Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAATAGTAGAAAGATGGCAGAAATTGGATTTAACAGAGAAAGAATCGGTAGGAATTGATCTTAATGAAAATTGTTGTGCTCTTTCAAAAGGAAATTTTCATCTCAACGTTGCGGCTAAGATTCTATCTAATCAGATGGTTAATGTAGAGGCTTTTAGAGGAGTAATGAAAACAATCCGGTGTTTTTTTATCAGGAAACTAAAATCGAATACGCAGGTAATAACATTTTCTTGATTCTTTTCAAGAATTTGAATGACAAAGACGGGGTTTTAAGTAATGGTCCGTGGAACTTTGATAAAACACTTGTTGTTCTATCCTCTCCTAAAGAAAGTGAAAGTATAGGAGGTATGAAATTCAAATATTGCCCCTTCTTGATTCAAATTCACAATGTCTCAGTGCAAAACCCTACTATTGAAGCGGTTAAACGCTTGGGGAATACTAATGGGCATGTTAAAGAAATTGATTGGGATGGAGTAAATGAATGGGTTGGCCCTGTTCTTCGTATAAGAATTAGCATTAATATTCAAGAACCAATTCAGAGAGGTTTATTTTTGAAAAATGTGAAGGCAGGAGAATTTGGTGCCCTTTGTATTATGAGAAACTTCCGGATCTTTGCTTTGCCTGTGGTGTTTTTGGATATTCCTCATGAGCGTATAATTTTGCTGTGA
mRNA sequence
ATGGATGAAATAGTAGAAAGATGGCAGAAATTGGATTTAACAGAGAAAGAATCGGTAGGAATTGATCTTAATGAAAATTGTTGTGCTCTTTCAAAAGGAAATTTTCATCTCAACGTTGCGGCTAAGATTCTATCTAATCAGATGGTTAATGTAGAGGCTTTTAGAGGAGTAATGAAAACAATCCGGTGTTTTTTTATCAGGAAACTAAAATCGAATACGCAGAATTTGAATGACAAAGACGGGGTTTTAAGTAATGGTCCGTGGAACTTTGATAAAACACTTGTTGTTCTATCCTCTCCTAAAGAAAGTGAAAGTATAGGAGGTATGAAATTCAAATATTGCCCCTTCTTGATTCAAATTCACAATGTCTCAGTGCAAAACCCTACTATTGAAGCGGTTAAACGCTTGGGGAATACTAATGGGCATGTTAAAGAAATTGATTGGGATGGAGTAAATGAATGGGTTGGCCCTGTTCTTCGTATAAGAATTAGCATTAATATTCAAGAACCAATTCAGAGAGGTTTATTTTTGAAAAATGTGAAGGCAGGAGAATTTGGTGCCCTTTGTATTATGAGAAACTTCCGGATCTTTGCTTTGCCTGTGGTGTTTTTGGATATTCCTCATGAGCGTATAATTTTGCTGTGA
Coding sequence (CDS)
ATGGATGAAATAGTAGAAAGATGGCAGAAATTGGATTTAACAGAGAAAGAATCGGTAGGAATTGATCTTAATGAAAATTGTTGTGCTCTTTCAAAAGGAAATTTTCATCTCAACGTTGCGGCTAAGATTCTATCTAATCAGATGGTTAATGTAGAGGCTTTTAGAGGAGTAATGAAAACAATCCGGTGTTTTTTTATCAGGAAACTAAAATCGAATACGCAGAATTTGAATGACAAAGACGGGGTTTTAAGTAATGGTCCGTGGAACTTTGATAAAACACTTGTTGTTCTATCCTCTCCTAAAGAAAGTGAAAGTATAGGAGGTATGAAATTCAAATATTGCCCCTTCTTGATTCAAATTCACAATGTCTCAGTGCAAAACCCTACTATTGAAGCGGTTAAACGCTTGGGGAATACTAATGGGCATGTTAAAGAAATTGATTGGGATGGAGTAAATGAATGGGTTGGCCCTGTTCTTCGTATAAGAATTAGCATTAATATTCAAGAACCAATTCAGAGAGGTTTATTTTTGAAAAATGTGAAGGCAGGAGAATTTGGTGCCCTTTGTATTATGAGAAACTTCCGGATCTTTGCTTTGCCTGTGGTGTTTTTGGATATTCCTCATGAGCGTATAATTTTGCTGTGA
Protein sequence
MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKTIRCFFIRKLKSNTQNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKFKYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQRGLFLKNVKAGEFGALCIMRNFRIFALPVVFLDIPHERIILL
Homology
BLAST of Sed0022475 vs. NCBI nr
Match:
XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])
HSP 1 Score: 127.5 bits (319), Expect = 1.4e-25
Identity = 66/188 (35.11%), Postives = 107/188 (56.91%), Query Frame = 0
Query: 1 MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT 60
MDEI + W+ T E+ + ++ L+ N L V AK+ +++ ++ EA R VMK+
Sbjct: 1 MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60
Query: 61 I----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKF 120
+ L N ++L++K VLS+GPW F+K+L+VL+SP + M F
Sbjct: 61 VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120
Query: 121 KYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPI 180
+C F IQIHN+ + + E LG G V+EI+ DG + W GP +R+R+ I++ +P+
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180
BLAST of Sed0022475 vs. NCBI nr
Match:
XP_022155933.1 (uncharacterized protein LOC111022932 [Momordica charantia])
HSP 1 Score: 113.6 bits (283), Expect = 2.1e-21
Identity = 61/184 (33.15%), Postives = 102/184 (55.43%), Query Frame = 0
Query: 1 MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT 60
MDEI E W+ LT+++ I ++ ++ N K+ +++ ++VEAFR VMK+
Sbjct: 1 MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60
Query: 61 I----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKF 120
+ I N +++ +K+ VL++GPW+F+ +L+VL+SP ++ M F
Sbjct: 61 LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120
Query: 121 KYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPI 176
+ IQIH + Q + K LG G V+EID +G EW GP +R+R+ I+I +P
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPF 180
BLAST of Sed0022475 vs. NCBI nr
Match:
XP_023926510.1 (uncharacterized protein LOC112037926 [Quercus suber])
HSP 1 Score: 112.1 bits (279), Expect = 6.1e-21
Identity = 71/210 (33.81%), Postives = 111/210 (52.86%), Query Frame = 0
Query: 1 MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT 60
MD++ +W +L L +E+ I L A N + + AK+ + + VN+EA +KT
Sbjct: 1 MDDLTGKWARLSLNTRETQTIPL-----APEVENNNRVLVAKLFTKRRVNIEALSRTLKT 60
Query: 61 ----IRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKF 120
I+ F +R L SNT N D +LS GPW+FDK L+ L P ESES+ KF
Sbjct: 61 MWRSIQNFEVRDLTSNTVLILFSNEVDAKKILSQGPWSFDKYLIGLYKPSESESVDDAKF 120
Query: 121 KYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPI 180
F +QIHN+ + + +G++ G V+++D E G +RIR+++NI++P+
Sbjct: 121 DTASFWVQIHNLPLSRMNRANAEIIGSSLGKVEQVDASPTGECRGRCVRIRVALNIEQPL 180
Query: 181 QRGLFLKNVKAGEFGALCIMRNFRIFALPV 202
RG F V G G L + +F+ +PV
Sbjct: 181 CRGRF---VDMGATGPLWV--SFQYERMPV 200
BLAST of Sed0022475 vs. NCBI nr
Match:
TXG70631.1 (hypothetical protein EZV62_005566 [Acer yangbiense])
HSP 1 Score: 107.8 bits (268), Expect = 1.1e-19
Identity = 66/192 (34.38%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 2 DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK-- 61
+E+ + + L L EKE + L E + L +A K+LS++ VN +AF VM
Sbjct: 5 EEVAKLCEALTLKEKEGPLMQLQEGMTNKGEKRLALRLAGKLLSSKPVNRDAFMAVMPKI 64
Query: 62 --TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKFK 121
TI F I + NT +N D+ +L+ GPW+FDK L+VL PK M F
Sbjct: 65 WVTIDGFDIEIIDGNTFSFTFKNEKDQLRILNRGPWSFDKALLVLVEPKGKGDTQDMSFN 124
Query: 122 YCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQ 181
F +QIH V + T E + +GN G VKEID G ++VG +R+R+ I+I +P++
Sbjct: 125 RVAFWVQIHRVPLICMTSEIGRAVGNMIGEVKEIDDGGSGDYVGKYIRVRVIIDINQPLR 184
Query: 182 RGLFLKNVKAGE 185
L + ++ G+
Sbjct: 185 HILRVDVLRDGK 196
BLAST of Sed0022475 vs. NCBI nr
Match:
XP_023888198.1 (uncharacterized protein LOC112000324 [Quercus suber])
HSP 1 Score: 107.8 bits (268), Expect = 1.1e-19
Identity = 69/210 (32.86%), Postives = 109/210 (51.90%), Query Frame = 0
Query: 1 MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT 60
MD++ +W +L L +E+ I L A N + + AK+ + + VN+EA +KT
Sbjct: 1 MDDLTGKWARLSLNTRETQTIPL-----APEVENNNRVLVAKLFTKRRVNIEALSRTLKT 60
Query: 61 ----IRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKF 120
I+ F + L SN N D +LS GPW+FDK L+ L P ESES+ KF
Sbjct: 61 MWRSIQNFQVHDLTSNIVLILFSNEVDAKKILSQGPWSFDKYLIGLYKPSESESVDDAKF 120
Query: 121 KYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPI 180
F +QIHN+ + + +G++ G V+++D E G +RIR+++NI++P+
Sbjct: 121 DTASFWVQIHNLPLSRMNRANAEIIGSSLGKVEQVDASPTGECRGRCVRIRVALNIEQPL 180
Query: 181 QRGLFLKNVKAGEFGALCIMRNFRIFALPV 202
RG F V G G L + +F+ +PV
Sbjct: 181 CRGRF---VDMGATGPLWV--SFQYERMPV 200
BLAST of Sed0022475 vs. ExPASy TrEMBL
Match:
A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 6.8e-26
Identity = 66/188 (35.11%), Postives = 107/188 (56.91%), Query Frame = 0
Query: 1 MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT 60
MDEI + W+ T E+ + ++ L+ N L V AK+ +++ ++ EA R VMK+
Sbjct: 1 MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60
Query: 61 I----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKF 120
+ L N ++L++K VLS+GPW F+K+L+VL+SP + M F
Sbjct: 61 VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120
Query: 121 KYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPI 180
+C F IQIHN+ + + E LG G V+EI+ DG + W GP +R+R+ I++ +P+
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180
BLAST of Sed0022475 vs. ExPASy TrEMBL
Match:
A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 1.0e-21
Identity = 61/184 (33.15%), Postives = 102/184 (55.43%), Query Frame = 0
Query: 1 MDEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMKT 60
MDEI E W+ LT+++ I ++ ++ N K+ +++ ++VEAFR VMK+
Sbjct: 1 MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60
Query: 61 I----RCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKF 120
+ I N +++ +K+ VL++GPW+F+ +L+VL+SP ++ M F
Sbjct: 61 LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120
Query: 121 KYCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPI 176
+ IQIH + Q + K LG G V+EID +G EW GP +R+R+ I+I +P
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPF 180
BLAST of Sed0022475 vs. ExPASy TrEMBL
Match:
A0A5C7IMZ7 (DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005566 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 5.5e-20
Identity = 66/192 (34.38%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 2 DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK-- 61
+E+ + + L L EKE + L E + L +A K+LS++ VN +AF VM
Sbjct: 5 EEVAKLCEALTLKEKEGPLMQLQEGMTNKGEKRLALRLAGKLLSSKPVNRDAFMAVMPKI 64
Query: 62 --TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKFK 121
TI F I + NT +N D+ +L+ GPW+FDK L+VL PK M F
Sbjct: 65 WVTIDGFDIEIIDGNTFSFTFKNEKDQLRILNRGPWSFDKALLVLVEPKGKGDTQDMSFN 124
Query: 122 YCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQ 181
F +QIH V + T E + +GN G VKEID G ++VG +R+R+ I+I +P++
Sbjct: 125 RVAFWVQIHRVPLICMTSEIGRAVGNMIGEVKEIDDGGSGDYVGKYIRVRVIIDINQPLR 184
Query: 182 RGLFLKNVKAGE 185
L + ++ G+
Sbjct: 185 HILRVDVLRDGK 196
BLAST of Sed0022475 vs. ExPASy TrEMBL
Match:
A0A5C7GYE2 (DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024961 PE=4 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19
Identity = 66/198 (33.33%), Postives = 102/198 (51.52%), Query Frame = 0
Query: 2 DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEA---FRGVM 61
+E+V + L L EKE + L +N + L + K+LS MVN EA F +
Sbjct: 4 EEVVRLCEALLLKEKEGPLMPLRKNMKNDGERRLGLRLTCKLLSANMVNREAFCVFLRIW 63
Query: 62 KTIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKFKY 121
+T+ C + + N +N D+ VL+ GPW+FDK L+VL +P I GM+F
Sbjct: 64 RTLECVDVEVINGNIFSFTFKNDRDRQHVLNGGPWSFDKALLVLEAPVGKGDIQGMQFNR 123
Query: 122 CPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQR 181
F IQIHN+ + T E + L G VKEID + VG +R+R+ IN+ P++R
Sbjct: 124 VVFWIQIHNIPLLCMTSEIGQFLSGMIGEVKEIDIGKTGKCVGKYIRVRVVINVDVPLRR 183
Query: 182 GLFLKNVKAGEFGALCIM 192
L + ++ G+ + +M
Sbjct: 184 ILRVDIMQDGKEIVMMLM 201
BLAST of Sed0022475 vs. ExPASy TrEMBL
Match:
A0A5C7IND8 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005553 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 65/192 (33.85%), Postives = 99/192 (51.56%), Query Frame = 0
Query: 2 DEIVERWQKLDLTEKESVGIDLNENCCALSKGNFHLNVAAKILSNQMVNVEAFRGVMK-- 61
+E+ + + L L EKE + L E + L +A K+LS++ VN +AF +M
Sbjct: 5 EEVAKLCEALTLKEKEGPLMQLQEGMTNKGEKRLALRLAGKLLSSKPVNRDAFMAMMPKI 64
Query: 62 --TIRCFFIRKLKSNT-----QNLNDKDGVLSNGPWNFDKTLVVLSSPKESESIGGMKFK 121
TI F I + NT +N D+ +L+ PW+FDK L+VL PK I M F
Sbjct: 65 WVTIDGFDIEIIDGNTFSFTFKNEKDRLRILNGEPWSFDKALLVLVEPKGKRDIQDMSFN 124
Query: 122 YCPFLIQIHNVSVQNPTIEAVKRLGNTNGHVKEIDWDGVNEWVGPVLRIRISINIQEPIQ 181
F +QIH V + T E + LGN G VKEID G + VG + +R+ I+I +P++
Sbjct: 125 RVAFWVQIHRVPLICMTSEIGRALGNMIGEVKEIDDGGSGDCVGKYICVRVIIDINQPLR 184
Query: 182 RGLFLKNVKAGE 185
L + ++ G+
Sbjct: 185 HILRVDVLRDGK 196
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1D765 | 6.8e-26 | 35.11 | uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
| A0A6J1DP89 | 1.0e-21 | 33.15 | uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
| A0A5C7IMZ7 | 5.5e-20 | 34.38 | DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005566 ... | [more] |
| A0A5C7GYE2 | 1.6e-19 | 33.33 | DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024961 ... | [more] |
| A0A5C7IND8 | 1.4e-18 | 33.85 | CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00555... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
