Sed0022418 (gene) Chayote v1

Overview
NameSed0022418
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRING-type E3 ubiquitin transferase
LocationLG04: 26232739 .. 26235608 (+)
RNA-Seq ExpressionSed0022418
SyntenySed0022418
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAATTTCAAATCATCTCTCTATTATATCCATAAACCCCATTCAAAACTTTCGGTCCATCTTTCTCATTTCAGCCCTCGATCATGGCATCCTCCTTGTATTCATTTGCACGCACTTCCACGCATTCGGCCACCGCCGCCCCTTTTCCGCCCTCCAACCGCCCCATGAGACCGCCCGCGCTGTCCCTCCTCCAGAAGAAGAGAGCTTCTACCATTGTCGCCGCCGTTGGCGACGTCTCCGCCGCCGGCACCACCTATCTGATCGCCGGCGCCGTCGCTGTGGCCCTCGTCGGTACCGCCTTTCCTATCTTTTTCTCTCGCAAAGATCTGTAAGTCAATTCTCTACTACTTCTAAAACCCAGTTCCAATTAAAATTAGGGATAATTAATTAAATTTAAAAATATAAATTATATATGTGACACAAACATGTGGCTGGAAGAAAATTTAGAATGTAGTACGCGTACTTCATACATGTTTGGGCACAATTTGAATTGCTAGGAAAATCATTATTATTAGTAATGGCTAACATACATAAGGTTCATTTAAATATAGTTATTCCTAATTTAATCTAAACATACTATTCTACTCGATCACTATACTCCAGCATTCTTACCCATTCGAATAGTGATCTAATTAAACCATTTATGAAAAATTAAGGGTAAATATTCAAAAACTTTTGAAATGTAGATTTTTTTTAAAAAAAATAATGGAAAAAAGATAATATAGGTCTAAGCATAACTCAATTGATATTATATATTATATACCAAACAATTGTGGTTGTAGTCCTCCAATACCTCAAAAAAAGAAATGTTAATATATATATATATATATATTTATTTTATTTTTTTCTTGTTCAACAACATCTAAGATTTGAACTCATAATGATGTCAAAATAAAAAGATGAATTGATTGGAGTACAACTCATTTTGGGCTTAATATAATGCATATAACTAGGCCATATTTTAAATGTTGTTGTCATGTGTCTTTATTTTGTTCAATGGCATGGATGTTGAAGACAAAAAGAAAATTCGATTTTTTATCCTTCTAATGAAGAGGTATATGTATAAATAAGTTTTTTTTATCAGTTAATAGATAAGTTTAATTATATTTCGTTAATTATATGTATATATTTAATAATTAAAAGGTCATGAGTTCGAATCATTTATCATAGTTTTTGTATAATTAAAGATTTTTTGTTATATATTCCATAAATTGTCCCATTTTACTCCTACTAAATATCATGTATTTGTTTTTCGATTTTTCATCTAAAAAAACAGATGAAAATTTTAATGGGGAACGTCTAGCTAGAATCTTAATAATGTTCCCATTCACTTGAAAATAATTGTGAAACAAAAATAACAAGTTTCATTCAAAGGTTTAAAGGGACTCTTAAAACTTTAATGAGCTAGCAATGGCGGCGATCGGTTTTTGTGACCGTGGTCCTGCACAGGTGTCCGGAGTGCGACGGCGCAGGGTTTGTCCGGAAGTCGGGGGCGGCGCTGAGGGCGAATGCGGCTCGTAAAGACCAAATTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAATCAAGTCGACAAATAAGTTTAAAAGGTTTAAATACTATCTTCATTTTTTATATTTTGAGTTTTATTCTATTTTGATCCTCCAACAACTTCAGTCCATCGACATATAAAAGAAGATTTTTTTAAAAAGAACTTAAAATTCATTCATTTAAAAATATGTTCCATTTTGTTCTTATTTGCACTAAAATTATGGGAAATTTTTACATGTATAACAAAAAAAAAATCAAAAAATATTGTCTATACCCTTTTTAAAAAAAATAATTTAGCAGAAAATTTGGCCAATCACGATAAAATGACTAAAATACTCTCGCTTCAATTAATTCATTGACAACTTTGATAATCATCTATTAAGGGAAAAATTGAAAAAAAAATACTCTACCTAAATCGGTTATACATGTATTGTTTTTTTTATAAAAAAAAAAGGTGCTATAATTATAAATGACAAGAAAGAATTGTTATGTGAAACAATTTTTCTAAAATTATTAATATCATGGATCAAATTTCATTAATATTAACTTCAAATGTATCTTATGAATTAATTTTAAGTTTTTTTTTAATTACGGGGACTAAAATTTGACAATTTAAAATTTGTGGATCAAAATTGGTATAAAACTTGAAATATAAAAACTAAAATAGTATTTTTAACCTATTTTAATCTTGTTTTTTCGGCAGCTTTGGTGTCATTATTAAATATACATACTTTATTAATGTGGTTGTAATAATGTATTTGAGGCTTGTATAACATCTTAGACCGTATTTCACACCCTAATAATTTAGTTCACAAATCTCTCAAAAGAATGTCACAATTATGTTTCTTTGAATTAATTTTTTATAATAAATTTGATTGGAAATAATAGTACATAAGTGCACGAAACTGTGATTTTGATCGAAAACTAAAGTCGAATGAATTATTTTCACATGTTTCAACTACTACAAAAAGTTTAATCTAAGGACATTGCTGAAAGAAAAGATATGTAAAATCTTAAATGTTATAAATAACAAATTTCAGACCAAAAATATGTTTTAACAAATAAAATAGTTGCAAATTTTCACGTCTCGGTATATTGTACCATTGGTTTTATGTATAACATTTGGATGACATTCTTAGATAAATAATAAGTTTTTCTTGCAATTAATGTACACATTTCCGGTACATGACCGTTGTCAAGGAATGAAATTTCATTTGTTGACCTAAGAGAAATCAAATCAAGCACCAACATATTATATGAAGGCATTTGTTATATGCAAATTTGAAATTTGTGGAAATTTTGAATAATATTAAAAGTATATTAGACACGGAA

mRNA sequence

TTCAATTTCAAATCATCTCTCTATTATATCCATAAACCCCATTCAAAACTTTCGGTCCATCTTTCTCATTTCAGCCCTCGATCATGGCATCCTCCTTGTATTCATTTGCACGCACTTCCACGCATTCGGCCACCGCCGCCCCTTTTCCGCCCTCCAACCGCCCCATGAGACCGCCCGCGCTGTCCCTCCTCCAGAAGAAGAGAGCTTCTACCATTGTCGCCGCCGTTGGCGACGTCTCCGCCGCCGGCACCACCTATCTGATCGCCGGCGCCGTCGCTGTGGCCCTCGTCGGTACCGCCTTTCCTATCTTTTTCTCTCGCAAAGATCTGTGTCCGGAGTGCGACGGCGCAGGGTTTGTCCGGAAGTCGGGGGCGGCGCTGAGGGCGAATGCGGCTCGTAAAGACCAAATTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAATCAAGTCGACAAATAAGTTTAAAAGGTTTAAATACTATCTTCATTTTTTATATTTTGAGTTTTATTCTATTTTGATCCTCCAACAACTTCAGTCCATCGACATATAAAAGAAGATTTTTTTAAAAAGAACTTAAAATTCATTCATTTAAAAATATGTTCCATTTTGTTCTTATTTGCACTAAAATTATGGGAAATTTTTACATGTATAACAAAAAAAAAATCAAAAAATATTGTCTATACCCTTTTTAAAAAAAATAATTTAGCAGAAAATTTGGCCAATCACGATAAAATGACTAAAATACTCTCGCTTCAATTAATTCATTGACAACTTTGATAATCATCTATTAAGGGAAAAATTGAAAAAAAAATACTCTACCTAAATCGGTTATACATGTATTGTTTTTTTTATAAAAAAAAAAGGTGCTATAATTATAAATGACAAGAAAGAATTGTTATGTGAAACAATTTTTCTAAAATTATTAATATCATGGATCAAATTTCATTAATATTAACTTCAAATGTATCTTATGAATTAATTTTAAGTTTTTTTTTAATTACGGGGACTAAAATTTGACAATTTAAAATTTGTGGATCAAAATTGGTATAAAACTTGAAATATAAAAACTAAAATAGTATTTTTAACCTATTTTAATCTTGTTTTTTCGGCAGCTTTGGTGTCATTATTAAATATACATACTTTATTAATGTGGTTGTAATAATGTATTTGAGGCTTGTATAACATCTTAGACCGTATTTCACACCCTAATAATTTAGTTCACAAATCTCTCAAAAGAATGTCACAATTATGTTTCTTTGAATTAATTTTTTATAATAAATTTGATTGGAAATAATAGTACATAAGTGCACGAAACTGTGATTTTGATCGAAAACTAAAGTCGAATGAATTATTTTCACATGTTTCAACTACTACAAAAAGTTTAATCTAAGGACATTGCTGAAAGAAAAGATATGTAAAATCTTAAATGTTATAAATAACAAATTTCAGACCAAAAATATGTTTTAACAAATAAAATAGTTGCAAATTTTCACGTCTCGGTATATTGTACCATTGGTTTTATGTATAACATTTGGATGACATTCTTAGATAAATAATAAGTTTTTCTTGCAATTAATGTACACATTTCCGGTACATGACCGTTGTCAAGGAATGAAATTTCATTTGTTGACCTAAGAGAAATCAAATCAAGCACCAACATATTATATGAAGGCATTTGTTATATGCAAATTTGAAATTTGTGGAAATTTTGAATAATATTAAAAGTATATTAGACACGGAA

Coding sequence (CDS)

ATGGCATCCTCCTTGTATTCATTTGCACGCACTTCCACGCATTCGGCCACCGCCGCCCCTTTTCCGCCCTCCAACCGCCCCATGAGACCGCCCGCGCTGTCCCTCCTCCAGAAGAAGAGAGCTTCTACCATTGTCGCCGCCGTTGGCGACGTCTCCGCCGCCGGCACCACCTATCTGATCGCCGGCGCCGTCGCTGTGGCCCTCGTCGGTACCGCCTTTCCTATCTTTTTCTCTCGCAAAGATCTGTGTCCGGAGTGCGACGGCGCAGGGTTTGTCCGGAAGTCGGGGGCGGCGCTGAGGGCGAATGCGGCTCGTAAAGACCAAATTCAGATCGTTTGTGCTCGTTGCAATGGCCTTGGCAAGCTCAATCAAGTCGACAAATAA

Protein sequence

MASSLYSFARTSTHSATAAPFPPSNRPMRPPALSLLQKKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVCARCNGLGKLNQVDK
Homology
[Close]
BLAST of Sed0022418 vs. NCBI nr
Match: XP_023528629.1 (uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-44
Identity = 103/134 (76.87%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 3   SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSA 62
           +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q     +R ST+VAA+GDVSA
Sbjct: 61  ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSA 120

Query: 63  AGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVC 122
            GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR+SGAALRANAARKDQ QIVC
Sbjct: 121 DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC 180

Query: 123 ARCNGLGKLNQVDK 128
           ARCNGLGKLNQVDK
Sbjct: 181 ARCNGLGKLNQVDK 194

[Close]
BLAST of Sed0022418 vs. NCBI nr
Match: XP_023539540.1 (uncharacterized protein LOC111800182 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-44
Identity = 105/133 (78.95%), Postives = 111/133 (83.46%), Query Frame = 0 

Query: 3   SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAA 62
           +SL SF R S+        AAPFPPSNRP+RP ALSL Q    +KR STIVAA+GDVSA 
Sbjct: 2   ASLCSFPRISSADPIKHLAAAPFPPSNRPIRPSALSLRQSSRNQKRTSTIVAAIGDVSAD 61

Query: 63  GTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVCA 122
           GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVRKSGAALRANAARKDQ QIVC+
Sbjct: 62  GTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIVCS 121

Query: 123 RCNGLGKLNQVDK 128
           RCNGLGKLNQVDK
Sbjct: 122 RCNGLGKLNQVDK 134

[Close]
BLAST of Sed0022418 vs. NCBI nr
Match: XP_022935020.1 (uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 uncharacterized protein LOC111442008 [Cucurbita moschata] >KAG6580531.1 hypothetical protein SDJN03_20533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017282.1 hypothetical protein SDJN02_19145 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-44
Identity = 103/134 (76.87%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 3   SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSA 62
           +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q     +R ST+VAA+GDVSA
Sbjct: 2   ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSA 61

Query: 63  AGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVC 122
            GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR+SGAALRANAARKDQ QIVC
Sbjct: 62  DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC 121

Query: 123 ARCNGLGKLNQVDK 128
           ARCNGLGKLNQVDK
Sbjct: 122 ARCNGLGKLNQVDK 135

[Close]
BLAST of Sed0022418 vs. NCBI nr
Match: XP_022983996.1 (uncharacterized protein LOC111482446 [Cucurbita maxima])

HSP 1 Score: 187.6 bits (475), Expect = 6.7e-44
Identity = 104/134 (77.61%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 3   SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQKK----RASTIVAAVGDVSA 62
           +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q      R ST+VAAVGDVSA
Sbjct: 2   ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVSA 61

Query: 63  AGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVC 122
            GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR+SGAALRANAARKDQ QIVC
Sbjct: 62  DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC 121

Query: 123 ARCNGLGKLNQVDK 128
           ARCNGLGKLNQVDK
Sbjct: 122 ARCNGLGKLNQVDK 135

[Close]
BLAST of Sed0022418 vs. NCBI nr
Match: XP_022960729.1 (uncharacterized protein LOC111461414 [Cucurbita moschata])

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43
Identity = 104/133 (78.20%), Postives = 110/133 (82.71%), Query Frame = 0 

Query: 3   SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAA 62
           +SL SF R S+        AAPFPPSN P+RP ALSL Q    +KR STIVAA+GDVSA 
Sbjct: 2   ASLCSFPRISSADPIKHLAAAPFPPSNHPIRPSALSLRQSSRNQKRTSTIVAAIGDVSAD 61

Query: 63  GTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVCA 122
           GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVRKSGAALRANAARKDQ QIVC+
Sbjct: 62  GTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIVCS 121

Query: 123 RCNGLGKLNQVDK 128
           RCNGLGKLNQVDK
Sbjct: 122 RCNGLGKLNQVDK 134

[Close]
BLAST of Sed0022418 vs. ExPASy TrEMBL
Match: A0A6J1F9E5 (uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC111442008 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.3e-44
Identity = 103/134 (76.87%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 3   SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSA 62
           +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q     +R ST+VAA+GDVSA
Sbjct: 2   ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSSKHRRISTVVAAIGDVSA 61

Query: 63  AGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVC 122
            GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR+SGAALRANAARKDQ QIVC
Sbjct: 62  DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC 121

Query: 123 ARCNGLGKLNQVDK 128
           ARCNGLGKLNQVDK
Sbjct: 122 ARCNGLGKLNQVDK 135

[Close]
BLAST of Sed0022418 vs. ExPASy TrEMBL
Match: A0A6J1J3Y5 (uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.3e-44
Identity = 104/134 (77.61%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 3   SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQKK----RASTIVAAVGDVSA 62
           +SL +F R S+      +  AAPFPPSN+PMRP ALSL Q      R ST+VAAVGDVSA
Sbjct: 2   ASLCTFPRISSTEPIKQTPAAAPFPPSNQPMRPSALSLRQSSGKHWRTSTVVAAVGDVSA 61

Query: 63  AGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVC 122
            GTTYLIAGAVAVALVGTAFPI FSRKDLCPECDGAGFVR+SGAALRANAARKDQ QIVC
Sbjct: 62  DGTTYLIAGAVAVALVGTAFPILFSRKDLCPECDGAGFVRRSGAALRANAARKDQTQIVC 121

Query: 123 ARCNGLGKLNQVDK 128
           ARCNGLGKLNQVDK
Sbjct: 122 ARCNGLGKLNQVDK 135

[Close]
BLAST of Sed0022418 vs. ExPASy TrEMBL
Match: A0A6J1HBY8 (uncharacterized protein LOC111461414 OS=Cucurbita moschata OX=3662 GN=LOC111461414 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 104/133 (78.20%), Postives = 110/133 (82.71%), Query Frame = 0 

Query: 3   SSLYSFARTST----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSAA 62
           +SL SF R S+        AAPFPPSN P+RP ALSL Q    +KR STIVAA+GDVSA 
Sbjct: 2   ASLCSFPRISSADPIKHLAAAPFPPSNHPIRPSALSLRQSSRNQKRTSTIVAAIGDVSAD 61

Query: 63  GTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVCA 122
           GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVRKSGAALRANAARKDQ QIVC+
Sbjct: 62  GTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIVCS 121

Query: 123 RCNGLGKLNQVDK 128
           RCNGLGKLNQVDK
Sbjct: 122 RCNGLGKLNQVDK 134

[Close]
BLAST of Sed0022418 vs. ExPASy TrEMBL
Match: A0A6J1I3R1 (uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 106/134 (79.10%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 3   SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQ----KKRASTIVAAVGDVSA 62
           +SL SF R S+     H A AAPFPPSN P RP ALSL Q    +KR STIVAA+GDVSA
Sbjct: 2   ASLCSFPRISSADPIKHPA-AAPFPPSNHPKRPSALSLRQSSRNQKRTSTIVAAIGDVSA 61

Query: 63  AGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVC 122
            GTTYLIAGAVAVALVGTAFPI FSRKDLCP CDGAGFVRKSGAALRANAARKDQ QIVC
Sbjct: 62  DGTTYLIAGAVAVALVGTAFPILFSRKDLCPVCDGAGFVRKSGAALRANAARKDQAQIVC 121

Query: 123 ARCNGLGKLNQVDK 128
           +RCNGLGKLNQVDK
Sbjct: 122 SRCNGLGKLNQVDK 134

[Close]
BLAST of Sed0022418 vs. ExPASy TrEMBL
Match: A0A1S3B5E7 (uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.8e-43
Identity = 101/134 (75.37%), Postives = 110/134 (82.09%), Query Frame = 0 

Query: 3   SSLYSFARTST-----HSATAAPFPPSNRPMRPPALSLLQK----KRASTIVAAVGDVSA 62
           +SL SF R S+      S   APFPPSN P+RP  LSL Q     KR ST+VAAVGDVS+
Sbjct: 2   ASLCSFPRISSTEPIKQSPATAPFPPSNHPIRPSTLSLRQSSRNHKRISTVVAAVGDVSS 61

Query: 63  AGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSGAALRANAARKDQIQIVC 122
            GTTYLIAGA+AVALVGTAFPIFFSRKDLCPEC+GAGFVR+SG+ALRANAARKDQ QIVC
Sbjct: 62  DGTTYLIAGAIAVALVGTAFPIFFSRKDLCPECEGAGFVRRSGSALRANAARKDQTQIVC 121

Query: 123 ARCNGLGKLNQVDK 128
           ARCNGLGKLNQVDK
Sbjct: 122 ARCNGLGKLNQVDK 135

[Close]
BLAST of Sed0022418 vs. TAIR 10
Match: AT5G02160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 8.8e-34
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0 

Query: 37  QKKRASTIVAAVGDVSAAGTTYLIAGAVAVALVGTAFPIFFSRKDLCPECDGAGFVRKSG 96
           ++  +S +VAAVGDVS+ GT YLI GA+AVALVGTAFPI F RKD CPECDGAGFVRK G
Sbjct: 38  KRSSSSVVVAAVGDVSSDGTIYLIGGAIAVALVGTAFPILFKRKDTCPECDGAGFVRKGG 97

Query: 97  AALRANAARKDQIQIVCARCNGLGKLNQVDK 128
             LRANAARKD  QIVCA CNGLGKLNQ+DK
Sbjct: 98  VTLRANAARKDLPQIVCANCNGLGKLNQIDK 128

The following BLAST results are available for this feature:
BLAST of Sed0022418 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023528629.16.7e-4476.87uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo][more]
XP_023539540.16.7e-4478.95uncharacterized protein LOC111800182 [Cucurbita pepo subsp. pepo][more]
XP_022935020.16.7e-4476.87uncharacterized protein LOC111442008 [Cucurbita moschata] >XP_022935021.1 unchar... [more]
XP_022983996.16.7e-4477.61uncharacterized protein LOC111482446 [Cucurbita maxima][more]
XP_022960729.12.6e-4378.20uncharacterized protein LOC111461414 [Cucurbita moschata][more]
BLAST of Sed0022418 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0022418 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F9E53.3e-4476.87uncharacterized protein LOC111442008 OS=Cucurbita moschata OX=3662 GN=LOC1114420... [more]
A0A6J1J3Y53.3e-4477.61uncharacterized protein LOC111482446 OS=Cucurbita maxima OX=3661 GN=LOC111482446... [more]
A0A6J1HBY81.2e-4378.20uncharacterized protein LOC111461414 OS=Cucurbita moschata OX=3662 GN=LOC1114614... [more]
A0A6J1I3R11.6e-4379.10uncharacterized protein LOC111470276 OS=Cucurbita maxima OX=3661 GN=LOC111470276... [more]
A0A1S3B5E72.8e-4375.37uncharacterized protein LOC103486375 OS=Cucumis melo OX=3656 GN=LOC103486375 PE=... [more]
BLAST of Sed0022418 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02160.18.8e-3475.82unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36389OS05G0110100 PROTEINcoord: 17..127
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 73..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0022418.1Sed0022418.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane