Sed0022524 (gene) Chayote v1

Overview


Name	Sed0022524
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cytochrome c oxidase assembly factor 5
Location	LG07: 38834041 .. 38839010 (-)
RNA-Seq Expression	Sed0022524
Synteny	Sed0022524

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTTTCCTCAATATTGGGAAATTTTCTGAAGTGGGCCATCATATATTTATATTGTAGCCCAATCAATATGGCCCATTGTTCACTTTCTTCTTCTTCGTCGTCGAGAGTTCGCAGCGATCGCCGTCGTCGATTTCTCTCACCGGGAAAGCTCCGCCGTCAAGGTTCGATTCATTTCTTCGCGTTCTTTGCTGCTGTTTCTTCTATTTCACTTTCGTTCTGCAACTGTATGTTCATTTTATTCGCATCTCAATTCCATAGCCTCTCTCTCATTTGCCTCGTTCTTGTTCTCTAATGATTTCTCCAGCTCGGATCCTTCTGATTTCATAGAAATTTTCGCATTACCTTTTGTATTCAGCTCTATATGATGCGTTCATGACTTCTAATTGGTCGCTGGTTTCTATTTATTGATCTTACGCCTTACTGATATCCCAAGAATTTATCGTTCTATCAAAATTTTCAACGAATTTGACTGTGTAAACTTTAAAATATAGAAAATAAAAGTAAAGAGAAGATGAATTAGCACTTGGAATTACAGTGGTTCGAAGCATGTAGATCACACTCTCTCAATCTCTACTTTTTTTATATGAAAAGTTGTTTGATGTTCTAAGAAGTTTAGAGTCTTAGTATACAAGATAAAAGTAAGTGTTACAAATCTCCTTCGTTACTTCTTGATATTGCTAACTCCTTCGTATTGATATCTCTTTGATAAATCCTTTAAGAACTTTACTTAATTGTTGAGGTCGTTGAAACTATCAAAACAATTAATCTGTTTAATATAACTCCTTGATATTCGTAGGATTTCGTCCCCAAGAGTTGGCGCACTGGTTGAAGACTTGGGCTTTGAGGGTTTGCTCTCCTCAAGGTCCCGAGTTCGAGTCTCCCCTGTGACATTACTCCTTCGATGTCTCCGGTGCCTAGTCTTGGGACGGGCATGGTTATCTTATTTAAAAAATAATAATATATATATACATACATACTCGAAGGAGTGCAACTCGTTGCTCTTTGTTTTAATTGTCGTTTTTGGGTTGAATGAATTTGTTTCGACAACTGTTACGGATTGATTAGTCAGCACAGTGGTGCAATGTGTATTTAGAGTTTGGTGTGTGATTGGCAACCGTGCTCCACGTTATAGATTGTTTTATTTGATTGTCAGCGCTTTCCTGCGAGTTGAGAATCAGCTTGGCTAATATTTATTGAGAAGGCGGCTACTAGGGGGTAGAAGAAGGTCCATGAGAAACTGAATGCTCTGAACGAAGTTAATTGTGATTCTTTTAGCGAGGATTTGAGGCGTAACAGAAATTGAAAACTTTGAGGAAGGTAGAGATTAAATTAAGGGGAAGGATGTCCAAGTCTTGCAAAGGGTTGGCACTGGAACTGGTCAAGTGTCTCAGCGAATCCGATTGCGTAAAGGTCATATATAATCAAGTTTTCATTGTATATGCATAGATCCTTAGATTAGTACTTGGATAATTTTTATCATGGAATTAGCATCTATTTTTCTGAAGTGCACTTCTTATTTGTTGGCAATTGTCTGCAACAGAAATTATAGAATGTACAGTCTTGACGAATGTATTAGATTAGAACACTCTATCATGATTCATGAGGAATGAAATAAGGATGGTATGTTGTTGCTTTTATTGAACATGGGTTTTCTGTCATCTGTTGTGAATTCAGGTTCAGAATCGGACTTATAGAGAATGTGCTGGAGAGAAGAGTCCATGTATACCTAGTGAATGTGTGGGATTAAGGGAAACATATTTCAACTGTAAAAGGGGCCAGGCAAGTTTTCATTAACTCTTCTCCCAACCTCGTGCAACCACTCACCTCTTTAATTAAGTTAATCGCAATCATGCTTGAACTTTATGAGGTGCTTATATGATGTCAAATTGATCCTAACTCTTAAGTTAGCAGACTGTGGACAGATAATTAGTCACTTCTTTATTCTCTAGCATCATTCTTTTTTTGCTTCTCAATGGGAAGTAGAGATTACATTTGTGTGTTGGAGCTATCCCAAAGGGAGTTCCAAAATAATATTTAGGAGATGCTGGAAAATTTCTTGAAAAGAAATCATAGGCTTTTTGAAATTAAAGACAAAGGGAACTTGTTAGTGACTACCGCCATCTATTTCCTCTTCTTTCTGTCAGAAAGGGCGAGGGAAAGTGAATAGTGTATAGTTATTCCTAGTGGATTCTTCAGTGTTCTACTTTATTTTTGGTCCTTAACACAAATAATGGAGCTTTCTTTGAAATTTTGGCCAGCCAAATGACCTAAAAGGGGTGTGAGTTTAAACAATTGCATAATGCATATGGAGTTTTTCCTCAAAATCTAATAGGATGAATAATATGCCGTTGCTTTGTGGTCTTTGGTCGAGGAGGTGGTTGGGAAGGTTGAGTGCAAAGCAAGTGATTTACGTTTTATCTTATTCGGGTTTGCAGTATGCCGTTGGGCAACAGCTCAATTTACCCAACCCAAGAAGGTTAAGGTTTTGAATGTGCAAGCTGGAGAAATAACAAAAACTATATCTCTCTTACGGTGGAAGGTTAACATTATGTCACCATGTGCAAGCAAATCTACCTGCCTAGGGGAAAAGCTGGCAGCATTTTTGGAAAAGACGACGAGTAGGATGGCTCCTCATAGAGGGGTAGCTTATCCACTTCGTACTTTCAGAGGTGATCTCGTGCCTAAAAAAATGGAGGCTTAGAGGCTGGGAATGGGAGAAAAAGAAATTAAGTATTAGTGAAAAAAATGAGTGGAGATCTTGAAATTAATCCAATTGCATTTATGATTTAACAAGCAGCATTTACAAAAAACCAAGGATCTCTGAAGGGCAGCCTCATTGGTAAGAATTTGGGGTCTCTTGTAAAGTCTCACGTTCGAGCTATTGGAAGAGCTTAAAAATATAAACCCATGATGTCTCCTTGGGTCCGGGCCTTGAAGTGGGTGTGGGTACCTGCGTTAGGAGAGCAAAGGTCAAAACTTTCCACTTATTAAAAAAAATGATAAAAGAAGGGGGAGTGACCTGCTTCGGAAGAGAAGGCAGAAGTGCCCGCGTCTCTATATGACACATGACAAAGTTGAAAGGGCACCATACATATCTCTGCTATCAGATTAGGAGAAAAGATAGATACAGAGATATGAAATGGCTCAATGTAACCCAAAGCCATTTGTGAGTTTTGTTTATGGTTGAATGTAACCTAAAGCCAGTAAAAGAATTATGAAATGAGGTATCAAGAACCTGGAATGCGTTGTGTTATGAAATCGGAACAAAAATCAAGATAAAATAAAAAGAAAACGTGAGACCCAACACAATGATTTACGTGGTTCACTAACAGTGTGTTAGCTACGCCCACGGGCAGAGAAGAGAACAATTTTATTAATCTTGGTGATACAGAATTCAGAATGTCGATCAAATGGGAGTAGGATTTTAAGAGAGTTTATATAGTACACTCACATAGAACCCCATTATAAAATATGACTCAAATACTAGATTCCTGCTCATTGACCGGGTGAGATCCTCAGTTAAGTAATCGTGGGGCATCATAGTTCAAGGTATATTTCAACATGCTGACTTTTACAGGCACTTGAATTTAGTGAACTTAAGGACCTGCTGGATTTGCTAGAAAATGAGCAGATTAGAGTGTTGATATATGAGAGATCGTGAACTTCCACTTTTTGGGTTCAACATTTGTATTATCTAATGGATGCAATAGGGGTCTAGAAAGGAAGCCTATAGGGGAGTGAGAACAAGAAAGTATCCCAAAAAAGGCTTTTAAGTGTGTGCCTGCATAGCTTATCCTCGTGAACTCAAAACTTCTTAAAGATGTAGACTCGTTGTCCTTCAATTATTTCGTACCCCACAGGGTGCTCTTGGAAGAAAGTGAAGGAACTGACTGTTTTCTAAGGATATTGCTGAAATTCTAGGGTAGAGCTTCTAGTTTGAAAGAAACAATAGGGTCTTTTAACCGAAATTGTATAGACGGGCACTTCTCACAAAATAATTATAAATGTAGGCAAATTATAAATACCCATTAATACCAGTAGTATAAGAAAGTGTATGACAATACTCATTAATATAATGGCTATATTTGTTAAATTTTTTTTAAAGTGATCATATTTGTAAGTCGTAAATTTTTAAATAAAAAAAACAATAGGGTTGATAGTGGATAAATTTTGAATCAGCTAAGTTTACTAGGTTTCTATCTAATAACTGCACTTACAGAGTAGTTTACACTTCCATAAGTTGGGCCTTTTTTGGGTAGAGTGGTTTTGTTGGTATATCTGGATAAAAGTTCTTTCTAAATCAATGATAAGTGATTCCTGCCAACAAGAGCATAAGTATATGTTCATAACGAAGGGATCATGAATTTGAATTTCCTCACTCTCAATGGTTGATCTCAAAAAAGAGAAAAAAAAAAGTGATTTCTATTTCTAATAGAAAAAAAGGATCAGACGATATGTTCCGTCAATGGAAGCTATGTATAATTTGTTTTCCTTTAGTTATGGATCTCATCTGGTTAGATGACTAAAATTGATGCAAATACATCGCATAACGCACAATGCATCTCGAAAATTCCAGGTTGACATGAGGGCGAGGATTCGAGGGAACAAAGGTTATTGAATGAATGGGAGATGGAGGTTCCATGTGAAGAAGTTTGAAACTTTTTGATTGTCTGCCAATGACCTGTAAAAATCTTACCCTTCTGCATAGCTTTCTGTTTTTGCTTACCTGAAGAATTTTTCATTAATCTGCTTAATGAAGCCAGTAGCCAAATATGTAGTCCTGGGTTAATCTTCTTCCTTTTTGGTTATGGTCAGATTGATTGATTATTTCCTTTTTTTTCTGTCTTGAGATTTTTACATTGATTTGATCATGGCTGTTCAGTATTGAACTTTTTACCATTACACAAGAGCATACACTGCTATTCACTTGACATTAATAACTTATTTATTATTATTATTGTTATTAA

mRNA sequence

GTTTCTTTCCTCAATATTGGGAAATTTTCTGAAGTGGGCCATCATATATTTATATTGTAGCCCAATCAATATGGCCCATTGTTCACTTTCTTCTTCTTCGTCGTCGAGAGTTCGCAGCGATCGCCGTCGTCGATTTCTCTCACCGGGAAAGCTCCGCCGTCAAGCGCTTTCCTGCGAGTTGAGAATCAGCTTGGCTAATATTTATTGAGAAGGCGGCTACTAGGGGGTAGAAGAAGGTCCATGAGAAACTGAATGCTCTGAACGAAGTTAATTGTGATTCTTTTAGCGAGGATTTGAGGCGTAACAGAAATTGAAAACTTTGAGGAAGGTAGAGATTAAATTAAGGGGAAGGATGTCCAAGTCTTGCAAAGGGTTGGCACTGGAACTGGTCAAGTGTCTCAGCGAATCCGATTGCGTAAAGGTTCAGAATCGGACTTATAGAGAATGTGCTGGAGAGAAGAGTCCATGTATACCTAGTGAATGTGTGGGATTAAGGGAAACATATTTCAACTGTAAAAGGGGCCAGGTTGACATGAGGGCGAGGATTCGAGGGAACAAAGGTTATTGAATGAATGGGAGATGGAGGTTCCATGTGAAGAAGTTTGAAACTTTTTGATTGTCTGCCAATGACCTGTAAAAATCTTACCCTTCTGCATAGCTTTCTGTTTTTGCTTACCTGAAGAATTTTTCATTAATCTGCTTAATGAAGCCAGTAGCCAAATATGTAGTCCTGGGTTAATCTTCTTCCTTTTTGGTTATGGTCAGATTGATTGATTATTTCCTTTTTTTTCTGTCTTGAGATTTTTACATTGATTTGATCATGGCTGTTCAGTATTGAACTTTTTACCATTACACAAGAGCATACACTGCTATTCACTTGACATTAATAACTTATTTATTATTATTATTGTTATTAA

Coding sequence (CDS)

ATGTCCAAGTCTTGCAAAGGGTTGGCACTGGAACTGGTCAAGTGTCTCAGCGAATCCGATTGCGTAAAGGTTCAGAATCGGACTTATAGAGAATGTGCTGGAGAGAAGAGTCCATGTATACCTAGTGAATGTGTGGGATTAAGGGAAACATATTTCAACTGTAAAAGGGGCCAGGTTGACATGAGGGCGAGGATTCGAGGGAACAAAGGTTATTGA

Protein sequence

MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY

Homology

[Close]

BLAST of Sed0022524 vs. NCBI nr
Match: XP_008446948.1 (PREDICTED: cytochrome c oxidase assembly factor 5 [Cucumis melo] >XP_022139307.1 cytochrome c oxidase assembly factor 5 [Momordica charantia] >XP_022139308.1 cytochrome c oxidase assembly factor 5 [Momordica charantia] >XP_031741572.1 cytochrome c oxidase assembly factor 5 [Cucumis sativus] >XP_031741573.1 cytochrome c oxidase assembly factor 5 [Cucumis sativus] >XP_038889422.1 cytochrome c oxidase assembly factor 5 [Benincasa hispida] >KGN52313.1 hypothetical protein Csa_009226 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 2.3e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. NCBI nr
Match: XP_022956695.1 (cytochrome c oxidase assembly factor 5 [Cucurbita moschata] >XP_022975987.1 cytochrome c oxidase assembly factor 5 [Cucurbita maxima] >XP_023534123.1 cytochrome c oxidase assembly factor 5 [Cucurbita pepo subsp. pepo] >XP_023534138.1 cytochrome c oxidase assembly factor 5 [Cucurbita pepo subsp. pepo] >KAG6601133.1 Cytochrome c oxidase assembly factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150.6 bits (379), Expect = 5.1e-33
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. NCBI nr
Match: XP_031405462.1 (mitochondrial protein pet191 homolog [Punica granatum] >PKI63304.1 hypothetical protein CRG98_016295 [Punica granatum])

HSP 1 Score: 146.7 bits (369), Expect = 7.4e-32
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M+KSCKGLA+ELVKCLSESDCVKVQ R+YRECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MAKSCKGLAMELVKCLSESDCVKVQKRSYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. NCBI nr
Match: XP_012090139.1 (mitochondrial protein pet191 homolog [Jatropha curcas])

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-31
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKV+ R+YRECAGEKSPCIPSECVGLRETYFNCKRGQ+D
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVEKRSYRECAGEKSPCIPSECVGLRETYFNCKRGQLD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. NCBI nr
Match: XP_021615629.1 (mitochondrial protein pet191 homolog [Manihot esculenta] >OAY48397.1 hypothetical protein MANES_06G155800v8 [Manihot esculenta])

HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31
Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDC+KV+ R+YRECAGEKSPCIPSECVGLRETYFNCKRGQ+D
Sbjct: 1  MSKSCKGLAMELVKCLSESDCIKVEKRSYRECAGEKSPCIPSECVGLRETYFNCKRGQLD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. ExPASy Swiss-Prot
Match: Q5RFJ0 (Cytochrome c oxidase assembly factor 5 OS=Pongo abelii OX=9601 GN=Coa5 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-07
Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 4  SCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
          +C GL  +L  CL ESDCV  + ++ R+C  E        C  L+  +F CKR  +D RA
Sbjct: 13 ACGGLKEDLGACLLESDCVVQEGKSPRQCLKE------GYCNSLKYAFFECKRSVLDNRA 72

Query: 64 RIRGNKGY 72
          R RG KGY
Sbjct: 73 RFRGRKGY 74

[Close]

BLAST of Sed0022524 vs. ExPASy Swiss-Prot
Match: O42921 (Mitochondrial protein pet191 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC16A3.16 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-07
Identity = 28/66 (42.42%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M +SCK +  +L  CL  SDC+ V+ ++ REC   K   +P EC  L E Y  CKR  +D
Sbjct: 1  MGRSCKVIREDLANCLLHSDCMFVKKKSARECLKNKDE-LPEECKNLIEAYGECKRQMLD 60

Query: 61 MRARIR 67
          M  R R
Sbjct: 61 MTKRYR 65

[Close]

BLAST of Sed0022524 vs. ExPASy Swiss-Prot
Match: A1L3N6 (Cytochrome c oxidase assembly factor 5 OS=Xenopus laevis OX=8355 GN=coa5 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-07
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 5  CKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRAR 64
          C G+  +L  CL +SDCV  + ++ +EC  E        C  L+ T+F CKR  +D RAR
Sbjct: 15 CGGVKEDLKNCLLQSDCVLQEGKSPKECLKE------GYCKALQVTFFECKRSILDNRAR 74

Query: 65 IRGNKGY 72
           RG KGY
Sbjct: 75 FRGRKGY 75

[Close]

BLAST of Sed0022524 vs. ExPASy Swiss-Prot
Match: Q3ZCK8 (Cytochrome c oxidase assembly factor 5 OS=Bos taurus OX=9913 GN=COA5 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07
Identity = 26/68 (38.24%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 4  SCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
          +C G+  +L  CL +SDCV  + ++ R+C  E        C  L+ ++F CKR  +D R+
Sbjct: 13 ACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKE------GNCKALKYSFFECKRSMLDARS 72

Query: 64 RIRGNKGY 72
          R RG KGY
Sbjct: 73 RFRGRKGY 74

[Close]

BLAST of Sed0022524 vs. ExPASy Swiss-Prot
Match: Q86WW8 (Cytochrome c oxidase assembly factor 5 OS=Homo sapiens OX=9606 GN=COA5 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07
Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 4  SCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
          +C GL  +L  CL +SDCV  + ++ R+C  E        C  L+  +F CKR  +D RA
Sbjct: 13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKE------GYCNSLKYAFFECKRSVLDNRA 72

Query: 64 RIRGNKGY 72
          R RG KGY
Sbjct: 73 RFRGRKGY 74

[Close]

BLAST of Sed0022524 vs. ExPASy TrEMBL
Match: A0A6J1CDL1 (cytochrome c oxidase assembly factor 5 OS=Momordica charantia OX=3673 GN=LOC111010254 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. ExPASy TrEMBL
Match: A0A0A0KRS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623760 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. ExPASy TrEMBL
Match: A0A1S3BGA9 (cytochrome c oxidase assembly factor 5 OS=Cucumis melo OX=3656 GN=LOC103489506 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. ExPASy TrEMBL
Match: A0A6J1IEJ6 (cytochrome c oxidase assembly factor 5 OS=Cucurbita maxima OX=3661 GN=LOC111476521 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-33
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. ExPASy TrEMBL
Match: A0A6J1GYH3 (cytochrome c oxidase assembly factor 5 OS=Cucurbita moschata OX=3662 GN=LOC111458337 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-33
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          MSKSCKGLA+ELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. TAIR 10
Match: AT1G10865.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 2.3e-31
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
          M+KSCKGLA ELVKCLSES CVK + R+ R+C GEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct: 1  MAKSCKGLAEELVKCLSESICVKGEKRSIRDCTGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query: 61 MRARIRGNKGY 72
          MRARIRGNKGY
Sbjct: 61 MRARIRGNKGY 71

[Close]

BLAST of Sed0022524 vs. TAIR 10
Match: AT1G10865.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-23
Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 1  MSKSCKGLALELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ 59
          M+KSCKGLA ELVKCLSES CVK + R+ R+C GEKSPCIPSECVGLRETYFNCKRGQ
Sbjct: 1  MAKSCKGLAEELVKCLSESICVKGEKRSIRDCTGEKSPCIPSECVGLRETYFNCKRGQ 58

The following BLAST results are available for this feature:

BLAST of Sed0022524 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446948.1	2.3e-33	98.59	PREDICTED: cytochrome c oxidase assembly factor 5 [Cucumis melo] >XP_022139307.1...	[more]
XP_022956695.1	5.1e-33	97.18	cytochrome c oxidase assembly factor 5 [Cucurbita moschata] >XP_022975987.1 cyto...	[more]
XP_031405462.1	7.4e-32	94.37	mitochondrial protein pet191 homolog [Punica granatum] >PKI63304.1 hypothetical ...	[more]
XP_012090139.1	1.6e-31	92.96	mitochondrial protein pet191 homolog [Jatropha curcas]	[more]
XP_021615629.1	2.1e-31	91.55	mitochondrial protein pet191 homolog [Manihot esculenta] >OAY48397.1 hypothetica...	[more]

BLAST of Sed0022524 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RFJ0	1.0e-07	42.65	Cytochrome c oxidase assembly factor 5 OS=Pongo abelii OX=9601 GN=Coa5 PE=3 SV=1	[more]
O42921	1.0e-07	42.42	Mitochondrial protein pet191 homolog OS=Schizosaccharomyces pombe (strain 972 / ...	[more]
A1L3N6	1.3e-07	41.79	Cytochrome c oxidase assembly factor 5 OS=Xenopus laevis OX=8355 GN=coa5 PE=3 SV...	[more]
Q3ZCK8	1.7e-07	38.24	Cytochrome c oxidase assembly factor 5 OS=Bos taurus OX=9913 GN=COA5 PE=3 SV=1	[more]
Q86WW8	1.7e-07	41.18	Cytochrome c oxidase assembly factor 5 OS=Homo sapiens OX=9606 GN=COA5 PE=1 SV=1	[more]

BLAST of Sed0022524 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDL1	1.1e-33	98.59	cytochrome c oxidase assembly factor 5 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0KRS4	1.1e-33	98.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623760 PE=3 SV=1	[more]
A0A1S3BGA9	1.1e-33	98.59	cytochrome c oxidase assembly factor 5 OS=Cucumis melo OX=3656 GN=LOC103489506 P...	[more]
A0A6J1IEJ6	2.5e-33	97.18	cytochrome c oxidase assembly factor 5 OS=Cucurbita maxima OX=3661 GN=LOC1114765...	[more]
A0A6J1GYH3	2.5e-33	97.18	cytochrome c oxidase assembly factor 5 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Sed0022524 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10865.1	2.3e-31	85.92	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G10865.2	1.8e-23	82.76	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018793	Cytochrome c oxidase assembly protein PET191	PFAM	PF10203	Pet191_N	coord: 2..68 e-value: 2.9E-24 score: 85.1
IPR018793	Cytochrome c oxidase assembly protein PET191	PANTHER	PTHR28627	CYTOCHROME C OXIDASE ASSEMBLY FACTOR 5	coord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022524.1	Sed0022524.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033617	mitochondrial cytochrome c oxidase assembly
cellular_component	GO:0005739	mitochondrion