 266.5 bits (680), Expect = 1.7e-67 Identity = 146/201 (72.64%), Postives = 164/201 (81.59%), Query Frame = 0
BLAST of Sed0022663 vs. NCBI nr
Match: XP_022134768.1 (ethylene-responsive transcription factor 11-like [Momordica charantia]) HSP 1 Score: 245.4 bits (625), Expect = 4.2e-61 Identity = 142/201 (70.65%), Postives = 156/201 (77.61%), Query Frame = 0
BLAST of Sed0022663 vs. NCBI nr
Match: XP_031737158.1 (ethylene-responsive transcription factor ERN2 [Cucumis sativus]) HSP 1 Score: 242.3 bits (617), Expect = 3.5e-60 Identity = 136/199 (68.34%), Postives = 153/199 (76.88%), Query Frame = 0
BLAST of Sed0022663 vs. NCBI nr
Match: XP_016901366.1 (PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo] >KAA0058038.1 ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 238.8 bits (608), Expect = 3.9e-59 Identity = 137/203 (67.49%), Postives = 153/203 (75.37%), Query Frame = 0
BLAST of Sed0022663 vs. NCBI nr
Match: TYK11541.1 (ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 238.4 bits (607), Expect = 5.1e-59 Identity = 135/206 (65.53%), Postives = 153/206 (74.27%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.5e-18 Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 7.7e-18 Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17 Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17 Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.2e-16 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A6J1C2Y6 (ethylene-responsive transcription factor 11-like OS=Momordica charantia OX=3673 GN=LOC111006959 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 2.0e-61 Identity = 142/201 (70.65%), Postives = 156/201 (77.61%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A0A0LPP4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015755 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.7e-60 Identity = 136/199 (68.34%), Postives = 153/199 (76.88%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A5A7USB5 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003430 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59 Identity = 137/203 (67.49%), Postives = 153/203 (75.37%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A1S4DZE7 (ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494092 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59 Identity = 137/203 (67.49%), Postives = 153/203 (75.37%), Query Frame = 0
BLAST of Sed0022663 vs. ExPASy TrEMBL
Match: A0A5D3CI83 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37291G00010 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 2.5e-59 Identity = 135/206 (65.53%), Postives = 153/206 (74.27%), Query Frame = 0
BLAST of Sed0022663 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 ) HSP 1 Score: 91.3 bits (225), Expect = 9.4e-19 Identity = 40/59 (67.80%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Sed0022663 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 5.1e-17 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
BLAST of Sed0022663 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16 Identity = 47/81 (58.02%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of Sed0022663 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 ) HSP 1 Score: 82.4 bits (202), Expect = 4.3e-16 Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of Sed0022663 vs. TAIR 10
Match: AT1G36060.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 9.7e-16 Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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