Sed0022446 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCGTCGATTCACCATCCGTGCACTAACTCGCATAAATATTCACACAAAACAAATATTTCCCAACAAAAAGGAAAAAAAAAATCATAAATTTCAATAGCTAAGTTCTAATTCAACCAGTGAAGAACTCGGCCGGAAACCGCCCACATCCACGGCCCCGATTGCAGAAAGTGGAAAAAAAGACTCTACAAAAGAAATTGTGGAATAGTAATCGAAGAAGAAGAAGAGAGCTTTCGAGTATGAAGCCACCGGCGAAGCCGATATCGAGTCCAGGCCGGCCGGAGAAATTTCCGCCGCCATTAATGAGATTTTTGAGGAGCAATGTGGGAAGCAAAAGCAGAGGAAGGCGTTCAAGCCCGATGATGTTCATGAGGAAGAAGAACACCGCCGCCGCCATTGAAACCCAAGAGCCTTCTTCCCCAAAAGTCACTTGCATCGGCCAAGTCCGAGTTCGCCGCCGCCGCCATGCTCCCACGCGCCGCCGTTGCCGCTGGTTTCAAACTGCTCTGTTCTGGCCCTGTTTTCGACGAAAATCCAAACCCAATTCTTCTCCGATTTTTCAGAGATGGGCTTCGTTTTTCCGAGCTGGGTTTCGTCGAAAACCCAAAGTTAGAACGAATTCGCCGCCGCGTGAAGCCCCTTTCCATGGCGGAATTGAAATTTCATACTCAGAAACCCAAGTTTCCACCGGTTCCAGCGACGACGATGAAGAAGCAAAAGCCAAAGTGTTAATTTCTTCTAATTCTTCACCGCCTAAAAATGCTTTGTTATTAACGAGATGCAGATCTGCTCCATATCGATCTACATCATTAGCGAGTAGATTTTGGGGCTCTCCTCTGAGAAACGAGGAAAATCAGGAACAAGAAGAAGAACAGAGTTCAAAGCCCAACAATGGCGAAAAAACGGCCGAAATTGAGAAACCCACATCCCAAAGAGCCTCAGTTTCGGATCAAGATCCAAGTGGGGGCTTAGAATTCGAAAATGACGATGAATTCGTGAAGAACATTGAGAATTCAATCGAAGAAAGAATCGTCAAATCCGCCAGCATCGAACGGGGAAAAACAGGGGAAGAAGGTATTGGCGGCTCATCTCGGCCGTTGATTTTGACACGTTGCAAATCAGCGCCGTCGCGAACGGCGGAGAAGATGAACCCAGAAATGGGATTCTGGAAAAAGAGAAGGTTGGGGATTCCTGATTCCTTCTTACCAAACAATTTATGATATAATTTCTTTTTTTAAAAAAAAAAAAGCTTTAAATATTTTTCTCATTACCATCTCAATTTTTTTTACTCGAAAATTGAAAATTTTATTTTTGTTTTGTTTTAGTTTATTAGGTTTTGTGTAAATTTTCTCATCTCTGAAGCTGTGGTAGAGAATCTCCAAGGCTTCAGGCTCAACATGAAGTTAAAAAAAGAAACTTTTTATGATATGGAAATTGTGAAAATTTATCATGGGTTTTGTTCATTGTCCTTTACTTTTTTTTTTTTTTAGTATTCTTATACCTATTTGGGTTTCAATGGAATAGTATATGTCTTGATTAATTGAGTTGTCGATTTTCTTTCATTTAAAGCTCTTCTATATTTAATGCCATCCCTCAACATTGTATACCATTGCATCCATTACTTCCAAAAAAAAAAAACATTGCATCAATTAAGACAATAAATTTAAATATCAATAATATGATAACTTGAGCTATGAATAAGTACACAATAACAGGAAGGATTACAATATACACATACACGTATAAATCTAGAGGTTATGAAGTTGGTTGAACTAAAAAAAAATAATGATAATGATAATAACACCCAATATTTTAGCATTGCCTCAAACAGCCAATTAGCTATTAGAGTCAACTCATACCAACCCATGTTGGTGTTTCAAAAGCTGATTTGGGTGTTTTTGAGCTATTTTGAATGAGATGAATTGACAATTGAAATAAATGAGTTTTGGTTTTGGGTATTTAAGAACATGTTGTGACTTGTAGGAGTGATGGATTTAAATAAAGCATCTTTGGATACTCTGAGTGGGTTTTAATTTTAAAATATTTAGTGGGTCAGAAGACCCACCTCCCCTTTTTATTACAATTTTCATTGGTTTCCTTCACATGTCTTTGTCTTTTTTATATTTCTTTCCTCTTTTTTTCTTCTTCTTCTTCTTCACTCTACCCTCCATGTTTGTCTCTCTTTACACTTGGAATTTCTGCACTATCTAATTAAAAGTTTACTTAGTAACAATTGCGTTACTTGCTTTTGAGTAATATCAGTTTTTGAGTAATTTTTTAAGTATAACAAATGTGGATGGGAATGGAACCTAAAAATTTGAGAGTTAATAGTAGCTAAATTGTGTTGTGTATTGAAAATCCAATTTGGGTTTAGTAAGTTATTTCTGGTCGAACTATAATAACTACATTTTCTTTTCTTTTCTTTTTAATCAAATTTGAGAATAAACATGTCCAAACTTTGCCTTGAAGAATGACTGAATGAGCCATTAATCCCATATTAGTTAAATATATATATTTGATCTCACATTTTATTTTAACCTTGTCTTTTGAATTTTCTTTTTTACTTATTTTCTTTTAAAAAATAAATCCATGTCAA GCCGTCGATTCACCATCCGTGCACTAACTCGCATAAATATTCACACAAAACAAATATTTCCCAACAAAAAGGAAAAAAAAAATCATAAATTTCAATAGCTAAGTTCTAATTCAACCAGTGAAGAACTCGGCCGGAAACCGCCCACATCCACGGCCCCGATTGCAGAAAGTGGAAAAAAAGACTCTACAAAAGAAATTGTGGAATAGTAATCGAAGAAGAAGAAGAGAGCTTTCGAGTATGAAGCCACCGGCGAAGCCGATATCGAGTCCAGGCCGGCCGGAGAAATTTCCGCCGCCATTAATGAGATTTTTGAGGAGCAATGTGGGAAGCAAAAGCAGAGGAAGGCGTTCAAGCCCGATGATGTTCATGAGGAAGAAGAACACCGCCGCCGCCATTGAAACCCAAGAGCCTTCTTCCCCAAAAGTCACTTGCATCGGCCAAGTCCGAGTTCGCCGCCGCCGCCATGCTCCCACGCGCCGCCGTTGCCGCTGGTTTCAAACTGCTCTGTTCTGGCCCTGTTTTCGACGAAAATCCAAACCCAATTCTTCTCCGATTTTTCAGAGATGGGCTTCGTTTTTCCGAGCTGGGTTTCGTCGAAAACCCAAAGTTAGAACGAATTCGCCGCCGCGTGAAGCCCCTTTCCATGGCGGAATTGAAATTTCATACTCAGAAACCCAAGTTTCCACCGGTTCCAGCGACGACGATGAAGAAGCAAAAGCCAAAGTGTTAATTTCTTCTAATTCTTCACCGCCTAAAAATGCTTTGTTATTAACGAGATGCAGATCTGCTCCATATCGATCTACATCATTAGCGAGTAGATTTTGGGGCTCTCCTCTGAGAAACGAGGAAAATCAGGAACAAGAAGAAGAACAGAGTTCAAAGCCCAACAATGGCGAAAAAACGGCCGAAATTGAGAAACCCACATCCCAAAGAGCCTCAGTTTCGGATCAAGATCCAAGTGGGGGCTTAGAATTCGAAAATGACGATGAATTCGTGAAGAACATTGAGAATTCAATCGAAGAAAGAATCGTCAAATCCGCCAGCATCGAACGGGGAAAAACAGGGGAAGAAGGTATTGGCGGCTCATCTCGGCCGTTGATTTTGACACGTTGCAAATCAGCGCCGTCGCGAACGGCGGAGAAGATGAACCCAGAAATGGGATTCTGGAAAAAGAGAAGGTTGGGGATTCCTGATTCCTTCTTACCAAACAATTTATGATATAATTTCTTTTTTTAAAAAAAAAAAAGCTTTAAATATTTTTCTCATTACCATCTCAATTTTTTTTACTCGAAAATTGAAAATTTTATTTTTGTTTTGTTTTAGTTTATTAGGTTTTGTGTAAATTTTCTCATCTCTGAAGCTGTGGTAGAGAATCTCCAAGGCTTCAGGCTCAACATGAAGTTAAAAAAAGAAACTTTTTATGATATGGAAATTGTGAAAATTTATCATGGGTTTTGTTCATTGTCCTTTACTTTTTTTTTTTTTTAGTATTCTTATACCTATTTGGGTTTCAATGGAATAGTATATGTCTTGATTAATTGAGTTGTCGATTTTCTTTCATTTAAAGCTCTTCTATATTTAATGCCATCCCTCAACATTGTATACCATTGCATCCATTACTTCCAAAAAAAAAAAACATTGCATCAATTAAGACAATAAATTTAAATATCAATAATATGATAACTTGAGCTATGAATAAGTACACAATAACAGGAAGGATTACAATATACACATACACGTATAAATCTAGAGGTTATGAAGTTGGTTGAACTAAAAAAAAATAATGATAATGATAATAACACCCAATATTTTAGCATTGCCTCAAACAGCCAATTAGCTATTAGAGTCAACTCATACCAACCCATGTTGGTGTTTCAAAAGCTGATTTGGGTGTTTTTGAGCTATTTTGAATGAGATGAATTGACAATTGAAATAAATGAGTTTTGGTTTTGGGTATTTAAGAACATGTTGTGACTTGTAGGAGTGATGGATTTAAATAAAGCATCTTTGGATACTCTGAGTGGGTTTTAATTTTAAAATATTTAGTGGGTCAGAAGACCCACCTCCCCTTTTTATTACAATTTTCATTGGTTTCCTTCACATGTCTTTGTCTTTTTTATATTTCTTTCCTCTTTTTTTCTTCTTCTTCTTCTTCACTCTACCCTCCATGTTTGTCTCTCTTTACACTTGGAATTTCTGCACTATCTAATTAAAAGTTTACTTAGTAACAATTGCGTTACTTGCTTTTGAGTAATATCAGTTTTTGAGTAATTTTTTAAGTATAACAAATGTGGATGGGAATGGAACCTAAAAATTTGAGAGTTAATAGTAGCTAAATTGTGTTGTGTATTGAAAATCCAATTTGGGTTTAGTAAGTTATTTCTGGTCGAACTATAATAACTACATTTTCTTTTCTTTTCTTTTTAATCAAATTTGAGAATAAACATGTCCAAACTTTGCCTTGAAGAATGACTGAATGAGCCATTAATCCCATATTAGTTAAATATATATATTTGATCTCACATTTTATTTTAACCTTGTCTTTTGAATTTTCTTTTTTACTTATTTTCTTTTAAAAAATAAATCCATGTCAA ATGAAGCCACCGGCGAAGCCGATATCGAGTCCAGGCCGGCCGGAGAAATTTCCGCCGCCATTAATGAGATTTTTGAGGAGCAATGTGGGAAGCAAAAGCAGAGGAAGGCGTTCAAGCCCGATGATGTTCATGAGGAAGAAGAACACCGCCGCCGCCATTGAAACCCAAGAGCCTTCTTCCCCAAAAGTCACTTGCATCGGCCAAGTCCGAGTTCGCCGCCGCCGCCATGCTCCCACGCGCCGCCGTTGCCGCTGGTTTCAAACTGCTCTGTTCTGGCCCTGTTTTCGACGAAAATCCAAACCCAATTCTTCTCCGATTTTTCAGAGATGGGCTTCGTTTTTCCGAGCTGGGTTTCGTCGAAAACCCAAAGTTAGAACGAATTCGCCGCCGCGTGAAGCCCCTTTCCATGGCGGAATTGAAATTTCATACTCAGAAACCCAAGTTTCCACCGGTTCCAGCGACGACGATGAAGAAGCAAAAGCCAAAGTGTTAATTTCTTCTAATTCTTCACCGCCTAAAAATGCTTTGTTATTAACGAGATGCAGATCTGCTCCATATCGATCTACATCATTAGCGAGTAGATTTTGGGGCTCTCCTCTGAGAAACGAGGAAAATCAGGAACAAGAAGAAGAACAGAGTTCAAAGCCCAACAATGGCGAAAAAACGGCCGAAATTGAGAAACCCACATCCCAAAGAGCCTCAGTTTCGGATCAAGATCCAAGTGGGGGCTTAGAATTCGAAAATGACGATGAATTCGTGAAGAACATTGAGAATTCAATCGAAGAAAGAATCGTCAAATCCGCCAGCATCGAACGGGGAAAAACAGGGGAAGAAGGTATTGGCGGCTCATCTCGGCCGTTGATTTTGACACGTTGCAAATCAGCGCCGTCGCGAACGGCGGAGAAGATGAACCCAGAAATGGGATTCTGGAAAAAGAGAAGGTTGGGGATTCCTGATTCCTTCTTACCAAACAATTTATGA MKPPAKPISSPGRPEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNTAAAIETQEPSSPKVTCIGQVRVRRRRHAPTRRRCRWFQTALFWPCFRRKSKPNSSPIFQRWASFFRAGFRRKPKVRTNSPPREAPFHGGIEISYSETQVSTGSSDDDEEAKAKVLISSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNEENQEQEEEQSSKPNNGEKTAEIEKPTSQRASVSDQDPSGGLEFENDDEFVKNIENSIEERIVKSASIERGKTGEEGIGGSSRPLILTRCKSAPSRTAEKMNPEMGFWKKRRLGIPDSFLPNNL Homology
BLAST of Sed0022446 vs. NCBI nr
Match: XP_022145519.1 (uncharacterized protein LOC111014948 [Momordica charantia]) HSP 1 Score: 491.5 bits (1264), Expect = 5.6e-135 Identity = 274/343 (79.88%), Postives = 291/343 (84.84%), Query Frame = 0
BLAST of Sed0022446 vs. NCBI nr
Match: XP_038905723.1 (uncharacterized protein LOC120091683 [Benincasa hispida]) HSP 1 Score: 491.1 bits (1263), Expect = 7.3e-135 Identity = 270/340 (79.41%), Postives = 285/340 (83.82%), Query Frame = 0
BLAST of Sed0022446 vs. NCBI nr
Match: XP_008442665.1 (PREDICTED: uncharacterized protein LOC103486466 [Cucumis melo] >KAA0044023.1 chromo domain-containing protein cec-1 [Cucumis melo var. makuwa] >TYK25117.1 chromo domain-containing protein cec-1 [Cucumis melo var. makuwa]) HSP 1 Score: 489.2 bits (1258), Expect = 2.8e-134 Identity = 268/341 (78.59%), Postives = 290/341 (85.04%), Query Frame = 0
BLAST of Sed0022446 vs. NCBI nr
Match: XP_023005213.1 (uncharacterized protein LOC111498309 [Cucurbita maxima] >XP_023005214.1 uncharacterized protein LOC111498309 [Cucurbita maxima] >XP_023005215.1 uncharacterized protein LOC111498309 [Cucurbita maxima] >XP_023005216.1 uncharacterized protein LOC111498309 [Cucurbita maxima] >XP_023005217.1 uncharacterized protein LOC111498309 [Cucurbita maxima]) HSP 1 Score: 485.0 bits (1247), Expect = 5.2e-133 Identity = 264/344 (76.74%), Postives = 282/344 (81.98%), Query Frame = 0
BLAST of Sed0022446 vs. NCBI nr
Match: KAG6596463.1 (hypothetical protein SDJN03_09643, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028008.1 hypothetical protein SDJN02_09187, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 479.6 bits (1233), Expect = 2.2e-131 Identity = 263/349 (75.36%), Postives = 283/349 (81.09%), Query Frame = 0
BLAST of Sed0022446 vs. ExPASy TrEMBL
Match: A0A6J1CVH2 (uncharacterized protein LOC111014948 OS=Momordica charantia OX=3673 GN=LOC111014948 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.7e-135 Identity = 274/343 (79.88%), Postives = 291/343 (84.84%), Query Frame = 0
BLAST of Sed0022446 vs. ExPASy TrEMBL
Match: A0A5D3DNC1 (Chromo domain-containing protein cec-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002420 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 1.3e-134 Identity = 268/341 (78.59%), Postives = 290/341 (85.04%), Query Frame = 0
BLAST of Sed0022446 vs. ExPASy TrEMBL
Match: A0A1S3B5Q8 (uncharacterized protein LOC103486466 OS=Cucumis melo OX=3656 GN=LOC103486466 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 1.3e-134 Identity = 268/341 (78.59%), Postives = 290/341 (85.04%), Query Frame = 0
BLAST of Sed0022446 vs. ExPASy TrEMBL
Match: A0A6J1KWU4 (uncharacterized protein LOC111498309 OS=Cucurbita maxima OX=3661 GN=LOC111498309 PE=4 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.5e-133 Identity = 264/344 (76.74%), Postives = 282/344 (81.98%), Query Frame = 0
BLAST of Sed0022446 vs. ExPASy TrEMBL
Match: A0A6J1GAY2 (uncharacterized protein LOC111452338 OS=Cucurbita moschata OX=3662 GN=LOC111452338 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 6.9e-131 Identity = 262/350 (74.86%), Postives = 282/350 (80.57%), Query Frame = 0
BLAST of Sed0022446 vs. TAIR 10
Match: AT2G37100.1 (protamine P1 family protein ) HSP 1 Score: 142.9 bits (359), Expect = 4.6e-34 Identity = 119/328 (36.28%), Postives = 169/328 (51.52%), Query Frame = 0
BLAST of Sed0022446 vs. TAIR 10
Match: AT5G03110.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein (TAIR:AT2G37100.1); Has 81 Blast hits to 73 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 126.3 bits (316), Expect = 4.4e-29 Identity = 115/314 (36.62%), Postives = 152/314 (48.41%), Query Frame = 0
BLAST of Sed0022446 vs. TAIR 10
Match: AT3G15095.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9762 Blast hits to 6439 proteins in 764 species: Archae - 77; Bacteria - 1339; Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131; Other Eukaryotes - 3849 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04 Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0
HSP 2 Score: 38.9 bits (89), Expect = 9.3e-03 Identity = 92/352 (26.14%), Postives = 133/352 (37.78%), Query Frame = 0
BLAST of Sed0022446 vs. TAIR 10
Match: AT3G15095.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9396 Blast hits to 6248 proteins in 757 species: Archae - 72; Bacteria - 1337; Metazoa - 3078; Fungi - 696; Plants - 406; Viruses - 135; Other Eukaryotes - 3672 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04 Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0
HSP 2 Score: 32.0 bits (71), Expect = 1.1e+00 Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = 0
BLAST of Sed0022446 vs. TAIR 10
Match: AT3G15095.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04 Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0
HSP 2 Score: 32.3 bits (72), Expect = 8.7e-01 Identity = 30/92 (32.61%), Postives = 44/92 (47.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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