Sed0022572 (gene) Chayote v1

Overview


Name	Sed0022572
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein SKIP14-like
Location	LG03: 42227089 .. 42229194 (-)
RNA-Seq Expression	Sed0022572
Synteny	Sed0022572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTAATTTTTCCCGTCGTCCTATCTTTCCCCTGCACCTTACTGAGGAAAATTTAGTTTCTCCAATGAGGGTTACCCATGGTTATATGGTGGAAGGCATTCCTGAGAATAATGCTGAATGGCATTGTAGCCGGGAGGTCGATGTCGATGTTTGTTTTGATCGCGGAAAGGATATAGGTTCAGATAACTTGCAGGACCCTGTGACCAATGACATTCTTGACGTTTTACCTGCTGACCCATTTGGAATGGATATAAGTACCACTTTCACAGCAATTACAGGATGGCTTGAGGACATGGAAGTGGACTATGCTGAGTGTGTTGGCGTTGGCGACCGGGGTGGTGCTGGCGAAGGGAATATTGAGCTATTTGCAGGTCTGAATTTTATCTGGAACAATGCTATGAAGTTCCAAGTGTTTCCGGAGATAAATGGAATTGTTCAGAAGCCTAATCCTATGTGTGGCTGTAATGTGACCTGCTGTTGTGATTTTGGATCCATTTGTAGTATGGATGAAGTATCTTTTGCTAATGACAATCCTCCTAGCTGTTGTGGGCAGCAGGCTGCAGAATATCCGGAGCACAATGGCGTCTATTGGGAGGTAGACGGAGAAGCTCCTCATGCCGCCTTGAACTTTTCCCTTTATTATCTGGGTGTTCGGGATCTACTATCTGTTGGAAGGGTTTGCAGAACTCTGCATTCAGCAGTACAAGGAGACCCCCTTTTATGGAGGAACATTCACATAGATCAACCATTGAATGAGAAGATTACTGATGATATTCTTTTGCAATTAACTGATAGGGCTCTAGGTAACCTGCAATGCTTGAGTCTGGTGGAATGCTCGAAAATTACAGATGAGGGTCTGAAGCGGGTGCTTGAAAGCAATCCTAGGATTACAAAAGTAAGTATAGCTTGTTCCATTTTTGCTCTTTTATAATTAGCTGAATCTGTTTAGTTATTTAGTTTGTAATTTCTGTTTTTGTTTGATCATTTACATAGGGTTAAGCAGTTTATTCTCCGTTAACTTTGAAATGTTCCTAGTTTAGTTCATTTGATTATTTTTTATAATAATAATAATAATAATAATAATAAAAAGCTTGATGTTATTAATCATACTGTTACTAGAGAGCCTTGTACATACTTTTTGCTTTCTGTTATTTAGCCTGAACATTGTCCTAGTTTTGTAATGATATCTTTTCAGAAACAGAGGCTTGCTTATTGATACGTTGAAGAGTATTACAAATATTGGGAACCTATATAGGCTATTGTAGTTAGGATGTCTTATGCTAATAGCCCAAAAGTGGCTTATGTCAGCATTTGCATATCCACAGCAACTTGCCATTTTTAAGAATTAGGACAGATTCTTGAGACACGTTTAACCAGATGTATCTTTGGCATGCGTTTGACCCTAGCATTGCACCAAAAAAGGAAAATTAGTGTCCTAAAGGGATACTTTATTTAGTGTGCATTTTTTTTCTTAGCACTAAATCATACTTATTATTTACCAACTGAGCATGTTACTAAAATATTTGTCCTCTGCATGTTTATCCAGTTGTCTGTTCCTGGATGTACTAGACTCAGTATTGAAGGTATTATTAATAACTTGAGGGCTTTCAAGATGACGAGTACCCAAGGAGTGAAACGTCTAAGAATTGGTGGATTATATGGGGTGACTCAAGACCATTTTGAAGAGTTGAAGTTCTTATTGGGAAGTGACTGCAGCCTTGTGCAGCAAAATTCTCATAAGCCACATTTTTATCAAAGGGGTAACTTTTATGTTTCTGATGATGATGAACGTGCTATTGATATTGAAGTATGTCCAAGATGCGAAAACCTGAGGCTTGTCTACGATTGCCCAGCGGATGATTGTCAGGGACAAGGACATTCAACTCAGGCATGTAGGGCTTGCACACTTTGTATTTCGCGGTGTGTTCAGTGTGGTCGATGTGTCGATGAAAATGAGTATGTGGAAACATTTTGTTTGGAGTTGCTTTGCTCAGATTGCTGGAAGCCATTAGTGAAGTGTGAAGAGAAAGAAGATTGGAGGGATCAGTCTGCCCCATTTCATTTTGGGGAACAGGGAGATGGCGTTTATCTTCATGGCTAG

mRNA sequence

ATGGCTCTTAATTTTTCCCGTCGTCCTATCTTTCCCCTGCACCTTACTGAGGAAAATTTAGTTTCTCCAATGAGGGTTACCCATGGTTATATGGTGGAAGGCATTCCTGAGAATAATGCTGAATGGCATTGTAGCCGGGAGGTCGATGTCGATGTTTGTTTTGATCGCGGAAAGGATATAGGTTCAGATAACTTGCAGGACCCTGTGACCAATGACATTCTTGACGTTTTACCTGCTGACCCATTTGGAATGGATATAAGTACCACTTTCACAGCAATTACAGGATGGCTTGAGGACATGGAAGTGGACTATGCTGAGTGTGTTGGCGTTGGCGACCGGGGTGGTGCTGGCGAAGGGAATATTGAGCTATTTGCAGGTCTGAATTTTATCTGGAACAATGCTATGAAGTTCCAAGTGTTTCCGGAGATAAATGGAATTGTTCAGAAGCCTAATCCTATGTGTGGCTGTAATGTGACCTGCTGTTGTGATTTTGGATCCATTTGTAGTATGGATGAAGTATCTTTTGCTAATGACAATCCTCCTAGCTGTTGTGGGCAGCAGGCTGCAGAATATCCGGAGCACAATGGCGTCTATTGGGAGGTAGACGGAGAAGCTCCTCATGCCGCCTTGAACTTTTCCCTTTATTATCTGGGTGTTCGGGATCTACTATCTGTTGGAAGGGTTTGCAGAACTCTGCATTCAGCAGTACAAGGAGACCCCCTTTTATGGAGGAACATTCACATAGATCAACCATTGAATGAGAAGATTACTGATGATATTCTTTTGCAATTAACTGATAGGGCTCTAGGTAACCTGCAATGCTTGAGTCTGGTGGAATGCTCGAAAATTACAGATGAGGGTCTGAAGCGGGTGCTTGAAAGCAATCCTAGGATTACAAAATTGTCTGTTCCTGGATGTACTAGACTCAGTATTGAAGGTATTATTAATAACTTGAGGGCTTTCAAGATGACGAGTACCCAAGGAGTGAAACGTCTAAGAATTGGTGGATTATATGGGGTGACTCAAGACCATTTTGAAGAGTTGAAGTTCTTATTGGGAAGTGACTGCAGCCTTGTGCAGCAAAATTCTCATAAGCCACATTTTTATCAAAGGGGTAACTTTTATGTTTCTGATGATGATGAACGTGCTATTGATATTGAAGTATGTCCAAGATGCGAAAACCTGAGGCTTGTCTACGATTGCCCAGCGGATGATTGTCAGGGACAAGGACATTCAACTCAGGCATGTAGGGCTTGCACACTTTGTATTTCGCGGTGTGTTCAGTGTGGTCGATGTGTCGATGAAAATGAGTATGTGGAAACATTTTGTTTGGAGTTGCTTTGCTCAGATTGCTGGAAGCCATTAGTGAAGTGTGAAGAGAAAGAAGATTGGAGGGATCAGTCTGCCCCATTTCATTTTGGGGAACAGGGAGATGGCGTTTATCTTCATGGCTAG

Coding sequence (CDS)

ATGGCTCTTAATTTTTCCCGTCGTCCTATCTTTCCCCTGCACCTTACTGAGGAAAATTTAGTTTCTCCAATGAGGGTTACCCATGGTTATATGGTGGAAGGCATTCCTGAGAATAATGCTGAATGGCATTGTAGCCGGGAGGTCGATGTCGATGTTTGTTTTGATCGCGGAAAGGATATAGGTTCAGATAACTTGCAGGACCCTGTGACCAATGACATTCTTGACGTTTTACCTGCTGACCCATTTGGAATGGATATAAGTACCACTTTCACAGCAATTACAGGATGGCTTGAGGACATGGAAGTGGACTATGCTGAGTGTGTTGGCGTTGGCGACCGGGGTGGTGCTGGCGAAGGGAATATTGAGCTATTTGCAGGTCTGAATTTTATCTGGAACAATGCTATGAAGTTCCAAGTGTTTCCGGAGATAAATGGAATTGTTCAGAAGCCTAATCCTATGTGTGGCTGTAATGTGACCTGCTGTTGTGATTTTGGATCCATTTGTAGTATGGATGAAGTATCTTTTGCTAATGACAATCCTCCTAGCTGTTGTGGGCAGCAGGCTGCAGAATATCCGGAGCACAATGGCGTCTATTGGGAGGTAGACGGAGAAGCTCCTCATGCCGCCTTGAACTTTTCCCTTTATTATCTGGGTGTTCGGGATCTACTATCTGTTGGAAGGGTTTGCAGAACTCTGCATTCAGCAGTACAAGGAGACCCCCTTTTATGGAGGAACATTCACATAGATCAACCATTGAATGAGAAGATTACTGATGATATTCTTTTGCAATTAACTGATAGGGCTCTAGGTAACCTGCAATGCTTGAGTCTGGTGGAATGCTCGAAAATTACAGATGAGGGTCTGAAGCGGGTGCTTGAAAGCAATCCTAGGATTACAAAATTGTCTGTTCCTGGATGTACTAGACTCAGTATTGAAGGTATTATTAATAACTTGAGGGCTTTCAAGATGACGAGTACCCAAGGAGTGAAACGTCTAAGAATTGGTGGATTATATGGGGTGACTCAAGACCATTTTGAAGAGTTGAAGTTCTTATTGGGAAGTGACTGCAGCCTTGTGCAGCAAAATTCTCATAAGCCACATTTTTATCAAAGGGGTAACTTTTATGTTTCTGATGATGATGAACGTGCTATTGATATTGAAGTATGTCCAAGATGCGAAAACCTGAGGCTTGTCTACGATTGCCCAGCGGATGATTGTCAGGGACAAGGACATTCAACTCAGGCATGTAGGGCTTGCACACTTTGTATTTCGCGGTGTGTTCAGTGTGGTCGATGTGTCGATGAAAATGAGTATGTGGAAACATTTTGTTTGGAGTTGCTTTGCTCAGATTGCTGGAAGCCATTAGTGAAGTGTGAAGAGAAAGAAGATTGGAGGGATCAGTCTGCCCCATTTCATTTTGGGGAACAGGGAGATGGCGTTTATCTTCATGGCTAG

Protein sequence

MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAEWHCSREVDVDVCFDRGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGGAGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGCNVTCCCDFGSICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSVGRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHFEELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADDCQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWRDQSAPFHFGEQGDGVYLHG

Homology

[Close]

BLAST of Sed0022572 vs. NCBI nr
Match: KAG6585201.1 (F-box protein SKIP14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020119.1 F-box protein SKIP14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 807.7 bits (2085), Expect = 5.2e-230
Identity = 388/499 (77.76%), Postives = 429/499 (85.97%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFS RPIFPLH +E+NLVSPMR+ +GY+V+GI ENNAE     WH  RE  VD CFD
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGKLWHLGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
           RGKDI SD+ Q P T DILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC  V DRGG
Sbjct: 61  RGKDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC--VSDRGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
           AGEGN ELFAGLNFIWNNA+KFQ FPEI  IVQKPNPMC C          +VTCCCDFG
Sbjct: 121 AGEGNAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFG 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICS+ EVS AND+PP+ C QQ AE  E N +YWEVDG APH  L+F+LYYLG++DL S+
Sbjct: 181 SICSVTEVSSANDDPPTYCEQQVAECQEQNCIYWEVDGGAPHEGLSFALYYLGIQDLCSI 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVCR+LHS VQGDPLLW NIHIDQPLNEKI++DILLQLT+RALGNLQCLSLVEC +ITD
Sbjct: 241 GRVCRSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK VLESNPR+TKLSVPGCTRLSIEG+I++LRAFK+TST GVKRLRIGGLYGVTQ+HF
Sbjct: 301 EGLKCVLESNPRLTKLSVPGCTRLSIEGVISSLRAFKLTSTHGVKRLRIGGLYGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           +ELKFLLGSDC+L+Q++S+KPHFY RGNFYVS DDERAIDIE+CPRCEN RLVYDCPAD 
Sbjct: 361 KELKFLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           CQG G +TQACRACTLCI RCVQCGRCV+ENEYVETF LELLCSDCWKPL+KC EK+D R
Sbjct: 421 CQGSGLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQDCR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
           DQSAP   GEQ DG +LHG
Sbjct: 481 DQSAP---GEQEDGFFLHG 492

[Close]

BLAST of Sed0022572 vs. NCBI nr
Match: XP_022951163.1 (F-box protein SKIP14-like [Cucurbita moschata])

HSP 1 Score: 806.6 bits (2082), Expect = 1.2e-229
Identity = 387/499 (77.56%), Postives = 429/499 (85.97%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFS RPIFPLH +E+NLVSPMR+ +GY+V+GI ENNAE     WH  RE  VD CFD
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGKLWHLGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
           RGKDI SD+ Q P T DILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC  V DRGG
Sbjct: 61  RGKDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC--VSDRGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
           AGEGN ELFAGLNFIWNNA+KFQ FPEI  IVQKPNPMC C          +VTCCCDFG
Sbjct: 121 AGEGNAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFG 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICS+ EVS AND+PP+ C QQ AE  + N +YWEVDG APH  L+F+LYYLG++DL S+
Sbjct: 181 SICSVTEVSSANDDPPTYCEQQVAECQDQNCIYWEVDGGAPHEGLSFALYYLGIQDLCSI 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVCR+LHS VQGDPLLW NIHIDQPLNEKI++DILLQLT+RALGNLQCLSLVEC +ITD
Sbjct: 241 GRVCRSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK VLESNPR+TKLSVPGCTRLSIEG+I++LRAFK+TST GVKRLRIGGLYGVTQ+HF
Sbjct: 301 EGLKCVLESNPRLTKLSVPGCTRLSIEGVISSLRAFKLTSTHGVKRLRIGGLYGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           +ELKFLLGSDC+L+Q++S+KPHFY RGNFYVS DDERAIDIE+CPRCEN RLVYDCPAD 
Sbjct: 361 KELKFLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           CQG G +TQACRACTLCI RCVQCGRCV+ENEYVETF LELLCSDCWKPL+KC EK+D R
Sbjct: 421 CQGSGLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQDCR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
           DQSAP   GEQ DG +LHG
Sbjct: 481 DQSAP---GEQEDGFFLHG 492

[Close]

BLAST of Sed0022572 vs. NCBI nr
Match: XP_023537250.1 (F-box protein SKIP14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 805.4 bits (2079), Expect = 2.6e-229
Identity = 387/499 (77.56%), Postives = 428/499 (85.77%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFS RPIFPLH +E+NLVSPMR+ +GY+V+GI ENNAE     WH  RE  VD CFD
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGKLWHLGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
           RGKDI SD+ Q P T DILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC  V DRGG
Sbjct: 61  RGKDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC--VSDRGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
           AGEGN ELFAGLNFIWNNA+KFQ FPEI  IVQKPNPMC C          +VTCCCDFG
Sbjct: 121 AGEGNAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFG 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICS+ EVS AND+PP+ C QQ AE  E N +YWEVDG APH  L+F+LYYLGV+DL S+
Sbjct: 181 SICSVTEVSSANDDPPTYCEQQVAECQEQNCIYWEVDGGAPHEGLSFALYYLGVQDLCSI 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVCR+LHS VQGDPLLW NIHIDQPLNEKI++DILLQLT+RALGNLQCLSLVEC +ITD
Sbjct: 241 GRVCRSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK VLESNPR+T LSVPGCTRLSIEG+I++LRAFK+TST GVKRLRIGG+YGVTQ+HF
Sbjct: 301 EGLKCVLESNPRLTNLSVPGCTRLSIEGVISSLRAFKLTSTHGVKRLRIGGIYGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           +ELKFLLGSDC+L+Q++S+KPHFY RGNFYVS DDERAIDIE+CPRCEN RLVYDCPAD 
Sbjct: 361 KELKFLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           CQG G +TQACRACTLCI RCVQCGRCV+ENEYVETF LELLCSDCWKPL+KC EK+D R
Sbjct: 421 CQGNGLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQDCR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
           DQSAP   GEQ DG +LHG
Sbjct: 481 DQSAP---GEQEDGFFLHG 492

[Close]

BLAST of Sed0022572 vs. NCBI nr
Match: XP_023001987.1 (F-box protein SKIP14-like [Cucurbita maxima])

HSP 1 Score: 800.4 bits (2066), Expect = 8.4e-228
Identity = 387/499 (77.56%), Postives = 428/499 (85.77%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFS RPIFPLH +E+NLVSPMR+ +GY+V+GI ENNAE     +H  RE  VD CFD
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGRLFHLGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
           RGKDI SD+ Q P T DILDVLPADPFGMDISTTFTAITGWL+DMEVDYAEC  V DRGG
Sbjct: 61  RGKDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLKDMEVDYAEC--VSDRGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
           AGEGN ELFAGLNFIWNNA+KFQ FPEI  IVQKPNPMC C          +VTCCCDFG
Sbjct: 121 AGEGNAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFG 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICS+ EVS AND+PPS C QQ AE  E N +YWEVDG APH  L+F+LYYLGV+DL S+
Sbjct: 181 SICSVTEVSSANDDPPSYCEQQVAECQEQNCIYWEVDGGAPHEGLSFALYYLGVQDLCSI 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVCR+LHS VQGDPLLW NIHIDQPLNEKI++DILLQLT+RALGNLQCLSLVEC +ITD
Sbjct: 241 GRVCRSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK VLESNPR+TKLSVPGCTRLSIEG+I++LRAFK+TSTQGVKRLRIGGLYGVTQ+HF
Sbjct: 301 EGLKCVLESNPRLTKLSVPGCTRLSIEGVISSLRAFKLTSTQGVKRLRIGGLYGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           +ELKFLLGSDC+L+Q++S+KPHFY RGNFYVS DDERAIDIE+CPRCEN RLVYDCPAD 
Sbjct: 361 KELKFLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           C G G +TQACRACTLCI RCVQCGRCV+ENEYVETF LELLCSDCWKPL+KC EK+D R
Sbjct: 421 CPGGGLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQDCR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
           DQSAP    EQ DG +LHG
Sbjct: 481 DQSAPV---EQEDGFFLHG 492

[Close]

BLAST of Sed0022572 vs. NCBI nr
Match: XP_023546191.1 (F-box protein SKIP14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 780.8 bits (2015), Expect = 6.9e-222
Identity = 372/499 (74.55%), Postives = 419/499 (83.97%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFSRRPIFPLHL+E+N+VSPMR+ +GY+VEGIPENN E     WHC RE  VD CFD
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHCGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
              DI SD+ QDPV+ DILD+LPADPFGMDISTTFTA+TGWLEDMEVDYAEC  V D GG
Sbjct: 61  HRNDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAEC--VRDGGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
            GE N+ELFAGLNF WNNA+KFQ FPEI GIVQKP+PMC C          +V+C CDF 
Sbjct: 121 TGERNVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDEKETGDVSCSCDFR 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICSMDEVSFA+D+PPSCCGQQAAE  E + +Y EVDG APHA L+F+L YLGVRDLLSV
Sbjct: 181 SICSMDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSV 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVC++LHS VQGDPLLWRNIHI+QPLNEKITDDILLQL++RALGNLQCLSLVEC +ITD
Sbjct: 241 GRVCKSLHSVVQGDPLLWRNIHIEQPLNEKITDDILLQLSNRALGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK VLESNPR+TKL VPGCTRLSIEG++++LRAFK+TS QGVK LRIGGL+GVTQ+HF
Sbjct: 301 EGLKHVLESNPRLTKLCVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           EELKFLLGS CSL  QNS+KPHFY RGNFYVS DDERAIDIE CPRCENLRLVYDCP D 
Sbjct: 361 EELKFLLGSGCSLKPQNSYKPHFYHRGNFYVSCDDERAIDIEKCPRCENLRLVYDCPVDG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           CQG+ ++ QACRACTLCISRC+QCGRC++ENE+VETF LELLCS CWKP ++C E+ DWR
Sbjct: 421 CQGKEYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECREERDWR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
                    EQ D  +LHG
Sbjct: 481 ---------EQEDDFFLHG 486

[Close]

BLAST of Sed0022572 vs. ExPASy Swiss-Prot
Match: Q9LU91 (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.7e-104
Identity = 223/485 (45.98%), Postives = 293/485 (60.41%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAEWHCSREVDVDVCFDRG-KD 60
           MALNFS RP F  HL+EE    PM + +G            W CS        FD G K+
Sbjct: 1   MALNFSHRP-FSSHLSEE----PMMIANG-----------NW-CS-------SFDNGRKN 60

Query: 61  IGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG--AG 120
            G     D  + DILDVLP+DPFGMDI+ TFTAITGWLED+E DY    G   R     G
Sbjct: 61  TGG----DASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIWIG 120

Query: 121 EGN-IELFAGLNFIWNNAMKFQ------------------------VFPEINGIVQKPNP 180
           +GN  +LFAGL+F WNNAM+FQ                         FPE +G       
Sbjct: 121 DGNRQQLFAGLSFFWNNAMQFQSSGYSYGSESLFGGAFDGSLFSTCKFPESSGENNGFGG 180

Query: 181 MCGCNVTCCCDFGSICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNF 240
               + +C   F S  S+DEV  +++N  +  G+        N    E D    H A+ F
Sbjct: 181 ALDGDGSCHGAFISASSVDEV-LSHENARN--GEVVGSSDRCNN--GEEDAYV-HPAIGF 240

Query: 241 SLYYLGVRDLLSVGRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNL 300
            LY+L  +DLLSV  VC++LH+ V  D LLW++IHI +PLNEKIT++ LL LT+RA G +
Sbjct: 241 CLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERAQGTM 300

Query: 301 QCLSLVECSKITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRL 360
           QCL +V+C +ITD+ LKRV+  N ++ K+ VPGCTR++I+GI++ LR  K      VK L
Sbjct: 301 QCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGKLQVKHL 360

Query: 361 RIGGLYGVTQDHFEELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRC 420
           ++ GL+GVT+DH++EL  LL  D + V+Q   KP FY RG   VS DD+RA+DIE+CP+C
Sbjct: 361 QLRGLFGVTKDHYDELIDLLNID-NKVKQTIQKPRFYHRGEACVSCDDDRALDIEMCPKC 420

Query: 421 ENLRLVYDCPADDCQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCW 458
           +N +LVYDCPA+DC+G+   ++ CRAC+LCI RC  CGRC+ + EY E FCLELLC+ C 
Sbjct: 421 QNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEEMFCLELLCAVCS 450

[Close]

BLAST of Sed0022572 vs. ExPASy Swiss-Prot
Match: Q9LK24 (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.3e-53
Identity = 115/255 (45.10%), Postives = 156/255 (61.18%), Query Frame = 0


Query: 203 GEAPHAALNFSLYYLGVRDLLSVGRVCRTLHSAVQGDPLLWRNIHI-DQPLNEKITDDIL 262
           GEA H A    L YL ++++L+V  VCR+L  +V  +P  W +I + D  L  ++TD+ L
Sbjct: 125 GEA-HDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESL 184

Query: 263 LQLTDRALGNLQCLSLVECSKITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAF 322
           L+LT RALG ++CL+L  C  ITD GLK+VL SNP +TKLSV GC RLS  G+++ LR  
Sbjct: 185 LKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDL 244

Query: 323 KMTSTQGVKRLRIGGLYGVTQDHFEELKFLLGSDCSLVQQNSHKPHFYQ--RGNFYVSDD 382
           K ++  GVK L  GG    T++ F+EL  LLG D  +  Q   K  FY   R  FY+ DD
Sbjct: 245 KSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQ-ERKKRFYTSCRSEFYLEDD 304

Query: 383 DERAIDIEVCPRCENLRLVYDCPADDCQGQG---HSTQACRACTLCISRCVQCGRCVDEN 442
             R  D+E+CP CE   LV+DCPAD C  +G   +S  +CRAC +CI RC +CG C+++ 
Sbjct: 305 --RVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDC 364

Query: 443 EYVETFCLELLCSDC 452
           E  + FC    C  C
Sbjct: 365 EN-KPFCFAFSCVVC 374

[Close]

BLAST of Sed0022572 vs. ExPASy Swiss-Prot
Match: Q9ZU90 (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.4e-36
Identity = 87/264 (32.95%), Postives = 140/264 (53.03%), Query Frame = 0


Query: 200 EVDGEAPHAALNFSLYYL-GVRDLLSVGRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITD 259
           E +  + H  L   L YL  + +LLS+ RV R+L  A++ +  LW  + I+ PL+ ++TD
Sbjct: 10  EEEWRSVHEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTD 69

Query: 260 DILLQLTDRALGNLQCLSLVECSKITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNL 319
           DIL + + ++ G L+ L L +C  +T++GL+RV+++NP ITK+ VPGC+ L+ EGI+  +
Sbjct: 70  DILSEFSSKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECV 129

Query: 320 RAFKMTSTQGVKRLRIGGLYGVTQDHFEELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSD 379
            +    + + ++ L I G+ G T+ H   L   L S                        
Sbjct: 130 ESLSKNNHK-LETLHINGVNGFTKQHLSALYTYLSS------------------------ 189

Query: 380 DDERAIDIEVCPRCENLRLVYDCPADDCQGQGHSTQACRACTLCISRCVQCGRCV--DEN 439
             E  ID+EVCP+C+ +R++  C  + C       + CR C LCI RC +C  C+   + 
Sbjct: 190 --EGTIDLEVCPKCDEVRMIPSCSRESC---NQKQRKCRGCWLCIPRCAECAVCLVGSDT 243

Query: 440 EYVETFC--LELLCSDCWKPLVKC 459
           E  E  C   ++LC +CW  L KC
Sbjct: 250 ESQEAACGNDDVLCLECWLVLPKC 243

[Close]

BLAST of Sed0022572 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.9e-05
Identity = 35/109 (32.11%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 222 LLSVGRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECS 281
           L S+GR C +L     G   LW N+         ITD+ LL++ +     L+ L L  CS
Sbjct: 169 LRSIGRSCPSL-----GSLSLW-NV-------STITDNGLLEIAE-GCAQLEKLELNRCS 228

Query: 282 KITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVK 331
            ITD+GL  + +S P +T+L++  C+R+  EG++   R+     +  +K
Sbjct: 229 TITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIK 263

[Close]

BLAST of Sed0022572 vs. ExPASy TrEMBL
Match: A0A6J1GGY1 (F-box protein SKIP14-like OS=Cucurbita moschata OX=3662 GN=LOC111454091 PE=4 SV=1)

HSP 1 Score: 806.6 bits (2082), Expect = 5.7e-230
Identity = 387/499 (77.56%), Postives = 429/499 (85.97%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFS RPIFPLH +E+NLVSPMR+ +GY+V+GI ENNAE     WH  RE  VD CFD
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGKLWHLGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
           RGKDI SD+ Q P T DILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC  V DRGG
Sbjct: 61  RGKDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAEC--VSDRGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
           AGEGN ELFAGLNFIWNNA+KFQ FPEI  IVQKPNPMC C          +VTCCCDFG
Sbjct: 121 AGEGNAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFG 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICS+ EVS AND+PP+ C QQ AE  + N +YWEVDG APH  L+F+LYYLG++DL S+
Sbjct: 181 SICSVTEVSSANDDPPTYCEQQVAECQDQNCIYWEVDGGAPHEGLSFALYYLGIQDLCSI 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVCR+LHS VQGDPLLW NIHIDQPLNEKI++DILLQLT+RALGNLQCLSLVEC +ITD
Sbjct: 241 GRVCRSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK VLESNPR+TKLSVPGCTRLSIEG+I++LRAFK+TST GVKRLRIGGLYGVTQ+HF
Sbjct: 301 EGLKCVLESNPRLTKLSVPGCTRLSIEGVISSLRAFKLTSTHGVKRLRIGGLYGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           +ELKFLLGSDC+L+Q++S+KPHFY RGNFYVS DDERAIDIE+CPRCEN RLVYDCPAD 
Sbjct: 361 KELKFLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           CQG G +TQACRACTLCI RCVQCGRCV+ENEYVETF LELLCSDCWKPL+KC EK+D R
Sbjct: 421 CQGSGLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQDCR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
           DQSAP   GEQ DG +LHG
Sbjct: 481 DQSAP---GEQEDGFFLHG 492

[Close]

BLAST of Sed0022572 vs. ExPASy TrEMBL
Match: A0A6J1KI68 (F-box protein SKIP14-like OS=Cucurbita maxima OX=3661 GN=LOC111496006 PE=4 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 4.1e-228
Identity = 387/499 (77.56%), Postives = 428/499 (85.77%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFS RPIFPLH +E+NLVSPMR+ +GY+V+GI ENNAE     +H  RE  VD CFD
Sbjct: 1   MALNFSCRPIFPLHHSEDNLVSPMRIANGYIVDGIHENNAESCGRLFHLGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
           RGKDI SD+ Q P T DILDVLPADPFGMDISTTFTAITGWL+DMEVDYAEC  V DRGG
Sbjct: 61  RGKDICSDSSQGPGTEDILDVLPADPFGMDISTTFTAITGWLKDMEVDYAEC--VSDRGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
           AGEGN ELFAGLNFIWNNA+KFQ FPEI  IVQKPNPMC C          +VTCCCDFG
Sbjct: 121 AGEGNAELFAGLNFIWNNALKFQAFPEIKRIVQKPNPMCSCDGCLDGKETGDVTCCCDFG 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICS+ EVS AND+PPS C QQ AE  E N +YWEVDG APH  L+F+LYYLGV+DL S+
Sbjct: 181 SICSVTEVSSANDDPPSYCEQQVAECQEQNCIYWEVDGGAPHEGLSFALYYLGVQDLCSI 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVCR+LHS VQGDPLLW NIHIDQPLNEKI++DILLQLT+RALGNLQCLSLVEC +ITD
Sbjct: 241 GRVCRSLHSVVQGDPLLWTNIHIDQPLNEKISNDILLQLTNRALGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK VLESNPR+TKLSVPGCTRLSIEG+I++LRAFK+TSTQGVKRLRIGGLYGVTQ+HF
Sbjct: 301 EGLKCVLESNPRLTKLSVPGCTRLSIEGVISSLRAFKLTSTQGVKRLRIGGLYGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           +ELKFLLGSDC+L+Q++S+KPHFY RGNFYVS DDERAIDIE+CPRCEN RLVYDCPAD 
Sbjct: 361 KELKFLLGSDCNLMQESSYKPHFYHRGNFYVSCDDERAIDIEICPRCENPRLVYDCPADG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           C G G +TQACRACTLCI RCVQCGRCV+ENEYVETF LELLCSDCWKPL+KC EK+D R
Sbjct: 421 CPGGGLATQACRACTLCIPRCVQCGRCVNENEYVETFTLELLCSDCWKPLLKCREKQDCR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
           DQSAP    EQ DG +LHG
Sbjct: 481 DQSAPV---EQEDGFFLHG 492

[Close]

BLAST of Sed0022572 vs. ExPASy TrEMBL
Match: A0A6J1HDM9 (F-box protein SKIP14 OS=Cucurbita moschata OX=3662 GN=LOC111462561 PE=4 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 5.9e-219
Identity = 363/481 (75.47%), Postives = 413/481 (85.86%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFSRRPIFPLHL+E+N+VSPMR+ +GY+VEGIPENN E     WH  RE  VD CFD
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
              DI SD+ QDPV+ DILD+LPADPFGMDISTTFTA+TGWLEDMEVDYAEC  V D GG
Sbjct: 61  HRNDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAEC--VRDGGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
            GE N+ELFAGLNF WNNA+KFQ FPEI GIVQKP+PMC C          +V+C CDF 
Sbjct: 121 TGERNVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDEKETGDVSCSCDFR 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICSMDEVSFA+D+PPSCCGQQAAE  E + +Y EVDG APHA L+F+L YLGVRDLLSV
Sbjct: 181 SICSMDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSV 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVC +LHS VQGDPLLWRNIHI+QPLNEKITDDILLQL++RA GNLQCLSLVEC +ITD
Sbjct: 241 GRVCNSLHSVVQGDPLLWRNIHIEQPLNEKITDDILLQLSNRARGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           EGLK+VLESNPR+TKLSVPGCTRLSIEG++++LRAFK+TS QGVK LRIGGL+GVTQ+HF
Sbjct: 301 EGLKQVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           EELKFLLGS CSL  QNS+KPHFY RGNFY+S DDERAIDIE CPRC+NLRLVYDCP D 
Sbjct: 361 EELKFLLGSGCSLKPQNSYKPHFYHRGNFYLSCDDERAIDIEKCPRCQNLRLVYDCPVDG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 467
           CQG+ ++ QACRACTLCISRC+QCGRC++ENE+VETF LELLCS CWKP ++C+E+ DWR
Sbjct: 421 CQGKEYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERDWR 477

[Close]

BLAST of Sed0022572 vs. ExPASy TrEMBL
Match: A0A6J1K7K7 (F-box protein SKIP14 OS=Cucurbita maxima OX=3661 GN=LOC111491883 PE=4 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 7.7e-219
Identity = 366/499 (73.35%), Postives = 419/499 (83.97%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFSRRPIFPLHL+E+N+VSPMR+ +GY+VEGIPENN E     WH  RE  VD CFD
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGRE--VDACFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
              DI SD+ QDPV+ DILD+LPADPFGMDISTTFTA+TGWLEDMEVDYAEC  V +RGG
Sbjct: 61  HRNDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAEC--VRNRGG 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMCGC----------NVTCCCDFG 180
            GE N+ELFAGLNF WNNA+KFQ FPEI GIVQKP+PMC C          +++C CDF 
Sbjct: 121 TGERNVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDDKETGDLSCSCDFR 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICSMDEVSFA+D+PPSCCGQQAAE  E + +Y EVDG APHA L+F+L YLGVRDLLSV
Sbjct: 181 SICSMDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSV 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVC++LHS +QGDPLLWRNIHI+Q LNEKITDDILLQL++RA GNLQCLSLVEC +ITD
Sbjct: 241 GRVCKSLHSLIQGDPLLWRNIHIEQSLNEKITDDILLQLSNRARGNLQCLSLVECPRITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           +GLK VLESNPR+TKLSVPGCTRLSIEG++++LRAFK+TS QGVK LRIGGL+GVTQ+HF
Sbjct: 301 KGLKHVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           EELKFLLGS CSL  QNS+KPHFY RGNFYVS DDERAIDIE CPRC+NLRLVYDCP D 
Sbjct: 361 EELKFLLGSGCSLKPQNSYKPHFYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDWR 480
           CQG+ ++ QACRACTLCISRC+QCGRC++ENE+VETF LELLCS CWKP ++C+E+ DWR
Sbjct: 421 CQGKEYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERDWR 480

Query: 481 DQSAPFHFGEQGDGVYLHG 485
                    EQ D  +LHG
Sbjct: 481 ---------EQEDDFFLHG 486

[Close]

BLAST of Sed0022572 vs. ExPASy TrEMBL
Match: A0A6J1BQG6 (F-box protein SKIP14-like OS=Momordica charantia OX=3673 GN=LOC111004693 PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 3.7e-213
Identity = 365/500 (73.00%), Postives = 413/500 (82.60%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAE-----WHCSREVDVDVCFD 60
           MALNFSRRP FPLH +E++LVSPMR+ +GY+VEGI ENN E     WH  RE  VD CFD
Sbjct: 1   MALNFSRRPTFPLHFSEDSLVSPMRIANGYIVEGIHENNTESCGKSWHHGRE--VDDCFD 60

Query: 61  RGKDIGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG 120
            G+D+  D+ QDPV+ DILD+LPADPFGMDISTTFTAITGWLED+EVDYA C  V D G 
Sbjct: 61  HGRDMCPDSSQDPVSKDILDLLPADPFGMDISTTFTAITGWLEDLEVDYAGC--VSDGGD 120

Query: 121 AGEGNIELFAGLNFIWNNAMKFQVFPEINGIVQKPNPMC---GC-------NVTCCCDFG 180
           AGEGNIELFAGLNF WNNA+KFQ FPEI GI Q P+ +C   GC         +CCCDF 
Sbjct: 121 AGEGNIELFAGLNFFWNNALKFQAFPEIKGIGQNPDQICSYDGCLNGKGTEGASCCCDFE 180

Query: 181 SICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNFSLYYLGVRDLLSV 240
           SICSMD VSFAN++PPS  GQQAAE  E N +Y EVDG APHAALNF LYYLGV+DLLSV
Sbjct: 181 SICSMDGVSFANNDPPSFTGQQAAECQEQNCIYPEVDGGAPHAALNFVLYYLGVQDLLSV 240

Query: 241 GRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECSKITD 300
           GRVCR+LHSAV+ DPL+WR+IHIDQPLNEKITDDILL LT+RA G+LQCLSL+EC  ITD
Sbjct: 241 GRVCRSLHSAVREDPLIWRHIHIDQPLNEKITDDILLLLTNRAQGSLQCLSLLECPGITD 300

Query: 301 EGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRLRIGGLYGVTQDHF 360
           +GLKRVLESNPR+TKLSVP CTRLSIEG++++LRAFK+  TQGVK LRIGGLYG+T +HF
Sbjct: 301 DGLKRVLESNPRLTKLSVPRCTRLSIEGVVSSLRAFKLIGTQGVKHLRIGGLYGLTLEHF 360

Query: 361 EELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRCENLRLVYDCPADD 420
           EELKFLLG++ S +QQNS+KPHFY RGNFYVS DD+R IDIE CPRC+NLRLVYDCP + 
Sbjct: 361 EELKFLLGTERSAMQQNSYKPHFYHRGNFYVSCDDDRPIDIEKCPRCQNLRLVYDCPIEG 420

Query: 421 CQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCWKPLVKCEEKEDW- 480
           CQG+ H TQACRACTLCI RCVQCGRC++ENEYVETFCLELLCSDCWKP   C+EK DW 
Sbjct: 421 CQGKEHVTQACRACTLCILRCVQCGRCINENEYVETFCLELLCSDCWKP---CQEKRDWE 480

Query: 481 RDQSAPFHFGEQGDGVYLHG 485
            DQ APF+  EQ DG YLHG
Sbjct: 481 EDQPAPFYLEEQRDGFYLHG 493

[Close]

BLAST of Sed0022572 vs. TAIR 10
Match: AT3G26000.1 (Ribonuclease inhibitor )

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-105
Identity = 223/485 (45.98%), Postives = 293/485 (60.41%), Query Frame = 0


Query: 1   MALNFSRRPIFPLHLTEENLVSPMRVTHGYMVEGIPENNAEWHCSREVDVDVCFDRG-KD 60
           MALNFS RP F  HL+EE    PM + +G            W CS        FD G K+
Sbjct: 1   MALNFSHRP-FSSHLSEE----PMMIANG-----------NW-CS-------SFDNGRKN 60

Query: 61  IGSDNLQDPVTNDILDVLPADPFGMDISTTFTAITGWLEDMEVDYAECVGVGDRGG--AG 120
            G     D  + DILDVLP+DPFGMDI+ TFTAITGWLED+E DY    G   R     G
Sbjct: 61  TGG----DASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIWIG 120

Query: 121 EGN-IELFAGLNFIWNNAMKFQ------------------------VFPEINGIVQKPNP 180
           +GN  +LFAGL+F WNNAM+FQ                         FPE +G       
Sbjct: 121 DGNRQQLFAGLSFFWNNAMQFQSSGYSYGSESLFGGAFDGSLFSTCKFPESSGENNGFGG 180

Query: 181 MCGCNVTCCCDFGSICSMDEVSFANDNPPSCCGQQAAEYPEHNGVYWEVDGEAPHAALNF 240
               + +C   F S  S+DEV  +++N  +  G+        N    E D    H A+ F
Sbjct: 181 ALDGDGSCHGAFISASSVDEV-LSHENARN--GEVVGSSDRCNN--GEEDAYV-HPAIGF 240

Query: 241 SLYYLGVRDLLSVGRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNL 300
            LY+L  +DLLSV  VC++LH+ V  D LLW++IHI +PLNEKIT++ LL LT+RA G +
Sbjct: 241 CLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERAQGTM 300

Query: 301 QCLSLVECSKITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVKRL 360
           QCL +V+C +ITD+ LKRV+  N ++ K+ VPGCTR++I+GI++ LR  K      VK L
Sbjct: 301 QCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGKLQVKHL 360

Query: 361 RIGGLYGVTQDHFEELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSDDDERAIDIEVCPRC 420
           ++ GL+GVT+DH++EL  LL  D + V+Q   KP FY RG   VS DD+RA+DIE+CP+C
Sbjct: 361 QLRGLFGVTKDHYDELIDLLNID-NKVKQTIQKPRFYHRGEACVSCDDDRALDIEMCPKC 420

Query: 421 ENLRLVYDCPADDCQGQGHSTQACRACTLCISRCVQCGRCVDENEYVETFCLELLCSDCW 458
           +N +LVYDCPA+DC+G+   ++ CRAC+LCI RC  CGRC+ + EY E FCLELLC+ C 
Sbjct: 421 QNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEEMFCLELLCAVCS 450

[Close]

BLAST of Sed0022572 vs. TAIR 10
Match: AT3G27290.1 (RNI-like superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 5.9e-54
Identity = 115/255 (45.10%), Postives = 156/255 (61.18%), Query Frame = 0


Query: 203 GEAPHAALNFSLYYLGVRDLLSVGRVCRTLHSAVQGDPLLWRNIHI-DQPLNEKITDDIL 262
           GEA H A    L YL ++++L+V  VCR+L  +V  +P  W +I + D  L  ++TD+ L
Sbjct: 125 GEA-HDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESL 184

Query: 263 LQLTDRALGNLQCLSLVECSKITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAF 322
           L+LT RALG ++CL+L  C  ITD GLK+VL SNP +TKLSV GC RLS  G+++ LR  
Sbjct: 185 LKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDL 244

Query: 323 KMTSTQGVKRLRIGGLYGVTQDHFEELKFLLGSDCSLVQQNSHKPHFYQ--RGNFYVSDD 382
           K ++  GVK L  GG    T++ F+EL  LLG D  +  Q   K  FY   R  FY+ DD
Sbjct: 245 KSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQ-ERKKRFYTSCRSEFYLEDD 304

Query: 383 DERAIDIEVCPRCENLRLVYDCPADDCQGQG---HSTQACRACTLCISRCVQCGRCVDEN 442
             R  D+E+CP CE   LV+DCPAD C  +G   +S  +CRAC +CI RC +CG C+++ 
Sbjct: 305 --RVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDC 364

Query: 443 EYVETFCLELLCSDC 452
           E  + FC    C  C
Sbjct: 365 EN-KPFCFAFSCVVC 374

[Close]

BLAST of Sed0022572 vs. TAIR 10
Match: AT2G01620.1 (RNI-like superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.7e-37
Identity = 87/264 (32.95%), Postives = 140/264 (53.03%), Query Frame = 0


Query: 200 EVDGEAPHAALNFSLYYL-GVRDLLSVGRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITD 259
           E +  + H  L   L YL  + +LLS+ RV R+L  A++ +  LW  + I+ PL+ ++TD
Sbjct: 10  EEEWRSVHEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTD 69

Query: 260 DILLQLTDRALGNLQCLSLVECSKITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNL 319
           DIL + + ++ G L+ L L +C  +T++GL+RV+++NP ITK+ VPGC+ L+ EGI+  +
Sbjct: 70  DILSEFSSKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECV 129

Query: 320 RAFKMTSTQGVKRLRIGGLYGVTQDHFEELKFLLGSDCSLVQQNSHKPHFYQRGNFYVSD 379
            +    + + ++ L I G+ G T+ H   L   L S                        
Sbjct: 130 ESLSKNNHK-LETLHINGVNGFTKQHLSALYTYLSS------------------------ 189

Query: 380 DDERAIDIEVCPRCENLRLVYDCPADDCQGQGHSTQACRACTLCISRCVQCGRCV--DEN 439
             E  ID+EVCP+C+ +R++  C  + C       + CR C LCI RC +C  C+   + 
Sbjct: 190 --EGTIDLEVCPKCDEVRMIPSCSRESC---NQKQRKCRGCWLCIPRCAECAVCLVGSDT 243

Query: 440 EYVETFC--LELLCSDCWKPLVKC 459
           E  E  C   ++LC +CW  L KC
Sbjct: 250 ESQEAACGNDDVLCLECWLVLPKC 243

[Close]

BLAST of Sed0022572 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-06
Identity = 35/109 (32.11%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 222 LLSVGRVCRTLHSAVQGDPLLWRNIHIDQPLNEKITDDILLQLTDRALGNLQCLSLVECS 281
           L S+GR C +L     G   LW N+         ITD+ LL++ +     L+ L L  CS
Sbjct: 169 LRSIGRSCPSL-----GSLSLW-NV-------STITDNGLLEIAE-GCAQLEKLELNRCS 228

Query: 282 KITDEGLKRVLESNPRITKLSVPGCTRLSIEGIINNLRAFKMTSTQGVK 331
            ITD+GL  + +S P +T+L++  C+R+  EG++   R+     +  +K
Sbjct: 229 TITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIK 263

The following BLAST results are available for this feature:

BLAST of Sed0022572 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585201.1	5.2e-230	77.76	F-box protein SKIP14, partial [Cucurbita argyrosperma subsp. sororia] >KAG702011...	[more]
XP_022951163.1	1.2e-229	77.56	F-box protein SKIP14-like [Cucurbita moschata]	[more]
XP_023537250.1	2.6e-229	77.56	F-box protein SKIP14-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001987.1	8.4e-228	77.56	F-box protein SKIP14-like [Cucurbita maxima]	[more]
XP_023546191.1	6.9e-222	74.55	F-box protein SKIP14 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0022572 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU91	2.7e-104	45.98	F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1	[more]
Q9LK24	8.3e-53	45.10	F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1	[more]
Q9ZU90	2.4e-36	32.95	F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1	[more]
Q9SKK0	2.9e-05	32.11	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]

BLAST of Sed0022572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGY1	5.7e-230	77.56	F-box protein SKIP14-like OS=Cucurbita moschata OX=3662 GN=LOC111454091 PE=4 SV=...	[more]
A0A6J1KI68	4.1e-228	77.56	F-box protein SKIP14-like OS=Cucurbita maxima OX=3661 GN=LOC111496006 PE=4 SV=1	[more]
A0A6J1HDM9	5.9e-219	75.47	F-box protein SKIP14 OS=Cucurbita moschata OX=3662 GN=LOC111462561 PE=4 SV=1	[more]
A0A6J1K7K7	7.7e-219	73.35	F-box protein SKIP14 OS=Cucurbita maxima OX=3661 GN=LOC111491883 PE=4 SV=1	[more]
A0A6J1BQG6	3.7e-213	73.00	F-box protein SKIP14-like OS=Momordica charantia OX=3673 GN=LOC111004693 PE=4 SV...	[more]

BLAST of Sed0022572 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26000.1	1.9e-105	45.98	Ribonuclease inhibitor	[more]
AT3G27290.1	5.9e-54	45.10	RNI-like superfamily protein	[more]
AT2G01620.1	1.7e-37	32.95	RNI-like superfamily protein	[more]
AT2G25490.1	2.1e-06	32.11	EIN3-binding F box protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 216..248 e-value: 5.6E-6 score: 26.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 217..444 e-value: 3.1E-9 score: 38.2
None	No IPR available	PANTHER	PTHR13382:SF22	F-BOX PROTEIN SKIP14	coord: 1..463
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 1..463
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 254..400
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 214..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022572.1	Sed0022572.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding