Sed0022532 (gene) Chayote v1

Overview


Name	Sed0022532
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-H2 finger protein ATL46-like
Location	LG01: 12138520 .. 12139530 (-)
RNA-Seq Expression	Sed0022532
Synteny	Sed0022532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGATTTTCAAATGAAATGAAGCAAAAAGATGGTAATCTAATAAACCCATCTCCTCTTTCACCTTTTAATGGTGGCACTGATTCAACATCAAATGATTCCACACCATCATCATCATCTTCTTTCAGCAGCATTAGCCCAACCCTTCTTCTAGCTATAATAATTCTAGCAATCATCTTCTTCATCTCTGGTTTGCTCCATTTGCTGGTTCGATTTCTGCTAAAAAGACCATCCCCTCCAATCCACCGCCACTCCAATCAATACCCAGAAAGGACTGGATCTCACACACTCCAGAGACAGCTCCAGCAGCTCTTCCGCCTTCACGATTCCGGCCTCGACCAATCCTTCATCGACACATTGCCAGTGTTCTTATACAAAGACATTATGGGGTTGAAAGAGCCCTTCGATTGCGCCGTTTGCCTCTATGAATTTTCCAATCAGGACAGGCTGAGATTGCTCCCAATCTGCAGCCATGCTTTTCATATCAAATGCATAGACACATGGCTGCTCTCAAACTCCACTTGCCCTCTCTGCAGAGCCCCCCAAAATTTTCCTCTCGAAAACCCTAATTTCATTTTAGGGCAAGGAAACGGATCTTACAGATACGCAGAAAACACCATTTCTAGAAATCATCATAAACAAGAAACAACAATCGATGAATATACAGGGGAAATGAGAGTATTATCAGTGAGACTGGGCAAATTCAAGAAACTAAACAGCGAAGAAGAACACACAGAAGAGAAAGGGGAAAGCAGCAACAGCAGCCAAAATAAGCTAAATGCGAGAAGATGTTACTCAATGGGAACTTACCAATACGTTGTTGGAGATTCAGATTTAGAGGTGATGAAGGAGAAATCAAACCCTGCAAATGTTGAAGGAAAGAAGATCAGTGGGAGAAGTAAAGGGGAAAGTTACTCGGTGTCGAAGATTTGGCAATGGTCCAAGAAGAGTGGAGGATTGCCGATTCCGAGCAGCTCCAACAATCAATGGAGGCCGGAATTCGTCTGA

mRNA sequence

ATGTCAAGATTTTCAAATGAAATGAAGCAAAAAGATGGTAATCTAATAAACCCATCTCCTCTTTCACCTTTTAATGGTGGCACTGATTCAACATCAAATGATTCCACACCATCATCATCATCTTCTTTCAGCAGCATTAGCCCAACCCTTCTTCTAGCTATAATAATTCTAGCAATCATCTTCTTCATCTCTGGTTTGCTCCATTTGCTGGTTCGATTTCTGCTAAAAAGACCATCCCCTCCAATCCACCGCCACTCCAATCAATACCCAGAAAGGACTGGATCTCACACACTCCAGAGACAGCTCCAGCAGCTCTTCCGCCTTCACGATTCCGGCCTCGACCAATCCTTCATCGACACATTGCCAGTGTTCTTATACAAAGACATTATGGGGTTGAAAGAGCCCTTCGATTGCGCCGTTTGCCTCTATGAATTTTCCAATCAGGACAGGCTGAGATTGCTCCCAATCTGCAGCCATGCTTTTCATATCAAATGCATAGACACATGGCTGCTCTCAAACTCCACTTGCCCTCTCTGCAGAGCCCCCCAAAATTTTCCTCTCGAAAACCCTAATTTCATTTTAGGGCAAGGAAACGGATCTTACAGATACGCAGAAAACACCATTTCTAGAAATCATCATAAACAAGAAACAACAATCGATGAATATACAGGGGAAATGAGAGTATTATCAGTGAGACTGGGCAAATTCAAGAAACTAAACAGCGAAGAAGAACACACAGAAGAGAAAGGGGAAAGCAGCAACAGCAGCCAAAATAAGCTAAATGCGAGAAGATGTTACTCAATGGGAACTTACCAATACGTTGTTGGAGATTCAGATTTAGAGGTGATGAAGGAGAAATCAAACCCTGCAAATGTTGAAGGAAAGAAGATCAGTGGGAGAAGTAAAGGGGAAAGTTACTCGGTGTCGAAGATTTGGCAATGGTCCAAGAAGAGTGGAGGATTGCCGATTCCGAGCAGCTCCAACAATCAATGGAGGCCGGAATTCGTCTGA

Coding sequence (CDS)

ATGTCAAGATTTTCAAATGAAATGAAGCAAAAAGATGGTAATCTAATAAACCCATCTCCTCTTTCACCTTTTAATGGTGGCACTGATTCAACATCAAATGATTCCACACCATCATCATCATCTTCTTTCAGCAGCATTAGCCCAACCCTTCTTCTAGCTATAATAATTCTAGCAATCATCTTCTTCATCTCTGGTTTGCTCCATTTGCTGGTTCGATTTCTGCTAAAAAGACCATCCCCTCCAATCCACCGCCACTCCAATCAATACCCAGAAAGGACTGGATCTCACACACTCCAGAGACAGCTCCAGCAGCTCTTCCGCCTTCACGATTCCGGCCTCGACCAATCCTTCATCGACACATTGCCAGTGTTCTTATACAAAGACATTATGGGGTTGAAAGAGCCCTTCGATTGCGCCGTTTGCCTCTATGAATTTTCCAATCAGGACAGGCTGAGATTGCTCCCAATCTGCAGCCATGCTTTTCATATCAAATGCATAGACACATGGCTGCTCTCAAACTCCACTTGCCCTCTCTGCAGAGCCCCCCAAAATTTTCCTCTCGAAAACCCTAATTTCATTTTAGGGCAAGGAAACGGATCTTACAGATACGCAGAAAACACCATTTCTAGAAATCATCATAAACAAGAAACAACAATCGATGAATATACAGGGGAAATGAGAGTATTATCAGTGAGACTGGGCAAATTCAAGAAACTAAACAGCGAAGAAGAACACACAGAAGAGAAAGGGGAAAGCAGCAACAGCAGCCAAAATAAGCTAAATGCGAGAAGATGTTACTCAATGGGAACTTACCAATACGTTGTTGGAGATTCAGATTTAGAGGTGATGAAGGAGAAATCAAACCCTGCAAATGTTGAAGGAAAGAAGATCAGTGGGAGAAGTAAAGGGGAAAGTTACTCGGTGTCGAAGATTTGGCAATGGTCCAAGAAGAGTGGAGGATTGCCGATTCCGAGCAGCTCCAACAATCAATGGAGGCCGGAATTCGTCTGA

Protein sequence

MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLCRAPQNFPLENPNFILGQGNGSYRYAENTISRNHHKQETTIDEYTGEMRVLSVRLGKFKKLNSEEEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEVMKEKSNPANVEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV

Homology

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BLAST of Sed0022532 vs. NCBI nr
Match: XP_038895238.1 (RING-H2 finger protein ATL46-like [Benincasa hispida])

HSP 1 Score: 503.4 bits (1295), Expect = 1.5e-138
Identity = 276/354 (77.97%), Postives = 299/354 (84.46%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDST---PSSSSSFSSISPTLLLAIIIL 60
           M+RFSNEMKQKDG L  PSPLSPF+G TD  SNDST    SSSSSFSSISP LLL I+IL
Sbjct: 1   MTRFSNEMKQKDGYLTYPSPLSPFDGSTDPKSNDSTLSSSSSSSSFSSISPILLLVIVIL 60

Query: 61  AIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSF 120
           A+IFFISGLLHLLVRFLLKR SP I++ SN+YPER GSHTLQRQLQQLFRLHDSGLDQ+F
Sbjct: 61  AVIFFISGLLHLLVRFLLKRSSPSIYQ-SNRYPERPGSHTLQRQLQQLFRLHDSGLDQNF 120

Query: 121 IDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCP 180
           ID LPVF YKDIMGLKEPFDCAVCLYEFS+QDRLRLLPICSHAFHI CIDTWLLSNSTCP
Sbjct: 121 IDALPVFFYKDIMGLKEPFDCAVCLYEFSDQDRLRLLPICSHAFHINCIDTWLLSNSTCP 180

Query: 181 LCRAP---QNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQETTIDEYTGEMRVLSVR 240
           LCRA     NFP ENPN   ILGQ +GS+R+ EN  S NH K+ TT++E TGEMRVLSVR
Sbjct: 181 LCRATLLGSNFPSENPNLNEILGQESGSHRHPENPTSGNHQKRVTTMEESTGEMRVLSVR 240

Query: 241 LGKFKKLNSE----EEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEVMKEKSN 300
           LGKFK++NSE    EE  EEKGES  SSQN LNARRCYSMGTYQYVVGDSDL+VMK+K N
Sbjct: 241 LGKFKRINSEEEEDEEEIEEKGES--SSQNNLNARRCYSMGTYQYVVGDSDLQVMKQKLN 300

Query: 301 PAN------VEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV 337
           P N      +EGKKISGRSKGES+SVSKIWQWSKKS GL IPSSSN+QW+PEFV
Sbjct: 301 PENLRGNGDMEGKKISGRSKGESFSVSKIWQWSKKS-GLQIPSSSNSQWKPEFV 350

[Close]

BLAST of Sed0022532 vs. NCBI nr
Match: XP_022994629.1 (RING-H2 finger protein ATL46-like [Cucurbita maxima])

HSP 1 Score: 501.5 bits (1290), Expect = 5.6e-138
Identity = 279/362 (77.07%), Postives = 295/362 (81.49%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTP---------SSSSSFSSISPTLL 60
           MSRFSNEM QKDGNLI PSPLSPF+ GTD  SNDS P         SSSSSFS ISP LL
Sbjct: 10  MSRFSNEMMQKDGNLIYPSPLSPFDVGTDPISNDSVPSSSSSSSSSSSSSSFSRISPILL 69

Query: 61  LAIIILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDS 120
           L I+ILA+IFFISGLLHLLVRFLLKR SP I+ HSN+Y ER GSHTLQRQLQQLFRLHDS
Sbjct: 70  LVIVILAVIFFISGLLHLLVRFLLKRSSPSIYHHSNRYTERPGSHTLQRQLQQLFRLHDS 129

Query: 121 GLDQSFIDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLL 180
           GLDQSFID LPVFLY+DI+ LKEPFDCAVCL EFS  DRLR LPICSHAFHI CIDTWLL
Sbjct: 130 GLDQSFIDALPVFLYRDIVDLKEPFDCAVCLNEFSYHDRLRSLPICSHAFHINCIDTWLL 189

Query: 181 SNSTCPLCRA---PQNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGE 240
           SNSTCPLCRA     NFPLENPN   ILG+GNGS+R  EN +S NH K+  TTIDE + E
Sbjct: 190 SNSTCPLCRASLLSSNFPLENPNLDEILGRGNGSHRQPENPLSGNHQKRVTTTIDESSRE 249

Query: 241 MRVLSVRLGKFKKLNSE-----EEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDL 300
           MRV SVRLGKFKK+NSE     EE TEE+GESSN  QN LNARRCYSMGTYQYVVGDSDL
Sbjct: 250 MRVFSVRLGKFKKINSEEEQEHEEQTEEEGESSN--QNHLNARRCYSMGTYQYVVGDSDL 309

Query: 301 EVMKEKSNPA------NVEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPE 337
           +VMKEK NPA       VEGKKISGRS GES+SVSKIWQWSKKS GLPIPSSSNNQWRPE
Sbjct: 310 QVMKEKLNPAIFQGNGEVEGKKISGRSNGESFSVSKIWQWSKKS-GLPIPSSSNNQWRPE 368

[Close]

BLAST of Sed0022532 vs. NCBI nr
Match: XP_022954939.1 (RING-H2 finger protein ATL46-like [Cucurbita moschata])

HSP 1 Score: 501.1 bits (1289), Expect = 7.3e-138
Identity = 279/359 (77.72%), Postives = 294/359 (81.89%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTP------SSSSSFSSISPTLLLAI 60
           MSRFSNEM QKDGNLI PSPLSPF+ GTDS SNDS P      SSSSSFS ISP LLL I
Sbjct: 1   MSRFSNEMMQKDGNLIYPSPLSPFDVGTDSISNDSVPSSSSSSSSSSSFSRISPILLLVI 60

Query: 61  IILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLD 120
           +ILA+IFF+SGLLHLLVRFLLKR SP I+ HSN+Y ER GSHTLQRQLQQLFRLHDSGLD
Sbjct: 61  VILAVIFFVSGLLHLLVRFLLKRSSPSIYHHSNRYTERPGSHTLQRQLQQLFRLHDSGLD 120

Query: 121 QSFIDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNS 180
           QSFID LPVFLY+DIM LKEPFDCAVCL EFS  DRLR LPICSHAFHI CIDTWLLSNS
Sbjct: 121 QSFIDALPVFLYRDIMDLKEPFDCAVCLNEFSYHDRLRSLPICSHAFHINCIDTWLLSNS 180

Query: 181 TCPLCRA---PQNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGEMRV 240
           TCPLCRA     NFPLENPN   ILG+GNGS+   EN IS NH K+  TTIDE + EMRV
Sbjct: 181 TCPLCRASLLSSNFPLENPNLDEILGRGNGSHWQPENPISGNHQKRVTTTIDESSREMRV 240

Query: 241 LSVRLGKFKKLNSE-----EEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEVM 300
            SVRLGKFKK+NSE     EE  EE+GESSN  QN LNARRCYSMGTYQYVVGDSDL+VM
Sbjct: 241 FSVRLGKFKKINSEEEQEHEEQIEEEGESSN--QNHLNARRCYSMGTYQYVVGDSDLQVM 300

Query: 301 KEKSNPA------NVEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV 337
           KEK NPA       VEGKKISGRS GES+SVSKIWQWSKKS GLPIPSSSNNQWRPEFV
Sbjct: 301 KEKLNPAIFQGNGEVEGKKISGRSNGESFSVSKIWQWSKKS-GLPIPSSSNNQWRPEFV 356

[Close]

BLAST of Sed0022532 vs. NCBI nr
Match: KAG7012235.1 (RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 500.4 bits (1287), Expect = 1.2e-137
Identity = 279/361 (77.29%), Postives = 294/361 (81.44%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTP--------SSSSSFSSISPTLLL 60
           MSRFSNEM QKDGNLI PSPLSPF+ GTDS SNDS P        SSSSSFS ISP LLL
Sbjct: 1   MSRFSNEMMQKDGNLIYPSPLSPFDVGTDSISNDSVPSSSSSSSSSSSSSFSRISPILLL 60

Query: 61  AIIILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSG 120
            I+ILA+IFF+SGLLHLLVRFLLKR SP I+ HSN+Y ER GSHTLQRQLQQLFRLHDSG
Sbjct: 61  VIVILAVIFFVSGLLHLLVRFLLKRSSPSIYHHSNRYTERPGSHTLQRQLQQLFRLHDSG 120

Query: 121 LDQSFIDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLS 180
           LDQSFID LPVFLY+DIM LKEPFDCAVCL EFS  DRLR LPICSHAFHI CIDTWLLS
Sbjct: 121 LDQSFIDALPVFLYRDIMDLKEPFDCAVCLNEFSYHDRLRSLPICSHAFHINCIDTWLLS 180

Query: 181 NSTCPLCRA---PQNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGEM 240
           NSTCPLCRA     NFPLE PN   ILG+GNGS+R  EN IS NH K+  TTIDE + EM
Sbjct: 181 NSTCPLCRASLLSSNFPLEYPNLDEILGRGNGSHRQPENPISGNHQKRVTTTIDESSREM 240

Query: 241 RVLSVRLGKFKKLNSE-----EEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLE 300
           RV SVRLGKFKK+NSE     EE  EE+GESSN  QN LNARRCYSMGTYQYVVGDSDL+
Sbjct: 241 RVFSVRLGKFKKINSEEEQEHEEQIEEEGESSN--QNHLNARRCYSMGTYQYVVGDSDLQ 300

Query: 301 VMKEKSNPA------NVEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEF 337
           VMKEK NPA       VEGKKISGRS GES+SVSKIWQWSKKS GLPIPSSSNNQWRPEF
Sbjct: 301 VMKEKLNPAIFQGNGEVEGKKISGRSNGESFSVSKIWQWSKKS-GLPIPSSSNNQWRPEF 358

[Close]

BLAST of Sed0022532 vs. NCBI nr
Match: XP_023541207.1 (RING-H2 finger protein ATL46-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 497.3 bits (1279), Expect = 1.1e-136
Identity = 277/360 (76.94%), Postives = 292/360 (81.11%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTPSSSS-------SFSSISPTLLLA 60
           MSRFSNEM QKDGNLI PSPLSPF+ GTDS SNDS PSSSS       SFS ISP LLL 
Sbjct: 1   MSRFSNEMMQKDGNLIYPSPLSPFDVGTDSISNDSVPSSSSSSSSSSASFSRISPILLLV 60

Query: 61  IIILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGL 120
           I+ILA+IFF+SGLLHLLVRFLLKR SP I+ HSN+Y ER GSHTLQRQLQQLFRLHDSGL
Sbjct: 61  IVILAVIFFVSGLLHLLVRFLLKRSSPSIYHHSNRYSERPGSHTLQRQLQQLFRLHDSGL 120

Query: 121 DQSFIDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSN 180
           DQSFID LPVFLY+DIM LKEPFDCAVCL EFS  DRLR LPICSHAFHI CIDTWLLSN
Sbjct: 121 DQSFIDALPVFLYRDIMDLKEPFDCAVCLNEFSYHDRLRSLPICSHAFHINCIDTWLLSN 180

Query: 181 STCPLCRA---PQNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGEMR 240
           STCPLCRA     NFPLENPN   ILG+GN S+R  EN I  NH K+  TTIDE + EMR
Sbjct: 181 STCPLCRASLLSSNFPLENPNLDEILGRGNSSHRQPENPIPGNHQKRVTTTIDESSREMR 240

Query: 241 VLSVRLGKFKKLNSE-----EEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEV 300
           V SVRLGKFKK+NSE     EE  EE+GESSN  QN LNARRCYSMGTYQYVVGDSDL+V
Sbjct: 241 VFSVRLGKFKKINSEEEQEHEEQIEEEGESSN--QNHLNARRCYSMGTYQYVVGDSDLQV 300

Query: 301 MKEKSNPA------NVEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV 337
           MKEK  PA       VEGKKISGRS GES+SVSKIWQWSKKS GLPIPSSSNNQWRPEFV
Sbjct: 301 MKEKLKPAIFQGNGEVEGKKISGRSNGESFSVSKIWQWSKKS-GLPIPSSSNNQWRPEFV 357

[Close]

BLAST of Sed0022532 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.2e-72
Identity = 170/360 (47.22%), Postives = 220/360 (61.11%), Query Frame = 0


Query: 8   MKQKDGNLINPSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAIIFFISGLL 67
           ++QKDGN   P P        D   +  +P   SS + ISP +L  I+ILA++FFISGLL
Sbjct: 8   IEQKDGNFAYPPPFY-----KDPILSPPSPPPPSSGNRISPAVLFVIVILAVLFFISGLL 67

Query: 68  HLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYK 127
           HLLVRFL+K PS      SN++PE + S  LQRQLQQLF L+DSGLDQ+FID LPVF YK
Sbjct: 68  HLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYK 127

Query: 128 DIMG----------LKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCP 187
           +I+G           +EPFDCAVCL EFS +D+LRLLP+CSHAFH+ CIDTWL SNSTCP
Sbjct: 128 EIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCP 187

Query: 188 LCRA---PQNFPLENPNFILGQGNGSYRYAENTISRNHHKQETTIDEYTGEMRVLSVRLG 247
           LCR       F +ENP F         R  E  ++ N  ++   I E   E  VL VRLG
Sbjct: 188 LCRGTLFSPGFSMENPMFDF----DDIREDEEGVTENGSQKTMEIQEIVVEKGVLPVRLG 247

Query: 248 KFKKL----NSEEEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEV-------- 307
           KFK+L    N + +     GE+S+S+   L+ARRC+SMG+YQY++G+S+L+V        
Sbjct: 248 KFKRLDNVGNGQGQDVVAGGETSSSN---LDARRCFSMGSYQYILGNSELKVPFANDRLP 307

Query: 308 --------MKEKSNPANVEGKKISGRSKGESYSVSKIWQWSKK-----SGGLPIPSSSNN 330
                    ++  N ++ + KKI+  +KGES+SVSKIW W KK          +PSSS N
Sbjct: 308 RLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFSSDAQRRLPSSSLN 355

[Close]

BLAST of Sed0022532 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.8e-70
Identity = 166/324 (51.23%), Postives = 201/324 (62.04%), Query Frame = 0


Query: 18  PSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAIIFFISGLLHLLVRFLLKR 77
           PSP++  +  TDS+S+    SSS   + ISP +L  I++L++IFFI  +LHLLVR+ LK+
Sbjct: 25  PSPITLNHQLTDSSSS----SSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 84

Query: 78  PSPPIH---RHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYKDIMGLKE 137
               +      SNQ PE + S T QRQLQQLF LHDSGLDQ+ ID LPVFLYK+I G KE
Sbjct: 85  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKE 144

Query: 138 PFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLCRA---PQNFPLENPN 197
           PFDCAVCL EFS  D+LRLLP CSHAFHI CIDTWLLSNSTCPLCR          E P+
Sbjct: 145 PFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPD 204

Query: 198 FILGQGNGSYRYAENTISRNHHKQETTIDEYTGEMRVLSVRLGKFKKLNSEEEHTEEKGE 257
           F  G   G        +S      E  I +     RV SVRLGKF+  N         G 
Sbjct: 205 FNFGFFAGDDGGGGVRVSPVQKPAENEIGK-----RVFSVRLGKFRSSNIVNNGEVVVGG 264

Query: 258 SSNSSQNKLNARRCYSMGTYQYVVGDSDLEVM-----KEKSNPANVEGKKISGRSKGESY 317
              +S + L+ RRC+SMG+YQY+V +SDL V      +   N  +VEGKKI+ RSKGES+
Sbjct: 265 GGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPNNEGLKNNKDVEGKKINMRSKGESF 324

Query: 318 SVSKIWQWSKKSGGLP--IPSSSN 329
           SVSKIWQWS K    P   PS +N
Sbjct: 325 SVSKIWQWSNKRSKFPNNHPSETN 339

[Close]

BLAST of Sed0022532 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-48
Identity = 144/371 (38.81%), Postives = 199/371 (53.64%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAII 60
           M++   EMK    NLI+ SP  P           S  S S+  S I+P +LL IIIL+II
Sbjct: 1   MNKILPEMKSTQ-NLISSSPPPPL------IPLKSNTSLSNLNSKITPNILLIIIILSII 60

Query: 61  FFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDT 120
           FFISGLLH+LV+FLL   +P      + +   T    LQ QLQQLF LHDSG+DQS IDT
Sbjct: 61  FFISGLLHILVKFLL---TPSRESREDYFDNVT---ALQGQLQQLFNLHDSGVDQSLIDT 120

Query: 121 LPVFLYKDIMGLK-EPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLC 180
           LPVF YK I+GLK  PFDC VCL EF  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 121 LPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLC 180

Query: 181 RA------PQNFPLENPNFILGQGNGSYR------------------YAENTISRNHHKQ 240
           R+        +  L +   ++ +   S R                   +E+T  R+  K 
Sbjct: 181 RSNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKS 240

Query: 241 ---ETTIDEYTGEMRVLSVRLGKFKKLNSEEEHTEEKGESSNSSQNKLNARRCYSMGTYQ 300
              +  +D    ++  L V+LGKF+ ++   E +++K  S + +   ++ RRC SMG+Y+
Sbjct: 241 CDPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYE 300

Query: 301 YVVGDSDLEVMKEKSNPANVEGKKISGRSK--------------------------GESY 318
           Y++        +E +   +V  KK+SG+ +                           ES+
Sbjct: 301 YIMD-------QEATLKVHVSTKKLSGKDRVPSHRTVMSECGFDPTVKGIEKSVVERESF 351

[Close]

BLAST of Sed0022532 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 4.7e-47
Identity = 137/314 (43.63%), Postives = 179/314 (57.01%), Query Frame = 0


Query: 39  SSSSF---SSISPTLLLAIIILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGS 98
           SS++F   S ISP++LL IIIL+IIFFISGLLHLLVRFLL     P  R    Y +   +
Sbjct: 37  SSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLL----TPSSRDREDYFDNVTA 96

Query: 99  HTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYKDIMGLKE-PFDCAVCLYEFSNQDRLRLL 158
             LQ QLQQLF LHDSG+DQSFIDTLPVF YK I+GLK  PFDCAVCL EF  +D+LRLL
Sbjct: 97  --LQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLL 156

Query: 159 PICSHAFHIKCIDTWLLSNSTCPLCRAPQNFPLEN-----PNFIL--------------G 218
           P CSHAFH+ CIDTWLLS+STCPLCR+     L +      +F+L              G
Sbjct: 157 PKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGG 216

Query: 219 QGNGSYRYAENT----------ISRNHHKQETTIDEYTGEMRV-------------LSVR 278
             + +   A N           +  N+    T ID   G+  +              SV+
Sbjct: 217 DRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVK 276

Query: 279 LGKFKKLNSEEEHTEEKGESSNS---SQNKLNARRCYSMGTYQYVVGDSDLEVMKEKSNP 304
           LGKF+ ++  E      G SSN+   + + L+ RRC+SMG+Y+Y++ +       E +  
Sbjct: 277 LGKFRNIDIGE------GTSSNNNIGNSSSLDERRCFSMGSYEYIMDE-------ETTLK 331

[Close]

BLAST of Sed0022532 vs. ExPASy Swiss-Prot
Match: Q7X843 (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-41
Identity = 114/264 (43.18%), Postives = 146/264 (55.30%), Query Frame = 0


Query: 25  NGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAIIFFISGLLHLLVRFLLKRPSPPIHR 84
           +  T +  N   PSS    SSI   L L I  LA+I    G+L+L+ +FL K  +     
Sbjct: 99  SAATLTLMNQKDPSS----SSIVSVLCLVISGLALIIVFLGVLYLIFKFLRKSSTLFPIP 158

Query: 85  HSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYKDI-MGLKEPFDCAVCLY 144
           H N  P+     +   QLQ LF LHDSGLDQ+ ID LPVFLY ++ + L++PFDCAVCL 
Sbjct: 159 HFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLN 218

Query: 145 EFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLCRAPQNFPLENPNFILGQGNGSYRY 204
           EFS+ D+LRLLP+CSHAFH+ CIDTWLLSNSTCPLCR             L   N  Y +
Sbjct: 219 EFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRS-----------LSTSNVCYNH 278

Query: 205 AENTISRNHHKQETTIDEYTGEMRVLSVRLGKFKKLNSEEEHTEEKGESSNSSQNKLNAR 264
           +E  ++     Q+    + +   RV SVRLG+FK  N  +    +  +           R
Sbjct: 279 SETLVAPLSGHQQVDDGKASLAKRVFSVRLGRFKSTNESQSQRHDVKDEIGVRM----PR 338

Query: 265 RCYSMGTYQYVVGDSDLEVMKEKS 288
           RCYSMGT QY+V D D  V    S
Sbjct: 339 RCYSMGTQQYLVCDQDFVVALSSS 341

[Close]

BLAST of Sed0022532 vs. ExPASy TrEMBL
Match: A0A6J1K3D8 (RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111490284 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.7e-138
Identity = 279/362 (77.07%), Postives = 295/362 (81.49%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTP---------SSSSSFSSISPTLL 60
           MSRFSNEM QKDGNLI PSPLSPF+ GTD  SNDS P         SSSSSFS ISP LL
Sbjct: 10  MSRFSNEMMQKDGNLIYPSPLSPFDVGTDPISNDSVPSSSSSSSSSSSSSSFSRISPILL 69

Query: 61  LAIIILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDS 120
           L I+ILA+IFFISGLLHLLVRFLLKR SP I+ HSN+Y ER GSHTLQRQLQQLFRLHDS
Sbjct: 70  LVIVILAVIFFISGLLHLLVRFLLKRSSPSIYHHSNRYTERPGSHTLQRQLQQLFRLHDS 129

Query: 121 GLDQSFIDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLL 180
           GLDQSFID LPVFLY+DI+ LKEPFDCAVCL EFS  DRLR LPICSHAFHI CIDTWLL
Sbjct: 130 GLDQSFIDALPVFLYRDIVDLKEPFDCAVCLNEFSYHDRLRSLPICSHAFHINCIDTWLL 189

Query: 181 SNSTCPLCRA---PQNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGE 240
           SNSTCPLCRA     NFPLENPN   ILG+GNGS+R  EN +S NH K+  TTIDE + E
Sbjct: 190 SNSTCPLCRASLLSSNFPLENPNLDEILGRGNGSHRQPENPLSGNHQKRVTTTIDESSRE 249

Query: 241 MRVLSVRLGKFKKLNSE-----EEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDL 300
           MRV SVRLGKFKK+NSE     EE TEE+GESSN  QN LNARRCYSMGTYQYVVGDSDL
Sbjct: 250 MRVFSVRLGKFKKINSEEEQEHEEQTEEEGESSN--QNHLNARRCYSMGTYQYVVGDSDL 309

Query: 301 EVMKEKSNPA------NVEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPE 337
           +VMKEK NPA       VEGKKISGRS GES+SVSKIWQWSKKS GLPIPSSSNNQWRPE
Sbjct: 310 QVMKEKLNPAIFQGNGEVEGKKISGRSNGESFSVSKIWQWSKKS-GLPIPSSSNNQWRPE 368

[Close]

BLAST of Sed0022532 vs. ExPASy TrEMBL
Match: A0A6J1GUG8 (RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111457046 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.5e-138
Identity = 279/359 (77.72%), Postives = 294/359 (81.89%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTP------SSSSSFSSISPTLLLAI 60
           MSRFSNEM QKDGNLI PSPLSPF+ GTDS SNDS P      SSSSSFS ISP LLL I
Sbjct: 1   MSRFSNEMMQKDGNLIYPSPLSPFDVGTDSISNDSVPSSSSSSSSSSSFSRISPILLLVI 60

Query: 61  IILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLD 120
           +ILA+IFF+SGLLHLLVRFLLKR SP I+ HSN+Y ER GSHTLQRQLQQLFRLHDSGLD
Sbjct: 61  VILAVIFFVSGLLHLLVRFLLKRSSPSIYHHSNRYTERPGSHTLQRQLQQLFRLHDSGLD 120

Query: 121 QSFIDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNS 180
           QSFID LPVFLY+DIM LKEPFDCAVCL EFS  DRLR LPICSHAFHI CIDTWLLSNS
Sbjct: 121 QSFIDALPVFLYRDIMDLKEPFDCAVCLNEFSYHDRLRSLPICSHAFHINCIDTWLLSNS 180

Query: 181 TCPLCRA---PQNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGEMRV 240
           TCPLCRA     NFPLENPN   ILG+GNGS+   EN IS NH K+  TTIDE + EMRV
Sbjct: 181 TCPLCRASLLSSNFPLENPNLDEILGRGNGSHWQPENPISGNHQKRVTTTIDESSREMRV 240

Query: 241 LSVRLGKFKKLNSE-----EEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEVM 300
            SVRLGKFKK+NSE     EE  EE+GESSN  QN LNARRCYSMGTYQYVVGDSDL+VM
Sbjct: 241 FSVRLGKFKKINSEEEQEHEEQIEEEGESSN--QNHLNARRCYSMGTYQYVVGDSDLQVM 300

Query: 301 KEKSNPA------NVEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV 337
           KEK NPA       VEGKKISGRS GES+SVSKIWQWSKKS GLPIPSSSNNQWRPEFV
Sbjct: 301 KEKLNPAIFQGNGEVEGKKISGRSNGESFSVSKIWQWSKKS-GLPIPSSSNNQWRPEFV 356

[Close]

BLAST of Sed0022532 vs. ExPASy TrEMBL
Match: A0A6J1C9N2 (RING-H2 finger protein ATL46-like OS=Momordica charantia OX=3673 GN=LOC111008727 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 8.1e-135
Identity = 269/356 (75.56%), Postives = 293/356 (82.30%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAII 60
           MSR SNEMKQKDGNL+ PSPLSPF+GG D  SNDSTPSSSSSFSSISP LLL I+ILA+I
Sbjct: 1   MSRLSNEMKQKDGNLLYPSPLSPFDGGADPISNDSTPSSSSSFSSISPILLLVIVILAVI 60

Query: 61  FFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDT 120
           FF+SGLLHLLVRFLLKR SP I++ SN+YPER GSHTLQRQLQQLFRLHDSGLDQ+FID 
Sbjct: 61  FFVSGLLHLLVRFLLKRSSPAIYQ-SNRYPERPGSHTLQRQLQQLFRLHDSGLDQAFIDA 120

Query: 121 LPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLCR 180
           LPVFLYKDIMGLKEPFDCAVCLYEFS+ DRLRLLPICSHAFHI CIDTWLLSNSTCPLCR
Sbjct: 121 LPVFLYKDIMGLKEPFDCAVCLYEFSDHDRLRLLPICSHAFHINCIDTWLLSNSTCPLCR 180

Query: 181 AP---QNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQETTIDEYTGEMRVLSVRLGK 240
           A     NFPLENPNF  ILGQ NGS R+ EN++S N  ++  T +E  G+M+V SVRLGK
Sbjct: 181 ATLLGSNFPLENPNFNEILGQENGSLRHPENSLSGN--QKRVTTEEPAGKMKVFSVRLGK 240

Query: 241 FKKLNSEE---------EHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEVMKEK 300
           FK+LNSEE         E  EEKGES  SS+N L ARRCYSMGTYQYVVGDSDL+VMKEK
Sbjct: 241 FKRLNSEEQEEEENDDDEGREEKGES--SSKNNLEARRCYSMGTYQYVVGDSDLQVMKEK 300

Query: 301 SNPAN------VEGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV 337
           +NP N      VEGKKISGRSKGES+SVSKIW WSK S G P PSSSN QW+ E V
Sbjct: 301 ANPENFPGNGDVEGKKISGRSKGESFSVSKIWLWSKNS-GFPNPSSSNTQWKRELV 350

[Close]

BLAST of Sed0022532 vs. ExPASy TrEMBL
Match: A0A5A7UNJ9 (RING-H2 finger protein ATL46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00560 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 5.8e-133
Identity = 271/356 (76.12%), Postives = 293/356 (82.30%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTP---SSSSSFSSISPTLLLAIIIL 60
           M RFSNEMKQKDG LI PSP+SPF+G TD  SND TP   SSSSSFSSISP LLL I+IL
Sbjct: 1   MPRFSNEMKQKDGYLIYPSPISPFDGSTDPKSNDPTPSPSSSSSSFSSISPILLLVIVIL 60

Query: 61  AIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSF 120
           A+IFFISGLLHLLVRFLLKR SP I++ SN+YPER GSHTLQRQLQQLFRLHDSGLDQ+F
Sbjct: 61  AVIFFISGLLHLLVRFLLKRSSPSIYQ-SNRYPERPGSHTLQRQLQQLFRLHDSGLDQTF 120

Query: 121 IDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCP 180
           ID LPVFLYKDIMGLKEPFDCAVCLYEFS+QDRLRLLPICSHAFHI CIDTWLLSNSTCP
Sbjct: 121 IDALPVFLYKDIMGLKEPFDCAVCLYEFSDQDRLRLLPICSHAFHISCIDTWLLSNSTCP 180

Query: 181 LCRAP---QNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGEMRVLSV 240
           LCRA     +FP ENPN   ILGQ N   R+ ENT+S NH K+  TT++E  GEMRVLSV
Sbjct: 181 LCRATLLGSSFPSENPNLNEILGQENNYNRHPENTVSGNHQKRVTTTMEESAGEMRVLSV 240

Query: 241 RLGKFKKLNS-----EEEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEVMKEK 300
           RLGKFKKLN+     EEE  EEKGES  SSQ  LNARRCYSMGTYQYVVG+SDL+VMKEK
Sbjct: 241 RLGKFKKLNNEEDDDEEEEIEEKGES--SSQQNLNARRCYSMGTYQYVVGESDLQVMKEK 300

Query: 301 SNPANV------EGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV 337
            N  NV      EGKKISGRSKGES+SVSKIWQWSKKS  LPI SSSN++W+ E V
Sbjct: 301 LNTENVRGNGEMEGKKISGRSKGESFSVSKIWQWSKKS-ELPITSSSNSEWKTEVV 352

[Close]

BLAST of Sed0022532 vs. ExPASy TrEMBL
Match: A0A1S3AWE3 (RING-H2 finger protein ATL46-like OS=Cucumis melo OX=3656 GN=LOC103483362 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.3e-132
Identity = 270/356 (75.84%), Postives = 293/356 (82.30%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTP---SSSSSFSSISPTLLLAIIIL 60
           M RFSNEMKQKDG LI PSP+SPF+G TD  SND TP   SSSSSFSSISP LLL I+IL
Sbjct: 1   MPRFSNEMKQKDGYLIYPSPISPFDGSTDPKSNDPTPSPSSSSSSFSSISPILLLVIVIL 60

Query: 61  AIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSF 120
           A+IFFISGLLHLLVRFLLKR SP I++ SN+YPER GSHTLQRQLQQLFRLHDSGLDQ+F
Sbjct: 61  AVIFFISGLLHLLVRFLLKRSSPSIYQ-SNRYPERPGSHTLQRQLQQLFRLHDSGLDQTF 120

Query: 121 IDTLPVFLYKDIMGLKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCP 180
           ID LPVFLYKDIMGLKEPFDCAVCLYEFS+QDRLRLLPICSHAFHI CIDTWLLSNSTCP
Sbjct: 121 IDALPVFLYKDIMGLKEPFDCAVCLYEFSDQDRLRLLPICSHAFHISCIDTWLLSNSTCP 180

Query: 181 LCRAP---QNFPLENPNF--ILGQGNGSYRYAENTISRNHHKQ-ETTIDEYTGEMRVLSV 240
           LCRA     +FP ENPN   ILGQ N   R+ ENT++ NH K+  TT++E  GEMRVLSV
Sbjct: 181 LCRATLLGSSFPSENPNLNEILGQENNYNRHPENTVAGNHQKRVTTTMEESAGEMRVLSV 240

Query: 241 RLGKFKKLNS-----EEEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEVMKEK 300
           RLGKFKKLN+     EEE  EEKGES  SSQ  LNARRCYSMGTYQYVVG+SDL+VMKEK
Sbjct: 241 RLGKFKKLNNEEDDDEEEEIEEKGES--SSQQNLNARRCYSMGTYQYVVGESDLQVMKEK 300

Query: 301 SNPANV------EGKKISGRSKGESYSVSKIWQWSKKSGGLPIPSSSNNQWRPEFV 337
            N  NV      EGKKISGRSKGES+SVSKIWQWSKKS  LPI SSSN++W+ E V
Sbjct: 301 LNTENVRGNGEMEGKKISGRSKGESFSVSKIWQWSKKS-ELPITSSSNSEWKTEVV 352

[Close]

BLAST of Sed0022532 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 273.1 bits (697), Expect = 3.0e-73
Identity = 170/360 (47.22%), Postives = 220/360 (61.11%), Query Frame = 0


Query: 8   MKQKDGNLINPSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAIIFFISGLL 67
           ++QKDGN   P P        D   +  +P   SS + ISP +L  I+ILA++FFISGLL
Sbjct: 8   IEQKDGNFAYPPPFY-----KDPILSPPSPPPPSSGNRISPAVLFVIVILAVLFFISGLL 67

Query: 68  HLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYK 127
           HLLVRFL+K PS      SN++PE + S  LQRQLQQLF L+DSGLDQ+FID LPVF YK
Sbjct: 68  HLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYK 127

Query: 128 DIMG----------LKEPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCP 187
           +I+G           +EPFDCAVCL EFS +D+LRLLP+CSHAFH+ CIDTWL SNSTCP
Sbjct: 128 EIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCP 187

Query: 188 LCRA---PQNFPLENPNFILGQGNGSYRYAENTISRNHHKQETTIDEYTGEMRVLSVRLG 247
           LCR       F +ENP F         R  E  ++ N  ++   I E   E  VL VRLG
Sbjct: 188 LCRGTLFSPGFSMENPMFDF----DDIREDEEGVTENGSQKTMEIQEIVVEKGVLPVRLG 247

Query: 248 KFKKL----NSEEEHTEEKGESSNSSQNKLNARRCYSMGTYQYVVGDSDLEV-------- 307
           KFK+L    N + +     GE+S+S+   L+ARRC+SMG+YQY++G+S+L+V        
Sbjct: 248 KFKRLDNVGNGQGQDVVAGGETSSSN---LDARRCFSMGSYQYILGNSELKVPFANDRLP 307

Query: 308 --------MKEKSNPANVEGKKISGRSKGESYSVSKIWQWSKK-----SGGLPIPSSSNN 330
                    ++  N ++ + KKI+  +KGES+SVSKIW W KK          +PSSS N
Sbjct: 308 RLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFSSDAQRRLPSSSLN 355

[Close]

BLAST of Sed0022532 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 4.8e-71
Identity = 166/324 (51.23%), Postives = 201/324 (62.04%), Query Frame = 0


Query: 18  PSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAIIFFISGLLHLLVRFLLKR 77
           PSP++  +  TDS+S+    SSS   + ISP +L  I++L++IFFI  +LHLLVR+ LK+
Sbjct: 25  PSPITLNHQLTDSSSS----SSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKK 84

Query: 78  PSPPIH---RHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYKDIMGLKE 137
               +      SNQ PE + S T QRQLQQLF LHDSGLDQ+ ID LPVFLYK+I G KE
Sbjct: 85  KRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKE 144

Query: 138 PFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLCRA---PQNFPLENPN 197
           PFDCAVCL EFS  D+LRLLP CSHAFHI CIDTWLLSNSTCPLCR          E P+
Sbjct: 145 PFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPD 204

Query: 198 FILGQGNGSYRYAENTISRNHHKQETTIDEYTGEMRVLSVRLGKFKKLNSEEEHTEEKGE 257
           F  G   G        +S      E  I +     RV SVRLGKF+  N         G 
Sbjct: 205 FNFGFFAGDDGGGGVRVSPVQKPAENEIGK-----RVFSVRLGKFRSSNIVNNGEVVVGG 264

Query: 258 SSNSSQNKLNARRCYSMGTYQYVVGDSDLEVM-----KEKSNPANVEGKKISGRSKGESY 317
              +S + L+ RRC+SMG+YQY+V +SDL V      +   N  +VEGKKI+ RSKGES+
Sbjct: 265 GGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPNNEGLKNNKDVEGKKINMRSKGESF 324

Query: 318 SVSKIWQWSKKSGGLP--IPSSSN 329
           SVSKIWQWS K    P   PS +N
Sbjct: 325 SVSKIWQWSNKRSKFPNNHPSETN 339

[Close]

BLAST of Sed0022532 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49
Identity = 144/371 (38.81%), Postives = 199/371 (53.64%), Query Frame = 0


Query: 1   MSRFSNEMKQKDGNLINPSPLSPFNGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAII 60
           M++   EMK    NLI+ SP  P           S  S S+  S I+P +LL IIIL+II
Sbjct: 1   MNKILPEMKSTQ-NLISSSPPPPL------IPLKSNTSLSNLNSKITPNILLIIIILSII 60

Query: 61  FFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDT 120
           FFISGLLH+LV+FLL   +P      + +   T    LQ QLQQLF LHDSG+DQS IDT
Sbjct: 61  FFISGLLHILVKFLL---TPSRESREDYFDNVT---ALQGQLQQLFNLHDSGVDQSLIDT 120

Query: 121 LPVFLYKDIMGLK-EPFDCAVCLYEFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLC 180
           LPVF YK I+GLK  PFDC VCL EF  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 121 LPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLC 180

Query: 181 RA------PQNFPLENPNFILGQGNGSYR------------------YAENTISRNHHKQ 240
           R+        +  L +   ++ +   S R                   +E+T  R+  K 
Sbjct: 181 RSNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKS 240

Query: 241 ---ETTIDEYTGEMRVLSVRLGKFKKLNSEEEHTEEKGESSNSSQNKLNARRCYSMGTYQ 300
              +  +D    ++  L V+LGKF+ ++   E +++K  S + +   ++ RRC SMG+Y+
Sbjct: 241 CDPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYE 300

Query: 301 YVVGDSDLEVMKEKSNPANVEGKKISGRSK--------------------------GESY 318
           Y++        +E +   +V  KK+SG+ +                           ES+
Sbjct: 301 YIMD-------QEATLKVHVSTKKLSGKDRVPSHRTVMSECGFDPTVKGIEKSVVERESF 351

[Close]

BLAST of Sed0022532 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 3.3e-48
Identity = 137/314 (43.63%), Postives = 179/314 (57.01%), Query Frame = 0


Query: 39  SSSSF---SSISPTLLLAIIILAIIFFISGLLHLLVRFLLKRPSPPIHRHSNQYPERTGS 98
           SS++F   S ISP++LL IIIL+IIFFISGLLHLLVRFLL     P  R    Y +   +
Sbjct: 37  SSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLL----TPSSRDREDYFDNVTA 96

Query: 99  HTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYKDIMGLKE-PFDCAVCLYEFSNQDRLRLL 158
             LQ QLQQLF LHDSG+DQSFIDTLPVF YK I+GLK  PFDCAVCL EF  +D+LRLL
Sbjct: 97  --LQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLL 156

Query: 159 PICSHAFHIKCIDTWLLSNSTCPLCRAPQNFPLEN-----PNFIL--------------G 218
           P CSHAFH+ CIDTWLLS+STCPLCR+     L +      +F+L              G
Sbjct: 157 PKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGG 216

Query: 219 QGNGSYRYAENT----------ISRNHHKQETTIDEYTGEMRV-------------LSVR 278
             + +   A N           +  N+    T ID   G+  +              SV+
Sbjct: 217 DRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVK 276

Query: 279 LGKFKKLNSEEEHTEEKGESSNS---SQNKLNARRCYSMGTYQYVVGDSDLEVMKEKSNP 304
           LGKF+ ++  E      G SSN+   + + L+ RRC+SMG+Y+Y++ +       E +  
Sbjct: 277 LGKFRNIDIGE------GTSSNNNIGNSSSLDERRCFSMGSYEYIMDE-------ETTLK 331

[Close]

BLAST of Sed0022532 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-42
Identity = 114/264 (43.18%), Postives = 146/264 (55.30%), Query Frame = 0


Query: 25  NGGTDSTSNDSTPSSSSSFSSISPTLLLAIIILAIIFFISGLLHLLVRFLLKRPSPPIHR 84
           +  T +  N   PSS    SSI   L L I  LA+I    G+L+L+ +FL K  +     
Sbjct: 99  SAATLTLMNQKDPSS----SSIVSVLCLVISGLALIIVFLGVLYLIFKFLRKSSTLFPIP 158

Query: 85  HSNQYPERTGSHTLQRQLQQLFRLHDSGLDQSFIDTLPVFLYKDI-MGLKEPFDCAVCLY 144
           H N  P+     +   QLQ LF LHDSGLDQ+ ID LPVFLY ++ + L++PFDCAVCL 
Sbjct: 159 HFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLN 218

Query: 145 EFSNQDRLRLLPICSHAFHIKCIDTWLLSNSTCPLCRAPQNFPLENPNFILGQGNGSYRY 204
           EFS+ D+LRLLP+CSHAFH+ CIDTWLLSNSTCPLCR             L   N  Y +
Sbjct: 219 EFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRS-----------LSTSNVCYNH 278

Query: 205 AENTISRNHHKQETTIDEYTGEMRVLSVRLGKFKKLNSEEEHTEEKGESSNSSQNKLNAR 264
           +E  ++     Q+    + +   RV SVRLG+FK  N  +    +  +           R
Sbjct: 279 SETLVAPLSGHQQVDDGKASLAKRVFSVRLGRFKSTNESQSQRHDVKDEIGVRM----PR 338

Query: 265 RCYSMGTYQYVVGDSDLEVMKEKS 288
           RCYSMGT QY+V D D  V    S
Sbjct: 339 RCYSMGTQQYLVCDQDFVVALSSS 341

The following BLAST results are available for this feature:

BLAST of Sed0022532 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895238.1	1.5e-138	77.97	RING-H2 finger protein ATL46-like [Benincasa hispida]	[more]
XP_022994629.1	5.6e-138	77.07	RING-H2 finger protein ATL46-like [Cucurbita maxima]	[more]
XP_022954939.1	7.3e-138	77.72	RING-H2 finger protein ATL46-like [Cucurbita moschata]	[more]
KAG7012235.1	1.2e-137	77.29	RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023541207.1	1.1e-136	76.94	RING-H2 finger protein ATL46-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0022532 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL07	4.2e-72	47.22	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q8GW38	6.8e-70	51.23	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q9ZV53	2.5e-48	38.81	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q940Q4	4.7e-47	43.63	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q7X843	2.3e-41	43.18	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2	[more]

BLAST of Sed0022532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K3D8	2.7e-138	77.07	RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111490284 PE...	[more]
A0A6J1GUG8	3.5e-138	77.72	RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111457046 ...	[more]
A0A6J1C9N2	8.1e-135	75.56	RING-H2 finger protein ATL46-like OS=Momordica charantia OX=3673 GN=LOC111008727...	[more]
A0A5A7UNJ9	5.8e-133	76.12	RING-H2 finger protein ATL46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3AWE3	1.3e-132	75.84	RING-H2 finger protein ATL46-like OS=Cucumis melo OX=3656 GN=LOC103483362 PE=4 S...	[more]

BLAST of Sed0022532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40250.1	3.0e-73	47.22	RING/U-box superfamily protein	[more]
AT1G23980.1	4.8e-71	51.23	RING/U-box superfamily protein	[more]
AT2G18650.1	1.8e-49	38.81	RING/U-box superfamily protein	[more]
AT4G30400.1	3.3e-48	43.63	RING/U-box superfamily protein	[more]
AT3G48030.1	1.6e-42	43.18	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 138..179 e-value: 5.2E-7 score: 39.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 137..180 e-value: 3.2E-13 score: 49.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 138..180 score: 12.341748
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 113..185 e-value: 1.0E-20 score: 74.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..305
None	No IPR available	PANTHER	PTHR45768:SF32	RING-H2 FINGER PROTEIN ATL46-LIKE	coord: 1..330
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 1..330
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 137..180 e-value: 1.88585E-18 score: 75.8013
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 117..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022532.1	Sed0022532.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding