Sed0022483 (gene) Chayote v1

Overview


Name	Sed0022483
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribosomal protein
Location	LG01: 57682917 .. 57685736 (-)
RNA-Seq Expression	Sed0022483
Synteny	Sed0022483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGTTGAAACTGCTACTCAATTCTGTCTTATTCACGTTTGTTCTTCCTTAATCTGACGCTTACTTCTTGTTTCTTTTTCTTTCTAGACATTGCGTTTGATTTCTCAACTTGTTTGATTAGTTTTGTTCTTTTTGATTTCCTTCTCAGCAACTCCGTAGCTGCTTCTTTGTAAGGCTCCGAAAATGAGGTATGTTGGGCGTTTGTATGTAGTTTGATTTACAATCAGGATCTTCTTATAGAACACATAATTGATTAGTTCATCTGCTGATGTTTTTGTTATATATGCTGTAATTTTAGTTAGTTGTATTCCTTAATCCAGCAAGTGATTGGAAAATTTAGTTTAGGTAGATTTGGAATTATGAAGTTGCAAGGCTAGATTTAAACGATTTCATGTTTCTACCAATACTGGAATCACAATCTTGTGTATGGGAGGTTTTGGTTGCTGTGTGGTTTTGCGTTATGGGTTTATTGACCGGTTACTGAATGGAGTTTTTTCGGTTTTAATCTGCAGCAAACTTCAGAGTGAAGCTTTGAGGGAAGCCATTTCAACTATCTTCAGTGATAGCAATGAAAAGAAGCGCAACTTCACTGAGACCATTGAACTTCAAATTGGACTTAAGAACTATGATCCTCAGAAGGATAAGCGTTTCAGCGGTTCAGTGAAGCTGCCCCATATCCCTCGCCCTAAGATGAAGCTTTGCATGCTCGGAGATGCTTTGCATGTTGAAGAGGTAAACTTTATCTAGTCTCCTTATTTTTTTTGTAAGCCATAGGGAGATGGTTTATTTAATTCTTGGGTAACATAACATGCCAAGCCTGTCAGCTTAACTGTTGTGCTATTTTGTGTATGGTTTGTTGCAATTTTACTTGCTACTCTGTTCAGAATCTGCTTGTGAATTCTCAACAGCTATAAAATCTAGACAATGTTTATAGTTTTTACCTGGAATGTGTTAGGTATCCGATACCTAACAAGTTCCTTGGAATACACAAGACAATAACAACCAAATAGCTAGAAATAATAGTAGAAACCACACTATATTTCATATATCATTAATAAACCAACGATTTAGTACAAACTTAATAGAAATAACAAGATAAGATAATGAAGAAATGATAAGCTGACCGGTGTATTCGAAAGCACCGGAATCCCTCCTCCAAGTCCTCAGATCTAGCCTCCACCAAAATAAGACTCCTCCTCTAAACCCCCTCCTTACAACATTTATACCCCAAGAGCTTCTCTCTTCCCCTTCAATAAAATGACCTATTTATGGAATTACCCAATTTGCCCTTTCTAGAACATTTATAGGAATTGAGGTCCTTACAGAATGATGCTGAATTATTTATGCTAGGCACGTTATCAGTAACTTTGTACTTAACTGGAAAATAACTGGAAAATAACATACTGCTTTAGAATTTCAATCTTGGTAAATTCTAATTAAAGACTGTTGCAGTTCAGCTTTTCCCTTTTACTTATTTATTGTGTATGCATGTTATAGGCGGAGAAGATTGGCTTGGATTATATGGATGTGGAAAGTTTGAAGAAGTTGAACAAGAACAAAAAGTTGGTGAAGAAACTCGCCAAGAAATATCATGCATTTTTAGCATCTGAAGCAGTCATCAAGCAAATTCCCCGTCTTTTGGGCCCTGGGCTCAACAAGGCAGGCAAGTGTTCTTATGATTATTTTACATCTGGAATTTCCCTTTTGATCTGGTATTTGAAATTTGTTACTTCGTATTTTATCTTGTGTTTAGGCTCATGTTGCCTGCATGCTTGTAAACTGAGTTTCAATCTTGTCTTTTGAATATGTTGTTTTGTGTTGCCTAACTCAAATAAGGAAGTCTGTATTTCTCGATCTTACATTGACATCTACATTTTTGCCACAGGTAAGTTCCCAACCCTGGTTTCTCACCAAGAATCTCTTGAGTCTAAAGTTAACGAGTCAAAGGCAATGGTTAAATTTCAACTGAAGAAAGTCCTTTGCATGGGTGTTGCTGTCGGTAACGTTTCCATGGAGGAGAAACAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTAAGTTATAATCCTTACTTTTTTGTCACCATAAAATTTTAGTTCTCTGTTCGAATACCAAACATGCTAAAGGTTTGTCTCATTTCAGTACTATAATATCACCCTCTTTTATTGTTCTTTAGAACATACTTGGCACATACACTTACAAATGTCACCAAGTTGTGTAGATAATAAATGGTTGGTCTCGTAAGAATAGCATAATTTGTTGGTACACTATTCGAGGATAGCAAATAAATCATAGAGTTCTCTGCACATAATTTAGCTCTGCCATTTTGACTTTTACTCACGTATTTTTTGTATGTTTCTTTTGTTCATCAGGTGAGGTGTTTGTACCTGAAGAGTACTATGGGGAAAGCATACCGAGTCTTCTGAGCAAATTTTGAATTTAGCTTCTACTGTTTGTTCTCTATTTTAAGAACCACTAGCTGCCAATCCTCGACACTTATGATGGGAGTGATATTTTTTCCTCTTTGTTTCACTCAGTTTTGTAGTTTTCCCTTCAATTTATAATATGCATTTGGCTTATTTTGATGAAGAATATCAAATCATAGTTCCTAAGAAAAATTTGTATCTTGTATTTTAATTAATTTAGTTTTAAACGAAGGTCCTCTCAAAGACGGTTGAACATTGAGAATTATAAAATCTTGGTGTGTGTTTGGAGCATTGGTTTGGTCATTGTAGACGGAAGATTATGATAAATGGTGGGTTATTATAAATAGTATTTGAA

mRNA sequence

ATTTTGTTGAAACTGCTACTCAATTCTGTCTTATTCACGTTTGTTCTTCCTTAATCTGACGCTTACTTCTTGTTTCTTTTTCTTTCTAGACATTGCGTTTGATTTCTCAACTTGTTTGATTAGTTTTGTTCTTTTTGATTTCCTTCTCAGCAACTCCGTAGCTGCTTCTTTGTAAGGCTCCGAAAATGAGCAAACTTCAGAGTGAAGCTTTGAGGGAAGCCATTTCAACTATCTTCAGTGATAGCAATGAAAAGAAGCGCAACTTCACTGAGACCATTGAACTTCAAATTGGACTTAAGAACTATGATCCTCAGAAGGATAAGCGTTTCAGCGGTTCAGTGAAGCTGCCCCATATCCCTCGCCCTAAGATGAAGCTTTGCATGCTCGGAGATGCTTTGCATGTTGAAGAGGCGGAGAAGATTGGCTTGGATTATATGGATGTGGAAAGTTTGAAGAAGTTGAACAAGAACAAAAAGTTGGTGAAGAAACTCGCCAAGAAATATCATGCATTTTTAGCATCTGAAGCAGTCATCAAGCAAATTCCCCGTCTTTTGGGCCCTGGGCTCAACAAGGCAGGTAAGTTCCCAACCCTGGTTTCTCACCAAGAATCTCTTGAGTCTAAAGTTAACGAGTCAAAGGCAATGGTTAAATTTCAACTGAAGAAAGTCCTTTGCATGGGTGTTGCTGTCGGTAACGTTTCCATGGAGGAGAAACAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTGAGGTGTTTGTACCTGAAGAGTACTATGGGGAAAGCATACCGAGTCTTCTGAGCAAATTTTGAATTTAGCTTCTACTGTTTGTTCTCTATTTTAAGAACCACTAGCTGCCAATCCTCGACACTTATGATGGGAGTGATATTTTTTCCTCTTTGTTTCACTCAGTTTTGTAGTTTTCCCTTCAATTTATAATATGCATTTGGCTTATTTTGATGAAGAATATCAAATCATAGTTCCTAAGAAAAATTTGTATCTTGTATTTTAATTAATTTAGTTTTAAACGAAGGTCCTCTCAAAGACGGTTGAACATTGAGAATTATAAAATCTTGGTGTGTGTTTGGAGCATTGGTTTGGTCATTGTAGACGGAAGATTATGATAAATGGTGGGTTATTATAAATAGTATTTGAA

Coding sequence (CDS)

ATGAGCAAACTTCAGAGTGAAGCTTTGAGGGAAGCCATTTCAACTATCTTCAGTGATAGCAATGAAAAGAAGCGCAACTTCACTGAGACCATTGAACTTCAAATTGGACTTAAGAACTATGATCCTCAGAAGGATAAGCGTTTCAGCGGTTCAGTGAAGCTGCCCCATATCCCTCGCCCTAAGATGAAGCTTTGCATGCTCGGAGATGCTTTGCATGTTGAAGAGGCGGAGAAGATTGGCTTGGATTATATGGATGTGGAAAGTTTGAAGAAGTTGAACAAGAACAAAAAGTTGGTGAAGAAACTCGCCAAGAAATATCATGCATTTTTAGCATCTGAAGCAGTCATCAAGCAAATTCCCCGTCTTTTGGGCCCTGGGCTCAACAAGGCAGGTAAGTTCCCAACCCTGGTTTCTCACCAAGAATCTCTTGAGTCTAAAGTTAACGAGTCAAAGGCAATGGTTAAATTTCAACTGAAGAAAGTCCTTTGCATGGGTGTTGCTGTCGGTAACGTTTCCATGGAGGAGAAACAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTGAGGTGTTTGTACCTGAAGAGTACTATGGGGAAAGCATACCGAGTCTTCTGA

Protein sequence

MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF

Homology

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BLAST of Sed0022483 vs. NCBI nr
Match: XP_022945884.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo] >KAG6573621.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012702.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.3 bits (1048), Expect = 4.1e-110
Identity = 209/216 (96.76%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF+DSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Sed0022483 vs. NCBI nr
Match: XP_022967120.1 (60S ribosomal protein L10a [Cucurbita maxima])

HSP 1 Score: 407.1 bits (1045), Expect = 9.2e-110
Identity = 208/216 (96.30%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF+DSN+KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNDKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Sed0022483 vs. NCBI nr
Match: XP_022943718.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal protein L10a [Cucurbita moschata] >XP_022985885.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_022985886.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_023513214.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.6e-109
Identity = 208/216 (96.30%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF DS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Sed0022483 vs. NCBI nr
Match: XP_022958674.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023532799.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.1e-109
Identity = 208/216 (96.30%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF DS EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIG+DYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Sed0022483 vs. NCBI nr
Match: XP_022932197.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023520953.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo] >KAG6583662.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019322.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.2 bits (1040), Expect = 3.5e-109
Identity = 207/216 (95.83%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF+DSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Sed0022483 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 7.8e-104
Identity = 194/216 (89.81%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI+TI   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL+ MDVESLKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVSHQESLESKVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Sed0022483 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-103
Identity = 190/216 (87.96%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE+LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Sed0022483 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-103
Identity = 190/216 (87.96%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE+LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Sed0022483 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.5e-102
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI+TI   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL  MDVE+LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVSHQESLE+KVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Sed0022483 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.3e-102
Identity = 193/217 (88.94%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAIS+I +   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMK+CMLGDA HVEEAEKIGL+ MDVE+LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVF 180
           PRLLGPGLNKAGKFPTLVSHQESLESKVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Sed0022483 vs. ExPASy TrEMBL
Match: A0A6J1G271 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111449992 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 209/216 (96.76%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF+DSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Sed0022483 vs. ExPASy TrEMBL
Match: A0A6J1HTI9 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111466620 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-110
Identity = 208/216 (96.30%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF+DSN+KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNDKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Sed0022483 vs. ExPASy TrEMBL
Match: A0A6J1JCI3 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.6e-110
Identity = 208/216 (96.30%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF DS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Sed0022483 vs. ExPASy TrEMBL
Match: A0A6J1FXB0 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.6e-110
Identity = 208/216 (96.30%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF DS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Sed0022483 vs. ExPASy TrEMBL
Match: A0A6J1K725 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111490772 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.9e-110
Identity = 208/216 (96.30%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAIS+IF DS EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKLCMLGDALHVEEAEKIG+DYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNE+KAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Sed0022483 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 377.9 bits (969), Expect = 5.6e-105
Identity = 194/216 (89.81%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI+TI   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL+ MDVESLKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVSHQESLESKVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Sed0022483 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-103
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI+TI   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL  MDVE+LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVSHQESLE+KVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Sed0022483 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-103
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI+TI   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEK+GL  MDVE+LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVSHQESLE+KVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Sed0022483 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 372.1 bits (954), Expect = 3.1e-103
Identity = 193/217 (88.94%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAIS+I +   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMK+CMLGDA HVEEAEKIGL+ MDVE+LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVF 180
           PRLLGPGLNKAGKFPTLVSHQESLESKVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Sed0022483 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 372.1 bits (954), Expect = 3.1e-103
Identity = 193/217 (88.94%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MSKLQSEALREAISTIFSDSNE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAIS+I +   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKLCMLGDALHVEEAEKIGLDYMDVESLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMK+CMLGDA HVEEAEKIGL+ MDVE+LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQVF 180
           PRLLGPGLNKAGKFPTLVSHQESLESKVNE+KA VKFQLKKVLCMGVAVGN+SMEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

The following BLAST results are available for this feature:

BLAST of Sed0022483 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945884.1	4.1e-110	96.76	60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal pr...	[more]
XP_022967120.1	9.2e-110	96.30	60S ribosomal protein L10a [Cucurbita maxima]	[more]
XP_022943718.1	1.6e-109	96.30	60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal pr...	[more]
XP_022958674.1	2.1e-109	96.30	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosom...	[more]
XP_022932197.1	3.5e-109	95.83	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosom...	[more]

BLAST of Sed0022483 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZB9	7.8e-104	89.81	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
B8B9K6	1.7e-103	87.96	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	1.7e-103	87.96	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
P59230	1.5e-102	88.43	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]
P59231	4.3e-102	88.94	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]

BLAST of Sed0022483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G271	2.0e-110	96.76	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111449992 PE=3 SV=1	[more]
A0A6J1HTI9	4.5e-110	96.30	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111466620 PE=3 SV=1	[more]
A0A6J1JCI3	7.6e-110	96.30	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1	[more]
A0A6J1FXB0	7.6e-110	96.30	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1	[more]
A0A6J1K725	9.9e-110	96.30	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111490772 PE=3 SV=1	[more]

BLAST of Sed0022483 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	5.6e-105	89.81	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	1.1e-103	88.43	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	1.1e-103	88.43	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	3.1e-103	88.94	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	3.1e-103	88.94	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 20..211 e-value: 5.8E-61 score: 207.4
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 2..214
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..214
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 e-value: 3.3E-48 score: 161.0
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 65..154 e-value: 5.8E-61 score: 207.4
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 23..210 e-value: 4.0E-43 score: 147.5
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 9..215 e-value: 1.49568E-62 score: 191.629
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 21..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0022483.1	Sed0022483.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome