Sed0022600 (gene) Chayote v1

Overview


Name	Sed0022600
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SOB FIVE-LIKE 6-like
Location	LG01: 21874695 .. 21875636 (+)
RNA-Seq Expression	Sed0022600
Synteny	Sed0022600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCATCTCTGACGTGTTCACAAACAGATAAAGGAAGCAAAGGCCAAAGGATACACTAACTCCATGATTTTAGTGAAGATTGTTTTGATCCCTTTTTCCCTTCAATAGAAATACAAGTTTTTGTTATATAAACATTCCAATCTTCATAACCTTTTTCCCTTCAAATTGCTTGCCACCATGAATGATTGGTCTGGTACACATCATTGCAGTGGAAGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTACACTTCAGACCATCGCTTCGGCGGCGGCGGTCCGAGTTGTAGGGAAAAAGAAGCAAAAGTAAGAGCAGAGGAAGAAGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCCCATTACCTTGAAGGCAAAGAGGAATACATTTACAATAATGGGTATTCTTCATATGCCTACTCAGCTTCAGAATCAGCATTAAATTGCAGTAAAAAATACAAAAAGAAGAAGAAGAACAGCAAACCAAATGGCAGAAACAAGCAACATTCTTACCTTGATGACACTGCTAGCTCCCCTGTTTATGGCTATGGAAAAACAAGTGTAAAGAACAGTTCCATTAGCTTTTTTTTCTCTTAAAAAATATCAATCAATCTCATGTTGTTGGTTTTTTATGCAGAAAACCAATGCAGCATCAAGCCACCAAGTCTTGGAGGAGAATGCTGTAGATTTTTCTCAGGGATTTTCTGCAACTCATTTTAAGGTAAGTTATTTCAGTTTAGTAAGTTCTTTTTGAATGTCTTGTTAAATAAAAACTGAAACTTTACTTATAAACACAGAGGAAATCAGCAGTGAGGAAACATTTTGGTTTTTATGGCTCTGAAAAATCAGCACCAGGAGAATAAGGCTCTACCACTTTACCGCAGCTTCCACTTTCTTTTTGACCGTCAAGTAAATGATAAGGACATGTTA

mRNA sequence

TGGCATCTCTGACGTGTTCACAAACAGATAAAGGAAGCAAAGGCCAAAGGATACACTAACTCCATGATTTTAGTGAAGATTGTTTTGATCCCTTTTTCCCTTCAATAGAAATACAAGTTTTTGTTATATAAACATTCCAATCTTCATAACCTTTTTCCCTTCAAATTGCTTGCCACCATGAATGATTGGTCTGGTACACATCATTGCAGTGGAAGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTACACTTCAGACCATCGCTTCGGCGGCGGCGGTCCGAGTTGTAGGGAAAAAGAAGCAAAAGTAAGAGCAGAGGAAGAAGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCCCATTACCTTGAAGGCAAAGAGGAATACATTTACAATAATGGGTATTCTTCATATGCCTACTCAGCTTCAGAATCAGCATTAAATTGCAGTAAAAAATACAAAAAGAAGAAGAAGAACAGCAAACCAAATGGCAGAAACAAGCAACATTCTTACCTTGATGACACTGCTAGCTCCCCTGTTTATGGCTATGGAAAAACAAGTAAAACCAATGCAGCATCAAGCCACCAAGTCTTGGAGGAGAATGCTGTAGATTTTTCTCAGGGATTTTCTGCAACTCATTTTAAGAGGAAATCAGCAGTGAGGAAACATTTTGGTTTTTATGGCTCTGAAAAATCAGCACCAGGAGAATAAGGCTCTACCACTTTACCGCAGCTTCCACTTTCTTTTTGACCGTCAAGTAAATGATAAGGACATGTTA

Coding sequence (CDS)

ATGAATGATTGGTCTGGTACACATCATTGCAGTGGAAGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTACACTTCAGACCATCGCTTCGGCGGCGGCGGTCCGAGTTGTAGGGAAAAAGAAGCAAAAGTAAGAGCAGAGGAAGAAGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCCCATTACCTTGAAGGCAAAGAGGAATACATTTACAATAATGGGTATTCTTCATATGCCTACTCAGCTTCAGAATCAGCATTAAATTGCAGTAAAAAATACAAAAAGAAGAAGAAGAACAGCAAACCAAATGGCAGAAACAAGCAACATTCTTACCTTGATGACACTGCTAGCTCCCCTGTTTATGGCTATGGAAAAACAAGTAAAACCAATGCAGCATCAAGCCACCAAGTCTTGGAGGAGAATGCTGTAGATTTTTCTCAGGGATTTTCTGCAACTCATTTTAAGAGGAAATCAGCAGTGAGGAAACATTTTGGTTTTTATGGCTCTGAAAAATCAGCACCAGGAGAATAA

Protein sequence

MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGGGPSCREKEAKVRAEEEEEDLSMVSDASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSYLDDTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEKSAPGE

Homology

[Close]

BLAST of Sed0022600 vs. NCBI nr
Match: XP_022977119.1 (uncharacterized protein LOC111477282 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 3.9e-69
Identity = 143/182 (78.57%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGGGPSCREKEAKVRAEE-EEEDLSMVSD 60
           MNDWS TH+CSG ESGWTMYLDQSYTSDHRFGGG      KEAK RAEE +EEDLSMVSD
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGV--KEAKARAEEADEEDLSMVSD 60

Query: 61  ASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSYLDD 120
           ASSGPPHYLE  EE  YNNGYSSYAYSAS+S +NCSK+ KKK K SK NGRN+Q SYLDD
Sbjct: 61  ASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 120

Query: 121 TASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEKSAP 180
           TASSPVYGYGK SK  AA+S++  EEN VDFSQGFSATHFKRKSA+RKH GFY SEKSAP
Sbjct: 121 TASSPVYGYGKASKIKAAASNKASEENPVDFSQGFSATHFKRKSAMRKHLGFYRSEKSAP 180

Query: 181 GE 182
            E
Sbjct: 181 EE 180

[Close]

BLAST of Sed0022600 vs. NCBI nr
Match: XP_022139584.1 (uncharacterized protein LOC111010447 isoform X1 [Momordica charantia])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 141/185 (76.22%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGG--GPSCREKEAKVRAEE--EEEDLSM 60
           MNDWS  H+CSG ESGWTMYLDQSY S+HRFGGG  G + REKEAKVR EE  EEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSY 120
           VSDASSGPPHYLE  E Y+YNNGYSSYAYSA+ESA NC    ++KKK  K +GRN+QHSY
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCK---EEKKKKGKKHGRNQQHSY 120

Query: 121 LDDTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEK 180
           LDDTASSPVYGYGK SK NAA S++  EENAVDFSQGFSATHFKRKS++RKH GF  SEK
Sbjct: 121 LDDTASSPVYGYGKASKINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEK 180

Query: 181 SAPGE 182
           SAP E
Sbjct: 181 SAPEE 182

[Close]

BLAST of Sed0022600 vs. NCBI nr
Match: XP_038897152.1 (protein SOB FIVE-LIKE 6-like [Benincasa hispida])

HSP 1 Score: 262.7 bits (670), Expect = 2.4e-66
Identity = 139/189 (73.54%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRF------GGGGPSCREKEAKVRA--EEEEE 60
           MNDWS TH+CSGSESGWTMYLDQSYTSDH F      GG G + + KEAK R   E+EEE
Sbjct: 1   MNDWSSTHYCSGSESGWTMYLDQSYTSDHHFCGSGGDGGVGENYKAKEAKARTEQEDEEE 60

Query: 61  DLSMVSDASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNK 120
           DLSMVSDASSGPPHY+E  EE  Y NGYSSYA+SASESA+NC+K+  KK K  K NGRN+
Sbjct: 61  DLSMVSDASSGPPHYIEDNEELFYTNGYSSYAFSASESAINCNKEEIKKGKKGKQNGRNQ 120

Query: 121 QHSYLDDTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFY 180
           QHSYLDDTASSPVYGY K SK N A S++ LEEN VDFSQGFSATHFKRKSA+RKH GFY
Sbjct: 121 QHSYLDDTASSPVYGYSKPSKINVAISNKALEENPVDFSQGFSATHFKRKSALRKHLGFY 180

Query: 181 GSEKSAPGE 182
            SEKSAP E
Sbjct: 181 RSEKSAPEE 189

[Close]

BLAST of Sed0022600 vs. NCBI nr
Match: XP_022139592.1 (uncharacterized protein LOC111010447 isoform X2 [Momordica charantia])

HSP 1 Score: 260.8 bits (665), Expect = 8.9e-66
Identity = 140/185 (75.68%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGG--GPSCREKEAKVRAEE--EEEDLSM 60
           MNDWS  H+CSG ESGWTMYLDQSY S+HRFGGG  G + REKEAKVR EE  EEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSY 120
           VSDASSGPPHYLE  E Y+YNNGYSSYAYSA+ESA NC    ++KKK  K +GRN+QHSY
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCK---EEKKKKGKKHGRNQQHSY 120

Query: 121 LDDTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEK 180
           LDDTASSPVYGYGK  K NAA S++  EENAVDFSQGFSATHFKRKS++RKH GF  SEK
Sbjct: 121 LDDTASSPVYGYGK--KINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEK 180

Query: 181 SAPGE 182
           SAP E
Sbjct: 181 SAPEE 180

[Close]

BLAST of Sed0022600 vs. NCBI nr
Match: XP_022936106.1 (uncharacterized protein LOC111442806 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 1.1e-63
Identity = 137/182 (75.27%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGGGPSCREKEAKVRAEE-EEEDLSMVSD 60
           MNDWS TH+CSG ESGWTMYLDQSYTSDHRFGGG      KEAK RAEE +EEDLSMVSD
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGV--KEAKARAEEADEEDLSMVSD 60

Query: 61  ASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSYLDD 120
           ASSGPPHYLE  EE  YNNGYSSYAYSAS+S +NCSK+ KKK K SK NGRN+Q SYLDD
Sbjct: 61  ASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 120

Query: 121 TASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEKSAP 180
           TASSPVYGYGK SK  AA+S++  EEN VDFSQGFSATHFKRKSA+RK       +KSAP
Sbjct: 121 TASSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFKRKSALRK-------QKSAP 173

Query: 181 GE 182
            E
Sbjct: 181 EE 173

[Close]

BLAST of Sed0022600 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.1e-13
Identity = 63/178 (35.39%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 11  SGSESGWTMYLDQSYTSD----HRFGGGGPSCREKE-------AKVRAEEEEEDLSMVSD 70
           SG ESGWT+YLDQS +S      R   G  S R  +            EEEE+DLSM+SD
Sbjct: 6   SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISD 65

Query: 71  ASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSYLDD 130
           ASSGP +  E                  S   +N     K+ K+  K     K +S LDD
Sbjct: 66  ASSGPRNISE----------------EDSVKKINIVGLKKQCKREKKRRDYEKMNSLLDD 125

Query: 131 TASSPVYGYGKTSKTNAASS--HQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSE 176
           TASSP++ +    + +   +   Q   E+ +D+SQGFSAT F+ K+A ++  G+   E
Sbjct: 126 TASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQCGYLHME 167

[Close]

BLAST of Sed0022600 vs. ExPASy Swiss-Prot
Match: B6IDH8 (Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 3   DWSGTHHCSGSESGWTMYLDQSYT-SDHRFGGGGPSCREKEAKVRAEEEEEDLSMVSDAS 62
           D+S   +    +SGWTMYL  S + S H F          E K   +E +ED SMVSDAS
Sbjct: 2   DFSDLDYSDAGDSGWTMYLGHSSSVSLHHF-----DYHNGETK---QEHDEDSSMVSDAS 61

Query: 63  SGPPHYLEG--KEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQ-HSYLD 122
           SGPP+Y E    E+++  N   +  +  S+S      K K KKK  +  G +++ +S  D
Sbjct: 62  SGPPYYCEETVHEDHLQQN---TQYWCKSKS----KNKNKNKKKVHEEQGYSERFNSSFD 121

Query: 123 DTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFS 156
           DTASS   G     + +A   HQ   +   DF Q +S
Sbjct: 122 DTASSLPVG----EEVSAHKQHQNQYQRFHDFCQSYS 139

[Close]

BLAST of Sed0022600 vs. ExPASy TrEMBL
Match: A0A6J1IQJ9 (uncharacterized protein LOC111477282 OS=Cucurbita maxima OX=3661 GN=LOC111477282 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 143/182 (78.57%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGGGPSCREKEAKVRAEE-EEEDLSMVSD 60
           MNDWS TH+CSG ESGWTMYLDQSYTSDHRFGGG      KEAK RAEE +EEDLSMVSD
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGV--KEAKARAEEADEEDLSMVSD 60

Query: 61  ASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSYLDD 120
           ASSGPPHYLE  EE  YNNGYSSYAYSAS+S +NCSK+ KKK K SK NGRN+Q SYLDD
Sbjct: 61  ASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 120

Query: 121 TASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEKSAP 180
           TASSPVYGYGK SK  AA+S++  EEN VDFSQGFSATHFKRKSA+RKH GFY SEKSAP
Sbjct: 121 TASSPVYGYGKASKIKAAASNKASEENPVDFSQGFSATHFKRKSAMRKHLGFYRSEKSAP 180

Query: 181 GE 182
            E
Sbjct: 181 EE 180

[Close]

BLAST of Sed0022600 vs. ExPASy TrEMBL
Match: A0A6J1CDG6 (uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010447 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.0e-68
Identity = 141/185 (76.22%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGG--GPSCREKEAKVRAEE--EEEDLSM 60
           MNDWS  H+CSG ESGWTMYLDQSY S+HRFGGG  G + REKEAKVR EE  EEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSY 120
           VSDASSGPPHYLE  E Y+YNNGYSSYAYSA+ESA NC    ++KKK  K +GRN+QHSY
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCK---EEKKKKGKKHGRNQQHSY 120

Query: 121 LDDTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEK 180
           LDDTASSPVYGYGK SK NAA S++  EENAVDFSQGFSATHFKRKS++RKH GF  SEK
Sbjct: 121 LDDTASSPVYGYGKASKINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEK 180

Query: 181 SAPGE 182
           SAP E
Sbjct: 181 SAPEE 182

[Close]

BLAST of Sed0022600 vs. ExPASy TrEMBL
Match: A0A6J1CED8 (uncharacterized protein LOC111010447 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010447 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.3e-66
Identity = 140/185 (75.68%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGG--GPSCREKEAKVRAEE--EEEDLSM 60
           MNDWS  H+CSG ESGWTMYLDQSY S+HRFGGG  G + REKEAKVR EE  EEEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSY 120
           VSDASSGPPHYLE  E Y+YNNGYSSYAYSA+ESA NC    ++KKK  K +GRN+QHSY
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCK---EEKKKKGKKHGRNQQHSY 120

Query: 121 LDDTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEK 180
           LDDTASSPVYGYGK  K NAA S++  EENAVDFSQGFSATHFKRKS++RKH GF  SEK
Sbjct: 121 LDDTASSPVYGYGK--KINAAPSNEASEENAVDFSQGFSATHFKRKSSLRKHMGFCRSEK 180

Query: 181 SAPGE 182
           SAP E
Sbjct: 181 SAPEE 180

[Close]

BLAST of Sed0022600 vs. ExPASy TrEMBL
Match: A0A6J1F6K7 (uncharacterized protein LOC111442806 OS=Cucurbita moschata OX=3662 GN=LOC111442806 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.3e-64
Identity = 137/182 (75.27%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRFGGGGPSCREKEAKVRAEE-EEEDLSMVSD 60
           MNDWS TH+CSG ESGWTMYLDQSYTSDHRFGGG      KEAK RAEE +EEDLSMVSD
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGV--KEAKARAEEADEEDLSMVSD 60

Query: 61  ASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSYLDD 120
           ASSGPPHYLE  EE  YNNGYSSYAYSAS+S +NCSK+ KKK K SK NGRN+Q SYLDD
Sbjct: 61  ASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 120

Query: 121 TASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSEKSAP 180
           TASSPVYGYGK SK  AA+S++  EEN VDFSQGFSATHFKRKSA+RK       +KSAP
Sbjct: 121 TASSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFKRKSALRK-------QKSAP 173

Query: 181 GE 182
            E
Sbjct: 181 EE 173

[Close]

BLAST of Sed0022600 vs. ExPASy TrEMBL
Match: A0A5D3D989 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002630 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.2e-62
Identity = 134/187 (71.66%), Postives = 146/187 (78.07%), Query Frame = 0


Query: 1   MNDWSGTHHCSGSESGWTMYLDQSYTSDHRF---GGGGPSCREKEAKVRAEE---EEEDL 60
           MNDWS TH+CSGSESGWTMYLDQSYTSDHRF    GG  + + KEAK R EE   EEEDL
Sbjct: 1   MNDWSATHYCSGSESGWTMYLDQSYTSDHRFNGGSGGSENYKAKEAKARTEEEEDEEEDL 60

Query: 61  SMVSDASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQH 120
           SMVSDASSGPPHY+E  EE  YNNGYSSYA SASE         +KK +  K NGRN+QH
Sbjct: 61  SMVSDASSGPPHYIEDNEELFYNNGYSSYAISASELE-------RKKSQKGKRNGRNQQH 120

Query: 121 SYLDDTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGS 180
           SYLDDTASSPVYGY K +K N A+S++ LEEN VDFSQGFSATHFKRKSA+RKH GFY S
Sbjct: 121 SYLDDTASSPVYGYTKANKINTATSNKALEENPVDFSQGFSATHFKRKSALRKHLGFYRS 180

Query: 181 EKSAPGE 182
           EKSAP E
Sbjct: 181 EKSAPEE 180

[Close]

BLAST of Sed0022600 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-14
Identity = 63/178 (35.39%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 11  SGSESGWTMYLDQSYTSD----HRFGGGGPSCREKE-------AKVRAEEEEEDLSMVSD 70
           SG ESGWT+YLDQS +S      R   G  S R  +            EEEE+DLSM+SD
Sbjct: 6   SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISD 65

Query: 71  ASSGPPHYLEGKEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQHSYLDD 130
           ASSGP +  E                  S   +N     K+ K+  K     K +S LDD
Sbjct: 66  ASSGPRNISE----------------EDSVKKINIVGLKKQCKREKKRRDYEKMNSLLDD 125

Query: 131 TASSPVYGYGKTSKTNAASS--HQVLEENAVDFSQGFSATHFKRKSAVRKHFGFYGSE 176
           TASSP++ +    + +   +   Q   E+ +D+SQGFSAT F+ K+A ++  G+   E
Sbjct: 126 TASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQCGYLHME 167

[Close]

BLAST of Sed0022600 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 3   DWSGTHHCSGSESGWTMYLDQSYT-SDHRFGGGGPSCREKEAKVRAEEEEEDLSMVSDAS 62
           D+S   +    +SGWTMYL  S + S H F          E K   +E +ED SMVSDAS
Sbjct: 2   DFSDLDYSDAGDSGWTMYLGHSSSVSLHHF-----DYHNGETK---QEHDEDSSMVSDAS 61

Query: 63  SGPPHYLEG--KEEYIYNNGYSSYAYSASESALNCSKKYKKKKKNSKPNGRNKQ-HSYLD 122
           SGPP+Y E    E+++  N   +  +  S+S      K K KKK  +  G +++ +S  D
Sbjct: 62  SGPPYYCEETVHEDHLQQN---TQYWCKSKS----KNKNKNKKKVHEEQGYSERFNSSFD 121

Query: 123 DTASSPVYGYGKTSKTNAASSHQVLEENAVDFSQGFS 156
           DTASS   G     + +A   HQ   +   DF Q +S
Sbjct: 122 DTASSLPVG----EEVSAHKQHQNQYQRFHDFCQSYS 139

The following BLAST results are available for this feature:

BLAST of Sed0022600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977119.1	3.9e-69	78.57	uncharacterized protein LOC111477282 [Cucurbita maxima]	[more]
XP_022139584.1	1.2e-67	76.22	uncharacterized protein LOC111010447 isoform X1 [Momordica charantia]	[more]
XP_038897152.1	2.4e-66	73.54	protein SOB FIVE-LIKE 6-like [Benincasa hispida]	[more]
XP_022139592.1	8.9e-66	75.68	uncharacterized protein LOC111010447 isoform X2 [Momordica charantia]	[more]
XP_022936106.1	1.1e-63	75.27	uncharacterized protein LOC111442806 [Cucurbita moschata]	[more]

BLAST of Sed0022600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	3.1e-13	35.39	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]
B6IDH8	1.4e-05	35.67	Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1	[more]

BLAST of Sed0022600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQJ9	1.9e-69	78.57	uncharacterized protein LOC111477282 OS=Cucurbita maxima OX=3661 GN=LOC111477282...	[more]
A0A6J1CDG6	6.0e-68	76.22	uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CED8	4.3e-66	75.68	uncharacterized protein LOC111010447 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1F6K7	5.3e-64	75.27	uncharacterized protein LOC111442806 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]
A0A5D3D989	2.2e-62	71.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0022600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	2.2e-14	35.39	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G58460.1	1.0e-06	35.67	unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..124
None	No IPR available	PANTHER	PTHR33347:SF40	SUBFAMILY NOT NAMED	coord: 1..176
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 1..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022600.1	Sed0022600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process