Sed0022533 (gene) Chayote v1

Overview


Name	Sed0022533
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DUF4228 domain-containing protein
Location	LG10: 1338355 .. 1339171 (+)
RNA-Seq Expression	Sed0022533
Synteny	Sed0022533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAAACAACCATTAGCTTTCACTTTCATTTTTCAAATTCTATTATTTCAATTCTCTCTCTCTCTCTCTTTATGAGAAACCACAACCCAAAGAGAAACACAAATCGGCGCTCATGTTGAACGCAATCAGATGCTGCATCTCCTGCATACTCCCATGTGGATCTCTCGACGTGATCAGGATCGTCCATTGCAACGGCCACGTGGAGGAAATCGCCGGCACCATCCTCGCCAGTGACGTCATGAAGGCCCATCCCAAACACGTCCTCAAGAAACCCTCCTCCGCCTCCGACGACGGCCTCGTCCCCAAGATCGTGATCGTGCCGCCGGACGCCCAGCTCAAACGCGGCAACATTTACTTTCTCATGCCGGTGCCGCCGCCGCCCCGGTCCAACAACAAGAAGAGGAACAGGGAATTGCCGGTCACCGGTTCGGGTTCGGATCGGTACTTGAGTGAAATCCTTTCGGATCAGAAATTGTCCACGGGTCAGAAGGATAAGCGGCGCGGTCGGGTCGGAGTTTGGAGGCCTCATTTGGAGAGCATTTCGGAGTTCCCAACTGATCTTAATTAAATTTTTAATGCAAATTATAAAAATCCAGCTTGTAGGGCTTTTTTCTTTTTTCCTAAATTGATTCATTTCCCTTTTTTCTATATGAATCTCTCCCTTATATATATATATGTGTGTATAAATGAAGTTAAAGGGAAATTATATAATTTTGCTCCCTTCATTATAAAGTGAAGATCATTTTGGTATGTCAAATGGAAATTATGTGCTTTTGTGTTGATACCGATTTTTTTAATCGAACTTGTGATCATGG

mRNA sequence

AAAACAAACAACCATTAGCTTTCACTTTCATTTTTCAAATTCTATTATTTCAATTCTCTCTCTCTCTCTCTTTATGAGAAACCACAACCCAAAGAGAAACACAAATCGGCGCTCATGTTGAACGCAATCAGATGCTGCATCTCCTGCATACTCCCATGTGGATCTCTCGACGTGATCAGGATCGTCCATTGCAACGGCCACGTGGAGGAAATCGCCGGCACCATCCTCGCCAGTGACGTCATGAAGGCCCATCCCAAACACGTCCTCAAGAAACCCTCCTCCGCCTCCGACGACGGCCTCGTCCCCAAGATCGTGATCGTGCCGCCGGACGCCCAGCTCAAACGCGGCAACATTTACTTTCTCATGCCGGTGCCGCCGCCGCCCCGGTCCAACAACAAGAAGAGGAACAGGGAATTGCCGGTCACCGGTTCGGGTTCGGATCGGTACTTGAGTGAAATCCTTTCGGATCAGAAATTGTCCACGGGTCAGAAGGATAAGCGGCGCGGTCGGGTCGGAGTTTGGAGGCCTCATTTGGAGAGCATTTCGGAGTTCCCAACTGATCTTAATTAAATTTTTAATGCAAATTATAAAAATCCAGCTTGTAGGGCTTTTTTCTTTTTTCCTAAATTGATTCATTTCCCTTTTTTCTATATGAATCTCTCCCTTATATATATATATGTGTGTATAAATGAAGTTAAAGGGAAATTATATAATTTTGCTCCCTTCATTATAAAGTGAAGATCATTTTGGTATGTCAAATGGAAATTATGTGCTTTTGTGTTGATACCGATTTTTTTAATCGAACTTGTGATCATGG

Coding sequence (CDS)

ATGTTGAACGCAATCAGATGCTGCATCTCCTGCATACTCCCATGTGGATCTCTCGACGTGATCAGGATCGTCCATTGCAACGGCCACGTGGAGGAAATCGCCGGCACCATCCTCGCCAGTGACGTCATGAAGGCCCATCCCAAACACGTCCTCAAGAAACCCTCCTCCGCCTCCGACGACGGCCTCGTCCCCAAGATCGTGATCGTGCCGCCGGACGCCCAGCTCAAACGCGGCAACATTTACTTTCTCATGCCGGTGCCGCCGCCGCCCCGGTCCAACAACAAGAAGAGGAACAGGGAATTGCCGGTCACCGGTTCGGGTTCGGATCGGTACTTGAGTGAAATCCTTTCGGATCAGAAATTGTCCACGGGTCAGAAGGATAAGCGGCGCGGTCGGGTCGGAGTTTGGAGGCCTCATTTGGAGAGCATTTCGGAGTTCCCAACTGATCTTAATTAA

Protein sequence

MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDDGLVPKIVIVPPDAQLKRGNIYFLMPVPPPPRSNNKKRNRELPVTGSGSDRYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDLN

Homology

[Close]

BLAST of Sed0022533 vs. NCBI nr
Match: KAG6581359.1 (hypothetical protein SDJN03_21361, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034645.1 hypothetical protein SDJN02_04375, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M NAIRCCISCI PCGSLDVIRIVHCNGHVEEIAG+I ASD+MKA+PKHVLKKPSS SD 
Sbjct: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPP-PPRSNNKKRNRELPVT--GSG--------SD 120
           G+VPKIVI+PPDA+L+RG IYFLMP+PP P ++ +KK+ RE P T  GSG        SD
Sbjct: 61  GVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKREAPGTHVGSGISVTNLVVSD 120

Query: 121 RYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
           RYLS+ILS +KLSTGQKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 121 RYLSDILS-EKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 160

[Close]

BLAST of Sed0022533 vs. NCBI nr
Match: XP_022925910.1 (uncharacterized protein LOC111433184 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M NAIRCCISCI PCGSLDVIRIVHCNGHVEEIAG+I ASD+MKA+PKHVLKKPSS SD 
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 101

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPP-PPRSNNKKRNRELPVT--GSG--------SD 120
           G+VPKIVI+PPDA+L+RG IYFLMP+PP P ++ +KK+ RE P T  GSG        SD
Sbjct: 102 GVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKREAPGTDVGSGISVTNLVVSD 161

Query: 121 RYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
           RYLS+ILS +KLSTGQKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 162 RYLSDILS-EKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 201

[Close]

BLAST of Sed0022533 vs. NCBI nr
Match: XP_022978779.1 (uncharacterized protein LOC111478638 [Cucurbita maxima])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M NAIRCCISCI PCGSLDVIRIVHCNGHVEEIAG+I ASD+MKA+PKHVLKKPSS SD 
Sbjct: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPP-PPRSNNKKRNRELPVT--GSG--------SD 120
           G+VPKIVI+PPDA+L+RG IYFLMP+PP P ++ +KK+ RE P T  GSG        SD
Sbjct: 61  GVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKREAPGTDVGSGISVTNLVVSD 120

Query: 121 RYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
           RYLS+ILS +KLSTGQKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 121 RYLSDILS-EKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 160

[Close]

BLAST of Sed0022533 vs. NCBI nr
Match: XP_023543275.1 (uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543276.1 uncharacterized protein LOC111803203 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 9.8e-58
Identity = 122/162 (75.31%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M NAIRCCISCI PCGSLDVIRIVHCNGHVEEIAG+I ASD+MKA+PKHVLKKP+S SD 
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPTSPSDQ 101

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPPPPRS--NNKKRNRELPVT--GSG--------S 120
           G+VPKIVI+PPDA+L+RG IYFLMP+PP P    + KK+ RE P T  GSG        S
Sbjct: 102 GVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKKRETPGTDVGSGISVTNLVVS 161

Query: 121 DRYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
           DRYLS+ILS +KLSTGQKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 162 DRYLSDILS-EKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 202

[Close]

BLAST of Sed0022533 vs. NCBI nr
Match: XP_038882770.1 (uncharacterized protein LOC120073923 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 9.8e-58
Identity = 125/167 (74.85%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSS-ASD 60
           M N IRCCISCILPCGSLDVIRIVHCNGHVEEIAGTI ASDVMKA+PKHVLKKPSS  SD
Sbjct: 1   MKNTIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DGLVPKIVIVPPDAQLKRGNIYFLMPVPPPPRS------NNKKRNRELPVTGSG------ 120
           D +VPKIVI+PPDAQL+RG IYFLMP+PP P          KK+ +ELP TG G      
Sbjct: 61  DRVVPKIVILPPDAQLQRGKIYFLMPLPPAPEKPRSKSLTTKKKKKELPGTGVGSGISVT 120

Query: 121 ----SDRYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
               SDRYLSEILS +KL+T QKDKRRGRVGVWRPHLESISEFPTDL
Sbjct: 121 NLVVSDRYLSEILS-EKLTTAQKDKRRGRVGVWRPHLESISEFPTDL 166

[Close]

BLAST of Sed0022533 vs. ExPASy TrEMBL
Match: A0A6J1IUZ9 (uncharacterized protein LOC111478638 OS=Cucurbita maxima OX=3661 GN=LOC111478638 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M NAIRCCISCI PCGSLDVIRIVHCNGHVEEIAG+I ASD+MKA+PKHVLKKPSS SD 
Sbjct: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 60

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPP-PPRSNNKKRNRELPVT--GSG--------SD 120
           G+VPKIVI+PPDA+L+RG IYFLMP+PP P ++ +KK+ RE P T  GSG        SD
Sbjct: 61  GVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKREAPGTDVGSGISVTNLVVSD 120

Query: 121 RYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
           RYLS+ILS +KLSTGQKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 121 RYLSDILS-EKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 160

[Close]

BLAST of Sed0022533 vs. ExPASy TrEMBL
Match: A0A6J1EJJ7 (uncharacterized protein LOC111433184 OS=Cucurbita moschata OX=3662 GN=LOC111433184 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M NAIRCCISCI PCGSLDVIRIVHCNGHVEEIAG+I ASD+MKA+PKHVLKKPSS SD 
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSPSDH 101

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPP-PPRSNNKKRNRELPVT--GSG--------SD 120
           G+VPKIVI+PPDA+L+RG IYFLMP+PP P ++ +KK+ RE P T  GSG        SD
Sbjct: 102 GVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSKKKKREAPGTDVGSGISVTNLVVSD 161

Query: 121 RYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
           RYLS+ILS +KLSTGQKDKRRGRVGVWRPHLESISEFP DL
Sbjct: 162 RYLSDILS-EKLSTGQKDKRRGRVGVWRPHLESISEFPPDL 201

[Close]

BLAST of Sed0022533 vs. ExPASy TrEMBL
Match: A0A0A0KI99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 121/168 (72.02%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSS-ASD 60
           M NAIRCC+SCILPCGSLDVIRIVHC+GHV+EIAG+I ASDVMKA+PKHVLKKPSS  SD
Sbjct: 1   MKNAIRCCLSCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DGLVPKIVIVPPDAQLKRGNIYFLMPVPPPP-----RSNNKKRNRELPVTGSG------- 120
           D +VPKIVI+PPDA+L+RG IYFLMP+PP P     +S +KK+ +ELP+ G+G       
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLSKKKKKELPLPGTGVGSGISV 120

Query: 121 -----SDRYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
                SDRYLSEILS +KL+T QKDKRRGRVGVWRPHLESISEFPTDL
Sbjct: 121 TNLVVSDRYLSEILS-EKLTTVQKDKRRGRVGVWRPHLESISEFPTDL 167

[Close]

BLAST of Sed0022533 vs. ExPASy TrEMBL
Match: A0A5D3CP55 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008230 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.6e-56
Identity = 121/168 (72.02%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSS-ASD 60
           M NAIRCCISCILPCGSLDVIRIVHC+GHV+EIAG+I ASDVMKA+PKHVLKKPSS  SD
Sbjct: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DGLVPKIVIVPPDAQLKRGNIYFLMPVPPPP-----RSNNKKRNRELPVTGSG------- 120
           D +VPKIVI+PPDA+L+RG IYFLMP+PP P     +S  KK+ +ELP+ G+G       
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSISV 120

Query: 121 -----SDRYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTDL 151
                SD+YLSEILS +KL+T QKDKRRGRVGVWRPHLESISEFPTDL
Sbjct: 121 TNLVVSDQYLSEILS-EKLTTVQKDKRRGRVGVWRPHLESISEFPTDL 167

[Close]

BLAST of Sed0022533 vs. ExPASy TrEMBL
Match: A0A6P3Z812 (uncharacterized protein LOC107410851 OS=Ziziphus jujuba OX=326968 GN=LOC107410974 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.9e-52
Identity = 117/171 (68.42%), Postives = 130/171 (76.02%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSA-SD 60
           M N IRCCISCILPCG+LDVIRIVH NG VEEI+GTI AS++MKAHPKHVLKKPSS  SD
Sbjct: 1   MKNTIRCCISCILPCGALDVIRIVHSNGRVEEISGTIRASEIMKAHPKHVLKKPSSPNSD 60

Query: 61  DGLVPKIVIVPPDAQLKRGNIYFLMPVPPPPR--------SNNKKRNRELPVTGSG---- 120
           DG+VPKIVIVPPDA+L+RG IYFLMP PPPP         S  KKR   + +TG+     
Sbjct: 61  DGVVPKIVIVPPDAELQRGKIYFLMPAPPPPTTEKTRQRPSTKKKRRSSVEMTGNNTGNS 120

Query: 121 ---------SDRYLSEILSDQKLSTGQKDKRRGRVGVWRPHLESISEFPTD 150
                    SDRYLSEILS +K+ST QKD+RRGRVGVWRPHLESISE PTD
Sbjct: 121 TISMTNLLISDRYLSEILS-EKIST-QKDRRRGRVGVWRPHLESISESPTD 169

[Close]

BLAST of Sed0022533 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 165.2 bits (417), Expect = 4.0e-41
Identity = 99/194 (51.03%), Postives = 121/194 (62.37%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M   IRCCI+CILPCG+LDVIRIVH NGHVEEI+GTI AS++MKAHPKHVLKKPSS + D
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  G------LVPKIVIVPPDAQLKRGNIYFLMPVPP---------------------PPRSN 120
                     KIVIVPP+A+L+RG IYFLMP                          RS 
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

Query: 121 NKKRNRELPVTGSG------------------SDRYLSEILSDQKLSTGQKDKRRGRVGV 150
            ++++R+     +G                  SDRYL+EILS +K++T QKD+R+GRVGV
Sbjct: 121 YRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILS-EKVAT-QKDRRKGRVGV 180

[Close]

BLAST of Sed0022533 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 73/183 (39.89%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M N++RCC++C+LPCG+LD+IRIVH NGHV+EI   + A ++++A+P HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCS---Q 60

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPPPPRSNNKKRNREL----PVTGSGSD------- 120
           G+V KI+I+ P+++LKRG+IYFL+P    P     K+ +EL        SG+D       
Sbjct: 61  GVVRKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKKPLESGNDINSDHVS 120

Query: 121 --------------RYLSEILSDQKLSTGQKDKRRGR-------VGVWRPHLESISEFPT 152
                         +YL +++  +K+S+  K+ R  R       V  WRPHL+SI+E   
Sbjct: 121 TNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDSITE--- 177

[Close]

BLAST of Sed0022533 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 73/177 (41.24%), Postives = 107/177 (60.45%), Query Frame = 0


Query: 1   MLNAIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTILASDVMKAHPKHVLKKPSSASDD 60
           M N++RCC++C+LPCG+LD+IRIVH NG+VEEI  +I A ++++A+P HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCS---Q 60

Query: 61  GLVPKIVIVPPDAQLKRGNIYFLMPVPPPPRSN-------NKKRNRELPVTGSGS----- 120
           G+V KI+I+ P+++LKRG+IYFL+P    P           +K+N + P   +       
Sbjct: 61  GVVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNPSADAAGREIKG 120

Query: 121 --------DRYLSEILSDQKLSTGQKDKRRGR------VGVWRPHLESISEFPTDLN 152
                   ++YL E++S    STG++ + R R      V  WRP L+SISE   DLN
Sbjct: 121 DEECVKLCEKYLEEVVS--SASTGKEHRHRRRHSRSASVSTWRPLLDSISE---DLN 169

The following BLAST results are available for this feature:

BLAST of Sed0022533 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581359.1	2.0e-58	76.40	hypothetical protein SDJN03_21361, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022925910.1	2.0e-58	76.40	uncharacterized protein LOC111433184 [Cucurbita moschata]	[more]
XP_022978779.1	2.0e-58	76.40	uncharacterized protein LOC111478638 [Cucurbita maxima]	[more]
XP_023543275.1	9.8e-58	75.31	uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_038882770.1	9.8e-58	74.85	uncharacterized protein LOC120073923 [Benincasa hispida]	[more]

BLAST of Sed0022533 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUZ9	9.5e-59	76.40	uncharacterized protein LOC111478638 OS=Cucurbita maxima OX=3661 GN=LOC111478638...	[more]
A0A6J1EJJ7	9.5e-59	76.40	uncharacterized protein LOC111433184 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A0A0KI99	1.2e-56	72.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1	[more]
A0A5D3CP55	2.6e-56	72.02	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6P3Z812	3.9e-52	68.42	uncharacterized protein LOC107410851 OS=Ziziphus jujuba OX=326968 GN=LOC10741097...	[more]

BLAST of Sed0022533 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29195.1	4.0e-41	51.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30230.1	1.8e-30	39.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06980.1	3.0e-28	41.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 9..145 e-value: 1.9E-28 score: 100.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..133
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 107..146 coord: 1..96
None	No IPR available	PANTHER	PTHR33052:SF3	OS01G0758500 PROTEIN	coord: 107..146 coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022533.1	Sed0022533.1	mRNA